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USGS2005

Watershed-based survey designs

Watershed-based sampling design and assessment tools help serve the multiple goals for water quality monitoring required under the Clean Water Act, including assessment of regional conditions to meet Section 305(b), identification of impaired water bodies or watersheds to meet Section 303(d), and development of empirical relationships between causes or sources of impairment and biological responses. Creation of GIS databases for hydrography, hydrologically corrected digital elevation models, and hydrologic derivatives such as watershed boundaries and upstream–downstream topology of subcatchments would provide a consistent seamless nationwide framework for these designs. The elements of a watershed-based sample framework can be represented either as a continuous infinite set defined by points along a linear stream network, or as a discrete set of watershed polygons. Watershed-based designs can be developed with existing probabilistic survey methods, including the use of unequal probability weighting, stratification, and two-stage frames for sampling. Case studies for monitoring of Atlantic Coastal Plain streams, West Virginia wadeable streams, and coastal Oregon streams illustrate three different approaches for selecting sites for watershed-based survey designs.

Environmental Monitoring and Assessment↗
USGS2011

A geographic information system tool for aquatic resource conservation in the Red and Sabine River Watersheds of the southeast United States

Our goal was to build a geographic information system (GIS) tool to enhance modeling and hypothesis testing relevant to watersheds and fish fauna of the Red and Sabine Rivers in the southeastern United States. Species of concern were identified from wildlife action plans and Web sites. Spatial distributions of fish species and mercury in fillets were delineated using data from states. Public georeferenced data were obtained on land cover, soil type, forest canopy, impervious surfaces, wastewater facilities and 303(d) impaired waters. Overlay maps highlighted patterns across 8-digit hydrologic unit codes (HUCs). Bossier City, Louisiana and Beaumont, Texas areas displayed impervious surfaces over 10% and 303(d) waters per HUC were 20% and 8%, respectively. Because bowfin (Amia calva) (n=299) and bass (Micropterus spp.) (n=1493) occurred in up to 44% of HUCs and fillets contained elemental mercury concentrations across ranges monitored, they were appropriate indicators of bioavailable mercury. Of the total fish number showing >0.5ppm, 81% of records were derived from bowfin and bass, and stepwise multiple linear regressions indicated fish with mercury at these concentrations correlated with environmental variables. Detrended correspondence analysis showed total species occurrence and environmental relationships significant, where 81.6% of the variability in fish occurrence was explained by impervious surface, land cover other than canopy or impervious surface (such as wetlands and agricultural area) and canopy (forest type). Two-way indicator species analysis delineated species co-occurrence in HUCs (14 groups) and similarity of species composition (nine groups). Results identified three HUC groupings as potential targets for managerial interest. Quality control concerns for GIS development included site name data and priority rankings of critical fish species. This tool can be used to support modeling and trend analyses for several purposes, such as those relevant for developing and reporting on water quality standards and critical habitat assessments.

Arkansas, Louisiana, Oklahoma, Texas↗
USGS2011

Valuing ecosystem and economic services across land-use scenarios in the Prairie Pothole Regions of the Dakotas, USA

This study uses biophysical values derived for the Prairie Pothole Region (PPR) of North and South Dakota, in conjunction with value transfer methods, to assess environmental and economic tradeoffs under different policy-relevant land-use scenarios over a 20-year period. The ecosystem service valuation is carried out by comparing the biophysical and economic values of three focal services (i.e. carbon sequestration, reduction in sedimentation, and waterfowl production) across three focal land uses in the region [i.e. native prairie grasslands, lands enrolled in the Conservation Reserve and Wetlands Reserve Programs (CRP/WRP), and cropland]. This study finds that CRP/WRP lands cannot mitigate (hectare for hectare) the loss of native prairie from a social welfare standpoint. Land use scenarios where native prairie loss was minimized, and CRP/WRP lands were increased, provided the most societal benefit. The scenario modeling projected native prairie conversion to cropland over the next 20 years would result in a social welfare loss valued at over $4 billion when considering the study's three ecosystem services, and a net loss of about $3.4 billion when reductions in commodity production are accounted for.

