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Climate impacts to inland fishes: Shifting research topics over time

Climate change remains a primary threat to inland fishes and fisheries. Using topic modeling to examine trends and relationships across 36 years of scientific literature on documented and projected climate impacts to inland fish, we identify ten representative topics within this body of literature: assemblages, climate scenarios, distribution, climate drivers, population growth, invasive species, populations, phenology, physiology, and reproduction. These topics are largely similar to the output from artificial intelligence application (i.e., ChatGPT) search prompts, but with some key differences. The field of climate impacts on fish has seen dramatic growth since the mid-2000s with increasing popularity of topics related to drivers, assemblages, and phenology. The topics were generally well-dispersed with little overlap of common words, apart from phenology and reproduction which were closely clustered. Pairwise comparisons between topics revealed potential gaps in the literature including between reproduction and distribution and between physiology and phenology. A better understanding of these relationships can help capitalize on existing literature to inform conservation and sustainable management of inland fishes with a changing climate.

PLOS Climate↗

Quantifying the demographic cost of human-related mortality to a raptor population

Raptors are exposed to a wide variety of human-related mortality agents, and yet population-level effects are rarely quantified. Doing so requires modeling vital rates in the context of species life-history, behavior, and population dynamics theory. In this paper, we explore the details of such an analysis by focusing on the demography of a resident, tree-nesting population of golden eagles ( Aquila chrysaetos ) in the vicinity of an extensive (142 km 2 ) windfarm in California. During 1994–2000, we tracked the fates of >250 radio-marked individuals of four life-stages and conducted five annual surveys of territory occupancy and reproduction. Collisions with wind turbines accounted for 41% of 88 uncensored fatalities, most of which were subadults and nonbreeding adults (floaters). A consistent overall male preponderance in the population meant that females were the limiting sex in this territorial, monogamous species. Estimates of potential population growth rate and associated variance indicated a stable breeding population, but one for which any further decrease in vital rates would require immigrant floaters to fill territory vacancies. Occupancy surveys 5 and 13 years later (2005 and 2013) showed that the nesting population remained intact, and no upward trend was apparent in the proportion of subadult eagles as pair members, a condition that would have suggested a deficit of adult replacements. However, the number of golden eagle pairs required to support windfarm mortality was large. We estimated that the entire annual reproductive output of 216–255 breeding pairs would have been necessary to support published estimates of 55–65 turbine blade-strike fatalities per year. Although the vital rates forming the basis for these calculations may have changed since the data were collected, our approach should be useful for gaining a clearer understanding of how anthropogenic mortality affects the health of raptor populations, particularly those species with delayed maturity and naturally low reproductive rates.

PLoS ONE↗

Identifying reliable indicators of fitness in polar bears

Animal structural body size and condition are often measured to evaluate individual health, identify responses to environmental change and food availability, and relate food availability to effects on reproduction and survival. A variety of condition metrics have been developed but relationships between these metrics and vital rates are rarely validated. Identifying an optimal approach to estimate the body condition of polar bears is needed to improve monitoring of their response to decline in sea ice habitat. Therefore, we examined relationships between several commonly used condition indices (CI), body mass, and size with female reproductive success and cub survival among polar bears ( Ursus maritimus ) measured in two subpopulations over three decades. To improve measurement and application of morphometrics and CIs, we also examined whether CIs are independent of age and structural size–an important assumption for monitoring temporal trends—and factors affecting measurement precision and accuracy. Maternal CIs and mass measured the fall prior to denning were related to cub production. Similarly, maternal CIs, mass, and length were related to the mass of cubs or yearlings that accompanied her. However, maternal body mass, but not CIs, measured in the spring was related to cub production and only maternal mass and length were related to the probability of cub survival. These results suggest that CIs may not be better indicators of fitness than body mass in part because CIs remove variation associated with body size that is important in affecting fitness. Further, CIs exhibited variable relationships with age for growing bears and were lower for longer bears despite body length being related to cub survival and female reproductive success. These results are consistent with findings from other species indicating that body mass is a useful metric to link environmental conditions and population dynamics.

