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USGS2023

Converted-wave reverse time migration imaging in subduction zone settings

We use a newly developed 2-D elastic reverse time migration (RTM) imaging algorithm based on the Helmholtz decomposition to test approaches for imaging the descending slab in subduction zone regions using local earthquake sources. Our elastic RTM method is designed to reconstruct incident and scattered wavefields at depth, isolate constituent P- and S- wave components via Helmholtz decomposition, and evaluate normalized imaging functions that leverage dominant P and S signals. This method allows us to target particular converted-wave scattering geometries, for example incident S to scattered P , which may be expected to have dominant signals in any given data set. The method is intended to be applied to dense seismic array observations that adequately capture both incident and converted wavefields. We draw a direct connection between our imaging functions and the first-order contrasts in shear wave material properties across seismic discontinuities. Through tests on synthetic data using either S → P or P → S conversions, we find that our technique can successfully recover the structure of a subducting slab using data from a dense wide-angle array of surface stations. We also calculate images with a small-aperture array to test the impact of array geometry on image resolution and interpretability. Our results show that our imaging technique is capable of imaging multiple seismic discontinuities at depth, even with a small number of earthquakes, but that limitations arise when a small aperture array is considered. In this case, the presence of artefacts makes it more difficult to determine the location of seismic discontinuities.

Geophysical Journal International↗

USGS2022

Give and take: Effects of genetic admixture on mutation load in endangered Florida panthers

Genetic admixture is a biological event inherent to genetic rescue programs aimed at the long-term conservation of endangered wildlife. Although the success of such programs can be measured by the increase in genetic diversity and fitness of subsequent admixed individuals, predictions supporting admixture costs to fitness due to the introduction of novel deleterious alleles are necessary. Here, we analyzed nonsynonymous variation from conserved genes to quantify and compare levels of mutation load (i.e. proportion of deleterious alleles and genotypes carrying these alleles) among endangered Florida panthers and non-endangered Texas pumas. Specifically, we used canonical (i.e. non-admixed) Florida panthers, Texas pumas, and F 1 (canonical Florida × Texas) panthers dating from a genetic rescue program and Everglades National Park panthers with Central American ancestry resulting from an earlier admixture event. We found neither genetic drift nor selection significantly reduced overall proportions of deleterious alleles in the severely bottlenecked canonical Florida panthers. Nevertheless, the deleterious alleles identified were distributed into a disproportionately high number of homozygous genotypes due to close inbreeding in this group. Conversely, admixed Florida panthers (either with Texas or Central American ancestry) presented reduced levels of homozygous genotypes carrying deleterious alleles but increased levels of heterozygous genotypes carrying these variants relative to canonical Florida panthers. Although admixture is likely to alleviate the load of standing deleterious variation present in homozygous genotypes, our results suggest that introduced novel deleterious alleles (temporarily present in heterozygous state) in genetically rescued populations could potentially be expressed in subsequent generations if their effective sizes remain small.

Journal of Heredity↗

USGS2023

Reference genome of an iconic lizard in western North America, Blainville’s horned lizard Phrynosoma blainvillii

Genome assemblies are increasingly being used to identify adaptive genetic variation that can help prioritize the population management of protected species. This approach may be particularly relevant to species like Blainville’s horned lizard, Phrynosoma blainvillii , due to its specialized diet on noxious harvester ants, numerous adaptative traits for avoiding predation (e.g. cranial horns, dorsoventrally compressed body, cryptic coloration, and blood squirting from the orbital sinuses), and status as Species of Special Concern in California. Rangewide decline since the early 20th century, the basis of its conservation status, has been driven mainly by habitat conversion, over-collecting, and invasion of a non-native ant that displaces its native ant prey base. Here, we report on a scaffold-level genome assembly for P. blainvillii as part of the California Conservation Genomics Project (CCGP), produced using Pacific Biosciences HiFi long reads and Hi-C chromatin-proximity sequencing technology. The de novo assembly has 78 scaffolds, a total length of ~2.21 Gb, a scaffold N50 length of ~352 Mb, and BUSCO score of 97.4%. This is the second species of Phrynosoma for which a reference genome has been assembled and represents a considerable improvement in terms of contiguity and completeness. Combined with the landscape genomics data being compiled by the CCGP, this assembly will help strategize efforts to maintain and/or restore local genetic diversity, where interventions like genetic rescue, translocation, and strategic land preservation may be the only means by which P. blainvillii and other low-vagility species can survive in the fragmented habitats of California.

