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Status and trends of Caribbean coral reefs: 1970-2012

This it the 9th status report since the Global Coral Reef Monitoring Network (GCRMN) was founded in 1995 was the data arm of the International Coral Reef Initiative (ICRI) to document the ecological condition or corral reefs, strengthen monitoring efforts, and link existing organizations and people working on reefs worldwide. The US Government provided the initial funding to help set up a global network of coral reef workers and has continued to provide core support. Since then, the series of reports have aimed to present the current status of coral reefs of the world or particular regions, the major threats to reefs and their consequences, and any initiative undertaken under the auspices of ICRI or other bodies to arrest or reverse the decline of coral reefs. IUCN assumed responsibility for hosting the global coordination of the GCRMN in 2010 under the scientific direction of Jeremy Jackson with the following objectives: 1. Document quantitatively the global status and trends for corals, macroalgae, sea urchins, and fishes based on available data from individual scientists as well as the peer reviewed scientific literature, monitoring programs, and report. 2. Bring together regional experts in a series of workshops to involve them in data compilation, analysis, and synthesis. 3. Integrate coral reef status and trends with independent environmental, management, and socioeconomic data to better understand the primary factors responsible for coral reef decline, the possible synergies among factors that may further magnify their impacts, and how these stresses may be more effectively alleviated. Work with GCRMN partners to establish simple and practical standardized protocols for future monitoring and assessment. Disseminate information and results to help guide member state policy and actions. The overarching objective is to understand why some reefs are much healthier than others, to identify what kinds of actions have been particularly beneficial or harmful, and to vigorously communicate results in simple and straightforward terms to foster more effective conservation and management. This and subsequent reports will focus on separate biogeographic regions in a stepwise fashion and combine all of the results for a global synthesis in the coming years. We began in the wide Caribbean region because the historical data are so extensive and to refine methods of analysis before moving on to other regions. This report documents quantitative trends for Caribbean reef corals, macroalgae, sea urchins, and fishes based on data from 90 reef locations over the past 43 tears. This is the first report to combine all these disparate kinds of data in a single place to explore how the different major components of coral reef ecosystems interact on a broadly regional oceanic scale. We obtained data from more than 35,000 ecological surveys carried out by 78 principal investigators (PIs) and some 200 colleagues working in 34 countries, states, and territories throughout the wide Caribbean region. We conducted two workshops in Panama and Brisbane, Australia to bring together people who provided the data to assist in data quality control, analysis, and synthesis. The first workshop at the Smithsonian Tropical Research Institute (STRI) in the Republic of Panama 29 April to 5 May, 2012 included scientists from 18 countries and territories to verify and expand the database and to conduct exploratory analyses of status and trends. Preliminary results based on the Panama workshop were presented to the DC Marine Community and Smithsonian Institution Senate of Scientists in May 2012 and at the International Coral Reef Symposium (ICRS) and annual ICRI meeting in Cairns, Australia in July 2012. The second workshop in Brisbane, Australia in December 2012 brought together eight coral reef scientists for more detailed data analysis and organization of results for this report and subsequent publications. Subsequent presentations to solicit comments while the report was being finalized were made in 2013-2014 at the ICRI General meeting in Belize, the biennial meeting of the Association of Island Marine Laboratories in Jamaica, the Panamerican Coral Reef Congress in Merida, Mexico, the annual meeting of he Western Society of Naturalists, and numerous universities in Costa Rica, the USA and Europe. The main body of the report is in two sections. Part I provides an overview of overall status and trends and detailed analyses of the multiple factors responsible for the decline of reef corals throughout the entire wider Caribbean region. The editors are grateful to all the people who have so generously provided data and expertise, but we assume responsibility for the many statements, conclusions and recommendations and final wording of the text. Part II provides a more detailed analysis of the status and trends of coral reef ecosystems in the 32 countries, states, and territories for which we have data. The format includes maps indicating all locations sampled, a detailed table of data sources and sites surveyed, timelines of ecologically important evens, and relevant references. Each of these reports was compiled in consultation with local experts and all those who provided data and advice are listed as authors of each country report.

