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USGS2001

Wetland restoration in the Prairie Pothole Region of North America: A literature review

The landscape of the prairie pothole region (PPR), a grassland biome of the northern U.S. Great Plains and parts of Canada, has been greatly altered by land use since the 1800's. Conversion of grassland to cropland and drainage of wetlands has resulted in wetland losses of up to 90% in some areas. Besides the area providing critical habitat to various wildlife, breeding waterfowl, and migratory birds, its seasonal wetlands support diverse plant and invertebrate communities, play a role in flood attenuation, act as traps for nutrients. store and recharge groundwater. and are valued recreational lands. Most of the restoration of prairie potholes has only occurred since the 1980's, with few follow-up studies performed and little postrestoration monitoring of these restorations. Monitoring and research of wetland restoration in the PPR is less common relative to the number of postrestoration studies done on other wetland types in the United States. This report is a synthesis of current knowledge of restored prairie pothole wetlands and makes suggestions for future wetland restoration-related research. In order to determine the benefits of restored wetlands, it is important to better understand how closely restored wetlands in the PPR resemble their natural analogues in terms of functions and values. The report categorizes PPR literature into five general sections: wildlife, vegetation, invertebrates, fish, and physical and chemical characteristics of restored wetlands. Each of these five sections has a summary of research and is divided into two parts: an overview of research and findings and regional case studies. Most PPR studies have focused on bird and plant communities, whereas research done on the functions of restored wetlands and studies concerning less visible fauna and physical and chemical characteristics are scarce. In addition, there is a scarcity of research in the western and northern portions or the PPR; most studio to date have been conducted in Iowa. Minnesota, or South Dakota. Key Words: wetland restoration, prairie pothole region, PPR, literature review, wetland functions and values. postrestoration studies

Biological Science Report↗

USGS2025

Analysis of trends in terrestrial vegetation at Mediterranean Coast Network Parks: Channel Islands National Park

The five islands comprising Channel Islands National Park (CHIS) experience natural gradients in temperature and moisture driven by ocean currents. Additionally, the islands were used as ranchlands and military land before becoming a national park, resulting in widespread erosion and vegetation change. As a result, CHIS spans gradients in climate as well as ranching duration and time since animal removal. Vegetation monitoring was initiated in 1984 on three islands (Anacapa, Santa Barbara, San Miguel), in 1990 on Santa Rosa Island, and in 1998 on Santa Cruz Island, with the goal of documenting the long-term response of island vegetation to ranch animal removal and climate fluctuations. Since that time, monitoring has documented the range of natural fluctuation in island environments over decades and provided insights into vegetation change in ecosystems unencumbered by ongoing development. Long-term vegetation monitoring at CHIS is therefore a rare example of an ecosystem experiment that demonstrates the results of management actions and serves as a baseline for land managers and scientists worldwide. Terrestrial vegetation data collected between 1984 and 2018 were modeled to estimate trends over time and to characterize relationships with covariates related to site characteristics, nonnative mammal removal programs, and water balance metrics. Data were analyzed for trends in vegetation cover, woody plant density, and plant community diversity grouped by life form and nativity across all islands and within individual islands, as well as for several individual species that dominate plant communities or present challenges to native plant recovery. In all, a total of 162 trend and covariate models were tested in this study, the details of which are provided in this report. Briefly, results reflect a decline in nonnative annual disturbance-thriving species with the reduction in animal grazing and trampling. Increasing trends were observed in native shrub density and native shrub recruitment density, as well as native shrub cover across all islands averaged together and on Santa Cruz Island. However, opposite trends were seen on the smaller islands of Santa Barbara and Anacapa, where increasing seabird activity may be damaging vegetation. Further results indicate the importance of soil moisture, relative humidity, fog, precipitation, site exposure, and solar radiation for vegetation patterns and trends. In many instances, there are apparent interacting effects of environmental variables with trends related to nonnative mammal removal and site location. Vegetation patterns in space and time emerge in the dataset as nuanced responses to interacting drivers.

