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At least 919 records · Page 51Linked to original sources
USGS2011

Stochastic population dynamics in populations of western terrestrial garter snakes with divergent life histories

Comparative evaluations of population dynamics in species with temporal and spatial variation in life‐history traits are rare because they require long‐term demographic time series from multiple populations. We present such an analysis using demographic data collected during the interval 1978–1996 for six populations of western terrestrial garter snakes ( Thamnophis elegans ) from two evolutionarily divergent ecotypes. Three replicate populations from a slow‐living ecotype, found in mountain meadows of northeastern California, were characterized by individuals that develop slowly, mature late, reproduce infrequently with small reproductive effort, and live longer than individuals of three populations of a fast‐living ecotype found at lakeshore locales. We constructed matrix population models for each of the populations based on 8–13 years of data per population and analyzed both deterministic dynamics based on mean annual vital rates and stochastic dynamics incorporating annual variation in vital rates. (1) Contributions of highly variable vital rates to fitness (λ s ) were buffered against the negative effects of stochastic variation, and this relationship was consistent with differences between the meadow (M‐slow) and lakeshore (L‐fast) ecotypes. (2) Annual variation in the proportion of gravid females had the greatest negative effect among all vital rates on λ s . The magnitude of variation in the proportion of gravid females and its effect on λ s was greater in M‐slow than L‐fast populations. (3) Variation in the proportion of gravid females, in turn, depended on annual variation in prey availability, and its effect on λ s was 4–23 times greater in M‐slow than L‐fast populations. In addition to differences in stochastic dynamics between ecotypes, we also found higher mean mortality rates across all age classes in the L‐fast populations. Our results suggest that both deterministic and stochastic selective forces have affected the evolution of divergent life‐history traits in the two ecotypes, which, in turn, affect population dynamics. M‐slow populations have evolved life‐history traits that buffer fitness against direct effects of variation in reproduction and that spread lifetime reproduction across a greater number of reproductive bouts. These results highlight the importance of long‐term demographic and environmental monitoring and of incorporating temporal dynamics into empirical studies of life‐history evolution.

California↗
USGS2003

Importance of a stochastic distribution of floods and erosion thresholds in the bedrock river incision problem

Fluvial erosion of bedrock occurs during occasional flood events when boundary shear stress exceeds a critical threshold to initiate incision. Therefore efforts to model the evolution of topography over long timescales should include an erosion threshold and should be driven by a stochastic distribution of erosive events. However, most bedrock incision models ignore the threshold as a second‐order detail. In addition, climate is poorly represented in most landscape evolution models, so the quantitative relationship between erosion rate and measurable climatic variables has been elusive. Here we show that the presence of an erosion threshold, when combined with a well‐constrained, probabilistic model of storm and flood occurrence, has first‐order implications for the dynamics of river incision in tectonically active areas. First, we make a direct calculation of the critical shear stress required to pluck bedrock blocks for a field site in New York. Second, we apply a recently proposed stochastic, threshold, bedrock incision model to a series of streams in California, with known tectonic and climatic forcing. Previous work in the area has identified a weak relationship between channel gradient or relief and rock uplift rate that is not easily explained by simpler detachment‐limited models. The results with the stochastic threshold model show that even low erosion thresholds, which are exceeded in steep channels during high‐frequency flood events, fundamentally affect the predicted relationship between gradient and uplift rate in steady state rivers, in a manner consistent with the observed topography. This correspondence between theory and data is, however, nonunique; models in which a thin alluvial cover may act to inhibit channel incision in the low uplift rate zone also provide plausible explanations for the observed topography. Third, we explore the broader implications of the stochastic threshold model to the development of fluvial topography in active tectonic settings. We suggest that continued field applications of geomorphic models, including physically meaningful thresholds and stochastic climate distributions, are required to advance our knowledge of interactions among surficial, climatic, and crustal processes.

California↗
USGS2021

Identifying mismatches between conservation area networks and vulnerable populations using spatial randomization

Grassland birds are among the most globally threatened bird groups due to substantial degradation of native grassland habitats. However, the current network of grassland conservation areas may not be adequate for halting population declines and biodiversity loss. Here, we evaluate a network of grassland conservation areas within Wisconsin, U.S.A., that includes both large Focal Landscapes and smaller targeted conservation areas (e.g., Grassland Bird Conservation Areas, GBCAs) established within them. To date, this conservation network has lacked baseline information to assess whether the current placement of these conservation areas aligns with population hot spots of grassland-dependent taxa. To do so, we fitted data from thousands of avian point-count surveys collected by citizen scientists as part of Wisconsin's Breeding Bird Atlas II with multinomial N -mixture models to estimate habitat–abundance relationships, develop spatially explicit predictions of abundance, and establish ecological baselines within priority conservation areas for a suite of obligate grassland songbirds. Next, we developed spatial randomization tests to evaluate the placement of this conservation network relative to randomly placed conservation networks. Overall, less than 20% of species statewide populations were found within the current grassland conservation network. Spatial tests demonstrated a high representation of this bird assemblage within the entire conservation network, but with a bias toward birds associated with moderately tallgrasses relative to those associated with shortgrasses or tallgrasses. We also found that GBCAs had higher representation at Focal Landscape rather than statewide scales. Here, we demonstrated how combining citizen science data with hierarchical modeling is a powerful tool for estimating ecological baselines and conducting large-scale evaluations of an existing conservation network for multiple grassland birds. Our flexible spatial randomization approach offers the potential to be applied to other protected area networks and serves as a complementary tool for conservation planning efforts globally.