California↗

USGS2025

Context matters: Intrinsic and extrinsic factors modulate habitat choices in an endangered forest bat

Effective management of declining species depends upon fundamental understanding of habitat preferences during key life stages such as reproduction. Peripheral populations of wildlife are often poorly understood and rarely the focus of study, despite their contribution to genetic diversity and their potential to aid in recolonization if a species becomes endangered. We assessed the maternal roost-site preferences of the endangered northern long-eared bat ( Myotis septentrionalis ) within a managed forest near the western edge of their range in the Black Hills region of Wyoming, USA. We further examined whether habitat preferences and roost-switching varied by reproductive state (pregnant or lactating) or proximate weather conditions. Bats were more likely to roost in quaking aspens during pregnancy, and when weather was cooler and wetter. Conversely, bats roosted more in ponderosa pines ( Pinus ponderosa) post-parturition, and when temperatures were warmer. Bats also were more likely to switch to a new roost after periods of warmer temperature and reduced solar radiation. Our results support growing evidence that habitat choices can be modulated proximately by intrinsic and extrinsic factors. Northern long-eared bats in the Black Hills relied on a variety of roost types, from healthy live trees to snags at different decay stages depending on reproductive stage and ambient weather. Our study highlights the importance of considering diverse contexts when characterizing habitat preferences, particularly for endangered species in a rapidly changing world.

Wyoming↗

USGS2016

Pika ( Ochotona princeps ) losses from two isolated regions reflect temperature and water balance, but reflect habitat area in a mainland region

Although biotic responses to contemporary climate change are spatially pervasive and often reflect synergies between climate and other ecological disturbances, the relative importance of climatic factors versus habitat extent for species persistence remains poorly understood. To address this shortcoming, we performed surveys for American pikas ( Ochotona princeps ) at > 910 locations in 3 geographic regions of western North America during 2014 and 2015, complementing earlier modern (1994–2013) and historical (1898–1990) surveys. We sought to compare extirpation rates and the relative importance of climatic factors versus habitat area for pikas in a mainland-versus-islands framework. In each region, we found widespread evidence of distributional loss—local extirpations, upslope retractions, and encounter of only old sign. Locally comprehensive surveys suggest extirpation of O. princeps from 5 of 9 new sites from the hydrographic Great Basin and from 11 of 29 sites in northeastern California. Although American pikas were recorded as recently as 2011 in Zion National Park and in 2012 from Cedar Breaks National Monument in Utah, O. princeps now appears extirpated from all reported localities in both park units. Multiple logistic regressions for each region suggested that both temperature-related and water-balance-related variables estimated from DAYMET strongly explained pika persistence at sites in the Great Basin and in Utah but not in the Sierra-Cascade “mainland” portion of northeastern California. Conversely, talus-habitat area did not predict American pika persistence in the Great Basin or Utah but strongly predicted persistence in the Sierra-Cascade mainland. These results not only add new areas to our understanding of long-term trend of the American pika’s distribution, but also can inform decisions regarding allocation of conservation effort and management actions. Burgeoning research on species such as O. princeps has collectively demonstrated the heterogeneity and nuance with which climate can act on the distribution of mountain-dwelling mammals.