Calfornia↗

USGS2003

A national survey of Conservation Reserve Program (CRP) participants on environmental effects, wildlife issues, and vegetation management on program lands

A national survey of Conservation Reserve Program (CRP) contractees was completed to obtain information about Abstract environmental and social effects of the program on participants, farms, and communities. Of interest were observations concerning wildlife, attitudes about long-term management of program lands, and effectiveness of U.S. Department of Agriculture (USDA) assistance in relation to these issues. Surveys were delivered to 2,189 CRP participants with a resultant response rate of 64.5%. Retired farmers represented the largest category of respondents (52%). Enhanced control of soil erosion was the leading benefit of the CRP reported. Over 73% of respondents observed increased numbers of wildlife associated with lands enrolled in the program. The majority of respondents reported CRP benefits, including increased quality of surface and ground waters, improved air quality, control of drifting snow, and elevated opportunities to hunt or simply observe wildlife as part of daily activities. Income stability, improved scenic quality of farms and landscapes, and potential increases in property values and future incomes also were seen as program benefits. Negative aspects, reported by a smaller number of respondents, included seeing the CRP as a source of weeds, fire hazard, and attracting unwanted requests for trespass. Over 75% of respondents believed CRP benefits to wildlife were important. A majority of respondents (82%) believed the amount of assistance furnished by USDA related to planning and maintaining wildlife habitat associated with CRP lands was appropriate. Nearly 51% of respondents would accept incorporation of periodic management of vegetation into long-term management of CRP lands to maintain quality of wildlife habitats. Provision of funds to address additional costs and changes in CRP regulations would be required to maximize long-term management of program lands. Additional, on-ground assistance related to management of CRP, and other agricultural lands, to maintain wildlife habitats was commonly identified as a need by survey respondents.

Biological Science Report↗

USGS2009

A Chronosequence Feasibility Assessment of Emergency Fire Rehabilitation Records within the Intermountain Western United States - Final Report to the Joint Fire Science Program - Project 08-S-08

Department of the Interior (DOI) bureaus have invested heavily (for example, the U.S. Bureau of Land Management (BLM) spent more than $60 million in fiscal year 2007) in seeding vegetation for emergency stabilization and burned area rehabilitation of non-forested arid lands over the past 10 years. The primary objectives of these seedings commonly are to (1) reduce the post-fire dominance of non-native annual grasses, such as cheatgrass (Bromus tectorum) and red brome (Bromus rubens); (2) minimize the probability of recurrent fire; and (3) ultimately produce desirable vegetation characteristics (for example, ability to recover following disturbance [resilience], resistance to invasive species, and a capacity to support a diverse flora and fauna). Although these projects historically have been monitored to varying extents, land managers currently lack scientific evidence to verify whether seeding arid and semiarid lands achieves desired objectives. Given the amount of resources dedicated to post-fire seeding projects, a synthesis of information determining the factors that result in successful treatments is critically needed. Although results of recently established experiments and monitoring projects eventually will provide useful insights for the future direction of emergency stabilization and burned area rehabilitation programs, a chronosequence approach evaluating emergency stabilization and burned area rehabilitation treatments (both referenced hereafter as ESR treatments) over the past 30 years could provide a comprehensive assessment of treatment success across a range of regional environmental gradients. By randomly selecting a statistically robust sample from the population of historic ESR treatments in the Intermountain West, this chronosequence approach would have inference for most ecological sites in this region. The goal of this feasibility study was to compile and examine historic ESR records from BLM field offices across the Intermountain West to determine whether sufficient documentation existed for a future field-based chronosequence project. We collected ESR records and data at nine BLM field offices in four States (Oregon, Idaho, Nevada, and Utah) and examined the utility of these data for the development of a chronosequence study of post-fire seeding treatments from multiple sites and different ages (since seeding) throughout the Intermountain West. We collected records from 730 post-fire seeding projects with 1,238 individual seeding treatments. Records from each project ranged from minimal reporting of the project's occurrence to detailed documentation of planning, implementation, and monitoring. Of these 1,238 projects, we identified 468 (38 percent) that could potentially be used to implement a field-based chronosequence study. There were 206 ground-seeding treatments and 262 aerial-seeding treatments within this initial population, not including hand plantings. We also located a considerable number of additional records from other potential field offices that would be available for the chronosequence study but have yet to be compiled for this feasibility report. There are a number of potential challenges involved in going forward with a field-based chronosequence study derived from data collected at these nine BLM offices. One challenge is that not all seed mixtures in ESR project files have on-the-ground confirmation about what was sown or rates of application. Most projects, particularly records before 2000, just list the planned or purchased seed mixtures. Although this could potentially bias assessments of factors influencing establishment rates of individual species for treatments conducted before 2000, a chronosequence study would not be intended to assess success solely at the species-level. Treatment success would be evaluated based on the establishment of healthy vegetation communities, such as the abundance and density of perennial species, regardless of their lifeforms (grasses, fo