North Dakota;South Dakota↗
USGS1999

International river basins of the world

It is becoming acknowledged that water is likely to be the most pressing environmental concern of the next century. Difficulties in river basin management are only exacerbated when the resource crosses international boundaries. One critical aid in the assessment of international waters has been the Register of International Rivers a compendium which listed 214 international waterways that cover 47% of the earth's continental land surface. The Register, though, was last updated in 1978 by the now defunct United Nations Department of Economic and Social Affairs. The purpose of this paper is to update the Register in order to reflect the quantum changes that have taken place over the last 22 years, both in global geopolitics and in map coverage and technology. By accessing digital elevation models at spatial resolutions of 30 arc seconds, corroborating at a unified global map coverage of at least 1:1 000 000, and superimposing the results over complete coverage of current political boundaries, we are able to provide a new register which lists 261 international rivers, covering 45.3% of the land surface of the earth (excluding Antarctica). This paper lists all international rivers with their watershed areas, the nations which share each watershed,their respective territorial percentages, and notes on changes in or disputes over international boundaries since 1978.

International Journal of Water Resources Developme↗
USGS2011

Quantifying seascape structure: Extending terrestrial spatial pattern metrics to the marine realm

Spatial pattern metrics have routinely been applied to characterize and quantify structural features of terrestrial landscapes and have demonstrated great utility in landscape ecology and conservation planning. The important role of spatial structure in ecology and management is now commonly recognized, and recent advances in marine remote sensing technology have facilitated the application of spatial pattern metrics to the marine environment. However, it is not yet clear whether concepts, metrics, and statistical techniques developed for terrestrial ecosystems are relevant for marine species and seascapes. To address this gap in our knowledge, we reviewed, synthesized, and evaluated the utility and application of spatial pattern metrics in the marine science literature over the past 30 yr (1980 to 2010). In total, 23 studies characterized seascape structure, of which 17 quantified spatial patterns using a 2-dimensional patch-mosaic model and 5 used a continuously varying 3-dimensional surface model. Most seascape studies followed terrestrial-based studies in their search for ecological patterns and applied or modified existing metrics. Only 1 truly unique metric was found (hydrodynamic aperture applied to Pacific atolls). While there are still relatively few studies using spatial pattern metrics in the marine environment, they have suffered from similar misuse as reported for terrestrial studies, such as the lack of a priori considerations or the problem of collinearity between metrics. Spatial pattern metrics offer great potential for ecological research and environmental management in marine systems, and future studies should focus on (1) the dynamic boundary between the land and sea; (2) quantifying 3-dimensional spatial patterns; and (3) assessing and monitoring seascape change.

Marine Ecology Progress Series↗
USGS2018

Patch and landscape responses of bird abundance to fragmentation in agroecosystems of east-central Argentina

Forest fragmentation in agroecosystems is linked to declines of avian species worldwide. Agriculture has greatly reduced native forest cover in east-central Argentina. Assessing the influence of fragmentation on forest bird populations is vital to inform reliable conservation and management strategies for the Espinal region of Argentina. We determined the relationships of vegetation structure within native forest patches, size and shape of these patches (patch scale), composition and spatial configuration (at landscape scale) to relative abundance of 17 forest bird species during austral fall-winter and spring-summer seasons. Birds were sampled from 2007 – 2009 in 45 forest patches within three landscape mosaics (30x30 km) representing a gradient of native forest fragmentation in east-central Argentina. We used an information-theoretic approach and approximated model inference to examine the effect of predictor environmental variables at two spatial scales on patterns of forest bird abundance. Density of trees within forest patches was the main predictor of bird abundance at the patch scale. Amount of forest and spatial configuration were also important. The abundance of several bird species was greater in patches with high density of trees and landscapes characterized by more forest cover and larger patches in close proximity. We found two main avian response patterns to forest fragmentation and patch characteristics. This information contributes reliable knowledge for the design of conservation measures of agricultural landscapes in the Espinal region of Argentina.

Avian Conservation and Ecology↗
USGS2009

Mineral Resource Assessment of Marine Sand Resources in Cape- and Ridge-Associated Marine Sand Deposits in Three Tracts, New York and New Jersey, United States Atlantic Continental Shelf