PLoS ONE↗

Clearcut stand size and scrub-successional bird assemblages

We investigated the effects of clearcut stand size on species richness, reproductive effort, and relative abundance of scrub-successional birds and the entire bird assemblage at the Savannah River Site in South Carolina. We used standardized mist-net grids to mark and recapture birds in clearcuts replanted with longleaf pine ( Pinus palustris ) in stands of 2 to 57 ha that were two to six years old. Species richness for the entire bird assemblage was not explained by stand size ( P = 0.67), stand age ( P = 0.95), or the interaction of these two variables ( P = 0.90). Similarly, species richness of scrub-successional birds was not explained by stand size ( P = 0.63), stand age ( P = 0.55), or the interaction of stand size and stand age ( P = 0.35). Regressing species richness on clearcut stand size, we found a significant negative relationship between these variables for the entire bird assemblage ( P = 0.01) and for scrub-successional birds ( P = 0.02). The ratio of juveniles to adults in mist-net samples varied by year ( P = 0.04), but neither clearcut size ( P = 0.23) nor the interaction of clearcut size and year ( P = 0.25) was related to the ratio of juveniles to adults in the sample. We found no relationship between the frequency of capture of any category of birds and stand size (scrub-successional, P = 0.52; woodland, P = 0.77; combined sample, P = 0.55). Neither bird-species richness, reproductive effort, nor relative abundance differed across clearcut stand sizes. Clearcut stand size does not appear to be an important management variable if variation in species richness, reproductive effort, or relative abundance are objectives. We suggest that even-aged forestry is a useful tool for managing birds in the southeastern United States.

The Auk↗

Multiple plumage traits convey information about age and within-age-class qualities of a canopy-dwelling songbird, the Cerulean Warbler

Colorful plumage traits in birds may convey multiple, redundant, or unreliable messages about an individual. Plumage may reliably convey information about disparate qualities such as age, condition, and parental ability because discrete tracts of feathers may cause individuals to incur different intrinsic or extrinsic costs. Few studies have examined the information content of plumage in a species that inhabits forest canopies, a habitat with unique light environments and selective pressures. We investigated the information content of four plumage patches (blue-green crown and rump, tail white, and black breast band) in a canopy-dwelling species, the Cerulean Warbler ( Setophaga cerulea ), in relation to age, condition, provisioning, and reproduction. We found that older males displayed wider breast bands, greater tail white, and crown and rump feathers with greater blue-green (435–534 nm) chroma and hue than males in their first potential breeding season. In turn, older birds were in better condition (short and long term) and were reproductively superior to younger birds. We propose that these age-related plumage differences (i.e. delayed plumage maturation) were not a consequence of a life history strategy but instead resulted from constraints during early feather molts. Within age classes, we found evidence to support the multiple messages hypothesis. Birds with greater tail white molted tails in faster, those with more exaggerated rump plumage (lower hue, greater blue-green chroma) provisioned more, and those with lower rump blue-green chroma were in better condition. Despite evidence of reliable signaling in this species, we found no strong relationships between plumage and reproductive performance, potentially because factors other than individual differences more strongly influenced fecundity.

The Auk↗

Roost selection by western long-eared myotis (Myotis evotis) in burned and unburned piñon–juniper woodlands of southwestern Colorado

All 16 species of bats known to occur in western Colorado are found at Mesa Verde National Park (MVNP) in the southwestern United States. Since 1996, wildfires have burned more than 70% of MVNP (> 15,000 ha), potentially altering food and roosting resources for bats. During the summers of 2006–2007, we investigated roost use by reproductive female western long-eared myotis ( Myotis evotis ). We located 33 bat roosts in rock crevices and 1 in a juniper snag. All but 2 of the roosts were in unburned habitat. Bats roosted alone or in small groups (≤3 individuals) and switched roosts frequently (1–7 roosts per bat, median = 1.5 roosts per bat, SE = 0.5 roosts per bat). We compared occupied roosts with randomly selected unoccupied crevices and used an information theoretic approach to determine which variables were most important in determining roost use at microhabitat and landscape scales. At the microhabitat scale, maternity roosts were higher above the ground and deeper than random, unoccupied rock crevices. At the landscape scale, roosts were closer to water and farther from burned habitat than random crevices, providing reproductive female M. evotis with the best opportunities to drink and forage for insects. Tree roosts are apparently not a vital resource for reproductive female M. evotis during the summer months at our study site, presumably because of the extensive availability of rock crevices. Understanding site-specific roosting behavior is important for proper management of bat populations because differences can exist between geographic regions, even among areas with similar plant communities.