Open-File Report↗

USGS2026

Environmental DNA pilot monitoring program for invasive species and biodiversity assessments on Santa Cruz Island: Interim report, September 2025

The U.S. Geological Survey (USGS) and Southern California Coastal Water Research Project supported Channel Islands National Park, The Nature Conservancy’s (TNC) Santa Cruz Island Preserve, and University of California San Diego (UCSD) researchers in using environmental DNA sampling to monitor for invasive Argentine ant ( Linepithema humile ) and to describe spatial biodiversity patterns in a freshwater stream on Santa Cruz Island that is colloquially known as Cañada del Puerto Creek (hydrologic unit code 12 number 180600140201). An eDNA autosampler was deployed May 27–June 02, 2025, which filtered and preserved four 2-L water samples every 12 hours (n = 48 samples). These samples were extracted by USGS and shipped to UCSD for targeted eDNA analyses of Argentine ant. Environmental DNA sampling kits were used to filter and preserve water samples at four sites along the creek spanning ~ 5 km of stream distance. Six 1-L samples were collected at each site May 27–28 and samples were analyzed for eDNA metabarcoding using a comprehensive panel, which encompasses species across the tree of life. In these samples, eDNA from 2,134 unique taxa spanning 30 taxonomic groups (e.g., amoebas, insects, plants) were found. These sampling efforts demonstrated how eDNA autonomous and manual sampling approaches can be applied by National Park Service, TNC, and partners at scale to provide otherwise difficult and expensive to acquire information about biological threats and biodiversity.

California↗

USGS1999

Physical setting: Chapter 1 in Initial biotic survey of Lisbon Bottom, Big Muddy National Fish and Wildlife Refuge

Lisbon Bottom consists of approximately 875 ha of river bottom along the Missouri River in Howard County, Missouri, from approximately river mile (RM) 213 to RM 219. As used in this report, the Lisbon Bottom area also includes the main channel of the Missouri River adjacent to the Lisbon Bottom and portions of the adjacent flood plain in Saline County, Missouri. Before regulation and structuring of the Missouri River, riverine areas like Lisbon Bottom were shifting mosaics of dynamic habitat patches that were created and maintained by hydrologic and geomorphic processes. Flow regulation, navigation structures, and bank-stabilization projects isolated Lisbon Bottom from the river by decreasing the magnitude and frequency with which hydrologic and geomorphic processes could alter habitat characteristics. The flood of 1993 breached agricultural levees around Lisbon Bottom, thereby reestablishing a connection to the Missouri River. Although still affected by flow regulation and the requirement to maintain navigation in the main channel, Lisbon Bottom presents the opportunity to study ecosystem processes and dynamic geomorphology in a setting that more closely mimics the natural riverine system than any other site on the navigable Lower Missouri River. The purpose of this chapter is to describe the physical setting and processes that structure the riverine ecosystem of Lisbon Bottom and similar areas of the Lower Missouri River. The description compiles available information on temporal and spatial changes at the site, including the history of channel changes and hydrology.

Missouri↗

USGS2025

A review of the effects of climate change on visitor use in US public lands and waters

Climate change is affecting recreational visitor use in U.S. public lands and waters, causing changes to visitation levels, timing of trips, activity participation, and visitor safety. This report reviews the literature on how climate change is influencing visitor use in the United States and how visitor use may be affected in the future. Our goal is to provide the current state of the literature for managers of public lands and waters and provide foundational information for the development of a climate change vulnerability assessment methodology for visitor use within the National Park Service (that may be applicable to other federal lands and waters). Specifically, we investigate how seven different climate change factors may affect visitor use on public lands and waters. These factors consist of increasing temperatures; flooding, drought, and increased variability of precipitation; decreasing snowpack and earlier spring runoff; wildfires, smoke, and air quality; coastal hazards: hurricanes and sea level rise; harmful algal blooms (HABs); and zoonotic and vector-borne disease. The current research indicates that these factors are already affecting visitors to public lands and waters and continued effects in the future are likely as the climate warms. Additionally, we summarize existing research on how visitors to U.S. public lands and waters are adapting to climate change. Throughout the review, we note where there are substantial gaps in the literature and more research would help managers respond to the effects of climate change on visitor use.