Report↗

Pit tag application in native freshwater mussels: Case studies across small, medium, and large rivers

Since their first use in the mid-1980s, external passive integrated transponder (PIT) tags have facilitated innovative investigations into multiple biological traits of animals. For native freshwater mussels, PIT tags are frequently used in capture-mark-recapture applications because they allow repeated, noninvasive sampling, are easy to apply, have high retention rates, and have negligible short-term effects on growth and survival. Because of these traits, resource managers and scientists are using PIT-tagged animals to estimate survival and movement of mussels associated with restoration efforts. However, consistency is limited in how PIT tags are affixed, monitored, and reported. Thus, our objectives were to (1) share our collective experiences in PIT tagging mussels across three case studies in small, medium, and large rivers and (2) propose guidelines for tagging and reporting data from PIT tag studies with native freshwater mussels to facilitate comparisons across future studies. The number of studies that have marked mussels with PIT tags has increased over the past 10 years. The ability to detect mussels using PIT tags has substantially advanced research in three areas of mussel ecology: (1) estimating vital rates (e.g., growth and survival), (2) tracking movements and behaviors of captively propagated, wild, and translocated individuals, and (3) improving our understanding of life history traits, such as reproductive timing. Each case study offers insights on tagging methods, tag loss, tag retention, and monitoring frequency across multiple species that range in conservation status from common to rare. We conclude with best-practice guidelines for placing PIT tags on freshwater mussels and a list of variables that could be reported in future studies to facilitate cross-system comparisons.

Freshwater Mollusk Biology and Conservation↗

Mechanisms of impact and potential recovery of nearshore vertebrate predators following the 1989 Exxon Valdez oil spill

The 1989 spill of some 42 million L of crude oil into Prince William Sound, Alaska, represents not only the largest tanker spill in United States history, but the world’s largest spill in northern waters. Acute effects have been studied extensively. However, efforts to quantify the spill’s long-term chronic effects and develop defensible restoration measures have been plagued by varying levels of scientific uncertainty. That such uncertainty exists is not unexpected. The spill occurred in Prince William Sound’s highly variable physical setting typified by its complex oceanography and fjord-like geomorphology. Additionally, uncertainty was driven by the scarcity of precise pre-spill population estimates and spotty life-history information for most species. The research reported herein in, structured in eight primary papers and 27 supporting papers (appendices), documents the state of recovery and assessments of continuing constraints to population recovery for four vertebrate predators (sea otter Enhydra lutris , harlequin duck Histrionicus histrionicus , river otter Lontra canadensis , and pigeon guillemot Cepphus columba ) whose recovery status remained uncertain some 5 years after the Exxon Valdez oil spill. These species are used in a collective weight of evidence approach to better understand the process of coastal community recovery. Each species is examined for the strength of information it brings in health, population, and trophic metrics to support or reject the hypothesis of continuing oil effects in the nearshore system versus the alternatives that food constraints or demographic bottlenecks limit these focal species. While data for individual species contain various levels of uncertainty, scientific confidence is developed in the following picture when examined across species, metric, and hypothesis: Within the nearshore coastal environment, sporadic releases of residual oil are occurring, and benthic species, primarily invertebrates, are being exposed in a temporally and spatially patchy manner sufficient to transport oil up through the food chain. Thus, for the two invertebrate-feeders, sea otter and harlequin duck, evidence exists over several lines of investigation to suggest that local-scale populations continue to be constrained not by food availability or natural demographic processes, but by increased levels of mortality coincident with continued exposure to residual oil. Conversely, weight of evidence suggests that only limited direct oil-related effects are being transferred through the fish trophic pathway. Sufficient evidence suggests recovery is occurring in river otter populations, while the lack of recovery in pigeon guillemot may be attributed to food limitations (both natural and indirectly related to the spill) and/or slow demographic response to initial acute mortalities. Individual lines of investigation often contained uncertainty, but the collective weight of evidence presented in this multipaper volume indicates lack of full recovery of the nearshore ecosystem from the Exxon Valdez oil spill nearly a decade following the event. Integrated, multispecies approaches can allow sufficient weight of evidence to develop despite inherent system variability or data limitations and, thus, facilitate both better societal understanding of such pollution events and development of appropriate restoration responses.