Journal of Mammalogy↗

USGS2017

Walrus haul-out and in water activity levels relative to sea ice availability in the Chukchi Sea

An animal’s energetic costs are dependent on the amount of time it allocates to various behavioral activities. For Arctic pinnipeds, the time allocated to active and resting behaviors could change with future reductions in sea ice cover and longer periods of open water. The Pacific walrus ( Odobenus rosmarus divergens ) is a large Arctic pinniped that rests on sea ice or land between foraging trips to feed on the seafloor. We used behavioral data collected from radiotagged walruses in the Chukchi Sea (2008–2014) in a Bayesian generalized linear mixed effects model to estimate the probability a walrus was in water foraging, in water not foraging, or hauled out, as a function of environmental covariates. The probability of a walrus being in water increased with wind speed and decreased with air temperature, and the probability a walrus was foraging, given it was in water, increased with available benthic macrofaunal biomass. The probability of each behavior was also related to the nature and availability of haul-out substrates. The amount of time walruses spent in water foraging and hauled out was greatest when only sea ice was available, which typically occurs when walruses occupy feeding areas during summer and early autumn. This situation may be most energy efficient for walruses because it allows the highest proportion of in water energy expenditure to be allocated to foraging. Conversely, the amount of time walruses spent in water foraging and hauled out was lowest when only land was available, which typically occurs in late autumn, in years when walruses were constrained to land haul-outs because sea ice was absent over the continental shelf.

Chukchi Sea↗

USGS2023

Effects of landscape cover and yard features on feral and free-roaming cat (Felis catus) distribution, abundance and activity patterns in a suburban area

Feral and free-roaming domestic cats ( Felis catus ) are invasive predators throughout the world. In some areas, cats occur in higher densities than native mammalian predators and can have severe effects upon prey populations. We set 48 wildlife game cameras in residential yards in Arkansas, USA, to evaluate which landscape and yard features influenced cat abundance occurring in yards. In addition, we quantified the daily activity patterns of free-roaming cats and explored how habitat features or predator activity influenced the timing of cat activity. We found that cats were present in 70.8% of yards with an average of three recognizable individuals per yard. Abundance of cats was higher than all native mesopredators except for raccoon ( Procyon lotor ) and Virginia opossum ( Didelphis virginiana ). Cat abundance and minimum population decreased when forest cover was high within 400 m of the camera. Cats were active at all times of the day but tended to be more diurnal in areas closer to city centers or in agricultural settings. Conversely, cats were more nocturnal later in the summer and in areas that had high levels of predator activity. Our results indicate that cats are widespread in this region and their relative abundance is driven more by landscape features than by yard features, possibly due to their large home ranges. Cats may alter their activity to better coexist with predators. Alteration in yard features is unlikely to be an effective deterrent for cats and more direct control measures may be necessary.

Arkansas↗

USGS2025

Revised length categories and standard weight equation for Northern Pikeminnow

Objective Length and weight indices (e.g., proportional size distribution, relative weight) provide standardized benchmarks that are useful for comparing groups of fish, identifying ecological interactions, and evaluating the effect of management actions. However, the current length categories and standard weight ( W s ) equation for Northern Pikeminnow Ptychocheilus oregonensis , a species of important management focus in the Pacific Northwest, were developed using limited data, unclear methods, and no validation. As such, we sought to revise the length categories and W s equation for Northern Pikeminnow. Methods We used the all-tackle world record to develop length categories for Northern Pikeminnow. We compiled data from 100,663 Northern Pikeminnow from 114 populations in Idaho, Montana, Oregon, Washington, and British Columbia to develop a revised W s equation. Most fish were measured in fork length (FL), so we converted total lengths (TLs) to FLs using the equation TL = −2.301 + 0.916(FL); r 2 = 0.998. We used the regression line percentile, linear empirical percentile (EmP), and quadratic EmP methods to develop 50th percentile and 75th percentile W s equations. We then assessed length-related biases in our W s equations and the previously published equation. Results We propose minimum FLs of 17 cm (7 inches; stock), 26 cm (10 inches; quality), 35 cm (14 inches; preferred), 41 cm (16 inches; memorable), and 51 cm (20 inches; trophy) for proportional size distribution calculations. The previously published W s equation exhibited substantial length-related biases according to the Willis and weighted empirical quartile method tests. The EmP 50th-percentile W s equation was the only equation that we evaluated that did not exhibit length-related bias. The EmP 50th-percentile W s equation was the best performing equation (i.e., no length-related bias detected). The equation is log 10 ( W s ) = −5.258 + 3.135(FL), where W s is in grams and FL is in millimeters. The equation is valid for Northern Pikeminnow 90–580 mm FL. Conclusion The length categories, length conversion, and W s equation presented here will aid fisheries professionals in the study and management of Northern Pikeminnow populations.