Science Report↗

USGS2025

Pacific island landbird monitoring report, Kalaupapa National Historical Park, 2021

In 2021, landbird surveys were conducted at Kalaupapa National Historical Park on the island of Molokaʻi to assess changes in species composition, distribution, and population densities since 2005. Point-transect distance sampling surveys were conducted on six transects at 50 landbird monitoring stations within an 1,834-hectare area. A total of nine landbird species were detected, with the ʻApapane ( Himatione sanguinea ) the only endemic Hawaiian species detected. Sufficient detections of six species allowed for population density and abundance estimates, which were compared to 2005 estimates using a two-sample z-test. The abundance of ʻApapane declined by 57% to 2,476 ± 729 (SE) birds in 2021 compared to 2005. Population densities of the House Finch ( Haemorhous mexicanus ), Japanese Bush Warbler ( Horornis diphone ), Warbling White-eye ( Zosterops japonicus ), and White-rumped Shama ( Copsychus malabaricus ) were also lower in 2021 than in 2005, but comparisons were inconclusive. Since 2005, the Red-billed Leiothrix ( Leiothrix lutea ) irrupted within the survey area to an estimated abundance of 11,088 ± 1,208 birds. The Warbling White-eye was the most abundant species, with an estimated 101,724 ± 11,692 birds. Surveyors failed to detect the Hawaiʻi ʻAmakihi ( Chlorodrepanis virens ), which has become increasingly rare on Molokaʻi. The federally threatened ʻIʻiwi ( Drepanis coccinea ) was last seen on Molokaʻi in 2010, further raising concerns about its potential extirpation. The Olomaʻo ( Myadestes lanaiensis ), an endemic thrush, has not been detected since 1980 and is likely extinct. These findings show the ongoing shift toward non-native bird communities and highlight the challenges of conserving native forest birds amidst widespread avian malaria transmission, introduced predators, and extensive habitat degradation.

Hawaii↗

USGS2024

Structured science syntheses to inform decision making on Federal public lands

The U.S. Geological Survey, Bureau of Land Management, and U.S. Fish and Wildlife Service partnered to develop a new type of science product: the structured science synthesis. Structured science syntheses are peer-reviewed reports that synthesize science information about a priority resource management issue on public lands. Structured science syntheses are developed explicitly to facilitate the application of science to decision making. Key characteristics of structured science syntheses include that they are coproduced with resource managers, developed using clear, repeatable methods and designed for ease of use. The syntheses include different types of science information needed for analyses completed under the National Environmental Policy Act.

Fact Sheet↗

USGS2019

Impacts of the 2015 eruption of Calbuco volcano on Chilean infrastructure, utilities, agriculture, and health

This report presents data and summarises the findings of a reconnaissance trip investigating the impacts of the April 2015 eruption of Calbuco volcano, Chile, undertaken in November-December 2016. This study is mostly focused on the Los Lagos region, focusing on impacts occurring within ~30 km of the volcano, which includes the tourism town of Puerto Varas and port city of Puerto Montt. Eruption impacts and response strategies may be similar for moderate size eruptions from other stratovolcanoes in temperate regions. As such, this study provides useful information for development of contingency plans at active volcanoes around the world. The 2015 eruption of Calbuco volcano began at 18:04 (local time) on 22 April 2015 and consisted of three eruptive phases. The first lasted for 1.5 hours and generated a 15-km eruption column and plume that was directed towards the northeast. Pyroclastic density currents (PDCs) were generated locally and distributed radially, affecting many of the major rivers. A second phase began at 01:00 (local time) on 23 April 2015, lasted six hours and generated a 17-km high eruption column and plume that was dispersed towards the north-northeast, and the most voluminous pyroclastic density currents of the sequence. A third eruptive phase occurred on 30 April 12:10 (local time) resulting in a 5-km column and plume dispersed towards the east.

