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At least 919 records · Page 51Linked to original sources

USGS2017

What to eat in a warming world: do increased temperatures necessitate hazardous duty pay?

Contemporary climate change affects nearly all biomes, causing shifts in animal distributions and resource availability. Changes in resource selection may allow individuals to offset climatic stress, thereby providing a mechanism for persistence amidst warming conditions. Whereas the role of predation risk in food choice has been studied broadly, the extent to which individuals respond to thermoregulatory risk by changing resource preferences is unclear. We addressed whether individuals compensated for temperature-related reductions in foraging time by altering forage preferences, using the American pika ( Ochotona princeps ) as a model species. We tested two hypotheses: (1) food-quality hypothesis—individuals exposed to temperature extremes should select higher-quality vegetation in return for accepting a physiologically riskier feeding situation; and (2) food-availability hypothesis—individuals exposed to temperature extremes should prioritize foraging quickly, thereby decreasing selection for higher-quality food. We quantified the composition and quality (% moisture, % nitrogen, and fiber content) of available and harvested vegetation, and deployed a network of temperature sensors to measure in situ conditions for 30 individuals, during July–Sept., 2015. Individuals exposed to more extreme daytime temperatures showed increased selection for high-nitrogen and for low-fiber vegetation, demonstrating strong support for the food-quality hypothesis. By contrast, pikas that experienced warmer conditions did not reduce selection for any of the three vegetation-quality metrics, as predicted by the food-availability hypothesis. By shifting resource-selection patterns, temperature-limited animals may be able to proximately buffer some of the negative effects associated with rapidly warming environments, provided that sufficient resources remain on the landscape.

Oecologia↗

USGS2026

Carryover effects across juvenile periods vary by species, cause-specific mortality, and stage-specific behavior

Conditions during one life-stage can carry over to influence fitness outcomes in later stages. How carryover effects manifest, however, may vary depending on the type and magnitude of risks that animals face in subsequent life-stages. The influence of carryover effects on cause-specific mortality remains largely unclear, particularly during vulnerable life-stages, including juvenile periods. We proposed and investigated the Cause-specific carryover hypothesis, that the relative influence of traits developed during a previous stage on mortality during the next vary by cause of mortality, using juvenile sagebrush songbirds (Brewer’s sparrow, Spizella breweri ; sagebrush sparrow, Artemisiospiza nevadensis ; sage thrasher, Oreoscoptes montanus ) as a focal system. We tracked birds during the post-fledging period (a juvenile period following the nestling period), identified the rates and causes of mortality, and tested the relative influence of different nestling traits (wing length, tarsus length, feather development, and body condition) on post-fledging mortality risk. Carryover effects varied across co-occurring species and differed by cause of mortality, and tarsus length had an unexpected and outsized impact on predation risk in the two sparrows. Although wing morphology typically is considered the most important trait for mobility in birds, most mortalities occurred during the first 5 days of the post-fledging period when altricial fledglings were incapable of flight and likely relied on running or scrambling ability to escape predators. Therefore, carryover effects were driven by stage-specific behavior during the period of highest risk. Developing animals may face investment trade-offs between morphological traits that influence different types of risk during different subsequent stages.

Wyoming↗

USGS2002

A Geochemical Trophic Cascade in Yellowstone's Geothermal Environments

We contrast the geochemistry of the Madison drainage, which has high concentrations of geothermal features, with the Lamar drainage of Yellowstone National Park, USA, and trace the consequences of geochemical differences through abiotic and biotic linkages in the ecosystem. Waters in the geothermal-dominated drainage contained anomalously high levels of fluoride (F) and silica (SiO 2 ). Soils, stream sediments, and surface waters that interact or mix with geothermal waters, in turn, had elevated F and SiO 2 concentrations compared to similar samples from the Lamar drainage. The geochemical differences were reflected in the chemistry of forage plants, with some plants from geothermally influenced areas containing four- to eightfold higher concentrations of F and SiO 2 than similar plants in the Lamar drainage. Geothermal heat reduced snowpack, and we found that elk (Cervus elaphus) concentrated in these refugia as snowpack increased each winter. The consequent high dietary intake of F in animals associated with the geothermal areas was confirmed by the finding that bone samples from elk living in the Madison drainage contained sixfold higher concentrations of F than samples collected from animals wintering in the Lamar drainage. High F exposure resulted in compromised dentition due to fluoride toxicosis, which was undoubtedly exacerbated by the abrasive action of silica. The consequent accelerated and aberrant tooth wear resulted in early onset of senescence, reduced life span, and an abbreviated age structure. We speculate that these altered demographics, combined with spatial heterogeneity of snowpack, will result in increased vulnerability of this large herbivore population to wolf predation and less resiliency to compensate demographically for predation.