British Columbia, Idaho, Montana, Oregon Washingto↗

USGS2019

Case studies in groundwater contaminant fate and transport

A case study of groundwater contamination is a detailed study of a single site contaminated with a chemical or mixture that is known to be a problem at many sites. The goal of case studies is to provide insights into the physical, chemical, and biological processes controlling migration, natural attenuation, or remediation of common groundwater contaminants. Ideally, processes occurring at a case study site are representative of other sites so that knowledge gained from these intensive studies can be applied at thousands of sites where fewer data are available. Several characteristics of case studies contribute to their value. First, they may have tens to hundreds of monitoring wells, compared to fewer than ten wells at some contaminated sites. Second, some case studies continue for many years or even decades, providing insights into temporal progression of slow processes. Third, analytical methods prohibitively expensive for routine use or under development may be tested at case study sites. Finally, the ongoing characterization typical of case study sites builds a foundation of knowledge that facilitates sophisticated experimental design and testing of new methods. This article is divided into sections based on the contaminant type because the chemical and biological processes required for remediation vary for each contaminant. Most importantly, some contaminants can be biodegraded whereas metals and radionuclides cannot be destroyed but can be immobilized or rendered less toxic. The emphasis is on case studies of natural processes that control the fate and transport of contaminants in groundwater rather than on active remediation methods. The principles learned from these studies may form the basis for design of remedial strategies. The organic contaminants are divided into: petroleum hydrocarbons, fuel oxygenates, coal tar and wastes from manufactured gas plants, and chlorinated solvents. The inorganic contaminants covered are metals and radionuclides, arsenic, and nitrate. Case studies of mixed waste plumes from landfills are also described. Experimental sites where contaminants have been introduced into an aquifer as an emplaced source or a controlled release may not meet the above definition of case studies, but some are included because the overall goal is to impart lessons learned from detailed field studies. It is impossible to cover all case studies in this short format. Conversely, focusing on one or two does not convey the breadth of research results in entire range of case studies. Instead, the strategy is to describe the evolution of knowledge for each contaminant class while providing citations of relevant case studies. Much of the progress in understanding of the fate of contaminants in groundwater is based on laboratory studies; thus whenever possible, papers that included both field and laboratory results have been included among the citations. Two topics of growing importance have not been covered. These are the fate of pharmaceuticals in groundwater and discharge of contaminant plumes to surface water. These topics merit coverage in the future as knowledge grows and case studies increase in number.

Environmental Science↗

USGS2021

Offspring of translocated individuals drive the successful reintroduction of Columbian Sharp-tailed Grouse in Nevada, USA

Translocations of North American prairie-grouse (genus Tympanuchus ) present a conservation paradox wherein they are performed to augment, restore, or reintroduce populations, but translocated individuals exhibit a diminished ability to contribute to population restoration. For reintroduced populations without immigration, persistence can only be achieved through reproductive contributions by translocated individuals and their progeny. Due to the disruptive nature of translocation (e.g., physiological chronic stress), progeny produced at restoration sites may outperform founder populations in terms of demographics, but this hypothesis has yet to be tested. We reintroduced Columbian Sharp-tailed Grouse ( T. phasianellus columbianus ; CSTG) to north central Nevada from 2013 to 2017 and used integrated population models (IPMs) to evaluate the process of population establishment and estimate latent contributions of progeny hatched at the restoration site to population rate of change ( ⁠ λ ^ "> λ ^ ⁠ ). Specifically, we used annual lek (i.e. communal breeding arenas) counts and demographic data from translocated individuals to build two separate IPMs to estimate λ ^ "> λ ^ ⁠ . While keeping demographic contributions by translocated individuals identical between models, one IPM assumed local progeny performance was demographically similar to translocated individuals (i.e. the baseline-IPM), and the second assumed that local progeny performed demographically similar to non-translocated CSTG (i.e. the informative-IPM). The baseline-IPM predicted strong population declines following the conclusion of translocations and extirpation by 2020, and it failed to predict observed lek counts. Conversely, the informative-IPM predicted population growth rates ( ⁠ λ ^ "> λ ^ = 1.17, 95% credible interval [CI]: 0.74–1.50) that were more similar to field observations. Offspring of translocated individuals likely perform at similar levels to non-translocated populations, and by not accounting for demographic differences between translocated individuals and non-translocated progeny hatched at the restoration site, managers could underestimate population performance and persistence. Thus, translocation practices that maximize the number of offspring immediately recruited into restoration sites are likely to be the most successful.