Calbuco volcano↗

USGS2024

Abundance and distribution of white-tailed deer on First State National Historical Park and surrounding lands

We estimated both abundance and distribution of white-tailed deer ( Odocoileus virginianus ) on the Brandywine Valley unit of First State National Historical Park (FRST) and the Brandywine Creek State Park (BCSP) during 2020 and 2021 with two widely used field methods — a road-based count and a network of camera traps. We conducted 24 road-based counts, covering 260 km of roadway, and deployed up to 16 camera traps, processing over 82,000 images representing over 5,000 independent observations. In both years, we identified bucks based on their body and antler characteristics, tracking their movements between baited camera trap locations. We tested seven estimators commonly reported in the literature, comparing the relative merits for managers of small, protected natural areas like FRST. Deer densities estimated from conventional road-based distance sampling were approximately 10 deer/km 2 lower than densities estimated from camera-trapping surveys. We attribute the bias in roadbased distance sampling to the difficulty of recording the precise effort expended to obtain the counts. Modifying the distance sampling method addressed many of the issues associated with the conventional approach. Despite little substantive differences in land cover types between the two methods, a clear spatial segregation of male and female deer at camera trap locations could bias roadbased counts if the sexes are not encountered in proportion to their abundances. There was a distinct gradient in deer distribution across the study area, with higher proportions of deer recorded in camera traps at FRST than BCSP, which harvests 20–60 deer annually during a regulated, hunting season. The most reliable (i.e., low bias, acceptable precision) methods, Spatial Capture Recapture (SCR) and Density Surface Modeling (DSM), produced deer densities of approximately 50 deer/km 2 in each year — a number which is consistent with previous estimates for New Castle County, Delaware, and our experience in similar, unhunted natural areas. Across both FRST and BCSP, these densities translated into area-wide (~1000 ha) population sizes between 650–1000 deer, with about one-half to two-thirds comprising the FRST population. Density surface modeling of mapped locations of deer detected during surveys, combined with camera-trapping and a time-to-event data analysis might be the only practical means of reliably assessing white-tailed deer abundance in small (<2000 ha), protected natural areas like FRST. Most other approaches are either too time-consuming, require identification and tracking of individual deer, the use of bait, or require intervention by a subject-area expert.

Delaware, Pennsylvania↗

USGS2001

Evaluation of Metal Toxicity in Streams Affected by Abandoned Mine Lands, Upper Animas River Watershed, Colorado

Acid drainage from abandoned mines and from naturally-acidic rocks and soil in the upper Animas River watershed of Colorado generates elevated concentrations of acidity and dissolved metals in stream waters and deposition of metal-contaminated particulates in streambed sediments, resulting in both toxicity and habitat degradation for stream biota. High concentrations of iron (Fe), aluminum (Al), zinc (Zn), copper (Cu), cadmium (Cd), and lead (Pb) occur in acid streams draining headwaters of the upper Animas River watershed, and high concentrations of some metals, especially Zn, persist in circumneutral reaches of the Animas River and Mineral Creek, downstream of mixing zones of acid tributaries. Seasonal variation of metal concentrations is reflected in variation in toxicity of stream water. Loadings of dissolved metals to the upper Animas River and tributaries are greatest during summer, during periods of high stream discharge from snowmelt and monsoonal rains, but adverse effects on stream biota may be greater during winter low-flow periods, when stream flows are dominated by inputs of groundwater and contain greatest concentrations of dissolved metals. Fine stream-bed sediments of the upper Animas River watershed also contain elevated concentrations of potentially toxic metals. Greatest sediment metal concentrations occur in the Animas River upstream from Silverton, where there are extensive deposits of mine and mill tailings, and in mixing zones in the Animas River and lower Mineral Creek, where precipitates of Fe and Al oxides also contain high concentrations of other metals. This report summarizes the findings of a series of toxicity studies in streams of the upper Animas River watershed, conducted on-site and in the laboratory between 1998 and 2000. The objectives of these studies were: (1) to determine the relative toxicity of stream water and fine stream-bed sediments to fish and invertebrates; (2) to determine the seasonal range of toxicity in stream water; (3) to develop site-specific thresholds for toxicity of Zn and Cu in stream water; and (4) to develop models of the contributions of Cu and Zn to toxicity of stream water, which may be used to characterize toxicity before and after planned remediation efforts. We evaluated the toxicity of metal-contaminated sediments by conducting sediment toxicity tests with two species of benthic invertebrates, the midge, Chironomus tentans. and the amphipod, Hyalella azteca. Laboratory toxicity tests with both taxa, exposed to fine stream-bed sediments collected in September 1997, showed some evidence of sediment toxicity, as survival of midge larvae in sediments from Cement Creek (C48) and lower Mineral Creek (M34), and growth of amphipods in sediments from these sites and three Animas River sites (A68, Animas at Silverton; A72, Animas below Silverton, and A73, Animas at Elk Park) were significantly reduced compared to a reference site, South Mineral Creek (SMC) . Amphipods were also exposed to site water and fine stream-bed sediment, separately and in combination, during the late summer low flow period (August-September) of 1998. In these studies, stream water, with no sediment present, from all five sites tested (same sites as above, except C48) caused 90% to 100% mortality of amphipods. In contrast, significant reductions in survival of amphipods occurred at two sites (A72 and SMC) in exposures with field-collected sediment plus stream water, and at only one site (A72) in exposures with sediments and clean overlying water. Concentrations of Zn, Pb, Cu, and Cd were high in both sediment and pore water (interstitial water) from most sites tested, but greatest sediment toxicity was apparently associated with greater concentrations of Fe and/or Al in sediments. These results suggest that fine stream-bed sediments of the more contaminated stream reaches of the upper Animas River watershed are toxic to benthic invertebrates, but that these impacts are less serious than tox