Alaska↗

Buzzards Bay salt marshes: Vulnerability and adaptation potential

Salt marshes with lush grass meadows teeming with shorebirds are iconic features of the Buzzards Bay coast and provide opportunities for recreation, aesthetic enjoyment, as well as important environmental benefits. These productive coastal wetlands are important because they protect properties from storm surges, remove nutrients from the water and carbon from the atmosphere, and provide critical habitats for fish, shellfish, and birds. Found where the land meets the sea, salt marshes are naturally dynamic features that change with rising seas, waves, ice, and storms. In the past, humans purposely altered salt marshes by filling them to create buildable land or digging drainage ditches. These major alterations harmed marsh structure and health. In recent decades, however, marshes are degrading because of more diffuse and complex pressures such as nutrient pollution, sea level rise, major storms, and crab overgrazing. As a result, at many places along the East Coast, marshes have crumbling banks and large areas where the plants have died, leaving behind mudflats. The Buzzards Bay Coalition and the Buzzards Bay National Estuary Program began field monitoring of salt marshes around Buzzards Bay in 2019 to document changes (map below shows sites). We partnered with the U.S. Geological Survey and the Woodwell Climate Research Center to use aerial tools to investigate how different characteristics of the long-term marsh sites and their watersheds affect the marsh’s current health and likely future. This report brings together the results of on the ground monitoring with data from aerial imagery to look at marsh status at 12 long-term monitoring sites based on existing stressors, current marsh conditions, and potential for adaptation.

Massachusetts↗

Evaluation of freshwater mussel relocation as a conservation and management strategy

The relocation of unionacean mussels is commonly used as a conservation and management tool in large rivers and streams. Relocation has been used to recolonize areas where mussel populations have been eliminated by prior pollution events, to remove mussels from construction zones and to re-establish populations of endangered species. More recently, relocation has been used to protect native freshwater mussels from colonization by the exotic zebra mussel Dreissena polymorpha. We conducted a literature review of mussel relocations and evaluated their relative success as a conservation and management strategy. We found that 43% of all relocations were conducted because of construction projects that were forced to comply with the Endangered Species Act 1973 and that only 16% were monitored for five or more consecutive years. Most (43%) relocation projects were conducted from July to September, presumably a period when reproductive stress is relatively low for most species and the metabolic rate is sufficient for reburrowing in the substrate. The mortality of relocated mussels was unreported in 27% of projects; reported mortality varied widely among projects and species and was difficult to assess. The mean mortality of relocated mussels was 49% based on an average recovery rate of 43%. There is little guidance on the methods for relocation or for monitoring the subsequent long-term status of relocated mussels. Based on this evaluation, research is needed to develop criteria for selecting a suitable relocation site and to establish appropriate methods and guidelines for conducting relocation projects.

Regulated Rivers: Research & Management↗

Summary of wildlife-related research on the coastal plain of the Arctic National Wildlife Refuge, Alaska, 2002–17

We summarize recent (2002–17) publicly available information from studies within the 1002 Area of the Arctic National Wildlife Refuge as well as terrestrial and coastal ecosystems elsewhere on the Arctic Coastal Plain that are relevant to the 1002 Area. This report provides an update on earlier research summaries on caribou (Rangifer tarandus), forage quality and quantity, polar bears (Ursus maritimus), muskoxen (Ovibos moschatus), and snow geese (Chen caerulescens). We also provide information on new research related to climate, migratory birds, permafrost, coastal erosion, coastal lagoons, fish, water resources, and potential effects of industrial disturbance on wildlife. From this literature review, we noted evidence for change in the status of some wildlife and their habitats, and the lack of change for others. In the 1002 Area, muskox numbers have decreased and the Porcupine Caribou Herd has exhibited variation in use of the area during the calving season. Polar bears are now more common on shore in summer and fall because of declines in sea ice in the Beaufort Sea. In a study spanning 25 years, there were no significant changes in vegetation quality and quantity, soil conditions, or permafrost thaw in the coastal plain of the 1002 Area. Based on studies from the central Arctic Coastal Plain, there are persistent and emerging uncertainties about the long-term effects of energy development for caribou. In contrast, recent studies that examined direct and indirect effects of industrial activities and infrastructure on birds in the central Arctic Coastal Plain found little effect for the species and disturbances examined, except for the possibility of increased predator activity near human developments.