Wisconsin↗
USGS2020

Genotyping-by-sequencing illuminates high levels of divergence among sympatric forms of coregonines in the Laurentian Great Lakes

Effective resource management depends on our ability to partition diversity into biologically meaningful units. Recent evolutionary divergence, however, can often lead to ambiguity in morphological and genetic differentiation, complicating the delineation of valid conservation units. Such is the case with the "coregonine problem," where recent postglacial radiations of coregonines into lacustrine habitats resulted in the evolution of numerous species flocks, often with ambiguous taxonomy. The application of genomics methods is beginning to shed light on this problem and the evolutionary mechanisms underlying divergence in these ecologically and economically important fishes. Here, we used restriction site-associated DNA (RAD) sequencing to examine genetic diversity and differentiation among sympatric forms in the Coregonus artedi complex in the Apostle Islands of Lake Superior, the largest lake in the Laurentian Great Lakes. Using 29,068 SNPs, we were able to clearly distinguish among the three most common forms for the first time, as well as identify putative hybrids and potentially misidentified specimens. Population assignment rates for these forms using our RAD data were 93%-100% with the only mis-assignments arising from putative hybrids, an improvement from 62% to 77% using microsatellites. Estimates of pairwise differentiation ( F ST : 0.045-0.056) were large given the detection of hybrids, suggesting that reduced fitness of hybrid individuals may be a potential mechanism for the maintenance of differentiation. We also used a newly built C. artedi linkage map to look for islands of genetic divergence among forms and found widespread differentiation across the genome, a pattern indicative of long-term drift, suggesting that these forms have been reproductively isolated for a substantial amount of time. The results of this study provide valuable information that can be applied to develop well-informed management strategies and stress the importance of re-evaluating conservation units with genomic tools to ensure they accurately reflect species diversity.

Wisconsin↗
USGS2015

Geochemical, modal, and geochronologic data for 1.4 Ga A-type granitoid intrusions of the conterminous United States

Introduction The purpose of this report is to present available geochemical, modal, and geochronologic data for approximately 1.4 billion year (Ga) A-type granitoid intrusions of the United States and to make those data available to ongoing petrogenetic investigations of these rocks. A-type granites, as originally defined by Loiselle and Wones (1979), are iron-enriched granitoids (synonymous with the ferroan granitoids of Frost and Frost, 2011) that occur in an anorogenic, within-continent setting. Relative to other granitic rocks, A-type granites have high FeO*/(FeO*+MgO), high K 2 O and K 2 O/Na 2 O, are metaluminous to weakly peraluminous, and are enriched in incompatible trace elements. Loiselle and Wones (1979) further suggested that A-type granites are relatively anhydrous. Anderson (1983) provides an early compilation of data for the products of 1.4 Ga magmatism in North America and notes the spatial and temporal association of a trio of rock types, which includes gabbro to anorthosite, intermediate composition mangerite, and granitic rapakivi rocks. In North America, the majority of known A-type intrusions were emplaced between 1.5 and 1.3 Ga and are predominantly of the granitic variety (Anderson, 1983). This report addresses the broadly Mesoproterozoic-age granitic rocks of the conterminous United States. Constituents of this group of intrusive rocks were defined using a variety of spatial, compositional, and geochronologic metrics. Thomas and others (2012) provided an updated synthesis, largely based on new isotopic and geochronologic data (for example, Fisher and others, 2010), for the large-scale geologic and tectonic evolution of the eastern United States. Their findings suggest that the basement rocks of the central and southern Appalachian region are allochthonous relative to the remainder of Laurentia and were accreted along the Grenville front between 1.25 and 1.0 Ga. Accordingly, Mesoproterozoic rocks east of the Grenville front and south of the approximate latitude of New York City do not represent North American magmatism. Consequently, geochemical, modal, and geochronologic data for these rocks are not included in the compilation described herein. Further, the structural styles and compositions of granitoid rocks east of the Grenville front, mostly highly deformed gneissic rocks, are dissimilar to those characteristic of the A-type granitoid rocks described herein. A variety of compositional and age information further characterizes the 1.4 Ga A-type granitoid rocks in the conterminous United States. Most samples included in this compilation have felsic compositions, although some extend to intermediate compositions. SiO2 contents range from 56 to almost 78 weight percent, and median and mean SiO2 contents are 72.0 and 71.1 weight percent, respectively. The majority of these rocks for which modal data are available are composed of monzogranite (Streckeisen, 1976), although the dataset also contains many samples composed of granodiorite and syenogranite. A smaller group of the granitoid rocks in this dataset are composed of quartz monzodiorite and quartz monzonite, and a very small subset of samples is composed of alkali-feldspar granite, tonalite, alkali-feldspar quartz syenite, and quartz syenite (fig. 1). Many of the 1.4 Ga granitoid rocks are further characterized by medium- to coarse-grain size and are also conspicuously porphyritic; alkali feldspar phenocrysts or megacrysts (2–10 cm), often with rapakivi overgrowths, are a common feature of many of these rocks (Anderson, 1983; Anderson and Bender, 1989; Anderson and Cullers, 1978; Condie and Budding, 1979). The age of A-type magmatism in North America ranges from about 1.8 to 1.0 Ga, although Anderson (1983) suggests that more than 70 percent (by volume) of A-type magmatism in this region occurred between 1.49 and 1.41 Ga. In the conterminous United States, ages of A-type granitoid rocks are restricted to the period between about 1.49 and 1.33 Ga (Anderson, 1983; Bauer and Pollock, 1993; Bickford and Mose, 1975; Bickford, Harrower, and others, 1981; Bickford and others, 1989; Dewane and Van Schmus, 2007; Hoppe and others, 1983; Peterman and Hedge, 1968; Van Schmus and Bickford, 1981; Van Schmus and others, 1975). Using these recognition criteria, we identified A-type granitoid intrusions of the conterminous United States; for those intrusions, we compiled available geochemical, modal, isotopic (Sr and Nd) and geochronologic data for inclusion in the databases described herein. The significance of 1.4 Ga granitoid rocks relative to the geologic evolution of the conterminous United States remains unclear, despite Anderson’s (1983) compilation and synthesis of compositional data pertinent to these rocks. The large-volume magmatic events indicated by these rocks, as well as their broad geographic distribution, tectonic significance, and association with mineral deposits, underscore their importance. The broad distribution of these rocks, from the northern mid-continent to the southwestern United States (in New Mexico, Arizona, California, and southernmost Nevada), throughout the Rocky Mountains in New Mexico and Colorado (and sporadically in southern Wyoming and central Idaho), and beneath much of the Plains region (as indicated by drilling), has led to the large-scale tectonic and magmatic processes responsible for genesis of the associated magmas being actively studied. In addition, Kisvarsanyi (1972) suggests that iron-copper deposits in the St. Francois Mountains of southeastern Missouri are petrogenetically associated with 1.4 Ga A-type granitoids that occur in that region. Similarly, Dall’Agnol and others (2012) summarize important global associations between A-type granitoid rocks and a variety of important ore deposit types, particularly tin, high-field-strength elements (Zr, Hf, Nb, Ta), rare-earth elements, and iron oxide-copper-gold deposits. Consequently, the need to better understand relations between A-type granitoid rocks, tectonic setting, and magma petrogenesis, as well as their genetic associations with important types of ore deposits, suggests that developing a definitive geochemical, modal, and geochronologic database for these rocks in the conterminous United States is of considerable value.