Demand is growing in the United States and worldwide for information about the geology of offshore continental shelf regions, the character of the seafloor, and sediments comprising the seafloor and subbottom. Interest in locating sand bodies or high quality deposits that have potential as sources for beach nourishment and ecosystem restoration is especially great in some regions of the country. The Atlantic coast, particularly New York and New Jersey, has been the focus of these studies for the past 40 years with widely varying results. This study is the first attempt at applying probability statistics to modeling Holocene-age cape-and ridge-associated sand deposits and thus focuses on distinct sand body morphology. This modeling technique may have application for other continental shelf regions that have similar geologic character and late Quaternary sea-level transgression history. An estimated volume of 3.9 billion m3 of marine sand resources is predicted in the cape-and ridge-associated marine sand deposits in three representative regions or tracts on the continental shelf offshore of New York and New Jersey. These estimates are taken from probabilistic distributions of sand resources and are produced using deposit models and Monte Carlo Simulation (MCS) techniques. The estimated sand resources presented here are for only three tracts as described below and for Holocene age sand resources contained in cape-and ridge-associated marine sand deposit types within this area. Other areas may qualify as tracts for this deposit type and other deposit types and geologic ages (for example, paleo-stream channels, blanket and outwash deposits, ebb-tide shoals, and lower sea level-stand deltas), which are present on the New Jersey and New York continental shelf area but are not delineated and modeled in this initial evaluation. Admittedly, only a portion of these probable sand resources will ultimately be available and suitable for production, dependent largely on geographic, economic, preemptive use, environmental, geologic and political factors. In addition, offshore sand resources should only be considered if the area is seaward of the active zone of significant nearshore sediment transport, about 10 to 12 m in depth, and in sufficiently shallow water so that sand can be extracted within U.S. dredging equipment limits, currently about 40 m in depth. If the material is to be used for beach nourishment, material must be of an appropriate sediment texture and character (grain size, sorting, shape, and color) to match the native beach and have mineralogical properties important to its use. Extraction of sand can disturb or alter the benthic habitat and seafloor ecology, so these factors and other site-specific effects will need to be evaluated for any intended use. These and other factors are not considered in this report but can be expected to reduce the total net volume of sand resources available for production. The purpose of this report is to describe and present results from a probabilistic mineral modeling technique previously applied to onshore mineral resources. This modeling and assessment procedure is being used for the first time to assess and estimate offshore aggregate resources; this study is part of the U.S. Geological Survey (USGS) Marine Aggregates Resources and Processes Project (http://woodshole.er.usgs.gov/project-pages/aggregates/).

Bulletin↗
USGS2025

Multi-species telemetry quantifies current and future efficacy of a remote marine protected area

Large-scale marine protected areas (LSMPAs; > 1000 km 2 ) provide important refuge for large mobile species, but most do not encompass species' ranges. To better understand current and future LSMPA value, we concurrently tracked nine species (seabirds, cetaceans, pelagic fishes, manta rays, reef sharks) at Palmyra Atoll and Kingman Reef (PKMPA) in the U.S. Pacific Islands Heritage Marine National Monument. PKMPA and the U.S. Exclusive Economic Zone encompassed 39% and 54% of species movements ( n = 83; tracking duration range: 0.5–350 days), respectively. Species distribution models indicated 73% of PKMPA contained highly suitable habitat. Under two projected future scenarios (SSP 1–2.6, “Sustainability”; SSP 3–7.0, “Rocky Road”), strong sea surface temperature gradients initially could cause abrupt oceanic change resulting in predicted habitat loss in 2040–2050, followed by an equilibrium response and regained habitat by 2090–2100. Current and future suitable habitats were available adjacent to PKMPA, suggesting that increased MPA size could enhance protection. Our three-tiered approach combining animal tracking with publicly available remote sensing data and future projected environmental scenarios could be used to design, study, and monitor protected areas throughout the world. Holistic approaches that encompass diverse species and habitat use can enhance assessments of protected area designs. Animal telemetry and remote sensing may be helpful for ascertaining the extent to which other MPAs protect large mobile species in the future.

Kingman Reef, Palmyra Atoll, U.S. Pacific Islands ↗
USGS2025

Spatial distribution and relative biomass of bigheaded carps in Lake Balaton, Hungary estimated from an environmental DNA survey