Nevada↗

USGS2025

Landscape changes and declines in Aquila chrysaetos (Golden Eagle) territory occupancy in southwestern Idaho

Rapid loss of native shrubs and expansion of invasive annual plants like cheatgrass ( Bromus tectorum ) have altered North American shrub-steppe systems across extensive areas. Predators, like Aquila chrysaetos (Golden Eagle) that forage on shrub-reliant prey, may abandon historically occupied territories or increase their territory size to cope with degraded habitat. We used a multiseason Bayesian occupancy model that accounted for imperfect detection to investigate the associations between landscape cover, fire history, conspecific neighbor density, and occupancy of 36 A. chrysaetos territories in southwestern Idaho and the Morley Nelson Snake River Birds of Prey National Conservation Area, USA from 1986 to 2022. The probability of A. chrysaetos occupancy at historically occupied territories decreased 25% from 1986 to 2022 (0.83–0.58). Once territories became vacant for 5 yr, they tended to remain vacant, suggesting that they were no longer suitable for eagles, or that no new eagles were recruiting into the population. Territory occupancy was positively associated with shrub cover ( β : 0.90, 95% CrI: 0.12 to 1.71) and negatively (albeit weakly) associated with annual herbaceous cover ( β : –0.63, 95% CrI: –1.32 to 0.05). Territories closer to other occupied territories had a lower probability of occupancy than territories with distant neighbors ( β : –3.89, 95% CrI: –4.61 to –3.14), likely because eagles compensated for degraded habitat by expanding their territories. Years since the territory last burned had a slightly positive effect on occupancy with high uncertainty and a credible interval that overlapped 0 ( β : 0.28, 95% CrI: –0.26 to 0.87). The probability of detecting eagles in an occupied territory was high (0.90) and improved in surveys conducted earlier in the day and later in the breeding season. Shrub conversion to invasive grasslands has negative bottom-up consequences on A. chrysaetos territory occupancy, which may decrease the local carrying capacity for eagles in this area.

Idaho↗

USGS2026

Birds, breakpoints, and baselines: How citizen science data can reveal ecological boundaries in Kenya’s Upper Tana watershed

Tropical watersheds are increasingly threatened by climate change, land-use conversion, and resource extraction, yet conventional biodiversity monitoring in these systems is often spatially and temporally limited. Citizen science offers a complementary approach, enabling biodiversity data collection over large areas that can supplement professional scientific surveys. We analyzed 10 years (2012–2022) of Upper Tana Watershed bird data from the Kenya Bird Map project, covering 114 pentads (9 × 9 km) within a 17,000 km 2 watershed to assess patterns of bird community composition and distribution across this watershed and to also evaluate the effects of environmental variables, seasonality, and sampling effort to help inform improvements in future citizen science projects. Citizen (or community) scientists recorded 575 species (>50% of Kenya’s total avifauna) in 74 families. Asymptotic species accumulation indicates that most probable species present in the watershed were detected. Threshold indicator taxa analysis revealed distinct ecological boundaries along elevation (∼1,500 m), precipitation (∼1,100 mm), and mean temperature (∼19°C) gradients, corresponding to a turnover from xeric savanna to mesic montane forest assemblages. Notably, bird communities showed little seasonal differentiation between wet and dry periods, consistent with dominance by resident year-round species. Data limitations including uneven survey distribution and frequency, absence of abundance metrics, and coarse representation of local environmental conditions that likely reduced our ability to detect fine-scale species–habitat relationships. Addressing these gaps through spatially balanced sampling at greater resolution, greater survey frequency in underrepresented areas, and improved capture of habitat metrics could strengthen the use of citizen-science bird data for watershed bioassessment. Our findings demonstrate that structured citizen-science initiatives can identify ecological boundaries and inform adaptive management of tropical socio-ecological systems under rapid environmental change.