Alaska↗

A method to establish seismic noise baselines for automated station assessment

We present a method for quantifying station noise baselines and characterizing the spectral shape of out-of-nominal noise sources. Our intent is to automate this method in order to ensure that only the highest-quality data are used in rapid earthquake products at NEIC. In addition, the station noise baselines provide a valuable tool to support the quality control of GSN and ANSS backbone data and metadata. The procedures addressed here are currently in development at the NEIC, and work is underway to understand how quickly changes from nominal can be observed and used within the NEIC processing framework. The spectral methods and software used to compute station baselines and described herein (PQLX) can be useful to both permanent and portable seismic stations operators. Applications include: general seismic station and data quality control (QC), evaluation of instrument responses, assessment of near real-time communication system performance, characterization of site cultural noise conditions, and evaluation of sensor vault design, as well as assessment of gross network capabilities (McNamara et al. 2005). Future PQLX development plans include incorporating station baselines for automated QC methods and automating station status report generation and notification based on user-defined QC parameters. The PQLX software is available through the USGS (http://earthquake. usgs.gov/research/software/pqlx.php) and IRIS (http://www.iris.edu/software/ pqlx/).

Seismological Research Letters↗

Water resources activities in Kentucky, 1993-94

The U.S. Geological Survey (USGS) is the principal Federal water-resources data collection and investigation agency. Through the Water Resources Division District Office in Kentucky, the USGS investigates the occurrence, distribution, quantity, movement, and chemical and biological quality of surface and ground water in the State. The mission of this program is to collect, interpret, and publish information on water resources. Almost all research and data collection is a cooperative effort in which planning and financial support are shared by State and local agencies and governments. Other activities are funded by other Federal agencies or by direct Congressional appropriation. This report is intended to inform the public and cooperating agencies, vitally interested in the water resources of Kentucky, as to the current status of the Distfict's data collection and investigation program. Included in the report are summaries of water-resources activities in Kentucky conducted by the USGS. Also included is a description of the USGS mission and program, District organization, funding sources and cooperating agencies, and a list of USGS publications relevant to the water resources of the State.

Open-File Report↗

The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI’s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI’s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists’ League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program’s development and success. The value of ARMI’s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI’s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI’s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report↗

On Chinese earthquake history - An attempt to model an incomplete data set by point process analysis

Since the 1950s, the Academia Sinica in Peking, People's Republic of China, has carried out extensive research on the Chinese earthquake history. With a historical record dating back some 3000 years, a wealth of information on Chinese earthquakes exists. Despite this monumental undertaking by the Academia Sinica, much work is still necessary to correct the existing earthquake data for historical changes in population, customs, modes of communication, and dynasties. In this paper we report on the status of our investigation of Chinese earthquake history and present some preliminary results. By applying point process analysis of earthquakes in 'Central China', we found suggestions of (1) lower earthquake activity at intervals of about 175 years and 375 years, and (2) higher earthquake activity at an interval of about 300 years.

Pure and Applied Geophysics PAGEOPH↗

Perceptions of species abundance, distribution, and diversity: Lessons from four decades of sampling on a government-managed reserve

We examined data relative to species abundance, distribution, and diversity patterns of reptiles and amphibians to determine how perceptions change over time and with level of sampling effort. Location data were compiled on more than one million individual captures or observations of 98 species during a 44-year study period on the US Department of Energy’s (DOE) Savannah River Site National Environmental Research Park (SRS-NERP) in South Carolina. We suggest that perceptions of herpetofaunal species diversity are strongly dependent on level of effort and that land management decisions based on short-term data bases for some faunal groups could result in serious errors in environmental management. We provide evidence that acquiring information on biodiversity distribution patterns is compatible with multiyear spatially extensive research programs and also provide a perspective of what might be achieved if long-term, coordinated research efforts were instituted nationwide. To conduct biotic surveys on government-managed lands, we recommend revisions in the methods used by government agencies to acquire and report biodiversity data. We suggest that government and industry employees engaged in biodiversity survey efforts develop proficiency in field identification for one or more major taxonomic groups and be encouraged to measure the status of populations quantitatively with consistent and reliable methodologies. We also suggest that widespread academic cooperation in the dissemination of information on regional patterns of biodiversity could result by establishment of a peer-reviewed, scientifically rigorous journal concerned with status and trends of the biota of the United States.