Silver carp ( Hypophthalmichthys nobilis ), bighead carp ( H. molitrix ) and their hybrids, collectively known as bigheaded carps, have been introduced to Lake Balaton, Hungary. The current stock sizes are difficult to assess. We investigated environmental DNA (eDNA) techniques targeted for bigheaded carps, assessed the spatial distribution of eDNA in Lake Balaton, compared eDNA concentrations to environmental variables to assess potential habitat selection based on those variables, and provided an estimate of biomass of bigheaded carps relative to eDNA shedding rates per unit biomass observed in controlled experiments. Water samples were collected from 70 sites in an array across the lake. Biomass estimation was calculated using mean eDNA concentration obtained by quantitative PCR of the samples and previously determined eDNA shedding rates of bigheaded carps under controlled conditions in a laboratory. Concentration of eDNA was highly variable between sites, resulting in wide confidence intervals. Basins did not significantly differ in eDNA concentration, and there were no strong relationships between environmental variables and eDNA concentration, indications that bigheaded carps use the entire lake. The model provided an estimate of 4,830 metric tonnes (2,750–8,030 tonnes) of bigheaded carps in Lake Balaton, or 81.0 kg/ha. The eDNA method produced a value close to previous estimates by traditional means of total biomass of bigheaded carps in the lake, and like traditional methods, there was a broad confidence interval on the estimate of the mean. The results of the present study support the utility of aquatic eDNA analysis, and the need for further comparisons with fisheries methods and supporting data from laboratory studies.

Lake Balaton↗
USGS2004

Simulation of solute transport of tetrachloroethylene in ground water of the glacial-drift aquifer at the Savage Municipal Well Superfund Site, Milford, New Hampshire, 1960-2000

The Savage Municipal Well Superfund site, named after the former municipal water-supply well for the town of Milford, is underlain by a 0.5-square mile plume of volatile organic compounds (VOCs), primarily tetrachloroethylene (PCE). The plume occurs mostly within a highly transmissive sand-and-gravel unit, but also extends to an underlying till and bedrock unit. The plume logistically is divided into two areas termed Operable Unit No. 1 (OU1), which contains the primary source area, and Operable Unit No. 2 (OU2), which is the extended plume area. PCE concentrations in excess of 100,000 parts per billion (ppb) had been detected in the OU1 area in 1995, indicating a likely Dense Non-Aqueous Phase Liquid (DNAPL) source. In the fall of 1998, the New Hampshire Department of Environmental Services (NHDES) and the U.S. Environmental Protection Agency (USEPA) installed a remedial system in OU1. The OU1 remedial system includes a low-permeability barrier that encircles the highest detected concentrations of PCE, and a series of injection and extraction wells. The barrier primarily sits atop bedrock and penetrates the full thickness of the sand and gravel; and in some places, the full thickness of the underlying basal till. The sand and gravel unit and the till comprise the aquifer termed the Milford-Souhegan glacial-drift aquifer (MSGD). Two-dimensional and three-dimensional finite-difference solute-transport models of the unconsolidated sediments (MSGD aquifer) were constructed to help evaluate solute-transport processes, assess the effectiveness of remedial activities in OU1, and to help design remedial strategies in OU2. The solute-transport models simulate PCE concentrations, and model results were compared to observed concentrations of PCE. Simulations were grouped into the following three time periods: an historical calibration of the distribution of PCE from the initial input (circa 1960) of PCE into the subsurface to the 1990s, a pre-remedial calibration from 1995 to 1998, and a remedial (post-barrier wall) calibration from 1998 to 1999. Model results also were checked against observed PCE concentrations from May and June 2000 as a post-audit of model performance. Results of the simulations of the two-dimensional model for the historical calibration indicate that the model-computed length of the plume is affected by the retardation factor (retardation). Values of retardation greater than 3 caused the longitudinal length of the computed plume to be too short compared to the observed plume. A retardation of 2-2.5 produced a reasonable comparison between computed and observed PCE concentrations. Testing of different starting times and rates of mass input of PCE indicated that the plume reaches a quasi steady-state distribution in about 20 years regardless of the rate of mass input or values of the solute-transport parameters (retardation, dispersion, and irreversible reaction) assigned the model. Results of the simulations of the three-dimensional model for the pre-remedial (1995-98) calibration of PCE for the OU2 area identified some spatial biases in computed concentrations that generally were unaffected by changes in retardation. The computed PCE concentrations exceeded observed concentrations along the northern part of the plume in OU2, where PCE increases were observed in a bedrock well. These results indicate that some PCE in this area may be entering the bedrock, which is not simulated in the model. Conversely, computed PCE concentrations were less than observed concentrations along the southern part of the plume in OU2. Because testing of high (above 4) values of retardation did little to reduce residuals, it is concluded that the low computed PCE concentrations along the southern flank are likely the result of an underestimation of the initial PCE mass in this area or an unaccounted source of PCE. Results of the simulations of the three-dimensional model for the remedial calibration period (1998-99) and po

