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At least 901 records · Page 50Linked to original sources
USGS2016

Environmental variability and population dynamics: Do European and North American ducks play by the same rules?

Density dependence, population regulation, and variability in population size are fundamental population processes, the manifestation and interrelationships of which are affected by environmental variability. However, there are surprisingly few empirical studies that distinguish the effect of environmental variability from the effects of population processes. We took advantage of a unique system, in which populations of the same duck species or close ecological counterparts live in highly variable (north American prairies) and in stable (north European lakes) environments, to distinguish the relative contributions of environmental variability (measured as between-year fluctuations in wetland numbers) and intraspecific interactions (density dependence) in driving population dynamics. We tested whether populations living in stable environments (in northern Europe) were more strongly governed by density dependence than populations living in variable environments (in North America). We also addressed whether relative population dynamical responses to environmental variability versus density corresponded to differences in life history strategies between dabbling (relatively “fast species” and governed by environmental variability) and diving (relatively “slow species” and governed by density) ducks. As expected, the variance component of population fluctuations caused by changes in breeding environments was greater in North America than in Europe. Contrary to expectations, however, populations in more stable environments were not less variable nor clearly more strongly density dependent than populations in highly variable environments. Also, contrary to expectations, populations of diving ducks were neither more stable nor stronger density dependent than populations of dabbling ducks, and the effect of environmental variability on population dynamics was greater in diving than in dabbling ducks. In general, irrespective of continent and species life history, environmental variability contributed more to variation in species abundances than did density. Our findings underscore the need for more studies on populations of the same species in different environments to verify the generality of current explanations about population dynamics and its association with species life history.

Ecology and Evolution↗
USGS2015

Response to "Comment on and Reinterpretation of Gabriel et al. (2014) "Fish Mercury and Surface Water Sulfate Relationships in the Everglades Protection Area""

The purpose of this forum is to respond to a rebuttal submitted by Julian et al., Environ Manag 55:1–5, 2015 where they outlined their overall disagreement with the data preparation, methods, and interpretation of results presented in Gabriel et al. (Environ Manag 53:583–593, 2014 ). Here, we provide background information on the research premise presented in Gabriel et al. (Environ Manag 53:583–593, 2014 ) and provide a defense for this work using five themes. In spite of what Julian et al. perceive as limitations in the sampling methods and analytical tools used for this work, the relationships found between fish total mercury and surface water sulfate concentrations in Gabriel et al. (Environ Manag 53:583–593, 2014 ) are comparable to relationships between pore water methylmercury (MeHg) and pore water sulfate found in past studies indicating that sulfate is important to MeHg production and bioaccumulation in the Everglades. Julian et al. state “…there is no way to justify any ecosystem-wide sulfur strategy as a management approach to reduce mercury risk in the (Everglades) as suggested by Gabriel et al. (Environ Manag 53:583–593, 2014 ), Corrales et al. (Sci Tot Environ 409:2156–2162, 2011 ) and Orem et al. (Rev Environ Sci Technol 41 (S1):249–288, 2011 ).” We disagree, and having stated why sulfate input reduction to the Everglades may be the most effective means of reducing mercury in Everglades fish, it is important that research on sulfur and mercury biogeochemistry continues. If further studies support the relationship between sulfate loading reduction and MeHg reduction, sulfur mass balance studies should commence to (1) better quantify agricultural and connate seawater sulfate inputs and (2) define opportunities to reduce sulfate inputs to the Everglades ecosystem.

Environmental Management↗
USGS2015

Non-native and native organisms moving into high elevation and high latitude ecosystems in an era of climate change: new challenges for ecology and conservation

Cold environments at high elevation and high latitude are often viewed as resistant to biological invasions. However, climate warming, land use change and associated increased connectivity all increase the risk of biological invasions in these environments. Here we present a summary of the key discussions of the workshop ‘Biosecurity in Mountains and Northern Ecosystems: Current Status and Future Challenges’ (Flen, Sweden, 1–3 June 2015). The aims of the workshop were to (1) increase awareness about the growing importance of species expansion—both non-native and native—at high elevation and high latitude with climate change, (2) review existing knowledge about invasion risks in these areas, and (3) encourage more research on how species will move and interact in cold environments, the consequences for biodiversity, and animal and human health and wellbeing. The diversity of potential and actual invaders reported at the workshop and the likely interactions between them create major challenges for managers of cold environments. However, since these cold environments have experienced fewer invasions when compared with many warmer, more populated environments, prevention has a real chance of success, especially if it is coupled with prioritisation schemes for targeting invaders likely to have greatest impact. Communication and co-operation between cold environment regions will facilitate rapid response, and maximise the use of limited research and management resources.

Biological Invasions↗
USGS2016

Spatially explicit feedbacks between seagrass meadow structure, sediment and light: Habitat suitability for seagrass growth

In shallow coastal bays where nutrient loading and riverine inputs are low, turbidity, and the consequent light environment are controlled by resuspension of bed sediments due to wind-waves and tidal currents. High sediment resuspension and low light environments can limit benthic primary productivity; however, both currents and waves are affected by the presence of benthic plants such as seagrass. This feedback between the presence of benthic primary producers such as seagrass and the consequent light environment has been predicted to induce bistable dynamics locally. However, these vegetated areas influence a larger area than they footprint, including a barren adjacent downstream area which exhibits reduced shear stresses. Here we explore through modeling how the patchy structure of seagrass meadows on a landscape may affect sediment resuspension and the consequent light environment due to the presence of this sheltered region. Heterogeneous vegetation covers comprising a mosaic of randomly distributed patches were generated to investigate the effect of patch modified hydrodynamics. Actual cover of vegetation on the landscape was used to facilitate comparisons across landscape realizations. Hourly wave and current shear stresses on the landscape along with suspended sediment concentration and light attenuation characteristics were then calculated and spatially averaged to examine how actual cover and mean water depth affect the bulk sediment and light environment. The results indicate that an effective cover, which incorporates the sheltering area, has important controls on the distributions of shear stress, suspended sediment, light environment, and consequent seagrass habitat suitability. Interestingly, an optimal habitat occurs within a depth range where, if actual cover is reduced past some threshold, the bulk light environment would no longer favor seagrass growth.