Biological Science Report↗

USGS2004

Waterfowl migration on Klamath Basin National Wildlife Refuges 1953-2001

The Klamath Basin National Wildlife Refuge (NWR) complex, located in northeastern California and southern Oregon, is situated on a major Pacific Flyway migration corridor connecting waterfowl breeding grounds in the north with major wintering grounds in California and Mexico. The complex comprises five waterfowl refuges including Lower Klamath NWR, Tule Lake NWR, Upper Klamath NWR, Klamath Marsh NWR, and Clear Lake NWR, and one bald eagle refuge, Bear Valley NWR. Lower Klamath and Tule Lake NWRs are the largest refuges in the complex; historically, they supported some of the greatest autumn and spring concentrations of migrating waterfowl in North America. Starting in 1953, standardized waterfowl surveys from small aircraft have been conducted in autumn through spring. This report summarizes waterfowl migration activity (i.e., abundance, species composition, distribution on refuges, and chronology) over four time periods—the long-term (1953-2001), early (1953-76), recent (1977-2001), and the most recent (1998-2001)—to describe changing patterns of migration on Klamath Basin refuges from autumn 1953 to spring 2001. Over the long term, waterfowl abundance (birds per day) on the refuge complex averaged about 1.0 million in autumn and about 360,000 in spring. A record peak count of 5.8 million waterfowl was recorded September 24-25, 1958. Average abundance of autumn staging waterfowl for the refuge complex, after reaching record levels in the 1950s and early 1960s, began a decline that lasted until the 1980s. A gradual recovery occurred during the 1990s, but autumn abundance has not recovered to pre-1970 levels. In contrast to autumn, average spring abundance was generally lower in the early decades but has gradually increased through the 1990s, particularly on Lower Klamath NWR. Dabbling ducks represented an average of 68% of all waterfowl in autumn and 55% in spring for the long term. Northern pintail ( Anas acuta ) was dominant, representing 62% of all dabblers in autumn and 51% in spring. A significant decline in pintail abundance starting in the late 1950s altered waterfowl composition on Klamath Basin refuges. As pintail declined, other species such as mallard ( Anas platyrhynchos ) and green-winged teal ( Anas crecca ) increased in abundance. Although Arctic nesting geese, including white-fronted ( Anser albifrons ), cackling Canada ( Branta canadensis minima ), white geese (lesser snow [ Chen caerulescens caerulescens ], and Ross’s [ Chen rossii ]) have become less prominent in recent decades, they reached an historically high abundance during autumn in the 1960s and 1970s, particularly on Tule Lake NWR. Tule Lake NWR supported the highest average autumn waterfowl populations until surpassed by Lower Klamath NWR around 1980. During the recent period (1977-2001), Lower Klamath NWR accounted for 60% of all waterfowl using the refuge complex in autumn and 61% in spring. Habitat diversity and wetland productivity contributed to its greater waterfowl abundance. Tule Lake NWR supported the most geese over the long term, 79% in autumn and 66% in spring; however, total waterfowl abundance on this refuge in autumn has been in decline, likely because of reduced diversity and productivity of sumps in the refuge. Upper Klamath, Klamath Marsh, and Clear Lake NWRs accounted for less than 8% of total waterfowl use in autumn and spring but provided diverse habitats for migrants. Waterfowl use-days on Klamath Basin refuges typically peaked in mid-autumn, decreased as migrants passed through the basin, and then reached a lesser peak during spring passage. Waterfowl abundance reached a pronounced peak in autumn during the early period (1953-76), but spring peak buildup was much less pronounced. For the recent period the autumn peak was more subdued. Waterfowl abundance, species composition, and distribution on Klamath Basin refuges have fluctuated over the decades and have been influenced by events such as productivity on breeding grounds and habitat conditions on wintering grounds that cause shifts in migration patterns. A major challenge for the future appears to be the availability of adequate water for wetland management on Klamath Basin refuges.