Upper Tana watershed↗

USGS1963

Properties of synthetic triclinic KFeSi3O8, iron-microcline, with some observations on the iron-microcline⇌iron-sanidine transition

Triclinic KFeSi 3 O 8 , iron-microcline, has been synthesized from oxide mixes and by complete conversion of monoclinic KFeSi 3 O 8 , iron-sanidine. Iron-microcline is triclinic, C ī, a =8·68±0·01 Å, b =13·10±0·01, c =7·34±0·01, α =90° 45′±10′, β =116° 03′±10′, γ=86°14′±10′. The optical properties (Na light) are: α =1·585±0·002, β =1·596±0·002, γ=1·605±0·002, 2 V α =85° (calc.), X≈ b , Z ∧ c =20°±5°. A reversible phase transition between triclinic and monoclinic KFeSi 3 O 8 occurs at 704°±6° C at 2000 bars total pressure. Iron-microcline is the low-temperature polymorph; no intermediate polymorphs were observed in either hydrothermal or dry heating experiments.

Journal of Petrology↗

USGS2022

The geochemical and textural transition between the Reef Package and its hanging wall, Stillwater Complex, Montana, USA

The highest grade Pd-Pt deposit on Earth, the J-M Reef, is hosted in coarse-grained to pegmatoidal cumulates called the Reef Package. Decades of mine development of the J-M Reef have revealed that a distinct discontinuity in rock fabric marks the top of the rock unit that hosts economic-grade sulfide mineralization. Mine geologists refer to this discontinuity as the hanging wall contact. This contact is the top of the Reef Package and is always locatable—either by the change in rock fabric or by distinctive hanging wall textures of silicate minerals—even when the reef sulfide mineralization is absent. This rather subtle textural feature is used reliably by mine geologists to follow the Reef during exploration and mine development. Although some high tenor sulfides (>1000 ppm Pd in 100% sulfide) are found sporadically in the hanging wall cumulates, these accumulations are too small to be economically viable. We present quantitative rock fabric data for four Reef Package and hanging wall intersections collected by electron back-scattered diffraction (EBSD). Plagioclase fabrics in the hanging wall are characterized by low variance in grain sizes and a strong point maximum concentration of (010) and a perpendicular girdle distribution of [100] consistent with an axial B-type fabric. These fabrics are indicative of either compaction of the crystal mush or crystal settling of nucleated crystals, the bulk magma in a chamber. Conversely, the fabrics of the Reef Package show higher variance grain in size distributions and weak to undeveloped preferred orientation of plagioclase crystals that did not undergo significant alignment or textural equilibration of plagioclase grains. The absence of foliation in the Reef Package stands in contrast both to hanging wall fabrics and to other reported EBSD datasets of plagioclase crystals orientations from the Bushveld Complex, the Skaergaard Intrusion, and the Rum Intrusion. Furthermore, plagioclase crystal size distributions for the Reef Package show flatter slopes and convex profiles with fewer crystals at small size fractions indicating the dissolution of small crystals during partial melting and textural coarsening (i.e . Ostwald ripening) and crystal growth. Crystal growth was favored over the nucleation of new crystals during prolonged interaction with a hot infiltrating melt into the resident mush resulting in the coarse-grained textures of the Reef Package cumulates. The hanging wall contact represents a boundary between partially remelted crystal mush of the Reef Package, where sulfide mineralization formed and accumulated, and an overlying essentially barren cumulate pile. The hanging wall cumulates formed following the cessation of footwall erosion and the resumption of crystal accumulation by normal magma chamber processes.