Wyoming↗

USGS2017

Spatially explicit dynamic N-mixture models

Knowledge of demographic parameters such as survival, reproduction, emigration, and immigration is essential to understand metapopulation dynamics. Traditionally the estimation of these demographic parameters requires intensive data from marked animals. The development of dynamic N-mixture models makes it possible to estimate demographic parameters from count data of unmarked animals, but the original dynamic N-mixture model does not distinguish emigration and immigration from survival and reproduction, limiting its ability to explain important metapopulation processes such as movement among local populations. In this study we developed a spatially explicit dynamic N-mixture model that estimates survival, reproduction, emigration, local population size, and detection probability from count data under the assumption that movement only occurs among adjacent habitat patches. Simulation studies showed that the inference of our model depends on detection probability, local population size, and the implementation of robust sampling design. Our model provides reliable estimates of survival, reproduction, and emigration when detection probability is high, regardless of local population size or the type of sampling design. When detection probability is low, however, our model only provides reliable estimates of survival, reproduction, and emigration when local population size is moderate to high and robust sampling design is used. A sensitivity analysis showed that our model is robust against the violation of the assumption that movement only occurs among adjacent habitat patches, suggesting wide applications of this model. Our model can be used to improve our understanding of metapopulation dynamics based on count data that are relatively easy to collect in many systems.

Population Ecology↗

USGS2014

To understand coral disease, look at coral cells

Diseases threaten corals globally, but 40 years on their causes remain mostly unknown. We hypothesize that inconsistent application of a complete diagnostic approach to coral disease has contributed to this slow progress. We quantified methods used to investigate coral disease in 492 papers published between 1965 and 2013. Field surveys were used in 65% of the papers, followed by biodetection (43%), laboratory trials (20%), microscopic pathology (21%), and field trials (9%). Of the microscopic pathology efforts, 57% involved standard histopathology at the light microscopic level (12% of the total investigations), with the remainder dedicated to electron or fluorescence microscopy. Most (74%) biodetection efforts focused on culture or molecular characterization of bacteria or fungi from corals. Molecular and immunological tools have been used to incriminate infectious agents (mainly bacteria) as the cause of coral diseases without relating the agent to specific changes in cell and tissue pathology. Of 19 papers that declared an infectious agent as a cause of disease in corals, only one (5%) used microscopic pathology, and none fulfilled all of the criteria required to satisfy Koch’s postulates as applied to animal diseases currently. Vertebrate diseases of skin and mucosal surfaces present challenges similar to corals when trying to identify a pathogen from a vast array of environmental microbes, and diagnostic approaches regularly used in these cases might provide a model for investigating coral diseases. We hope this review will encourage specialists of disease in domestic animals, wildlife, fish, shellfish, and humans to contribute to the emerging field of coral disease.

EcoHealth↗

USGS2015

Age at vaccination may influence response to sylvatic plague vaccine (SPV) in Gunnison’s prairie dogs ( Cynomys gunnisoni )