Advances in Water Resources↗
USGS2017

Terrestrial subaqueous seafloor dunes: Possible analogs for Venus

Dunes on Venus, first discovered with Magellan Synthetic Aperture Radar (SAR) in the early 1990s, have fueled discussions about the viability of Venusian dunes and aeolian grain transport. Confined to two locations on Venus, the existence of the interpreted dunes provides evidence that there could be transportable material being mobilized into aeolian bedforms at the surface. However, because of the high-pressure high-temperature surface conditions, laboratory analog studies are difficult to conduct and results are difficult to extrapolate to full-sized, aeolian bedforms. Field sites of desert dunes, which are well-studied on Earth and Mars, are not analogous to what is observed on Venus because of the differences in the fluid environments. One potentially underexplored possibility in planetary science for Venus-analog dune fields could be subaqueous, seafloor dune fields on Earth. Known to the marine geology communities since the early 1960s, seafloor dunes are rarely cited in planetary aeolian bedform literature, but could provide a necessary thick-atmosphere extension to the classically studied aeolian dune environment literature for thinner atmospheres. Through discussion of the similarity of the two environments, and examples of dunes and ripples cited in marine literature, we provide evidence that subaqueous seafloor dunes could serve as analogs for dunes on Venus. Furthermore, the evidence presented here demonstrates the usefulness of the marine literature for thick-atmosphere planetary environments and potentially for upcoming habitable worlds and oceanic environment research program opportunities. Such useful cross-disciplinary discussion of dune environments is applicable to many planetary environments (Earth, Mars, Venus, Titan, etc.) and potential future missions.

Aeolian Research↗
USGS2005

Parallel structure among environmental gradients and three trophic levels in a subarctic estuary

We assessed spatial and temporal variability in the physical environment of a subarctic estuary, and examined concurrent patterns of chlorophyll α abundance (fluorescence), and zooplankton and forage fish community structure. Surveys were conducted in lower Cook Inlet, Alaska, during late July and early August from 1997 through 1999. Principle components analysis (PCA) revealed that spatial heterogeneity in the physical oceanographic environment of lower Cook Inlet could be modeled as three marine-estuarine gradients characterized by temperature, salinity, bottom depth, and turbidity. The gradients persisted from 1997 through 1999, and PCA explained 68% to 92% of the variance in physical oceanography for each gradient-year combination. Correlations between chlorophyll α abundance and distribution and the PCA axes were weak. Chlorophyll was reduced by turbidity, and low levels occurred in areas with high levels of suspended sediments. Detrended correspondence analysis (DCA) was used to order the sample sites based on species composition and to order the zooplankton and forage fish taxa based on similarities among sample sites for each gradient-year. Correlations between the structure of the physical environment (PCA axis 1) and zooplankton community structure (DCA axis 1) were strong (r = 0.43-0.86) in all years for the three marine-estuarine gradients, suggesting that zooplankton community composition was structured by the physical environment. The physical environment (PCA) and forage fish community structure (DCA) were weakly correlated in all years along Gradient 2, defined by halocline intensity and surface temperature and salinity, even though these physical variables were more important for defining zooplankton habitats. However, the physical environment (PCA) and forage fish community structure (DCA) were strongly correlated along the primary marine-estuarine gradient (#1) in 1997 (r = 0.87) and 1998 (r = 0.82). The correlation was poor (r = 0.32) in 1999, when fish community structure changed markedly in lower Cook Inlet. Capelin (Mallotus villosus), walleye pollock ( Theragra chalcogramma ), and arrowtooth flounder ( Atheresthes stomias ) were caught farther north than in previous years. Waters were significantly colder and more saline in 1999, a La Nina year, than in other years of the study. Interannual fluctuations in environmental conditions in lower Cook Inlet did not have substantial effects on zooplankton community structure, although abundance of individual taxa varied significantly. The abundance and distribution of chlorophyll α, zooplankton and forage fish were affected much more by spatial variability in physical oceanography than by interannual variability. Our examination of physical-biological linkages in lower Cook Inlet supports the concept of "bottom-up control," i.e., that variability in the physical environment structures higher trophic-level communities by influencing their distribution and abundance across space.

Progress in Oceanography↗
USGS2017

Field study suggests that sex determination in sea lamprey is directly influenced by larval growth rate

Sex determination mechanisms in fishes lie along a genetic-environmental continuum and thereby offer opportunities to understand how physiology and environment interact to determine sex. Mechanisms and ecological consequences of sex determination in fishes are primarily garnered from teleosts, with little investigation into basal fishes. We tagged and released larval sea lamprey ( Petromyzon marinus ) into unproductive lake and productive stream environments. Sex ratios produced from these environments were quantified by recapturing tagged individuals as adults. Sex ratios from unproductive and productive environments were initially similar. However, sex ratios soon diverged, with unproductive environments becoming increasingly male-skewed and productive environments becoming less male-skewed with time. We hypothesize that slower growth in unproductive environments contributed to the sex ratio differences by directly influencing sex determination. To the best of our knowledge, this is the first study suggesting that growth rate in a fish species directly influences sex determination; other studies have suggested that the environmental variables to which sex determination is sensitive (e.g. density, temperature) act as cues for favourable or unfavourable growth conditions. Understanding mechanisms of sex determination in lampreys may provide unique insight into the underlying principles of sex determination in other vertebrates and provide innovative approaches for their management where valued and invasive.