Colorado↗

Dungeness crab, Cancer magister , do not extrude eggs annually in southeastern Alaska: An in situ study

The reproductive biology of female Dungeness crabs was studied with crab-pot and dive-transect sampling in five bays within or near Glacier Bay National Park and Preserve, southeastern Alaska, in April and September yearly from 1992 to 1998. A large percentage of nonovigerous, mature females was found in April, a time when females were expected to be brooding eggs that hatch in May and June. Our study examined differences between ovigerous and nonovigerous females collected in April and September samples to corroborate our previous laboratory study in which we found nonannual egg extrusion among Dungeness crabs. Seasonal differences in the catches of ovigerous and nonovigerous females, crab sizes, shell condition, and appendage injury were examined. Additionally, all crabs collected from two bays were tagged beginning in the fall of 1995; tagging was conducted twice annually. Our pot and dive data indicate that females, particularly larger ones, do not extrude eggs annually. Larger females have lower molting probabilities, which limits mating potential and increases reliance on stored sperm. The tagging study confirmed that at least some females do not extrude eggs in one year and then extrude eggs at a later time without molting, thus skipping at least one reproductive season. A reproductive cycle of Dungeness crabs in Alaska is introduced which includes earlier egg extrusion by larger females and nonannual egg extrusion.

Journal of Crustacean Biology↗

Life-history notes on Cambarus hubbsi creaser (Hubbs crayfish) from the South Fork Spring River, Arkansas

Many crayfish species native to the southeastern United States are imperiled due to small range sizes and anthropogenic impacts such as habitat loss and introduction of non-native species. Furthermore, effective management of crayfish is limited by the scarcity of life-history and ecological data for many of these species. We report results of the first life-history study of the crayfish Cambarus hubbsi (Hubbs Crayfish). We collected 466 Hubbs Crayfish from the South Fork Spring River, AR throughout 2006 and recorded carapace lengths, wet weights, indicators of reproductive activity, and number of eggs on ovigerous females. Using length-frequency distributions, we identified four Hubbs Crayfish age classes and evaluated growth rates by plotting size by season (winter, spring, summer, autumn). Male Hubbs Crayfish were more common than females in all seasons except autumn, and males weighed more at equivalent lengths than females. Reproductive activity in Hubbs Crayfish peaked in late winter and spring, and ovigerous females were collected in March, April, and June. Ovigerous females were age II or III and carried few eggs relative to co-occurring crayfish of the genus Orconectes. Compared to these Orconectes species, Hubbs Crayfish is comparatively slow growing, long lived, with low reproductive potential, and as a result may be categorized as a K life-history strategist. Based on this species' life-history strategy and previously documented habitat specificity and taxonomic distinctiveness, Hubbs Crayfish may require monitoring and management attention normally reserved for species with smaller ranges.

Southeastern Naturalist↗

Not so fatal attraction: Captive female Burmese Python lures do not improve wild python detection

The ongoing invasion of Python bivittatus (Burmese Python; henceforth, Python) across the Greater Everglades Ecosystem (GEE) has led to near total collapse of the affected mammal community over the past few decades. Management efforts to eliminate Pythons and control their spread have been hampered by the Python's low detectability, which may be improved by using a lure. In controlled settings, male Pythons show an attraction to the scent from reproductively active females. To test the effectiveness of using reproductively active female Pythons as a lure for attracting wild male Pythons in the field, we conducted a paired experiment with wild-caught female Pythons in pens and empty control pens. We monitored Python visitation at all sites using camera traps, which resulted in >3,000,000 photographs that we filtered to 4 independent detections of Pythons using AI software. Python detection was low at sites with female Pythons (3 observations) and control sites (1 observation) over 90 days at 12 sites. Stress associated with captivity may have halted reproductive females from producing pheromones, eliminating the chemosensory cue that lures males. Identifying and implementing husbandry techniques to reduce stress in wild-caught female Pythons could improve the effectiveness of this technique. Little is currently known about the chemical ecology of Pythons, and pheromonal communication in particular, and further research in this area could aid in the identification and production of effective, low-cost lures to increase detection and removal of this invasive species.