Gunnison’s prairie dogs ( Cynomys gunnisoni ) have been considered at greater risk from Yersinia pestis (plague) infection in the montane portion of their range compared to populations at lower elevations, possibly due to factors related to flea transmission of the bacteria or greater host susceptibility. To test the latter hypothesis and determine whether vaccination against plague with an oral sylvatic plague vaccine (SPV) improved survival, we captured prairie dogs from a C. g. gunnisoni or “montane” population and a C. g. zuniensis or “prairie” population for vaccine efficacy and challenge studies. No differences ( P = 0.63) were found in plague susceptibility in non-vaccinated animals between these two populations; however, vaccinates from the prairie population survived plague challenge at significantly higher rates ( P < 0.01) than those from the montane population. Upon further analysis, we determined that response to immunization was most likely associated with differences in age, as the prairie group was much younger on average than the montane group. Vaccinates that were juveniles or young adults survived plague challenge at a much higher rate than adults ( P < 0.01 and P = 0.02, respectively), but no difference ( P = 0.83) was detected in survival rates between control animals of different ages. These results suggest that host susceptibility is probably not related to the assumed greater risk from plague in the C. g. gunnisoni or “montane” populations of Gunnison’s prairie dogs, and that SPV could be a useful plague management tool for this species, particularly if targeted at younger cohorts.

Colorado↗

USGS2017

Factors influencing uptake of sylvatic plague vaccine baits by prairie dogs

Sylvatic plague vaccine (SPV) is a virally vectored bait-delivered vaccine expressing Yersinia pestis antigens that can protect prairie dogs (Cynomys spp.) from plague and has potential utility as a management tool. In a large-scale 3-year field trial, SPV-laden baits containing the biomarker rhodamine B (used to determine bait consumption) were distributed annually at a rate of approximately 100–125 baits/hectare along transects at 58 plots encompassing the geographic ranges of four species of prairie dogs. We assessed site- and individual-level factors related to bait uptake in prairie dogs to determine which were associated with bait uptake rates. Overall bait uptake for 7820 prairie dogs sampled was 70% (95% C.I. 69.9–72.0). Factors influencing bait uptake rates by prairie dogs varied by species, however, in general, heavier animals had greater bait uptake rates. Vegetation quality and day of baiting influenced this relationship for black-tailed, Gunnison’s, and Utah prairie dogs. For these species, baiting later in the season, when normalized difference vegetation indices (a measure of green vegetation density) are lower, improves bait uptake by smaller animals. Consideration of these factors can aid in the development of species-specific SPV baiting strategies that maximize bait uptake and subsequent immunization of prairie dogs against plague.

EcoHealth↗

USGS2018

Impact of sylvatic plague vaccine on non-target small rodents in grassland ecosystems

Oral vaccination is an emerging management strategy to reduce the prevalence of high impact infectious diseases within wild animal populations. Plague is a flea-borne zoonosis of rodents that often decimates prairie dog ( Cynomys spp.) colonies in the western USA. Recently, an oral sylvatic plague vaccine (SPV) was developed to protect prairie dogs from plague and aid recovery of the endangered black-footed ferret ( Mustela nigripes ). Although oral vaccination programs are targeted toward specific species, field distribution of vaccine-laden baits can result in vaccine uptake by non-target animals and unintended indirect effects. We assessed the impact of SPV on non-target rodents at paired vaccine and placebo-treated prairie dog colonies in four US states from 2013 to 2015. Bait consumption by non-target rodents was high (70.8%, n = 3113), but anti-plague antibody development on vaccine plots was low (23.7%, n = 266). In addition, no significant differences were noted in combined deer mice ( Peromyscus maniculatus ) and western harvest mouse ( Reithrodontomys megalotis ) abundance or community evenness and richness of non-target rodents between vaccine-treated and placebo plots. In our 3-year field study, we could not detect a significant positive or negative effect of SPV application on non-target rodents.

EcoHealth↗

USGS2009

Structural changes in vegetation coincident with annual grass invasion negatively impacts sprint velocity of small vertebrates