Proceedings of the Royal Society B: Biological Sci↗
USGS2017

Environmental Escherichia coli : Ecology and public health implications - A review

Escherichia coli is classified as a rod-shaped, Gram-negative bacterium in the family Enterobacteriaceae . The bacterium mainly inhabits the lower intestinal tract of warm-blooded animals, including humans, and is often discharged into the environment through feces or wastewater effluent. The presence of E. coli in environmental waters has long been considered as an indicator of recent fecal pollution. However, numerous recent studies have reported that some specific strains of E. coli can survive for long periods of time, and potentially reproduce, in extra-intestinal environments. This indicates that E. coli can be integrated into indigenous microbial communities in the environment. This naturalization phenomenon calls into question the reliability of E. coli as a fecal indicator bacterium (FIB). Recently, many studies reported that E. coli populations in the environment are affected by ambient environmental conditions affecting their long-term survival. Large-scale studies of population genetics provide the diversity and complexity of E. coli strains in various environments, affected by multiple environmental factors. This review examines the current knowledge on the ecology of E. coli strains in various environments in regards to its role as a FIB and as a naturalized member of indigenous microbial communities. Special emphasis is given on the growth of pathogenic E. coli in the environment, and the population genetics of environmental members of the genus Escherichia . The impact of environmental E. coli on water quality and public health is also discussed.