Scientific Investigations Report↗
USGS2017

Imputation approaches for animal movement modeling

The analysis of telemetry data is common in animal ecological studies. While the collection of telemetry data for individual animals has improved dramatically, the methods to properly account for inherent uncertainties (e.g., measurement error, dependence, barriers to movement) have lagged behind. Still, many new statistical approaches have been developed to infer unknown quantities affecting animal movement or predict movement based on telemetry data. Hierarchical statistical models are useful to account for some of the aforementioned uncertainties, as well as provide population-level inference, but they often come with an increased computational burden. For certain types of statistical models, it is straightforward to provide inference if the latent true animal trajectory is known, but challenging otherwise. In these cases, approaches related to multiple imputation have been employed to account for the uncertainty associated with our knowledge of the latent trajectory. Despite the increasing use of imputation approaches for modeling animal movement, the general sensitivity and accuracy of these methods have not been explored in detail. We provide an introduction to animal movement modeling and describe how imputation approaches may be helpful for certain types of models. We also assess the performance of imputation approaches in two simulation studies. Our simulation studies suggests that inference for model parameters directly related to the location of an individual may be more accurate than inference for parameters associated with higher-order processes such as velocity or acceleration. Finally, we apply these methods to analyze a telemetry data set involving northern fur seals ( Callorhinus ursinus ) in the Bering Sea. Supplementary materials accompanying this paper appear online.

Journal of Agricultural, Biological, and Environme↗
USGS1997

Hydraulic modeling for lahar hazards at cascades volcanoes

The National Weather Service flood routing model DAMBRK is able to closely replicate field-documented stages of historic and prehistoric lahars from Mt. Rainier, Washington, and Mt. Hood, Oregon. Modeled time-of-travel of flow waves are generally consistent with documented lahar travel-times from other volcanoes around the world. The model adequately replicates a range of lahars and debris flows, including the 230 million km3 Electron lahar from Mt. Rainier, as well as a 10 m3 debris flow generated in a large outdoor experimental flume. The model is used to simulate a hypothetical lahar with a volume of 50 million m3 down the East Fork Hood River from Mt. Hood, Oregon. Although a flow such as this is thought to be possible in the Hood River valley, no field evidence exists on which to base a hazards assessment. DAMBRK seems likely to be usable in many volcanic settings to estimate discharge, velocity, and inundation areas of lahars when input hydrographs and energy-loss coefficients can be reasonably estimated.

Environmental & Engineering Geoscience↗
USGS2020

Application of airborne LiDAR and GIS in modeling trail erosion along the Appalachian Trail, New Hampshire, USA

Recreational activities can negatively affect protected area landscapes and resources and soil erosion is frequently cited as the most significant long-term impact to recreational trails. Comprehensive modeling of soil loss on trails can identify influential factors that managers can manipulate to design and manage more sustainable trails. Field measurements assessed soil loss as the mean vertical depth along 135 trail transects across the Appalachian Trail sampled along three 5km trail segments in the White Mountains National Forest of New Hampshire. Using LiDAR data to accurately measure terrain characteristics that influence trail erosion can improve predictive models of trail system soil loss. Borrowing from geomorphic and agricultural soil erosion models, this study evaluated a variety of terrain and hydrology characteristics to model trail soil loss at three spatial scales: transect, trail corridor, and watershed. The model for each spatial scale and a combined model are presented. The adjusted R2 explaining variation in soil loss is 0.57 using variables from all spatial scales, a substantial improvement on previous trail erosion models. Environmental and trail design factors such as slope and watershed flow length were found to be significantly correlated to soil loss and have implications for sustainable trail design and management.