Sagebrush ecosystems in the intermountain west of the United States are being threatened by conversion to the non-native grass, cheatgrass ( Bromus tectorum ). The dramatic shift in the physical structure of vegetation coincident with cheatgrass invasion likely has negative impacts on animal communities, yet these structural impacts have not been well-studied. In a previous study, dense cheatgrass stems reduced sprint velocity for the flattened, wide-bodied desert horned lizard ( Phrynosoma platyrhinos ). Here, we asked if a decrease in sprint velocity due to cheatgrass impediment can be generalized to the suite of small vertebrates inhabiting the sagebrush ecosystems of western Utah. We evaluated sprint performance of the common rodent ( n = 3) and lizard ( n = 4) species on two raceway types, cheatgrass and no-cheatgrass, and hypothesized that body size, body shape, and form of movement are important factors influencing sprint velocity through dense cheatgrass stems. All species showed significant reductions in speed on cheatgrass versus no-cheatgrass raceways, with percent reduction greatest for larger, wider, or hopping organisms compared to smaller, more slender, or running organisms. Of concern, surveys for rodents and lizards at our study areas support a common pattern: lower abundances of small vertebrates, as well as a loss of rodent species richness, in areas infested with cheatgrass compared to intact, native sagebrush communities. By extension, we expect a negative impact on animal communities in other semi-arid regions experiencing dramatic shifts in vegetation structure upon invasion by non-native grasses that are capable of forming dense stands in the interspaces of native desert plants [e.g., Sonoran desert invaded by buffelgrass ( Pennisetum ciliare )].

Utah↗

USGS2011

Customizing a rangefinder for community-based wildlife conservation initiatives

Population size of many threatened and endangered species is relatively unknown because estimating animal abundance in remote parts of the world, without access to aircraft for surveying vast areas, is a scientific challenge with few proposed solutions. One option is to enlist local community members and train them in data collection for large line transect or point count surveys, but financial and sometimes technological constraints prevent access to the necessary equipment and training for accurately quantifying distance measurements. Such measurements are paramount for generating reliable estimates of animal density. This problem was overcome in a survey of Asiatic wild ass ( Equus hemionus ) in the Great Gobi B Strictly Protected Area, Mongolia, by converting an inexpensive optical sporting rangefinder into a species-specific rangefinder with visual-based categorical labels. Accuracy trials concluded 96.86% of 350 distance measures matched those from a laser rangefinder. This simple customized optic subsequently allowed for a large group of minimally-trained observers to simultaneously record quantitative measures of distance, despite language, education, and skill differences among the diverse group. The large community-based effort actively engaged local residents in species conservation by including them as the foundation for collecting scientific data.

Great Gobi B Strictly Protected Area↗

USGS2011

Reproductive endocrine disruption in smallmouth bass ( Micropterus dolomieu ) in the Potomac River basin: spatial and temporal comparisons of biological effects

A high prevalence of intersex or testicular oocytes (TO) in male smallmouth bass within the Potomac River drainage has raised concerns as to the health of the river. Studies were conducted to document biomarker responses both temporally and spatially to better understand the influence of normal physiological cycles, as well as water quality and land-use influences. Smallmouth bass were collected over a 2-year period from three tributaries of the Potomac River: the Shenandoah River, the South Branch Potomac and Conococheague Creek, and an out-of-basin reference site on the Gauley River. The prevalence of TO varied seasonally with the lowest prevalence observed in July, post-spawn. Reproductive maturity and/or lack of spawning the previous spring, as well as land-use practices such as application of manure and pesticides, may influence the seasonal observations. Annual, seasonal, and site differences were also observed in the percentage of males with measurable concentrations of plasma vitellogenin, mean concentration of plasma vitellogenin in females, and plasma concentrations of 17β-estradiol and testosterone in both sexes. Bass collected in the South Branch Potomac (moderate to high prevalence of TO) had less sperm per testes mass with a lower percentage of those sperm being motile when compared to those from the Gauley River (low prevalence of TO). An inverse relationship was noted between TO severity and sperm motility. An association between TO severity and wastewater treatment plant flow, percent of agriculture, total number of animal feeding operations, the number of poultry houses, and animal density within the catchment was observed.