Montana↗

USGS2015

Coupled interactions between volatile activity and Fe oxidation state during arc crustal processes

Arc magmas erupted at the Earth’s surface are commonly more oxidized than those produced at mid-ocean ridges. Possible explanations for this high oxidation state are that the transfer of fluids during the subduction process results in direct oxidation of the sub-arc mantle wedge, or that oxidation is caused by the effect of later crustal processes, including protracted fractionation and degassing of volatile-rich magmas. This study sets out to investigate the effect of disequilibrium crustal processes that may involve coupled changes in H 2 O content and Fe oxidation state, by examining the degassing and hydration of sulphur-free rhyolites. We show that experimentally hydrated melts record strong increases in Fe 3+ /∑Fe with increasing H 2 O concentration as a result of changes in water activity. This is relevant for the passage of H 2 O-undersaturated melts from the deep crust towards shallow crustal storage regions, and raises the possibility that vertical variations in f O 2 might develop within arc crust. Conversely, degassing experiments produce an increase in Fe 3+ /∑Fe with decreasing H 2 O concentration. In this case the oxidation is explained by loss of H 2 as well as H 2 O into bubbles during decompression, consistent with thermodynamic modelling, and is relevant for magmas undergoing shallow degassing en route to the surface. We discuss these results in the context of the possible controls on f O 2 during the generation, storage and ascent of magmas in arc settings, in particular considering the timescales of equilibration relative to observation as this affects the quality of the petrological record of magmatic f O 2 .

Journal of Petrology↗

USGS2015

Mechanisms and timescales of generating eruptible rhyolitic magmas at Yellowstone caldera from zircon and sanidine geochronology and geochemistry

We constrain the physical nature of the magma reservoir and the mechanisms of rhyolite generation at Yellowstone caldera via detailed characterization of zircon and sanidine crystals hosted in three rhyolites erupted during the (ca. 170 – 70 ka) Central Plateau Member eruptive episode – the most recent post-caldera magmatism at Yellowstone. We present 238U-230Th crystallization ages and trace-element compositions of the interiors and surfaces (i.e., unpolished rims) of individual zircon crystals from each rhyolite. We compare these zircon data to 238U- 230Th crystallization ages of bulk sanidine separates coupled with chemical and isotopic data from single sanidine crystals. Zircon age and trace-element data demonstrate that the magma reservoir that sourced the Central Plateau Member rhyolites was long-lived (150 – 250 kyr) and genetically related to the preceding episode of magmatism, which occurred ca. 256 ka. The interiors of most zircons in each rhyolite were inherited from unerupted material related to older stages of Central Plateau Member magmatism or the preceding late Upper Basin Member magmatism (i.e., are antecrysts). Conversely, most zircon surfaces crystallized near the time of eruption from their host liquids (i.e., are autocrystic). The repeated recycling of zircon interiors from older stages of magmatism demonstrates that sequentially erupted Central Plateau Member rhyolites are genetically related. Sanidine separates from each rhyolite yield 238U-230Th crystallization ages at or near the eruption age of their host magmas, coeval with the coexisting zircon surfaces, but are younger than the coexisting zircon interiors. Chemical and isotopic data from single sanidine crystals demonstrate that the sanidines in each rhyolite are in equilibrium with their host melts, which considered along with their near-eruption crystallization ages suggests that nearly all CPM sanidines are autocrystic. The paucity of antecrystic sanidine crystals relative to antecrystic zircons require a model where eruptible rhyolites are generated by extracting melt and zircons from a long-lived mush of immobile crystal-rich magma. In this process the larger sanidine crystals remain trapped in the locked crystal network. The extracted melts (plus antecrystic zircon) amalgamate into a liquid dominated (i.e., eruptible) magma body that is maintained as a physically distinct entity relative to the bulk of the long-lived crystal mush. Zircon surfaces and sanidines in each rhyolite crystallize after melt extraction/amalgamation and their ages constrain the residence time of eruptible magmas at Yellowstone. Residence times of the large volume rhyolites (~40 – 70 km3) are ≤ 1 kyr (conservatively < 6 kyr), which suggests that large volumes of rhyolite can be generated rapidly by extracting melt from a crystal mush. Because the lifespan of the crystal mush that sourced the Central Plateau Member rhyolites is two orders of magnitude longer than the residence time of eruptible magma bodies within the reservoir, it is apparent that the Yellowstone magma reservoir spends most of its time in a largely-crystalline (i.e., uneruptible) state, similar to the present-day magma reservoir, and that eruptible magma bodies are ephemeral features.