New Hampshire↗
USGS2005

Upper Auglaize watershed AGNPS modeling project

The Upper Auglaize Watershed agricultural non-point source modeling project was an interagency effort to use a Geographic Information System (GIS)-based modeling approach for assessing and reducing pollution from agricultural runoff and other non-point sources. This project applied the U.S. Department of Agriculture (USDA), Agricultural Research Service’s AGricultural Non-Point Source (AGNPS) suite of models to the Upper Auglaize River Watershed, a major watershed within the Maumee River Basin. This modeling project was conducted by an interagency team consisting of a partnership between the: (1) USDA, Agricultural Research Service (ARS); (2) USDA, Natural Resources Conservation Service (NRCS); (3) U.S. Army Corps of Engineers (USACE); (4) U.S. Geological Survey (USGS); (5) Ohio State University; (6) University of Toledo (UT); (7) Heidelberg College; (8) Ohio Department of Natural Resources (ODNR), Division of Soil and Water Conservation; (9) Ohio Environmental Protection Agency (OEPA); and (10) Allen, Auglaize, Van Wert, and Putnam Soil and Water Conservation Districts. The partnership was the first step in a process to eventually apply the model in a portioned subset of watersheds for the Maumee Basin, and then to link them to form a comprehensive basin-wide model This work was performed under the authority of Section 516(e) of the Water Resources Development Act (WRDA) of 1996, as amended, for the purpose of assisting State and local watershed managers with their evaluation, prioritization and implementation of alternatives for soil conservation, sediment trapping and non-point source pollution prevention in the Upper Auglaize River watershed. The project team, working in a cooperative effort, used the models to determine sediment sources, contributing locations, and the effect of application of best management practices (BMPs) on rates of sediment delivery to the mouth of the watershed. The results will be used to guide conservation incentive and land treatment programs. The team relied heavily on Geographic Information System (GIS)-based applications to expedite the application of the model. The results of the analysis demonstrated that the application of BMPs would have a positive effect on reducing the loadings of sediment leaving the mouth of the Upper Auglaize Watershed. An application of 17 percent new no-till acres and eight percent new grassland acres, when randomly applied to the watershed, reduced loadings at the mouth to 82 percent of the simulated existing condition loadings. No-till, conversion of cropland to grassland, other uses including grass buffers, and reforestation of parts of the watershed, were all shown by the model to have a measurable effect on reducing sediment loads. Conversion of all of the cropland in the watershed to no-till would reduce the average unit load (tons of sediment per acre) leaving the mouth of the watershed to a level that is 42 percent of the simulated existing condition load. Ephemeral gullies were found to be the primary source of erosion (72 percent), sediment yield (73 percent), and sediment loading (73 percent). Controlling sediment load means controlling gully erosion and possibly trapping sediment yield before it reaches the stream system. Most BMPs (e.g., no-till, conversion of cropland, etc.) that reduce sheet and rill erosion and its sediment yield will also reduce gully erosion and its sediment yield. However, grassed waterways, which have no effect on sheet and rill erosion, are frequently an effective BMP to prevent ephemeral gullies. And, of course, riparian vegetation and sediment traps would reduce the delivery ratios of all types of landscape erosion. New techniques were developed by the team to quantify the ephemeral gully erosion within the model. When calibrated to available stream gage data the model suggests that more (73% in the existing condition simulation) of the sediment load originates from ephemeral gully erosion than from traditional sheet and rill erosion. The model quantified the value of tile drainage in reducing the sediment load from the watershed. Loadings under drained conditions were always less than loadings under undrained conditions for otherwise identical land uses. The average sediment load of all alternatives for drained loadings was 89.2 percent of the load for the corresponding undrained loadings. The model established that while many conservation incentive programs treat tile drainage as a production practice, significant erosion and sediment control benefits are provided by the practice in comparison to cultivation in an undrained state.

Ohio↗
USGS2014

From hybrid swarms to swarms of hybrids

Science has shown that the introgression or hybridization of modern humans ( Homo sapiens ) with Neanderthals up to 40,000 YBP may have led to the swarm of modern humans on earth. However, there is little doubt that modern trade and transportation in support of the humans has continued to introduce additional species, genotypes, and hybrids to every country on the globe. We assessed the utility of species distributions modeling of genotypes to assess the risk of current and future invaders. We evaluated 93 locations of the genus Tamarix for which genetic data were available. Maxent models of habitat suitability showed that the hybrid, T. ramosissima x T. chinensis , was slightly greater than the parent taxa (AUCs > 0.83). General linear models of Africanized honey bees, a hybrid cross of Tanzanian Apis mellifera scutellata and a variety of European honey bee including A. m. ligustica , showed that the Africanized bees (AUC = 0.81) may be displacing European honey bees (AUC > 0.76) over large areas of the southwestern U.S. More important, Maxent modeling of sub-populations (A1 and A26 mitotypes based on mDNA) could be accurately modeled (AUC > 0.9), and they responded differently to environmental drivers. This suggests that rapid evolutionary change may be underway in the Africanized bees, allowing the bees to spread into new areas and extending their total range. Protecting native species and ecosystems may benefit from risk maps of harmful invasive species, hybrids, and genotypes.