Maryl↗

USGS2009

Relationship between body condition of American alligators and water depth in the Everglades, Florida

Feeding opportunities of American alligators (Alligator mississippiensis) in freshwater wetlands in south Florida are closely linked to hydrologic conditions. In the Everglades, seasonally and annually fluctuating surface water levels affect populations of aquatic organisms that alligators consume. Since prey becomes more concentrated when water depth decreases, we hypothesized an inverse relationship between body condition and water depth in the Everglades. On average, condition of adult alligators in the dry season was significantly higher than in the wet season, but this was not the case for juveniles/subadults. The correlation between body condition and measured water depth at capture locations was weak; however, there was a significant negative correlation between the condition and predicted water depth prior to capture for all animals except for spring juveniles/subadults which had a weak positive condition-water depth relationship. Overall, a relatively strong inverse correlation occurred at 10-49 days prior to the capture day, suggesting that current body condition of alligators may depend on feeding opportunities during that period. Fitted regression of body condition on water depth (mean depth of 10 days when condition-water depth correlation was greatest) resulted in a significantly negative slope, except for spring adult females and spring juveniles/subadults for which slopes were not significantly different from zero. Our results imply that water management practices may be critical for alligators in the Everglades since water depth can affect animal condition in a relatively short period of time.

Hydrobiologia↗

USGS2014

Reduced population variance in strontium isotope values informs domesticated turkey use at Chaco Canyon, New Mexico, USA

Traditionally strontium isotopes (87Sr/86Sr) have been used as a sourcing tool in numerous archaeological artifact classes. The research presented here demonstrates that 87Sr/86Srbioapatite ratios also can be used at a population level to investigate the presence of domesticated animals and methods of management. The proposed methodology combines ecology, isotope geochemistry, and behavioral ecology to assess the presence and nature of turkey (Meleagris gallopavo) domestication. This case study utilizes 87Sr/86Srbioapatite ratios from teeth and bones of archaeological turkey, deer (Odocoileus sp.), lagomorph (Lepus sp. and Sylvilagus sp.), and prairie-dog (Cynomys sp.) from Chaco Canyon, New Mexico, U.S.A. (ca. A.D. 800 – 1250). Wild deer and turkey from the southwestern U.S.A. have much larger home ranges and dispersal behaviors (measured in kilometers) when compared to lagomorphs and prairie dogs (measured in meters). Hunted deer and wild turkey from archaeological contexts at Chaco Canyon are expected to have a higher variance in their 87Sr/86Srbioapatite ratios, when compared to small range taxa (lagomorphs and prairie dogs). Contrary to this expectation, 87Sr/86Srbioapatite values of turkey bones from Chacoan assemblages have a much lower variance than deer and are similar to that of smaller mammals. The sampled turkey values show variability most similar to lagomorphs and prairie dogs, suggesting the turkeys from Chaco Canyon were consuming a uniform diet and/or were constrained within a limited home range, indicating at least proto-domestication. The population approach has wide applicability for evaluating the presence and nature of domestication when combined with paleoecology and behavioral ecology in a variety of animals and environments.

New Mexico↗

USGS2019

Connectivity of mule deer (Odocoileus hemionus) populations in southern California: A genetic survey of a mobile ungulate in a highly fragmented urban landscape

Urbanization is a substantial force shaping the genetic and demographic structure of natural populations. Urban development and major highways can limit animal movements, and thus gene flow, even in highly mobile species. Characterizing varying species responses to human activity and fragmentation is important for maintaining genetic continuity in wild animals and for preserving biodiversity. As one of the only common and wide-ranging large wild herbivores in much of urban North America, deer play an important ecological role in urban ecosystems, yet the genetic impacts of development on deer are not well known.

Landscape Ecology↗

USGS2012

The discourses of incidents: Cougars on Mt. Elden and in Sabino Canyon, Arizona

Incidents are relatively short periods of intensified discourse that arise from public responses to symbolically important actions by public officials, and an important part of the conflict that increasingly surrounds state wildlife management in the West. In an effort to better understand incidents as a facet of this conflict, we analyzed the discourses of two incidents in Arizona that were precipitated by the intended removal of cougars by managers in response to public safety concerns. We used newspaper content, 1999–2007, to elucidate seminal patterns of public discourses and discourse coalitions as well as differences in discursive focus between incident periods and background periods. Cougars were mentioned in newspaper articles 13–33 times more often during incidents compared with background periods. State wildlife agency commissioners and hunters were part of a discourse coalition that advocated killing cougars to solve problems, blamed cougars and those who promoted the animals’ intrinsic value and sought to retain power to define and solve cougar-related problems. Personnel from affected state and federal agencies expressed a similar discourse. Environmentalists, animal protection activists, and some elected officials were of a coalition that defined “the problem” primarily in terms of people’s behaviors, including behaviors associated with current institutional arrangements. This discourse advocated decentralizing power over cougar management. The discourses reflected different preferences for the allocations of power and use of lethal versus non-lethal methods, which aligned with apparent core beliefs and participants’ enfranchisement or disenfranchisement by current state-level management power arrangements.