Florida↗

Interactive effects of food supplementation and snake fungal disease on pregnant Pygmy Rattlesnakes and their offspring

In viviparous organisms, the ability to feed while pregnant may mitigate energetic trade-offs experienced during the reproductive process and enhance fecundity. However, anorexia during pregnancy has been reported in many crotaline snakes. The potential costs and benefits of feeding while pregnant are not completely described in the literature, and experimental studies have been conducted in a limited number of taxa, rendering our understanding of the forces that may underlie the evolution of anorexia in pregnant snakes incomplete. Here, we examine the impact of food supplementation during mid to late pregnancy on mothers and offspring in a viviparous crotaline snake species, the Pygmy Rattlesnake ( Sistrurus miliarius ). Specifically, we offered multiple large meals to mothers held in outdoor enclosures and measured a suite of maternal and offspring traits including maternal body condition, offspring length and mass, maternal disease state, and offspring foraging behaviors. We focused on interactions between feeding, clinical signs of snake fungal disease (SFD), and the presence of its causative agent, Ophidiomyces ophiodiicola , in mothers. Pregnant females fed readily when offered food, but feeding did not impact offspring traits. Food supplementation significantly increased maternal postparturient body condition, but also increased clinical signs of disease in mothers and led to a significantly higher reproductive failure rate in the treatment group, particularly in mothers afflicted with SFD. Our results suggest that food supplementation during pregnancy may disrupt the reproductive process in pregnant rattlesnakes, and that such disruption is particularly pronounced in mothers suffering from SFD.

Journal of Herpetology↗

Organochlorine contaminants in the American White Pelican breeding at Pyramid Lake, Nevada

Reproductive success of the American White Pelican ( Pelecanus erythrorhynchos ) was monitored at a breeding colony on Anaho Island, Pyramid Lake, Nevada in 1996. Eggs were collected in 1988 and 1996 and analyzed for organochlorine pesticides (OCs) and total polychlorinated biphenyls (PCBs). Muscle from adults found dead or debilitated and euthanized, fishes from representative feeding areas and regurgitated fish samples from nestlings were also analyzed for OCs and PCBs. Reproductive success at the breeding colony was normal in 1996 based on hatching rates of eggs (≥79% in undisturbed areas) and survival of nestlings. Organochlorine pesticide and PCB concentrations in eggs were below known effect levels on reproduction. DDE concentrations in eggs from Anaho Island declined between 1988 and 1996. Eggshell thickness for the Anaho colony was significantly lower (6%) than the pre-OC norm, but the level of thinning was less than that associated with population declines. OCs and PCBs were seldom detected in fish.

Nevada↗

Flooding-induced failure of an invasive Burmese Python nest in southern Florida

It is important to understand the factors affecting the reproductive success of an invasive species to estimate population size and develop management plans. There remains much we do not understand about the reproductive biology of invasive Burmese Pythons in both their native and invasive range. Oviposition site selection is an important factor in determining reproductive success as nesting is a vulnerable period in the life of reptiles. Flooding can be particularly influential for nesting outcomes and success of developing embryos in habitats that experience periods of heavy rainfall or seasonal flooding. It is not clear how seasonal flooding may impact oviposition site selection by females or hatchling survival of Burmese Pythons in Florida. On 10 May 2023, a radio-transmitted female python oviposited in a hollow log and during incubation all eggs were completely submerged for variable amounts of time. All eggs were collected (n = 78) and dissected to confirm fertilization and assess the stage of embryo development. Two eggs were found to be infertile, while the remaining fertile eggs contained embryos that died at various stages of development. The observed failure of this python nest was a direct result of oviposition site selection by the female. The frequency at which females lay eggs in suboptimal locations in southern Florida is currently unknown. This maladaptive behavior would suggest Burmese Pythons have fitness levels below theoretical optima.