Environmental Management↗

Compilation of gallium resource data for bauxite deposits

Gallium (Ga) concentrations for bauxite deposits worldwide have been compiled from the literature to provide a basis for research regarding the occurrence and distribution of Ga worldwide, as well as between types of bauxite deposits. In addition, this report is an attempt to bring together reported Ga concentration data into one database to supplement ongoing U.S. Geological Survey studies of critical mineral resources. The compilation of Ga data consists of location, deposit size, bauxite type and host rock, development status, major oxide data, trace element (Ga) data and analytical method(s) used to derive the data, and tonnage values for deposits within bauxite provinces and districts worldwide. The range in Ga concentrations for bauxite deposits worldwide is <10 to 812 parts per million (ppm), with an average of 57 ppm. Gallium concentrations in lateritic bauxites range from below detection (< 8 ppm) to 146 ppm; the average concentration is 57 ppm Ga. The average Ga concentration for karst bauxite deposits is 58 ppm with a range between <10 to 180 ppm Ga. As a result, there are no substantial differences in gallium concentrations between karst- and laterite-type bauxites. We calculate the range in geologically available Ga in bauxite deposits worldwide between 30 and 82,720 metric tons (t), with an average of 14,909 t.

Open-File Report↗

Science needs of southeastern grassland species of conservation concern: A framework for species status assessments

The unglaciated southeastern United States is a biodiversity hotspot, with a disproportionate amount of this biodiversity concentrated in grasslands. Like most hotspots, the Southeast is also threatened by human activities, with the total reduction of southeastern grasslands estimated as 90 percent (upwards to 100 percent for some types) and with many threats escalating today. This report summarizes the results of a multistakeholder workshop organized by the Southeastern Grasslands Initiative and the U.S. Geological Survey, held in January 2020 to provide a scientific needs assessment to help inform the Species Status Assessment (SSA) process under the U.S. Endangered Species Act, with a focus on grassland species and communities of conservation concern in the southeastern United States. This report reviews the ecology of southeastern grasslands, including influences on their origin, maintenance, and high species richness and endemism; presents findings from the workshop; and discusses science questions, hypotheses, and possibilities for future research projects to help fill key knowledge gaps. Participants in the January 2020 workshop, representing diverse expertise in various topics in southeastern grassland ecology, were tasked with identifying major threats to grassland species in the Southeast as well as potential ways to make the SSA process more efficient and effective. An underlying assumption and starting place for workshop discussion was that an ecosystem-based approach to the SSA process is more cost-efficient than a species-by-species approach, in large part because many species with similar biological requirements can be addressed by the same actions. Nevertheless, one partner in this effort, the U.S. Fish and Wildlife Service, does require specific attention be given to taxa that have been petitioned for Federal listing, though as often as possible these taxa are considered alongside a larger group of priority taxa with an ecosystem approach. For group discussions, workshop participants followed a modified “World Café” method, a structured conversational approach for knowledge sharing. Group discussions focused on five categories of threats to grassland communities and species: (1) habitat loss, fragmentation, and disruption of functional population connectivity; (2) climate change, especially changes in temperature and precipitation, including intensity and seasonality, and impacts on soil moisture, groundwater levels, and other ecosystem parameters; (3) changes to disturbance regimes, as influenced by climate and land-use change, extinctions, and human attitudes and behaviors; (4) invasive species (not limited to nonnative species); and (5) localized or subregional impacts such as sea-level rise. In addition to group discussions, workshop participants—as well as other grassland experts who were unable to attend the workshop—completed a preworkshop survey concerning challenges and opportunities for grassland conservation. Findings reported here under each of these topics represent ideas, problems, hypotheses, and questions identified by a diverse community of grassland managers and researchers which may be addressed by future research and monitoring in southeastern grassland ecosystems to help guide science-based conservation of grassland-dependent species.