Environment and Ecology Research↗
USGS2015

Indicators of climate impacts for forests: Recommendations for the U.S. National Climate Assessment Indicators system

The Third National Climate Assessment (NCA) process for the United States focused in part on developing a system of indicators to communicate key aspects of the physical climate, climate impacts, vulnerabilities, and preparedness to inform decisionmakers and the public. Initially, 13 active teams were formed to recommend indicators in a range of categories, including forest, agriculture, grassland, phenology, mitigation, and physical climate. This publication describes the work of the Forest Indicators Technical Team. We briefly describe the NCA indicator system effort, propose and explain our conceptual model for the forest system, present our methods, and discuss our recommendations. Climate is only one driver of changes in U.S. forests; other drivers include socioeconomic drivers such as population and culture, and other environmental drivers such as nutrients, light, and disturbance. We offer additional details of our work for transparency and to inform an NCA indicator Web portal. We recommend metrics for 11 indicators of climate impacts on forest, spanning the range of important aspects of forest as an ecological type and as a sector. Some indicators can be reported in a Web portal now; others need additional work for reporting in the near future. Indicators such as budburst, which are important to forest but more relevant to other NCA indicator teams, are identified. Potential indicators that need more research are also presented.

Report↗
USGS2012

A novel antibody-based biomarker for chronic algal toxin exposure and sub-acute neurotoxicity

The neurotoxic amino acid, domoic acid (DA), is naturally produced by marine phytoplankton and presents a significant threat to the health of marine mammals, seabirds and humans via transfer of the toxin through the foodweb. In humans, acute exposure causes a neurotoxic illness known as amnesic shellfish poisoning characterized by seizures, memory loss, coma and death. Regular monitoring for high DA levels in edible shellfish tissues has been effective in protecting human consumers from acute DA exposure. However, chronic low-level DA exposure remains a concern, particularly in coastal and tribal communities that subsistence harvest shellfish known to contain low levels of the toxin. Domoic acid exposure via consumption of planktivorous fish also has a profound health impact on California sea lions ( Zalophus californianus ) affecting hundreds of animals yearly. Due to increasing algal toxin exposure threats globally, there is a critical need for reliable diagnostic tests for assessing chronic DA exposure in humans and wildlife. Here we report the discovery of a novel DA-specific antibody response that is a signature of chronic low-level exposure identified initially in a zebrafish exposure model and confirmed in naturally exposed wild sea lions. Additionally, we found that chronic exposure in zebrafish caused increased neurologic sensitivity to DA, revealing that repetitive exposure to DA well below the threshold for acute behavioral toxicity has underlying neurotoxic consequences. The discovery that chronic exposure to low levels of a small, water-soluble single amino acid triggers a detectable antibody response is surprising and has profound implications for the development of diagnostic tests for exposure to other pervasive environmental toxins.

PLoS ONE↗
USGS2009

Planning for an uncertain future - Monitoring, integration, and adaptation

The 6.7 billion human inhabitants of the earth have the ability to drastically alter ecosystems and the populations of species that have taken eons to evolve. By better understanding how our actions affect the environment, we stand a better chance of designing successful strategies to manage ecosystems sustainably. Toward this end, the Third Interagency Conference on Research in the Watersheds (ICRW) was convened in Estes Park, CO, on September 8-11, 2008. The Conference provided a forum to present adaptive management as a practical tool for learning how to manage complex ecosystems more sustainably. Further complexity introduced by spatially variable and continuously changing environmental drivers favors this management approach because of its emphasis on adaptation in response to changing conditions or ineffective actions. For climate change in particular, an adaptive approach can more effectively accommodate the uncertainty in future climate scenarios. Scenarios compiled by the Intergovernmental Panel on Climate Change are built on distinct economic, energy, and societal models. The scenarios predict potential changes in greenhouse gases, temperature, precipitation, and atmospheric aerosols, which would have direct or indirect impacts on the timing, volume, and quality of runoff, vegetation, snowpack, stream temperature, groundwater, thawing permafrost, and icecaps. Through presentations and field trips, researchers and stakeholders described how their findings and issues fit into the adaptive management 'learning by doing' paradigm of Assess > Design > Implement > Monitor > Evaluate > Adjust > Assess.

Scientific Investigations Report↗