Journal of Applied Microbiology↗
USGS1994

Circum-North Pacific tectonostratigraphic terrane map

The companion tectonostratigraphic terrane and overlap assemblage of map the Circum-North Pacific presents a modern description of the major geologic and tectonic units of the region. The map illustrates both the onshore terranes and overlap volcanic assemblages of the region, and the major offshore geologic features. The map is the first collaborative compilation of the geology of the region at a scale of 1:5,000,000 by geologists of the Russian Far East, Japanese, Alaskan, Canadian, and U.S.A. Pacific Northwest. The map is designed to be a source of geologic information for all scientists interested in the region, and is designed to be used for several purposes, including regional tectonic analyses, mineral resource and metallogenic analyses (Nokleberg and others, 1993, 1994a), petroleum analyses, neotectonic analyses, and analyses of seismic hazards and volcanic hazards. This text contains an introduction, tectonic definitions, acknowledgments, descriptions of postaccretion stratified rock units, descriptions and stratigraphic columns for tectonostratigraphic terranes in onshore areas, and references for the companion map (Sheets 1 to 5). This map is the result of extensive geologic mapping and associated tectonic studies in the Russian Far East, Hokkaido Island of Japan, Alaska, the Canadian Cordillera, and the U.S.A. Pacific Northwest in the last few decades. Geologic mapping suggests that most of this region can be interpreted as a collage of fault-bounded tectonostratigraphic terranes that were accreted onto continental margins around the Circum- . orth Pacific mainly during the Mesozoic and Cenozoic (Fujita and ewberry, 1983; 1987; Parfenov, 1984, 1991; Howell, 1985; Watson and Fujita, 1985; Parfenov and Natal'in, 1984; Jones and others. 1987; Monger and Berg, 1987, Fujita and Cook. 1990; Zonenshain and others. 1990; Natal'in, 1991, 1993; Moore and others, 1992; Silberling and others, 1992; Nokleberg and others. 1992, 1993, 1994a; Parfenov and others. 1993; Plaflcer and Berg, 1994; Tabor, 1994). This map is the result of extensive geologic mapping and associated tectonic studies in the Russian Far East, Hokkaido Island of Japan, Alaska, the Canadian Cordillera, and the U.S.A. Pacific Northwest in the last few decades. Geologic mapping suggests that most of this region can be interpreted as a collage of fault-bounded tectonostratigraphic terranes that were accreted onto continental margins around the Circum- . orth Pacific mainly during the Mesozoic and Cenozoic (Fujita and ewberry, 1983; 1987; Parfenov, 1984, 1991; Howell, 1985; Watson and Fujita, 1985; Parfenov and Natal'in, 1984; Jones and others. 1987; Monger and Berg, 1987, Fujita and Cook. 1990; Zonenshain and others. 1990; Natal'in, 1991, 1993; Moore and others, 1992; Silberling and others, 1992; Nokleberg and others. 1992, 1993, 1994a; Parfenov and others. 1993; Plaflcer and Berg, 1994; Tabor, 1994). On the companion map and in the descriptions bel?w· terranes are interpreted according to inferred tectonic environments. These environments are (I) cratonai; (2) passive continental margin; (3) metamorphosed continental margin; (4) continental-margin arc; (5) island arc; (6) oceanic crust, seamount, and ophiolite; (7) accretionary wedge and subduction zone: (8) turbidite basin; and (9) metamorphic for terranes that are too highly-deformed and metamorphosed to de~ermine the original tectonic environment. For terranes with complex geologic histories, the chosen color indicates the tectonic environment most prevalent during this history of the terrane. The tectonic environments inf~rred for igneous rocks are both temporal and genetic. The temporal environments are preaccretion and postaccretion. The genetic environments are subduction-related, rift-related, and collisional (anatectic)- related. In addition to terranes, the map also depicts postaccretion units that include: (I) Cenozoic and Mesozoic overlap assemblages of sedimentary and volcanic rocks that are deposited across two or more terranes that formed generally after accretion of most terranes in the region; (2) Cenozoic and Mesozoic basinal deposits that occur within a terrane or on the craton; (3) plutonic rocks. The postaccretion igneous units are identified by age-lithologic abbreviations and by name. These overlap assemblages and basinal deposits formed mainly during sedimentation and magmatism that occurred after accretion of terranes to each other or to a continental margin. Overlap assemblages provide minimum ages on the timing of accretion of terranes. Some Cenozoic and Mesozoic overlap assemblages and basinal deposits, as well as fragments of terranes, are extensively offset by movement along postaccretion faults. In addition, in onshore areas, the map depicts major preaccretion plutonic rocks that are limited to individual terranes. and in offshore areas. the map depicts major oceanic plates,-ocean floor magnetic lineations. oceanic spreading ridges, and seamounts. The map consists of five sheets. Sheets I and 2 depict, at a scale of I :5.000.000. the tectonostratigraphic terranes. preaccretion plutonic rocks, and postaccretion Cenozoic and Mesozoic overlap sedimentary, volcanic. and plutonic assemblages, and basinal deposits for the Circum- orth Pacific including the Russian Far East, northern Hokkaido Island of Japan, Alaska. the Canadian Cordillera, part of the U.S.A. Pacific Northwest. and adjacent offshore areas. Sheet 3 provides the list of map units for Sheets I and 2. Sheet 4 is a index map showing generalized onshore terranes and overlap assemblages for onshore parts of the Circum-North Pacific at a scale of I: I 0,000,000. Sheet 4 is a guide to the more complicated onshore features depicted on Sheets I and 2. Sheet 5 is an index map showing the major geographic regions for the Circum-North Pacific. Significant differences exist between the representation of onshore and offshore geology on Sheets I and 2. These are: (I) compared to the onshore part of the map, the offshore part is depicted in a more schematic fashion because of more limited data and because the offshore terranes and early Cenozoic and older overlap assemblages generally are obscured by extensive late Cenozoic sedimentary cover that is not shown unless thicker than two kilometers; (2) marginal contacts of offshore Cenozoic and Cretaceous sedimentary basins do not match contacts of onshore Cenozoic and Cretaceous sedimentary units because offshore basins are limited to those regions with sediment thicknesses greater than two kilometers; (3) stratigraphic columns, included at the end of this explanation. are provided only for onshore terranes because the geology of offshore terranes is generally less well-known; and (4) for simplicity, the major onshore Cenozoic sedimentary basins are generally not defined and described separately because the onshore part of the map is designed to emphasize terranes and overlap volcanic assemblages that are crucial for both for tectonic and metallogenic analyses published elsewhere (Nokleberg and others, 1993, 1994a). Several key geologic sources were used in the compilation of the map. For Alaska. the basic outcrop pattern for the map is from Beikman (1980), Gehrels and Berg (1992, 1994). Barker and others ( 1994). Brew (1994), and Moli-Stalcup and others ( 1994b). The distribution of terranes is from Jones and others (1987) and Monger and Berg (1987), with modification by Grantz and other (1991 ). Worall (199 1 ), okleberg and others (1993, 1994a), the cited references, and the Alaskan co-authors of this report. For the Canadian Cordillera. the basic outcrop pattern is from Monger and Berg ( 1987), Wheeler and other (1988). and Wheeler and McFeeley ( 1991) with modifications by the Canadian authors. For the northern part of the Russian Far East. the basic outcrop pattern is from So unov (1985) with modifications by the Russian authors. For the outhern part of the Russian Far East, the basic outcrop pattern is from Krasny (1991) and Bazhanov and Oleinik ( 1986) with modification by the Russian authors. The Russian Far East part of the map is the first attempt to define and delineate terranes in that region. In their compilation. the Russian authors utilized the methodology of U.S.A. and Canadian geologists. Because this map is the first attempt to display the terranes. Cenozoic and Mesozoic overlap assemblages. basinal deposit , and plutonic belts of the Russian Far East. the Russian author will appreciate constructive sugge tions for improving the map.

Open-File Report↗
USGS2020

Compounds of emerging concern detected in water samples from potable water and wastewater treatment plants and detected in water and bed-sediment samples from sites on the Trinity River, Dallas, Texas, 2009–13