Alabama, Arkansas, Florida, Georgia, Kentucky, Lou↗

Report of the American Ornithologists' Union Committee on Conservation, 1976-77. The recovery team-recovery plan approach to conservation of endangered species; A status summary and appraisal

The U.S. Endangered Species Act of 1973 (P.L. 93-205) identifies the U.S. Fish and Wildlife Service (USFWS), under authority delegated by the Secretary of the Interior, as the lead agency charged with the conservation of most endangered species in the United States. Some marine species are the responsibility of the Secretary of Commerce, and the responsibility for marine turtles is shared. In 1972 the USFWS sent preliminary instructions to certain field researchers to develop a unified coordinated plan for the recovery of the species they were working with. These were the precursors of recovery teams and recovery plans. The plans, and the teams to draft and help implement them, became one significant means of fulfilling the USFWS' obligations under the Endangered Species Act, particularly Sections 6 and 7, which deal with state and interagency cooperation.

The Auk↗

Effectiveness of post-fire seeding at the Fitzner-Eberhardt Arid Land Ecology Reserve, Washington

In August 2007, the Milepost 17 and Wautoma fires burned a combined total of 77,349 acres (31,302 hectares) of the Fitzner-Eberhardt Arid Land Ecology Reserve (ALE), part of the Hanford Reach National Monument administered by the U.S. Fish and Wildlife Service (USFWS) Mid-Columbia National Wildlife Refuge. In 2009, the USFWS implemented a series of seeding and herbicide treatments to mitigate potential negative consequences of these fires, including mortality of native vegetation, invasion of Bromus tectorum (cheatgrass), and soil erosion. Treatments included combinations of seeding (drill and aerial), herbicides, and one of six different mixtures of species. Artemisia tridentata ssp. wyomingensis (Wyoming big sagebrush) also was planted by hand in a small area in the southern end of the fire perimeter. Due to differences in plant communities prior to the fire and the multiple treatments applied, treatments were grouped into five treatment associations including mid-elevation aerial seedings, low-elevation aerial seedings, low-elevation drill seedings, high-elevation drill seeding, and no seeding treatments. Data collected at the mid-elevation aerial seedings indicate that the seeding did not appear to increase the density of seedlings compared to the non-seeded area in 2010. At the low-elevation aerial seedings, there were significantly more seedlings at seeded areas as compared to non-seeded areas. Low densities of existing perennial plants probably fostered a low-competition environment enabling seeds to germinate and emerge in 2010 during adequate moisture. Low-elevation drill seedings resulted in significant emergence of seeded grasses in 2009 and 2010 and forbs in 2010. This was likely due to adequate precipitation and that the drill seeding assured soil-to-seed contact. At the high-elevation drill seeding, which was implemented in 2009, there were a high number of seedlings in 2010. Transplanting of A. tridentata following the fires resulted in variable survival rates that warrant further testing; however, transplants located closer to washes tended to have the highest survival rates. Overall, the low-elevation aerial and drill seedings, and the high-elevation drill seedings resulted in significant numbers of seedlings. Further research is needed on methods that provide land managers with critical information about whether or not to seed post-fire areas including status of pre-fire vegetation and estimates of plant mortality due to fire.

Open-File Report↗

Evaluation of Terrestrial LIDAR for Monitoring Geomorphic Change at Archeological Sites in Grand Canyon National Park, Arizona