Florida↗

Extreme floods, channel change, and riparian forests along ephemeral streams

The geomorphic effectiveness of extreme floods increases with aridity and decreasing watershed size. Therefore, in small dry watersheds extreme floods should control the age structure and spatial distribution of populations of disturbance-dependent riparian trees. We examined the influence of extreme floods on the bottomland morphology and forest of ephemeral streams in a semiarid region. Along six stream reaches on the Colorado Piedmont we examined channel changes by analyzing a rectified sequence of aerial photographs spanning 56 yr, and we investigated the spatial distribution of different-aged patches of forest by aging 189 randomly sampled cottonwood trees. Channel change in these ephemeral sand-bed streams is dominated by widening, which occurs over a span of hours during infrequent floods, and postflood narrowing, which occurs over decades between floods. Narrowing is accelerated where reliable moisture increases the density and growth rate of vegetation on the former bed. Reproduction of cottonwood trees has occurred mostly in former channel bed during periods of channel narrowing beginning after floods in 1935 and 1965 and continuing for as long as two decades. Thus cottonwood establishment is related to low flows at the time scale of a year, but to high flows at the time scale of decades. At sites that have not experienced major floods in the last 80 yr, little channel change has occurred, cottonwood reproduction has been limited, tree density has declined, and succession to grassland is occurring. Because channel change and tree reproduction in this region are driven by infrequent local events, channel width and tree age distributions vary greatly over time and among sites. For the same reason, riparian forests along these ephemeral streams can be as wide as forests along perennial rivers with much higher mean discharge.

Ecological Monographs↗

Are adult nonbreeders prudent parents? The kittiwake model

Understanding evolutionary consequences of intermittent breeding (nonbreeding in individuals that previously bred) requires investigation of the relationships between adult breeding state and two demographic parameters: survival probability and subsequent breeding probability. One major difficulty raised by comparing the demographic features of breeders and nonbreeders as estimated from capture–recapture data is that breeding state is often suspected to influence recapture or resighting probability. We used multistate capture–recapture models to test the hypothesis of equal recapture probabilities for breeding and nonbreeding Kittiwakes and found no evidence of an effect of breeding state on this parameter. The same method was used to test whether reproductive state affects survival probability. Nonbreeding individuals have lower survival rates than breeders. Moreover, nonbreeders have a higher probability of being nonbreeders the following year than do breeders. State-specific survival rates and transition probabilities vary from year to year, but temporal variations of survival and transition probabilities of breeders and nonbreeders are in parallel (on a logit scale). These inferences led us to conclude that nonbreeders tend to be lower quality individuals. The effect of sex was also investigated: males and females do not differ with respect to survival probabilities when reproductive state is taken into account. Similarly, there is no effect of sex on transition probabilities between reproductive states.

Ecology↗

Reduced body size and cub recruitment in polar bears associated with sea ice decline

Rates of reproduction and survival are dependent upon adequate body size and condition of individuals. Declines in size and condition have provided early indicators of population decline in polar bears (Ursus maritimus) near the southern extreme of their range. We tested whether patterns in body size, condition, and cub recruitment of polar bears in the southern Beaufort Sea of Alaska were related to the availability of preferred sea ice habitats and whether these measures and habitat availability exhibited trends over time, between 1982 and 2006. The mean skull size and body length of all polar bears over three years of age declined over time, corresponding with long‐term declines in the spatial and temporal availability of sea ice habitat. Body size of young, growing bears declined over time and was smaller after years when sea ice availability was reduced. Reduced litter mass and numbers of yearlings per female following years with lower availability of optimal sea ice habitat, suggest reduced reproductive output and juvenile survival. These results, based on analysis of a long‐term data set, suggest that declining sea ice is associated with nutritional limitations that reduced body size and reproduction in this population.