Data Series↗
USGS2015

Geology of Joshua Tree National Park geodatabase

The database in this Open-File Report describes the geology of Joshua Tree National Park and was completed in support of the National Cooperative Geologic Mapping Program of the U.S. Geological Survey (USGS) and in cooperation with the National Park Service (NPS). The geologic observations and interpretations represented in the database are relevant to both the ongoing scientific interests of the USGS in southern California and the management requirements of NPS, specifically of Joshua Tree National Park (JOTR). Joshua Tree National Park is situated within the eastern part of California’s Transverse Ranges province and straddles the transition between the Mojave and Sonoran deserts. The geologically diverse terrain that underlies JOTR reveals a rich and varied geologic evolution, one that spans nearly two billion years of Earth history. The Park’s landscape is the current expression of this evolution, its varied landforms reflecting the differing origins of underlying rock types and their differing responses to subsequent geologic events. Crystalline basement in the Park consists of Proterozoic plutonic and metamorphic rocks intruded by a composite Mesozoic batholith of Triassic through Late Cretaceous plutons arrayed in northwest-trending lithodemic belts. The basement was exhumed during the Cenozoic and underwent differential deep weathering beneath a low-relief erosion surface, with the deepest weathering profiles forming on quartz-rich, biotite-bearing granitoid rocks. Disruption of the basement terrain by faults of the San Andreas system began ca. 20 Ma and the JOTR sinistral domain, preceded by basalt eruptions, began perhaps as early as ca. 7 Ma, but no later than 5 Ma. Uplift of the mountain blocks during this interval led to erosional stripping of the thick zones of weathered quartz-rich granitoid rocks to form etchplains dotted by bouldery tors—the iconic landscape of the Park. The stripped debris filled basins along the fault zones. Mountain ranges and basins in the Park exhibit an east-west physiographic grain controlled by left-lateral fault zones that form a sinistral domain within the broad zone of dextral shear along the transform boundary between the North American and Pacific plates. Geologic and geophysical evidence reveal that movement on the sinistral faults zones has resulted in left steps along the zones, resulting in the development of sub-basins beneath Pinto Basin and Shavers and Chuckwalla Valleys. The sinistral fault zones connect the Mojave Desert dextral faults of the Eastern California Shear Zone to the north and east with the Coachella Valley strands of the southern San Andreas Fault Zone to the west. Quaternary surficial deposits accumulated in alluvial washes and playas and lakes along the valley floors; in alluvial fans, washes, and sheet wash aprons along piedmonts flanking the mountain ranges; and in eolian dunes and sand sheets that span the transition from valley floor to piedmont slope. Sequences of Quaternary pediments are planed into piedmonts flanking valley-floor and upland basins, each pediment in turn overlain by successively younger residual and alluvial surficial deposits.