This report presents the results of an evaluation of terrestrial light detection and ranging (LIDAR) for monitoring geomorphic change at archeological sites located within Grand Canyon National Park, Ariz. Traditionally, topographic change-detection studies have used total station methods for the collection of data related to key measurable features of site erosion such as the location of thalwegs and knickpoints of gullies that traverse archeological sites (for example, Pederson and others, 2003). Total station methods require survey teams to walk within and on the features of interest within the archeological sites to take accurate measurements. As a result, site impacts may develop such as trailing, damage to cryptogamic crusts, and surface compaction that can exacerbate future erosion of the sites. National Park Service (NPS) resource managers have become increasingly concerned that repeated surveys for research and monitoring purposes may have a detrimental impact on the resources that researchers are trying to study and protect. Beginning in 2006, the Sociocultural Program of the U.S. Geological Survey's (USGS) Grand Canyon Monitoring and Research Center (GCMRC) initiated an evaluation of terrestrial LIDAR as a new monitoring tool that might enhance data quality and reduce site impacts. This evaluation was conducted as one part of an ongoing study to develop objective, replicable, quantifiable monitoring protocols for tracking the status and trend of variables affecting archeological site condition along the Colorado River corridor. The overall study consists of two elements: (1) an evaluation of the methodology through direct comparison to geomorphologic metrics already being collected by total station methods (this report) and (2) an evaluation of terrestrial LIDAR's ability to detect topographic change through the collection of temporally different datasets (a report on this portion of the study is anticipated early in 2009). The main goals of the first element of study were to 1. test the methodology and survey protocols of terrestrial LIDAR surveying under actual archeological site field conditions, 2. examine the ability to collect topographic data of entire archeological sites given such constraints as vegetation and rough topography, and 3. evaluate the ability of terrestrial LIDAR to accurately map the locations of key geomorphic features already being collected by total station methods such as gully thalweg and knickpoint locations. This report focuses on the ability of terrestrial LIDAR to duplicate total station methods, including typical erosion-related change features such as the plan view gully thalweg location and the gully thalweg long profile. The report also presents information concerning the use of terrestrial LIDAR for archeological site monitoring in a general sense. In addition, a detailed comparison of the site impacts caused by both total station and terrestrial LIDAR survey methods is presented using a suite of indicators, including total field survey time, field footstep count, and data-processing time. A thorough discussion of the relative benefits and limitations of using terrestrial LIDAR for monitoring erosion-induced changes at archeological sites in Grand Canyon National Park concludes this report.

Open-File Report↗

CHIPS: A New Way to Monitor Colonias Along the United States-Mexico Border

Colonias, which are unincorporated border settlements in the United States, have emerged in rural areas without the governance and services normally provided by local government. Colonia residents live in poverty and lack adequate health care, potable water, and sanitation systems. These conditions create substantial health risks for colonias and surrounding communities. By 2001, more than 1,400 colonias were identified in Texas. Cooperation with the U.S. Department of Housing and Urban Development, Offices of the Texas Attorney General, Secretary of State, and the Texas Water Development Board has allowed the U.S. Geological Survey (USGS) to improve colonia Geographic Information System (GIS) boundaries and develop the Colonia Health, Infrastructure, and Platting Status tool (CHIPS). Together, the GIS boundaries and CHIPS aid the Texas government in prioritizing the limited funds that are available for infrastructure improvement. CHIPS's report generator can be tailored to the needs of the user, providing either broad or specific output. For example, a congressman could use CHIPS to list colonias with wastewater issues in a specific county, whereas a health researcher could list all colonias without clinical access. To help cities along the United States-Mexico border manage issues related to colonias growth, CHIPS will become publicly available in an Internet-enabled GIS as part of a cooperative study between the USGS, the U.S. Department of Housing and Urban Development, and the Mexican Instituto Nacional de Estadistica Geografia e Informatica.

Open-File Report↗

Size dimorphism, molt status, and body mass variation of prairie falcons nesting in the Snake River Birds of Prey National Conservation Area

Thirty-nine bald eagles found sick or dead in 13 States during 1969 and 1970 were analyzed for pesticide residues. Residues of DDE, dieldrin, polychlorinated biphenyls (PCB's), and mercury were detected in all bald eagle carcasses; DDD residues were detected in 38; DDT, heptachlor epoxide, and dichlorobenzophenone (DCBP) were detected less frequently. Six eagles contained possible lethal levels of dieldrin in the brain, and one contained a lethal concentration of DDE (385 ppm) in the brain together with 235 ppm of PCB's. Autopsy revealed that 18 bald eagles were illegally shot; other causes of death were impact injuries, electrocution, emaciation, and infectious diseases.

Journal of Raptor Research↗