Ecological Applications↗

Environmental correlates of temporary emigration for female Weddell seals and consequences for recruitment

In colonial-breeding species, prebreeders often emigrate temporarily from natal reproductive colonies then subsequently return for one or more years before producing young. Variation in attendance–nonattendance patterns can have implications for subsequent recruitment. We used open robust-design multistate models and 28 years of encounter data for prebreeding female Weddell seals ( Leptonychotes weddellii [Lesson]) to evaluate hypotheses about (1) the relationships of temporary emigration (TE) probabilities to environmental and population size covariates and (2) motivations for attendance and consequences of nonattendance for subsequent probability of recruitment to the breeding population. TE probabilities were density dependent (βˆ BPOP = 0.66, = 0.17; estimated effects [β] and standard errors of population size in the previous year) and increased when the fast-ice edge was distant from the breeding colonies (βˆ DIST = 0.75, = 0.04; estimated effects and standard errors of distance to the sea-ice edge in the current year on TE probability in the current year) and were strongly age and state dependent. These results suggest that trade-offs between potential benefits and costs of colony attendance vary annually and might influence motivation to attend colonies. Recruitment probabilities were greatest for seals that consistently attended colonies in two or more years (e.g., = 0.56, SD = 0.17) and lowest for seals that never or inconsistently attended prior to recruitment (e.g., = 0.32, SD = 0.15), where denotes the mean recruitment probability (over all years) for 10-year-old seals for the specified prebreeder state. In colonial-breeding seabirds, repeated colony attendance increases subsequent probability of recruitment to the adult breeding population; our results suggest similar implications for a marine mammal and are consistent with the hypothesis that prebreeders were motivated to attend reproductive colonies to gain reproductive skills or perhaps to optimally synchronize estrus through close association with mature breeding females.

Ecology↗

Further assessment of environmental contaminants in avian prey of the peregrine falcon in big bend National Park, Texas

A small resident population of peregrine falcons (Falco peregrinus anatum) in the Big Bend region of Texas has suffered reproductive failures since 1990. To continue our assessment of the effects of environmental contaminants on the peregrine falcon, we collected representative avian prey species during 2001 at Mariscal Canyon, Big Bend National Park. The avian carcasses were analyzed for inorganic and organochlorine contaminants. Concentrations of Se and Hg were present at high levels (up to 11 and 2.2 ??g/g dry weight, respectively) in some avian prey and could be implicated in reproductive failures of the peregrine falcon in Big Bend National Park. All other inorganic elements were below concentrations known to affect reproduction or to be associated with other deleterious effects in birds. Of all the organochlorines analyzed, only DDE and total PCBs were present above detection limits in all species, although at low concentrations. Our study provides further support to the hypothesis that contaminants in potential avian prey of the peregrine falcon in the Big Bend region are implicated in the productivity failures observed in this species since 1990.

Southwestern Naturalist↗

A nonlethal microsampling technique to monitor the effects of mercury on wild bird eggs

Methylmercury is the predominant chemical form of mercury reported in the eggs of wild birds, and the embryo is the most sensitive life stage to methylmercury toxicity. Protective guidelines have been based mainly on captive-breeding studies with chickens (Gallus gallus), mallards (Anas platyrhynchos), and ring-necked pheasants (Phasianus colchicus) or on field studies where whole eggs were collected and analyzed and the effects of the mercury were measured based on the reproductive success of the remaining eggs. However, both of these methods have limitations. As an alternative, we developed a technique that involves extracting a small sample of albumen from a live egg, sealing the egg, returning the egg to its nest to be naturally incubated by the parents, and then relating the hatching success of this microsampled egg to its mercury concentration. After first developing this technique in the laboratory using chicken and mallard eggs, we selected the laughing gull (Larus atricilla) and black-necked stilt (Himantopus mexicanus) as test subjects in the field. We found that 92% of the microsampled laughing gull eggs met our reproductive endpoint of survival to the beginning of hatching compared to 100% for the paired control eggs within the same nests. Microsampled black-necked stilt eggs exhibited 100% hatching success compared to 93% for the paired control eggs. Our results indicate that microsampling is an effective tool for nonlethally sampling mercury concentrations in eggs and, as such, can be used for monitoring sensitive species, as well as for improving studies that examine the effects of mercury on avian reproduction.

Environmental Toxicology and Chemistry↗