California↗
USGS2007

Southern California Bight 2003 Regional Monitoring Program: V. water quality

More than $30 million is expended annually on environmental monitoring in the Southern California Bight (SCB), yet only 5% of the Bight is monitored on an ongoing basis. Therefore, environmental managers in the SCB decided to expand their monitoring program and, starting in 1994, decided to conduct periodic regional assessments of ecosystem condition and assess the overall health of the SCB. Sixty-five different organizations collaborated in 2003 to create the third SCB Regional Monitoring Program (Bight '03). Bight '03 was designed to be integrated regional monitoring program that encompasses regulatory, academic, and non-governmental agencies. Bight '03 had three components: Coastal Ecology, Shoreline Microbiology, and Water Quality. This report addresses the purpose, approach, findings, and recommendations from the Water Quality component, which focused on contamination-laden stormwater runoff, in particularly its variability in time and space as well as its short-term ecological impacts. Specifically, the Bight '03 Water Quality component had three primary goals, the first of which was to described the temporal evolution of stormwater plumes produced by the major southern California rivers. Specifically, the study was intended to determine how far offshore the plumes extended, how rapidly they advected, how long before the plumes dispersed and how these properties differed among storms and river systems. The second goal was to describe how the physical properties (e.g., turbidity, temperature, salinity) of the plume related to biogeochemical and ecological properties that are of more direct concern to the water quality management community. Accomplished primarily through ship-based sampling of water quality parameters, this second goal was to describe how far offshore, and for how ;long after the storm, elevated bacterial concentrations, toxicity, and nutrients could be detected. Similar to the fist goal, the study also addressed how these answers differed among storms and river systems. The final goal was to determine whether relationships between environmental indicators derived from coincident satellite remote sensing and in situ data sets are sufficiently robust for remote sensing to become a routine water quality monitoring programs. Remote sensing data potentially provide coastal managers with synoptic near-real time regional information about prevailing ocean conditions and hazards that would complement existing field-based sampling protocols, but only if there is a thorough understanding of how to interpret and utilize the proxy measures, such as ocean color. The understanding of these priorities through Bight '03 sampling is intended to provide the basis for developing more efficient, widespread and coast-effective coastal ocean monitoring techniques. Water quality data were collected across eight major river systems within four geographic regions of southern California. Field measurements included the primary contaminants of interest, i.e., bacterial concentrations, water toxicity, and nutrients, as well as related parameters such as temperatures, salinity, total suspended solids, transmissivity, chlorophyll, and colored dissolved organic material (CDOM) concentrations. For each of the four major regions, i.e., Santa Clara/Ventura Rivers, Ballona Creek/Santa Monica Bay, San Pedro Shelf, and the San Diego, Tijuana Rivers, two stormwater events were sampled for up to three days by ship resulting in 574 water column CTD+ profiles and 705 discrete water samples during 36 ship-days. These data were analyzed in combination with MODIS ocean color satellite remote sensing, buoy meteorological observations, drifters, and HF radar current measurements to evaluate the dispersal patterns, dynamics, and impacts of the freshwater runoff plumes. Based on these data and resulting analyses, the principal conclusions were as follow: - Stormwater runoff turbidity plumes were found to be spatially extensive, covering up to 2500 km 2 within the Southern California Bight nearshore zone, and persisting over the entire duration of the post-storm sampling period (at least 3 days). - The spatial and temporal extent of the portion of the plume with contaminants was far less than that of the turbidity plume, typically representing <10% of its area (30-70% off Tijuana); however, with contaminant impacts generally greatly reduced or absent by the third or fourth day of sampling - Pseudo-nitzschia , a harmful algae that produces domoic acid, was found to be more abundant than previously reported. - Accurately describing stormwater runoff plumes requires a combination of in situ and remote sensing assessment tools, with satellite data providing valuable synoptic information. From these conclusions, the following recommendations are provided: - Future studies designed to describe stormwater plumes should include a combination of ship - and remote sensing-based methods. - CDOM is a good proxy of the freshwater runoff plume and should be added as a standard measurement parameter on water quality instrument packages. - Investigations are needed that assess on a local basis the spatial extent of ecological effects of stormwater plumes early in the storm, ideally accompanied by airborne imagery to provide improved temporal & spatial resolution, to fill in knowledge gaps. The next Bight regional monitoring program should focus on quantifying nutrient loadings and dynamics in association with stormwater runoff and other sources, and characterize their attendant ecosystem impacts such as phytoplankton blooms.

California↗
USGS2023

Construction and modification of debris-flow alluvial fans as captured in the geomorphic and sedimentary record: Examples from the western Sangre de Cristo Mountains, south-central Colorado