California, Oregon↗

USGS2000

Field guide to malformations of frogs and toads: with radiographic interpretations

In 1995, students found numerous malformed frogs on a field trip to a Minnesota pond. Since that time, reports of malformed frogs have increased dramatically. Malformed frogs have now been reported in 44 states in 38 species of frogs, and 19 species of toads. Estimates as high as 60% of the newly metamorphosed frog populations have had malformations at some ponds (NARCAM, ’99). The wide geographic distribution of malformed frogs and the variety of malformations are a concern to resource managers, research scientists and public health officials. The potential for malformations to serve as a signal of ecosystem disruption, and the affect this potential disruption might have on other organisms that share those ecosystems, has not been resolved. Malformations represent an error that occurred early in development. The event that caused the developmental error is temporally distant from the malformation we see in the fully developed animal. Knowledge of normal developmental principles is necessary to design thoughtful investigations that will define the events involved in abnormal development in wild frog populations. Development begins at the time an egg is fertilized and progresses by chemical communication between cells and cell layers. This communication is programmed through gene expression. Malformations represent primary errors in development, errors in chemical communication or translation of genetic information. Deformations arise later in development and usually result from the influence of mechanical factors (such as amputation) that alter shape or anatomy of a structure that has developed normally. The occurrence and the type of malformations are influenced by the type of error or insult as well as the timing of the error (the developmental stage at which the error occurred). The appearance of the malformation can therefore provide clues that suggest when the error may have occurred. If the malformation is an incomplete organ, such as an incomplete limb, the factor or insult acted during a susceptible period prior to organ completion. Although defining the anatomy of the malformed metamorphosed frog can give us an idea of the approximate window during which the developmental insult was initiated, and might even suggest the type of insult that may have occurred, the morphology of the malformation does not define the cause. To define causes and mechanisms of frog malformations we need to use well designed investigations that are different from traditional tests used in acute toxicity or disease pathogenicity studies. When investigating malformations in metamorphosed frogs, we are looking at the affect of exposure to an agent that occurred early in tadpole development. Therefore investigations to determine causes of malformations need to look at agents that are present in the tadpoles or their environments at these early developmental times. Laboratory experiments need to expose embryos and tadpoles to suspect agents at appropriate developmental stages and look at acute results, such as toxicity and death, as well as following the developmental process to completion to determine the impact of the agent on the developing tadpole and the fully developed frog. This means holding animals past metamorphic climax to assure that the anatomy and physiology of the adult have developed normally. As we look at field collections of abnormal frogs, we need to keep in mind that these collections reflect survivors only. We are looking at malformations that were not fatal to tadpoles. We cannot assume that because we do not collect other malformations, they did not exist. More work needs to be done on the developing tadpole, in the field and in the laboratory, to better elucidate the range, frequency, character and causes of anuran malformations.

Biological Science Report↗

USGS2026

Ten new insights in climate science 2025

Interdisciplinary understanding is vital for delivering sound climate policy advice. However, navigating the ever-growing and increasingly diverse scholarly literature on climate change is challenging for any individual researcher. This annual synthesis highlights and explains recent advances across a variety of fields of climate change research. This year, the 10 insights focus on: (1) the record-warmth of 2023/2024 and the elevated Earth energy imbalance; (2) acceleration of ocean warming and intensifying marine heatwaves; (3) northern land carbon sinks under strain; (4) reinforcing feedback between biodiversity loss and climate change; (5) accelerated depletion of groundwater; (6) global dengue incidence; (7) global income losses and labour productivity declines; (8) strategic scaling of CDR; (9) integrity challenges in carbon credit markets and emerging responses; and (10) effective policy mixes for emissions reductions. The insights have been written to be accessible to researchers from different fields, serving as entry-points to specific topics, as well as providing an overview of the evolving landscape of climate change research. In the final section, the insights are used to develop overarching policy-relevant messages. This paper provides the basis for a science-policy report that was shared with all Party delegations ahead of COP30 in Belém, Brazil.