The population in the Dallas-Fort Worth metropolitan area in northern Texas is rapidly growing, resulting in a rapid increase in the demand for potable water and an increase in the discharge of wastewater treatment plant effluent. An assessment of compounds of emerging concern (CECs) in samples collected at potable water and wastewater treatment plants in Dallas and downstream from Dallas in the Trinity River was completed by the U.S. Geological Survey in cooperation with the City of Dallas, Dallas Water Utilities. CECs are synthetic or naturally occurring chemicals that are not commonly monitored in the environment but can enter the environment and cause known or suspected adverse ecological or human health effects. CECs can enter the environment through nonpoint sources (for example, runoff) and point sources (for example, concentrated animal feeding operations and treated-effluent discharge from wastewater treatment plants), which can increase concentrations of CECs especially in highly populated areas. CECs include pharmaceuticals (prescription and nonprescription), steroidal hormones, stanols, sterols, detergents and detergent metabolites (hereinafter referred to as “detergents”), personal-use products, pesticides, polycyclic aromatic hydrocarbons (PAHs), flame retardants, plasticizers, and other organic compounds used in everyday domestic, agricultural, and industrial applications. The release of CECs to the environment went largely unrecognized until relatively recently. Increased loading of certain CECs to the environment, combined with advancements in laboratory analysis methods that resulted in appreciably lower detection levels, brought greater attention to the release of CECs. In addition, synthesis of new chemicals or changes in use and disposal of existing chemicals can create new sources of CECs. Some CECs are endocrine disrupting compounds (EDCs), which can elicit adverse effects on development, behavior, and reproduction of wildlife and can cause dysfunction of human and wildlife endocrine (hormone) systems. Results of studies in the United States and Europe indicate that CECs, their metabolites, and industrial, agricultural, and household wastewater products are present in the aquatic environment, water treatment plants, and septic systems. CECs, especially pharmaceuticals, are of interest because of their persistence, widespread use, and potential to cause adverse effects in humans and nontargeted organisms. There is also concern that some CECs and EDCs resist degradation of water treatment processes at potable water treatment plants (PWTPs) and wastewater treatment plants (WWTPs) and that treated-effluent discharge could contain compounds that negatively affect biota living in receiving waters. Therefore, CECs and EDCs are more likely to be detected in environmental samples collected near areas of high population density where treated effluent from WWTPs can contribute substantially to receiving waters. The U.S. Geological Survey, in cooperation with the City of Dallas, Dallas Water Utilities, evaluated the occurrence and concentrations of selected CECs in samples collected at PWTPs and WWTPs in Dallas and downstream from the Dallas-Fort Worth metropolitan area in the Trinity River, Texas, from August 2009 to December 2013. Water samples were collected at three PWTP sites, two WWTP sites, and five study sites on the Trinity River; all sites where samples were collected were in or downstream from Dallas. These water samples were analyzed for 120 CECs, including human-health pharmaceuticals (prescription and nonprescription), antibiotics, steroidal hormones, stanols, sterols, detergents, personal-use products (flavors and fragrances), pesticides and repellents, industrial wastewater compounds, disinfection compounds, PAHs, flame retardants, and plasticizers. Additionally, bed-sediment samples were collected at each of the five Trinity River sites. The bed-sediment samples were analyzed for 57 CECs. In general, the water treatment processes at PWTPs and WWTPs were effective at reducing detections and concentrations of CECs to undetectable levels or transforming the compounds into degradates that were not analyzed. There were 14 and 73 CECs detected in raw water and in untreated-influent water at PWTPs and WWTPs, respectively. Of these, 11 of the 14 CECs detected in raw-water samples and 44 of the 73 CECs detected in untreated-influent samples were not detected in finished water or in treated-effluent water samples, respectively, indicating that these compounds were removed or degraded to compounds that were not analyzed. Some CECs, however, are resistant to degradation and were detected in untreated and treated water at PWTPs and at WWTPs. The three CECs detected at PWTPs in raw-water and finished-water samples were tris(dichloroisopropyl)phosphate, benzophenone, and methyl salicylate. At WWTPs, 29 CECs were detected, including carbamazepine, sulfamethoxazole, 4-androstene-3,17- dione , 3-beta-coprostanol, acetyl-hexamethyl-tetrahydronaphthalene (AHTN), hexahydro-hexamethyl-cyclopenta-benzopyran (HHCB), 1,4-dichlorobenzene, tribromomethane, benzophenone, and tris(dichloroisopropyl)phosphate, in untreated and treated water, indicating that treatment processes likely did not remove or degrade these compounds. Of the 23 CECs detected in stream-water samples collected at 5 sites on the Trinity River in or near Dallas, 10 CECs (carbamazepine, sulfamethoxazole, caffeine, 3-beta-coprostanol, cholesterol, HHCB, benzophenone, triethyl citrate, tributyl phosphate, and tris(dichloroisopropyl)phosphate) were detected at all 5 sites. The 10 CECs detected in water samples collected at all 5 sites on the Trinity River were also detected in treated-effluent water at WWTPs. Eleven of the 57 targeted CECs were detected in bed-sediment samples collected at study sites on the Trinity River. Of these 11 CECs, only 2 (beta-sitosterol and cholesterol) were detected in bed-sediment samples at all 5 sites on the Trinity River. Nine of these 11 CECs were not detected in any water-column sample, likely because of the strong hydrophobic characteristics of these compounds. Results from water treatment plants indicate that the water treatment process is less effective for removing or degrading compounds that are engineered to be resistant to degradation. These results also indicate the presence of CECs and EDCs at locations upstream from PWTPs in Dallas. Results from Trinity River main-stem sites indicate that some compounds are naturally attenuated during transport, but a few are persistent throughout the study reach. Many CECs and EDCs are hydrophobic and were only detected in bed sediment, indicating multiple pathways through which CECs can persist in the environment. In general, concentrations of CECs in the Dallas-Fort Worth metropolitan area were similar to those found in metropolitan areas nationwide.