Debris-flow alluvial fans are iconic features of dynamic landscapes and are hypothesized to record tectonic and climatic change. Here, we highlight their complex formation and evolution through an exemplary suite of Quaternary debris-flow alluvial fans emanating from the western range front of the Sangre de Cristo Mountains in south-central Colorado, USA. To evaluate the constructive and modifying processes that produce fan form and the associated sedimentary signatures, we applied a combined geomorphologic and sedimentologic approach using sedimentary facies analysis, soils mapping, high-resolution topographic data, and luminescence geochronology to document timing of fan construction and modification. We explored two subsets of fans in the study area: a southern set sourced from the extensively glaciated drainages of the Blanca Peak massif, and a northern set from the unglaciated drainages south of Great Sand Dunes National Park. Both sets of fans have: (1) active and successively abandoned surfaces that show evolving degradation of primary features through modification by secondary processes, (2) associated facies that display distinct characteristics representative of primary depositional and secondary modifying sedimentary processes, and (3) evidence of primary debris flow with subsequent modification by secondary processes. We found that surface geomorphology and facies assemblages in exposed alluvial-fan deposits represent sediment transport processes on both active and abandoned lobes. The link between fan surface morphologies and the sedimentary facies of their deposits provides a basis for an evolutionary process–based interpretation of debris-flow alluvial-fan geomorphology and provides a better understanding of complexities in buried paleosurfaces (intraformational progressive unconformities), surficial deformation, and landform development as recorded in debris-flow fan deposits in the sedimentary record.

Colorado↗
USGS2022

Identifying shared priorities for a bioregional approach to restoration in the Northern Gulf of Mexico

Natural resource management is often challenged with a mismatch between the scale of decision-making and the scale of the biological, ecological, and physical processes that control a system. Bioregional approaches to adaptive management have emerged as an approach to inform natural resource management at ecologically relevant scales and across multi-level governance structures. The implementation of adaptive management requires the determination of ecological and social priorities that can inform a desired system state across multiple governing bodies. We use the Northern Gulf of Mexico, United States, as a case study for a bioregional approach to adaptive management and illustrate a method for developing objectives and management priorities across programs and jurisdictions. Through this synthesis, using qualitative coding methods to develop a shared vocabulary across the diverse dataset, we identified commonalities and differences in ecological and human community priorities across the five states which line the Northern Gulf of Mexico. Using these shared priorities, we conceptualize a network of priority-focused objectives as a starting point for further stakeholder engagement and effectively monitoring and evaluating progress across boundaries. This approach serves as a framework for cross-program adaptive management by illustrating a desired system state that reflects the shared priorities among decision-making authorities in this region and offering individual programs or projects a method to articulate their contributions to the broader set of shared priorities Gulf-wide. This method can be used by restoration managers in any region of the world to align project objectives within cross-jurisdictional boundaries and illustrate the value of a bioregional approach to restoration.

Gulf of Mexico↗
USGS2003

Current controlled deposition on the Wilkes Land continental rise, Antarctica

Turbidite, contourite and hemipelagic deposition are the main components of Wilkes Land continental rise sedimentation above the regional unconformity WL2. On the continental shelf, unconformity WL2 marks the start of shelf progradation, which is interpreted to correspond with the onset of glacial conditions in this segment of the east Antarctic margin. Unusually large (i.e. up to 900 m relief and 18 km between levee crests) channel-levee deposits, and high relief (up to 490 m) mounded contourite-style deposits develop above unconformity WLlb. Unconformity WLlb overlies unconformity WL2 and is interpreted to have formed under a fully continental glacial regime where ice streams reached the palaeo-continental shelf edge. Based on an analysis of multichannel seismic profiles and sediment cores, we differentiate three phases in the development of the sedimentary unit between WLlb and the present seafloor. From older to younger these are: Phase 1, dominated by turbidite deposition; Phase 2, dominated by turbidite and contourite deposition with significant mound building; and Phase 3, dominated by turbidite and contourite deposition without active mound building. We hypothesize that building of the mounds during Phase 2 corresponded with times of expansion of the Antarctic ice-sheet when vast amounts of sediment were eroded from the continent and continental shelf. The large amount of unsorted glacial sediment supplied to the outer shelf apparently travelled down the slope canyons and rise channels as turbidity current flows to feed the usually large continental rise channel-levee complexes. The suspended fines of the turbidity flows were then entrained in a palaeo-nepheloid layer and carried by the westward flowing palaeo-contour currents until their deposition in the mounds. During Phase 3, sediment supply to the continental rise, although important in volume and capable of turbidite and contour-current deposition, was insufficient to support further building of the mounds. We believe the decrease in sediment supply to the continental rise from Phase 2 to Phase 3 could be the result of a change on sediment depocentres, with most of the sediment supplied to the margin during Phase 3 being trapped on the continental shelf. We believe that ultimately these changes are related to the stage of glacial evolution of the continent.