Global Sustainability↗

USGS2012

Fort Collins Science Center-Fiscal year 2011 science accomplishments

The Fort Collins Science Center (FORT) is a multi-disciplinary research and development center of the U.S. Geological Survey located in Fort Collins, Colorado. FORT research focuses on the needs of land- and water-management bureaus within the U.S. Department of the Interior, other Federal agencies, and State, Tribal, and non-government organizations. We emphasize a multi-disciplinary science approach to provide information for natural resource management decisionmaking. Our vision is to maintain and continuously improve the integrated, collaborative, world-class research needed to inform effective, science-based land management. The 2011 science accomplishments report provides an executive summary highlighting key achievements, an appendix of 68 one-page accomplishment descriptions organized by U.S. Geological Survey Mission Area, and a complete list of publications and other products generated in FY2011. The executive summary includes a table cross-referencing all major FY11 accomplishments with the various Mission Areas each supports.

Colorado↗

USGS1972

Applications of the generalized information processing system (GIPSY)

The Generalized Information Processing System (GIPSY) stores and retrieves variable-field, variable-length records consisting of numeric data, textual data, or codes. A particularly noteworthy feature of GIPSY is its ability to search records for words, word stems, prefixes, and suffixes as well as for numeric values. Moreover, retrieved records may be printed on pre-defined formats or formatted as fixed-field, fixed-length records for direct input to other-programs, which facilitates the exchange of data with other systems. At present there are some 22 applications of GIPSY falling in the general areas of bibliography, natural resources information, and management science, This report presents a description of each application including a sample input form, dictionary, and a typical formatted record. It is hoped that these examples will stimulate others to experiment with innovative uses of computer technology.

Open-File Report↗

USGS2024

Land use and dog park associations with Escherichia coli in the Chattahoochee River National Recreation Area watershed

A recent study in the Chattahoochee River National Recreation Area (CHAT) indicated that dogs were a primary source of fecal contamination in the Chattahoochee River and that at least some of the contamination in the river was coming from locations outside of CHAT. The study herein sought to determine if dog parks in the CHAT watershed were sources of dog fecal contamination in streams within the watershed. Escherichia coli ( E. coli ) data were compiled from the Chattahoochee Riverkeeper Neighborhood Water Watch (NWW) program for sites within the CHAT watershed. Information about dog park locations within the Atlanta metropolitan area was compiled through online searches. Wilcoxon rank-sum tests, forward stepwise linear regression, and Spearman rank correlations were used to investigate the relations between seasonal E. coli levels ( E. coli concentration and the proportion of samples that exceeded the U.S. Environmental Protection Agency beach action value [BAV]) and dog parks within the drainage basins. NWW sites with dog parks within the drainage basins had higher E. coli concentrations in the summer and winter, and samples exceeded the BAV more frequently in the winter than sites without dog parks within the drainage basins. Escherichia coli levels in the summer and winter were positively correlated with the number of dog parks within the drainage basins, indicating that E. coli concentrations and the frequency of BAV exceedances were seasonally higher at sites with more dog parks than at sites with fewer dog parks within the drainage basins. Escherichia coli concentrations in the summer were negatively correlated with distance to the nearest dog park in the drainage basin, indicating that sites with at least one dog park in close proximity had higher E. coli concentrations in the summer than sites for which the closest dog park was more distantly located. However, results of this study may have been influenced by the high degree of spatial autocorrelation in the data caused by overlapping drainage basins. Additionally, E. coli occurs in the gut systems of many species, so concentrations of E. coli may not represent levels of dog fecal contamination. Dog waste in residential yards and neighborhoods is a possible source of contamination in the watershed that could be investigated in future studies on sources of fecal contamination in the CHAT watershed. Utilizing dog-specific genetic markers in future studies would help reduce ambiguity in data interpretation.

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