Arizona↗

USGS2017

Changes in habitat availability for multiple life stages of diamondback terrapins (Malaclemys terrapin) in Chesapeake Bay in response to sea level rise

Global sea level rise (SLR) will significantly alter coastal landscapes through inundation and erosion of lowlying areas. Animals that display area fidelity and rely on fringing coastal habitats during multiple life stages, such as diamondback terrapins (Malaclemys terrapin Schoepff 1793), are likely to be particularly vulnerable to SLR-induced changes. We used a combination of empirical nest survey data and results from a regional SLR model to explore the long-term availability of known nesting locations and the modeled availability of fringing coastal habitats under multiple SLR scenarios for diamondback terrapin in the MD portion of Chesapeake Bay and the MD coastal bays. All SLR scenarios projected the rapid inundation of historically used nesting locations of diamondback terrapins with 25%–55% loss within the next 10 years and over 80% loss by the end of the century. Model trajectories of habitat losses or gains depended on habitat type and location. A key foraging habitat, brackish marsh, was projected to decline 6%–94%, with projections varying spatially and among scenarios. Despite predicted losses of extant beach habitats, future gains in beach habitat due to erosion and overwash were projected to reach 40%–600%. These results demonstrate the potential vulnerability of diamondback terrapins to SLR in Chesapeake Bay and underscore the possibility of compounding negative effects of SLR on animals whose habitat requirements differ among life stages. More broadly, this study highlights the vulnerability of species dependent on fringing coastal habitats and emphasizes the need for a long-term perspective for coastal development in the face of SLR.

Chesapeake Bay↗

USGS2014

Hidden Markov model for dependent mark loss and survival estimation

Mark-recapture estimators assume no loss of marks to provide unbiased estimates of population parameters. We describe a hidden Markov model (HMM) framework that integrates a mark loss model with a Cormack–Jolly–Seber model for survival estimation. Mark loss can be estimated with single-marked animals as long as a sub-sample of animals has a permanent mark. Double-marking provides an estimate of mark loss assuming independence but dependence can be modeled with a permanently marked sub-sample. We use a log-linear approach to include covariates for mark loss and dependence which is more flexible than existing published methods for integrated models. The HMM approach is demonstrated with a dataset of black bears ( Ursus americanus ) with two ear tags and a subset of which were permanently marked with tattoos. The data were analyzed with and without the tattoo. Dropping the tattoos resulted in estimates of survival that were reduced by 0.005–0.035 due to tag loss dependence that could not be modeled. We also analyzed the data with and without the tattoo using a single tag. By not using.

Journal of Agricultural, Biological, and Environme↗

USGS1993

Snaring to control feral pigs sus scrofa in a remote Hawaiian rain forest

Feral pig Sus scrofa control in Kipahulu Valley, a remote rain forest in Haleakala National Park, Maui, Hawaiian Islands, has been achieved with snares over a 45-month period. Initial pig densities in fenced management units of 6·2 km 2 and 7·8 km 2 were estimated at 6 animals/km 2 and 14·3 animals/km 2 for the two units, based on population reconstruction from animals killed and aged. During the 45 months of the study, 1978 snares were set, and 1·6 million snare nights were logged. Snare density reached 96/km 2 and 200/km 2 for the two management units by the end of the study. A mean effort of 43 worker hours/pig was used to remove 53 pigs from the upper management unit, and a mean of 7 worker hours/pig to remove 175 animals from the more densely populated lower unit. Pig activity monitoring along transects provided a good measure of control effectiveness until densities of about 1 pig/km 2 were achieved, after which transects became less useful than scouting for determining pig activity.

Hawai'i↗