Geological Society, London, Memoirs↗
USGS2017

Zirconium and hafnium

Zirconium and hafnium are corrosion-resistant metals that are widely used in the chemical and nuclear industries. Most zirconium is consumed in the form of the main ore mineral zircon (ZrSiO 4 , or as zirconium oxide or other zirconium chemicals. Zirconium and hafnium are both refractory lithophile elements that have nearly identical charge, ionic radii, and ionic potentials. As a result, their geochemical behavior is generally similar. Both elements are classified as incompatible because they have physical and crystallochemical properties that exclude them from the crystal lattices of most rock-forming minerals. Zircon and another, less common, ore mineral, baddeleyite (ZrO 2 ), form primarily as accessory minerals in igneous rocks. The presence and abundance of these ore minerals in igneous rocks are largely controlled by the element concentrations in the magma source and by the processes of melt generation and evolution. The world’s largest primary deposits of zirconium and hafnium are associated with alkaline igneous rocks, and, in one locality on the Kola Peninsula of Murmanskaya Oblast, Russia, baddeleyite is recovered as a byproduct of apatite and magnetite mining. Otherwise, there are few primary igneous deposits of zirconium- and hafnium-bearing minerals with economic value at present. The main ore deposits worldwide are heavy-mineral sands produced by the weathering and erosion of preexisting rocks and the concentration of zircon and other economically important heavy minerals, such as ilmenite and rutile (for titanium), chromite (for chromium), and monazite (for rare-earth elements) in sedimentary systems, particularly in coastal environments. In coastal deposits, heavy-mineral enrichment occurs where sediment is repeatedly reworked by wind, waves, currents, and tidal processes. The resulting heavy-mineral-sand deposits, called placers or paleoplacers, preferentially form at relatively low latitudes on passive continental margins and supply 100 percent of the world’s zircon. Zircon makes up a relatively small percentage of the economic heavy minerals in most deposits and is produced primarily as a byproduct of heavy-mineral-sand mining for titanium minerals. From 2003 to 2012, world zirconium mineral concentrates production increased by more than 40 percent, and Australia and South Africa were the leading producers. Global consumption of zirconium mineral concentrates generally increased during the same time period, largely as a result of increased demand in developing economies in Asia and the Middle East. Global demand weakened in 2012, causing a decrease in world production of zirconium mineral concentrates and delaying the development of several new mining projects. Global consumption is expected to increase in the future, however, as demand from the ceramics, chemicals, and metals industries increases (driven by renewed growth in developing economies) and demand for zirconium and hafnium metal increases (driven by the construction and operation of new nuclear powerplants). The behaviors of zirconium and hafnium in the environment are very similar to one another in that most zirconium- and hafnium-bearing minerals have limited solubility and reactivity. Anthropogenic sources of zirconium, and likely hafnium, are from industrial zirconium-containing byproducts and emissions from the processing of sponge zirconium, and exposure to the general population from these sources is small. Zirconium and hafnium are likely not essential to human health and generally are considered to be of low toxicity to humans. The main exposure risks are associated with industrial inhalation and dermal exposure. Because of the low solubility of zirconium and hafnium, ecological health concerns in the aquatic environment and in soils are minimal. Heavy-mineral-sand mining may lead to increased erosion rates when the mining is managed improperly. In addition, surface mining requires removal of the overlying organic soil layer and produces waste material that includes tailings and slimes. The soil removal and mining activity disturbs the surrounding ecosystem and alters the character of the landscape. Dry mineral separation processes create high amounts of airborne dust, whereas wet mineral separation processes do not. In operations that restore the landscape to pre-mining conditions, the volume of waste and the impact on the landscape may be relatively temporary.

Professional Paper↗
USGS2018

Review of the geochemistry and metallogeny of approximately 1.4 Ga granitoid intrusions of the conterminous United States

The conterminous United States hosts numerous volumetrically significant and geographically dispersed granitoid intrusions that range in age from 1.50 to 1.32 billion years before present (Ga). Although previously referred to as A-type granites, most are better described as ferroan granites. These granitoid intrusions are distributed in the northern and central Rocky Mountains, the Southwest, the northern midcontinent, and a swath largely buried beneath Phanerozoic cover across the Great Plains and into the southern midcontinent. These intrusions, with ages that are bimodally distributed between about 1.455–1.405 Ga and 1.405–1.320 Ga, are dispersed nonsystematically with respect to age across their spatial extents. Globally, although A-type or ferroan granites are genetically associated with rare-metal deposits, most U.S. 1.4 Ga granitoid intrusions do not contain significant deposits. Exceptions are the light rare-earth element deposit at Mountain Pass, California, and the iron oxide-apatite and iron oxide-copper-gold deposits in southeast Missouri. Most of the U.S. 1.4 Ga granitoid intrusions are composed of hornblende ± biotite or biotite ± muscovite monzogranite, commonly with prominent alkali feldspar megacrysts; however, modal compositions vary widely. These intrusions include six of the eight commonly identified subtypes of ferroan granite: alkali-calcic and calc-alkalic peraluminous subtypes; alkalic, alkali-calcic, and calc-alkalic metaluminous subtypes; and the alkalic peralkaline subtype. The U.S. 1.4 Ga granitoid intrusions also include variants of these subtypes that have weakly magnesian compositions. Extreme large-ion lithophile element enrichments typical of ferroan granites elsewhere are absent among these intrusions. Chondrite-normalized rare-earth element patterns for these intrusions have modest negative slopes and moderately developed negative europium anomalies. Their radiogenic isotopic compositions are consistent with mixing involving primitive, mantle-derived components and evolved, crust-derived components. Each compositional subtype can be ascribed to a relatively unique petrogenetic history. The numerically dominant ferroan, peraluminous granites probably represent low-degree, relatively high-pressure partial melting of preexisting, crust-derived, intermediate-composition granitoids. The moderately numerous, weakly magnesian, peraluminous granites probably reflect similar partial melting but at a higher degree and in a lower pressure environment. In contrast, the ferroan but metaluminous granites may be the result of extensive differentiation of tholeiitic basalt. Finally, the peralkaline igneous rocks at Mountain Pass have compositions potentially derived by differentiation of alkali basalt. The varying alkalic character of each subtype probably reflects polybaric petrogenesis and the corresponding effect of diverse mineral stabilities on ultimate melt compositions. Mantle-derived mafic magma and variably assimilated partial melts of mainly juvenile Paleoproterozoic crustal components are required to generate the relatively low initial strontium (87Sr/86Sr) and distinctive neodymium isotope compositions characteristic of the U.S. 1.4 Ga granitoid intrusions. The characteristics of these intrusions are consistent with crustal melting in an extensional/decompressional, intracratonic setting that was triggered by mantle upwelling and emplacement of tholeiitic basaltic magma at or near the base of the crust. Composite magmas, formed by mingling and mixing mantle components with partial melts of Paleoproterozoic crust, produced variably homogenized storage reservoirs that continued polybaric evolution as intrusions lodged at various crustal depths.