Texas↗
USGS2020

Repetitive sampling and control threshold improve 16S rRNA results from produced waters associated with hydraulically fractured shales

Sequencing microbial DNA from deep subsurface environments is complicated by a number of issues ranging from contamination to non-reproducible results. Many samples obtained from these environments - which are of great interest due to the potential to stimulate microbial methane generation - contain low biomass. Therefore, samples from these environments are difficult to study as sequencing results can be easily impacted by contamination. In this case, the low amount of sample biomass may be effectively swamped by the contaminating DNA and generate misleading results. Additionally, performing field work in these environments can be difficult, as researchers generally have limited access to and time on site. Therefore, optimizing a sampling plan to produce the best results while collecting the greatest number of samples over a short period of time is ideal. This study aimed to recommend an adequate sampling plan for field researchers obtaining microbial biomass for 16S rRNA gene sequencing, applicable specifically to oil and gas-producing environments. Forty-nine different samples were collected by filtering specific volumes of produced water from a hydraulically fractured well producing from the Niobrara Shale. Water was collected in two different sampling events 24 hours apart. Four to five samples were collected from 11 specific volumes. These samples along with eight different blanks were submitted for analysis. DNA was extracted from each sample, and quantitative polymerase chain reaction (qPCR) and 16S rRNA Illumina MiSeq gene sequencing were performed to determine relative concentrations of biomass and microbial community composition, respectively. The qPCR results varied across sampled volumes, while no discernible trend correlated contamination to volume of water filtered. This suggests that collecting a larger volume of sample may not result in larger biomass concentrations or better representation of a sampled environment. Researchers could prioritize collecting many low volume samples over few high-volume samples. Our results suggest that there also may be variability in the concentration of microbial communities present in produced waters over short (i.e., hours) time scales, which warrants further investigation. Submission of multiple blanks is also vital to determining how contamination or low biomass effects may influence a sample set collected from an unknown environment.

Montana, Wyoming, Colorado, New Mexico, Texas, Okl↗
USGS2018

Distinguishing brackish lacustrine from brackish marine deposits in the stratigraphic record: A case study from the late Miocene and early Pliocene Bouse Formation, Arizona and California, USA

Brackish marine and brackish continental environments are fundamentally different from a compositional perspective. Brackish water is often defined as having salinity lower than that of standard seawater but higher than that of freshwater, but less regard is given to the origin of the salts involved. The simple dilution of standard seawater by freshwater in a coastal or estuarine setting constitutes a brackish environment, but so do lakes where continental fresh water is impounded and becomes more saline through a variety of solute evolution pathways. The range of potential compositions of brackish lake water is diverse and includes water with “seawater-like” compositions. Isolated brackish lake environments located hundreds of kilometers inland can evolve towards sodium chloride-dominated, low alkalinityenvironments that mimic the composition of brackish seawater environments. These types of lakes can harbor a variety of continentally invasive but typically marine organisms, including but not limited to algae, foraminifers, mollusks, diatoms, and crustaceans . Distinguishing brackish marine from brackish lake environments in the geologic record can be difficult. In this paper, the enigmatic late Miocene and early Pliocene southern Bouse Formation of southern Arizona and California, USA, considered by many to represent a marine transgression along the lower Colorado River corridor, is discussed within a broad framework that incorporates hydrochemical, biogeographical, and species niche concepts. A brackish lake interpretation provides a powerful platform that can comprehensively account for the enigmatic mixed marine and continental fossil assemblage and possible tidal rhythmites that feature prominently in the southern Bouse Formation controversy. A review of the broader regional (paleo)environmental context for the southern Bouse supports a sodium chloride-dominated, low alkalinity, mildly brackish (10-5 ppt) Colorado River-fed lake depositional environment that was populated by an intriguing but predictable array of euryhaline, opportunistic, and continentally invasive marginal marine organisms.

Arizona, California↗
USGS2012

A multi-disciplinary approach to the removal of emerging contaminants in municipal wastewater treatment plans in New York State, 2003-2004

Across the United States, there is a rapidly growing awareness of the occurrence and the toxicological impacts of natural and synthetic trace compounds in the environment. These trace compounds, referred to as emerging contaminants (ECs), are reported to cause a range of negative impacts in the environment, such as adverse effects on biota in receiving streams and interference with the normal functions of the endocrine system, which controls growth and development in living organisms. Wastewater treatment plants (WWTPs) have been identified as a key collection point for ECs in the water cycle and potentially an ideal location at which to treat to remove them, thereby mitigating their release into the environment ( Figure 1 ). This presents wastewater industry professionals with both a significant opportunity and a tremendous challenge: to identify cost effective treatment processes that can remove or reduce these contaminants before they are released into the environment. Although WWTPs have been identified as strategic focal points and potential treatment locations for the removal of ECs from the environment, little is known about the nature, variability, transport and fate of this class of compounds in typical wastewaters and treatment facilities in the United States. Furthermore few studies have been performed to monitor or understand the capability of conventional or innovative wastewater treatment processes to remove or reduce the concentrations of a wide variety of ECs at wastewater facilities. This study was designed to provide baseline information on this topic. While other studies have examined the occurrence of a limited number of representative contaminants in the environment (generally five to 10 compounds), this study is unique in that it provides information on a comprehensive list of ECs (63 ECs in total, Contaminant List in Appendix A, not included here) in the wastewater collection and treatment systems for four diverse communities over a two-year period. (It should be noted that the study is ongoing and additional data are pending but only 18 months of data are presented in this paper). The study was conducted in two phases. Phase 1 was designed to provide information concerning the general character and concentration of ECs commonly detected in wastewaters, the variability over a prolonged period of time, the transport and fate of ECs through typical wastewater treatment plants operating with a range of conventional technologies and the impact of WWTP discharges on receiving streams. It also provided guidance in understanding the capability of distinct wastewater treatment processes or technologies to reduce or remove ECs. The second phase of the study focused on one of the most common wastewater treatment processes operated in the United States, the Activated Sludge process. Using four controlled parallel activated sludge pilots, a more detailed assessment of the impact of Sludge Retention Time (SRT) on the reduction or removal of ECs was performed.