Idaho, Wyoming↗

USGS2018

Practical tips to establish an actionable science portfolio for climate adaptation

The delivery of climate adaptation science products and services to inform resource management decisions—otherwise known as actionable climate adaptation science—is the primary driver and intended outcome of the science portfolios administered within the Department of the Interior's Climate Adaptation Science Center (CASC) network in the USA. This commitment hinges on the essential requirement that natural and cultural resource managers (science users) and scientists (science producers) work in unison with one another. This partnership may be illustrated by the conventional demand and supply relationship, where resource managers create the demand term by explicitly describing a priori top decisions or priority actions concerning the natural or cultural resources they administer, and scientists supply relevant research products and services. But an ideal interaction of users and producers is not trivial and presents challenges in the process of establishing an actionable science portfolio. A few practical suggestions are presented here to set up a productive dialogue between resource managers and scientists, and broker that conversation as they work side-by-side toward agreed-upon common objectives. These useful tips stem from working towards the goal of establishing actionable science portfolios within the CASC network and may prove valuable to similar entities committed to delivering climate adaptation science to address resource management concerns.

Science and Public Policy↗

USGS2025

Decadal stability in stream fish communities and contemporary ecological drivers of species occupancy in two Appalachian U.S. National Parks

Objective Although conserving fish biodiversity in lotic systems is challenging, protected areas can provide refuge from certain environmental stressors. In the Appalachian region, USA, the National Park Service manages Delaware Water Gap National Recreation Area (DEWA) and New River Gorge National Park & Preserve (NERI), which contain abundant and diverse freshwater resources. To assess the effectiveness of these protected areas in conserving stream fishes, we evaluated decadal changes and ecological drivers of species occupancy and detection. Methods Using fish assemblage data from backpack electrofishing surveys conducted in both parks during 2013–2014 and 2022–2023, we quantified temporal differences in species occupancy and detection probabilities using a Bayesian hierarchical multispecies occupancy modeling approach. For the 2022–2023 survey, we included habitat variables as predictors of occupancy and detection. Results Community composition and occupancy probabilities for species in both parks remained similar through time, with the most recent occupancy estimates ranging from 0.07 (90% CI = 0.02, 0.14) for Variegate Darter Etheostoma variatum and Rainbow Darter E. caeruleum to 0.73 (90% credible interval = 0.59, 0.85) for Blacknose Dace Rhinichthys atratulus . Changes in occupancy were more prominent at Delaware Water Gap National Recreation Area than New River Gorge National Park & Preserve, with Yellow Perch Perca flavescens having a posterior mean difference of −0.17 [90% credible interval = −0.35, −0.01] and American Eel Anguilla rostrata having a high posterior probability (>80%) of occupancy increasing by at least 1%. Habitat variables were related to community structure, but effects varied in significance, magnitude, and direction among species and parks. Conversely, species-specific detection probabilities were comparatively less affected by environmental and sampling effort predictors. Conclusions Between 2013 and 2023, occupancy estimates for 44 fish species across two protected, ecologically diverse landscapes remained relatively stable. Furthermore, we highlight the efficacy of national parks in maintaining freshwater fish biodiversity amidst rapid global change.

New Jersey, Pennsylvania, West Virginia↗