Scientific Investigations Report↗
USGS2023

The Everglades vulnerability analysis: Linking ecological models to support ecosystem restoration

Understanding of the Everglades’ ecological vulnerabilities and restoration needs has advanced over the past decade but has not been applied in an integrated manner. To address this need, we developed the Everglades Vulnerability Analysis (EVA), a decision support tool that uses modular Bayesian networks to predict the ecological outcomes of a subset of the ecosystem’s health indicators. This tool takes advantage of the extensive modeling work already done in the Everglades and synthesizes information across indicators of ecosystem health to forecast long-term, landscape-scale changes. In addition, the tool can predict indicator vulnerability through comparison to user-defined ideal system states that can vary in the level of certainty of outcomes. An integrated understanding of the Everglades system is essential for evaluation of trade-offs at local, regional, and system-wide scales. Through EVA, Everglades restoration decision makers can provide effective guidance during restoration planning and implementation processes to mitigate unintended consequences that could result in further damage to the Everglades system.

Florida↗
USGS2019

Case studies in groundwater contaminant fate and transport

A case study of groundwater contamination is a detailed study of a single site contaminated with a chemical or mixture that is known to be a problem at many sites. The goal of case studies is to provide insights into the physical, chemical, and biological processes controlling migration, natural attenuation, or remediation of common groundwater contaminants. Ideally, processes occurring at a case study site are representative of other sites so that knowledge gained from these intensive studies can be applied at thousands of sites where fewer data are available. Several characteristics of case studies contribute to their value. First, they may have tens to hundreds of monitoring wells, compared to fewer than ten wells at some contaminated sites. Second, some case studies continue for many years or even decades, providing insights into temporal progression of slow processes. Third, analytical methods prohibitively expensive for routine use or under development may be tested at case study sites. Finally, the ongoing characterization typical of case study sites builds a foundation of knowledge that facilitates sophisticated experimental design and testing of new methods. This article is divided into sections based on the contaminant type because the chemical and biological processes required for remediation vary for each contaminant. Most importantly, some contaminants can be biodegraded whereas metals and radionuclides cannot be destroyed but can be immobilized or rendered less toxic. The emphasis is on case studies of natural processes that control the fate and transport of contaminants in groundwater rather than on active remediation methods. The principles learned from these studies may form the basis for design of remedial strategies. The organic contaminants are divided into: petroleum hydrocarbons, fuel oxygenates, coal tar and wastes from manufactured gas plants, and chlorinated solvents. The inorganic contaminants covered are metals and radionuclides, arsenic, and nitrate. Case studies of mixed waste plumes from landfills are also described. Experimental sites where contaminants have been introduced into an aquifer as an emplaced source or a controlled release may not meet the above definition of case studies, but some are included because the overall goal is to impart lessons learned from detailed field studies. It is impossible to cover all case studies in this short format. Conversely, focusing on one or two does not convey the breadth of research results in entire range of case studies. Instead, the strategy is to describe the evolution of knowledge for each contaminant class while providing citations of relevant case studies. Much of the progress in understanding of the fate of contaminants in groundwater is based on laboratory studies; thus whenever possible, papers that included both field and laboratory results have been included among the citations. Two topics of growing importance have not been covered. These are the fate of pharmaceuticals in groundwater and discharge of contaminant plumes to surface water. These topics merit coverage in the future as knowledge grows and case studies increase in number.

Environmental Science↗
USGS2019

Impact of prey occupancy and other ecological and anthropogenic factors on Tiger distribution in Thailand’s Western Forest Complex

Despite conservation efforts, large mammals such as tigers (Panthera tigris) and their main prey, gaur (Bos gaurus), banteng (Bos javanicus), and sambar (Rusa unicolor), are highly threatened and declining across their entire range. The only large viable source population of tigers in mainland Southeast Asia occurs in Thailand's Western Forest Complex (WEFCOM), an approximately 19,000 km 2 landscape of 17 contiguous protected areas. We used an occupancy modeling framework, which accounts for imperfect detection, to identify the factors that affect tiger distribution at the approximate scale of a female tiger's home range, 64 km 2 , and site use at a scale of 1-km 2 . At the larger scale, we estimated the proportion of sites at WEFCOM that were occupied by tigers; at the finer scale, we identified the key variables that influence site-use and developed a predictive distribution map. At both scales, we examined key anthropogenic and ecological factors that help explain tiger distribution and habitat use, including probabilities of gaur, banteng, and sambar occurrence from a companion study. Occupancy estimated at the 64-km 2 scale was primarily influenced by the combined presence of all three large prey species, and 37% or 5,858 km 2 of the landscape was predicted to be occupied by tigers. In contrast, site use estimated at the scale of 1 km 2 was most strongly influenced by the presence of sambar. By modeling occupancy while accounting for imperfect probability of detection, we established reliable benchmark data on the distribution of tigers in WEFCOM. This study also identified factors that limit tiger distributions; which managers can then target to expand tiger distribution and guide recovery elsewhere in Southeast Asia.