New York↗
USGS2015

Preserved filamentous microbial biosignatures in the Brick Flat gossan, Iron Mountain, California

A variety of actively precipitating mineral environments preserve morphological evidence of microbial biosignatures. One such environment with preserved microbial biosignatures is the oxidized portion of a massive sulfide deposit, or gossan, such as that at Iron Mountain, California. This gossan may serve as a mineralogical analogue to some ancient martian environments due to the presence of oxidized iron and sulfate species, and minerals that only form in acidic aqueous conditions, in both environments. Evaluating the potential biogenicity of cryptic textures in such martian gossans requires an understanding of how microbial textures form biosignatures on Earth. The iron-oxide-dominated composition and morphology of terrestrial, nonbranching filamentous microbial biosignatures may be distinctive of the underlying formation and preservation processes. The Iron Mountain gossan consists primarily of ferric oxide (hematite), hydrous ferric oxide (HFO, predominantly goethite), and jarosite group minerals, categorized into in situ gossan, and remobilized iron deposits. We interpret HFO filaments, found in both gossan types, as HFO-mineralized microbial filaments based in part on (1) the presence of preserved central filament lumina in smooth HFO mineral filaments that are likely molds of microbial filaments, (2) mineral filament formation in actively precipitating iron-oxide environments, (3) high degrees of mineral filament bending consistent with a flexible microbial filament template, and (4) the presence of bare microbial filaments on gossan rocks. Individual HFO filaments are below the resolution of the Mars Curiosity and Mars 2020 rover cameras, but sinuous filaments forming macroscopic matlike textures are resolvable. If present on Mars, available cameras may resolve these features identified as similar to terrestrial HFO filaments and allow subsequent evaluation for their biogenicity by synthesizing geochemical, mineralogical, and morphological analyses. Sinuous biogenic filaments could be preserved on Mars in an iron-rich environment analogous to Iron Mountain, with the Pahrump Hills region and Hematite Ridge in Gale Crater astentative possibilities.

California↗
USGS1985

Near-infrared spectra of West Shasta gossans compared with true and false gossans from Australia and Saudi Arabia

The near-infrared spectra of a suite of outcrop samples of massive sulfide gossans and false gossans representing three different weathering environments were measured and studied with X-ray, scanning electron microscope, and energy dispersive X-ray. Gossans that formed in a humid tropical environment are represented by samples from the Mt. Isa area, Queensland, Australia, and gossans that formed in an arid environment are represented by samples from several locations in Saudi Arabia. The gossans of the West Shasta massive sulfide district in California represent a weathering environment intermediate between these two extremes.On the basis of these spectral measurements, true gossans after massive sulfide deposits have spectra in the 800 to 2,500 nanometer (nm) region that are distinctly different from the spectra of false gossans. In the humid tropical environment, highly leached, newly formed kaolin minerals in the gossan cause spectral differences at about 1,400 to 2,200 nm. In the arid environment, true gossans preserve talc and minor mica from the massive sulfide deposit; these minerals are not observed in false gossans. These minerals result in spectral differences in the 2,200- to 2,300-nm region. In addition, true gossans generally have goethite spectral bands at about 900 nm as opposed to hematite spectral bands at about 850 nm for the false gossans.False gossans are not known in the West Shasta district; however, the gossan at the largest deposit, Iron Mountain, is a true gossan that has the distinctive spectral features of goethite at about 900 nm and diaspore in the 1,400- to 2,500-nm region. The other gossans also have the spectral features of goethite, but they contain a less leached mixture of kaolinite plus illite and have distinctive spectral features in the 1,400- to 2,500-nm region. These spectral differences define two groups of West Shasta gossans--inner gossans in large deposits and outer gossans at the margins of large deposits and in lesser massive sulfide deposits.

Economic Geology↗
USGS1998

The ichnologic record of the continental invertebrate invasion; evolutionary trends in environmental expansion, ecospace utilization, and behavioral complexity

The combined study of continental trace fossils and associated sedimentary facies provides valuable evidence of colonization trends and events throughout the Phanerozoic. Colonization of continental environments was linked to the exploitation of empty or under-utilized ecospace. Although the nonmarine trace fossil record probably begins during the Late Ordovician, significant invasion of nonmarine biotopes began close to the Silurian-Devonian transition with the establishment of a mobile arthropod epifauna (Diplichnites ichnoguild) in coastal marine to alluvial plain settings. Additionally, the presence of vertical burrows in Devonian high-energy fluvial deposits reflects the establishment of a stationary, deep suspension-feeding infauna of the Skolithos ichnoguild. The earliest evidence of plant-arthropod interaction occurred close to the Silurian-Devonian boundary, but widespread and varied feeding patterns are known from the Carboniferous. During the Carboniferous, permanent subaqueous lacustrine settings were colonized by a diverse, mobile detritus-feeding epifauna of the Mermia ichnoguild, which reflects a significant palaeoenvironmental expansion of trace fossils. Paleozoic ichnologic evidence supports direct routes to the land from marginal marine environments, and migration to lakes from land settings. All nonmarine sedimentary environments were colonized by the Carboniferous, and subsequent patterns indicate an increase in ecospace utilization within already colonized depositional settings. During the Permian, back-filled traces of the Scoyenia ichnoguild record the establishment of a mobile, intermediate-depth, deposit-feeding in-fauna in alluvial and transitional alluvial-lacustrine sediment. Diversification of land plants and the establishment of ecologically diverse plant communities through time provided new niches to be exploited by arthropods. Nevertheless, most ot the evolutionary feeding innovations took place relatively early, during the Late Palaeozoic or early Mesozoic. A stationary deep unfauna, the Camborygma ichnoguild, was developed in Triassic transitional alluvial-lacustrinbe deposits. Terrestrial environments hosted the rise of complex social behavioral patterns, as suggested by the probable presence of hymenopteran and isopteran nests in Triassic paleosols. An increase in diversity of trace fossils is detected in Triassic-Jurassic eolian deposits, where the ichnofauna displays more varied behavioral patterns than their Paleozoic counterparts. Also, a mobile, intermediate-depth, deposit-feeding infauna, the Vagorichnus ichnoguild, was established in deep lake environments during the Jurassic. In contrast to Paleozoic permanent subaqueous assemblages typified by surface trails, Jurassic ichnocoenoses are dominated by infaunal burrows. High density of infaunal deposit-feeding traces of the Planolites ichnoguild caused major disruption of lacustrine sedimentary fabrics during the Cretaceous. Most insect mouthpart classes, functional feeding groups, and dietary guilds were established by the end of the Cretaceous. Diversification of modern insects is recorded by the abundance and complexity of structures produced by wasps, bees, dung-beetles, and termites in Cretaceous-Tertiary paleosols. The increase in bioturbation migrated from fluvial and lake-margin settings to permanent subaqueous lacustrine environments through time.

Palaios↗
USGS2008

Geologic controls on the growth of petroleum reserves

The geologic characteristics of selected siliciclastic (largely sandstone) and carbonate (limestone and dolomite) reservoirs in North America (largely the continental United States) were investigated to improve our understanding of the role of geology in the growth of petroleum reserves. Reservoirs studied were deposited in (1) eolian environments (Jurassic Norphlet Formation of the Gulf Coast and Pennsylvanian-Permian Minnelusa Formation of the Powder River Basin), (2) interconnected fluvial, deltaic, and shallow marine environments (Oligocene Frio Formation of the Gulf Coast and the Pennsylvanian Morrow Formation of the Anadarko and Denver Basins), (3) deeper marine environments (Mississippian Barnett Shale of the Fort Worth Basin and Devonian-Mississippian Bakken Formation of the Williston Basin), (4) marine carbonate environments (Ordovician Ellenburger Group of the Permian Basin and Jurassic Smackover Formation of the Gulf of Mexico Basin), (5) a submarine fan environment (Permian Spraberry Formation of the Midland Basin), and (6) a fluvial environment (Paleocene-Eocene Wasatch Formation of the Uinta-Piceance Basin). The connection between an oil reservoir's production history and geology was also evaluated by studying production histories of wells in disparate reservoir categories and wells in a single formation containing two reservoir categories. This effort was undertaken to determine, in general, if different reservoir production heterogeneities could be quantified on the basis of gross geologic differences. It appears that reserve growth in existing fields is most predictable for those in which reservoir heterogeneity is low and thus production differs little between wells, probably owing to relatively homogeneous fluid flow. In fields in which reservoirs are highly heterogeneous, prediction of future growth from infill drilling is notably more difficult. In any case, success at linking heterogeneity to reserve growth depends on factors in addition to geology, such as engineering and technological advances and political or cultural or economic influences.

Bulletin↗
USGS2003

Chapter C: Hydrothermal Enrichment of Gallium in Zones of Advanced Argillic Alteration-Examples from the Paradise Peak and McDermitt Ore Deposits, Nevada

Gallium is produced as a byproduct from bauxite and zinc sulfide ores and rarely from primary Ga ores. High Ga contents (>60 ppm) can occur in zones of advanced argillic alteration consisting of alunite+kaolinite+quartz associated with quartz-alunite (high sulfidation Au-Ag) deposits. In a magmatic-hydrothermal environment, the zones of advanced argillic alteration associated with quartz-alunite (high sulfidation) Au-Ag deposits have the highest Ga contents (max 120 ppm). In these Au deposits, Ga is enriched in the zone of alunite+kaolinite alteration and depleted in the zone of quartz-rich alteration within acid-leached rocks. Peripheral zones of argillic alteration have Ga contents and Al/Ga ratios similar to those in unaltered volcanic rocks. The zones of advanced argillic alteration that formed in a steam-heated environment in association with hot-spring-type Hg-Au deposits are not Ga enriched, and residual silicified zones have very low Ga contents. The McDermitt Hg and Paradise Peak Au-Hg deposits, Nev., have zones of advanced argillic alteration that are Ga enriched. At the Paradise Peak Au-Hg deposits, Ga is enriched in the zone of alunite+jarosite alteration that formed in a magmatic-hydrothermal environment. Ga is depleted in the zone of opal+alunite alteration formed in a steam-heated environment, in residual silicified zones formed in a magmatic-hydrothermal environment, and in zones of supergene jarosite alteration. At the McDermitt Hg deposit, Ga is enriched in the zone of alunite+kaolinite alteration below the zone of adularia-quartz alteration that coincides with the Hg ore body. The spatial relation of Ga enrichment to alunite-kaolinite alteration suggests that formation in a magmatic-hydrothermal environment. X-ray-absorption spectra of Ga-enriched samples from the McDermitt Hg deposit are similar to that of gallium sulfate and support the association of Ga enrichment with alunite alteration.

Bulletin↗