Ecology and Evolution↗
USGS2006

The Late-Holocene evolution of the Miseno area (south-western Campi Flegrei) as inferred by stratigraphy, petrochemistry and 40 Ar/ 39 Ar geochronology:Chapter 6 in Volcanism in the Campania Plain — Vesuvius, Campi Flegrei and Ignimbrites

This study on terrestrial and marine successions increases the understanding of the Late-Holocene volcanological and stratigraphical evolution of the south-western part of Campi Flegrei caldera. Stratigraphic data derived from field studies of two major tuff vents located along the coastal zone, namely Porto Miseno and Capo Miseno, clearly indicate that the Porto Miseno tuff ring slightly predates the Capo Miseno tuff cone. 40 Ar/ 39 Ar step-heating experiments, carried out on fresh sanidine separates from pumice samples, yielded a plateau age of 5090±140 yr BP for Capo Miseno and 6490±510 yr BP for Porto Miseno vent, thus confirming field observations. The volcanoclastic input derived from this recent and intense eruptive activity played a major role in the inner-shelf stratigraphic evolution of the Porto Miseno Bay deposits that have been drilled up to 40 m depth off the crater rim. The cored succession is characterised by transgressive marine deposits (mostly volcanic sand) with two intercalated peat layers (t 1 and t 2 ), dated at 3560±40 yr BP and 7815±55 yr BP ( 14 C), respectively, interbedded with a 1–5 m thick pumice layer (tephra C). Peat layers have been chronostratigraphically correlated with two widespread paleosols onland while petrochemical analyses allowed us to correlate tephra C with the Capo Miseno tuff cone deposits. The results presented in this study imply a Late-Holocene volcanic activity that is also well preserved in the marine record in this sector of the caldera where a new chronostratigraphic reconstruction of the eruptive events is required in order to better evaluate the hazard assessment of the area.

Campi Flegrei caidera↗
USGS2019

Mismatches between breeding phenology and resource abundance of resident alpine ptarmigan negatively affect chick survival

1. Phenological mismatches – defined here as the difference in reproductive timing of an individual relative to the availability of its food resources – occur in many avian species. Mistiming breeding activities in environments with constrained breeding windows may have severe fitness costs due to reduced opportunities for repeated breeding attempts. Therefore, species occurring in alpine environments may be particularly vulnerable. 2. We studied fitness consequences of timing of breeding in an alpine-endemic species, the white-tailed ptarmigan ( Lagopus leucura ), to investigate its influence on chick survival. We estimated phenological mismatch by measuring plant and arthropods used by ptarmigan in relation to their timing of breeding. 3. We monitored 120 nests and 67 broods over a three-year period (2013–2015) at three alpine study sites in the Rocky Mountains of Colorado. During this same period we actively monitored food resource abundance in brood-use areas to develop year and site specific resource phenology curves. We developed several mismatch indices from these curves that were then fit as covariates in mark-recapture chick survival models. 4. A correlation analysis between seasonal changes in arthropod and food plant abundance indicated that a normalized difference vegetation index (NDVI) was likely the best predictor for food available to hens and chicks. A survival model that included an interaction between NDVI mismatch and chick age received strong support and indicated young chicks were more susceptible to mismatch than older chicks. 5. We provide evidence that individual females of a resident alpine species can be negatively affected by phenological mismatch. Our study focused on individual females and did not examine if phenological mismatch was present at the population level. Future work in animal populations occurring in mountain systems focusing on a combination of both individual- and population- level metrics of mismatch will be beneficial.

Ecology and Evolution↗
USGS2025

Estimating polar bear (Ursus maritimus) age based on an epigenetic DNA methylation clock

Knowledge of animal age is essential to wildlife managers for obtaining meaningful and accurate insights into demographic parameters. A common approach to aging wildlife, including bears ( Ursus spp.), has been extracting a tooth during physical capture and counting the cementum annuli. Limitations to tooth-based aging include questionable accuracy and differing results based on the observer and laboratory. DNA methylation-based epigenetic aging clocks have been developed for many species but not yet for polar bears ( Ursus maritimus ). We generated DNA methylation data from whole blood samples ( n = 109) obtained during live capture operations from polar bears of known age in the Chukchi Sea and southern Beaufort Sea subpopulations. We used these samples to calibrate a species-specific epigenetic clock to estimate polar bear chronological age from DNA methylation (DNAm) age. The final polar bear clock was highly accurate ( r = 0.97) with a median absolute error of approximately 9 months. We applied the polar bear clock to 74 blood samples from live-captured polar bears with a cementum annuli-estimated age. Predicted age estimates for these bears ranged from 1.43 to 18.63 years compared to the estimated tooth age range of 3.23–25.27. These epigenetic clocks can be used for polar bear research and management where accurate estimates of age are needed for estimating demographic parameters.

Ecology and Evolution↗