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Strategic Science for Coral Ecosystems 2007-2011

Shallow and deep coral ecosystems are being imperiled by a combination of stressors. Climate change, unsustainable fishing practices, and disease are transforming coral communities at regional to global scales. At local levels, excessive amounts of sediments, nutrients, and contaminants are also impacting the many benefits that healthy coral ecosystems provide. This Plan, Strategic Science for Coral Ecosystems, describes the information needs of resource managers and summarizes current research being conducted by U.S. Geological Survey (USGS) scientists and partners. It outlines important research actions that need to be undertaken over the next five years to achieve more accurate forecasting of future conditions and develop more effective decision-support tools to adaptively manage coral ecosystems. The overarching outcome of this Plan, if fully implemented, would be in transferring relevant knowledge to decision-makers, enabling them to better protect and sustain coral ecosystem services. These services include sources of food, essential habitat for fisheries and protected species, protection of coastlines from wave damage and erosion, recreation, and cultural values for indigenous communities. The USGS has a long history of research and monitoring experience in studying ancient and living coral communities and serving many stakeholders. The research actions in this Plan build on the USGS legacy of conducting integrated multidisciplinary science to address complex environmental issues. This Plan is responsive to Federal legislation and authorities and a variety of external and internal drivers that include the President's Ocean Action Plan, the recommendations of the Coral Reef Task Force, the information needs of Bureaus in the Department of Interior, the USGS Bureau Science Strategy (USGS 2007) and the formal plans of several USGS Programs. To achieve this Plan's desired outcomes will require increased funding and more effective coordination and collaboration among USGS managers and scientists within a national and international framework of partnerships in coral ecosystem science.

Circular

Leveraging geodetic data to reduce losses from earthquakes

Seismic hazard assessments that are based on a variety of data and the best available science, coupled with rapid synthesis of real-time information from continuous monitoring networks to guide post-earthquake response, form a solid foundation for effective earthquake loss reduction. With this in mind, the Earthquake Hazards Program (EHP) of the U.S. Geological Survey (USGS) Natural Hazards Mission Area (NHMA) engages in a variety of undertakings, both established and emergent, in order to provide high quality products that enable stakeholders to take action in advance of and in response to earthquakes. Examples include the National Seismic Hazard Model (NSHM), development of tools for improved situational awareness such as earthquake early warning (EEW) and operational earthquake forecasting (OEF), research about induced seismicity, and new efforts to advance comprehensive subduction zone science and monitoring. Geodetic observations provide unique and complementary information directly relevant to advancing many aspects of these efforts (fig. 1). EHP scientists have long leveraged geodetic data for a range of influential studies, and they continue to develop innovative observation and analysis methods that push the boundaries of the field of geodesy as applied to natural hazards research. Given the ongoing, rapid improvement in availability, variety, and precision of geodetic measurements, considering ways to fully utilize this observational resource for earthquake loss reduction is timely and essential. This report presents strategies, and the underlying scientific rationale, by which the EHP could achieve the following outcomes: The EHP is an authoritative source for the interpretation of geodetic data and its use for earthquake loss reduction throughout the United States and its territories. The USGS consistently provides timely, high quality geodetic data to stakeholders. Significant earthquakes are better characterized by incorporating geodetic data into USGS event response products and by expanded use of geodetic imaging data to assess fault rupture and source parameters. Uncertainties in the NSHM, and in regional earthquake models, are reduced by fully incorporating geodetic data into earthquake probability calculations. Geodetic networks and data are integrated into the operations and earthquake information products of the Advanced National Seismic System (ANSS). Earthquake early warnings are improved by more rapidly assessing ground displacement and the dynamic faulting process for the largest earthquakes using real-time geodetic data. Methodology for probabilistic earthquake forecasting is refined by including geodetic data when calculating evolving moment release during aftershock sequences and by better understanding the implications of transient deformation for earthquake likelihood. A geodesy program that encompasses a balanced mix of activities to sustain missioncritical capabilities, grows new competencies through the continuum of fundamental to applied research, and ensures sufficient resources for these endeavors provides a foundation by which the EHP can be a leader in the application of geodesy to earthquake science. With this in mind the following objectives provide a framework to guide EHP efforts: Fully utilize geodetic information to improve key products, such as the NSHM and EEW, and to address new ventures like the USGS Subduction Zone Science Plan. Expand the variety, accuracy, and timeliness of post-earthquake information products, such as PAGER (Prompt Assessment of Global Earthquakes for Response), through incorporation of geodetic observations. Determine if geodetic measurements of transient deformation can significantly improve estimates of earthquake probability. Maintain an observational strategy aligned with the target outcomes of this document that includes continuous monitoring, recording of ephemeral observations, focused data collection for use in research, and application-driven data processing and analysis systems. Collaborate on research, development, and operation of affordable, high-precision seafloor geodetic methods that improve earthquake forecasting and event response. Advance computational techniques and instrumentation to enable use of strategies like repeat-pass imagery and low-cost geodetic sensors for earthquake response, monitoring, and research. Engage stakeholders and collaborate with partner institutions to foster operational and research objectives and to safeguard the continued health of geodetic infrastructure upon which we mutually depend. Maintaining a vibrant internal research program provides the foundation by which the EHP can remain an effective and trusted source for earthquake science. Exploiting abundant new data sources, evaluating and assimilating the latest science, and pursuing novel avenues of investigation are means to fulfilling the EHP’s core responsibilities and realizing the important scientific advances envisioned by its scientists. Central to the success of such a research program is engaging personnel with a breadth of competencies and a willingness and ability to adapt these to the program’s evolving priorities, enabling current staff to expand their skills and responsibilities, and planning holistically to meet shared workforce needs. In parallel, collaboration with external partners to support scientific investigations that complement ongoing internal research enables the EHP to strengthen earthquake information products by incorporating alternative perspectives and approaches and to study topics and geographic regions that cannot be adequately covered internally. With commensurate support from technical staff who possess diverse skills, including engineering, information technology, and proficiency in quantitative analysis combined with basic geophysical knowledge, the EHP can achieve the geodetic outcomes identified in this document.

Open-File Report

Fine-resolution land cover mapping over large and mountainous areas for Lāna‘i, Hawaii using posterior probabilities, and expert knowledge

The task of accurately mapping species-specific vegetation cover in remote and topographically complex regions like those found in Hawaiʻi presents unique challenges. This study leverages a machine learning approach to accurately classify vegetation into fine species-specific classes across the island of Lāna‘i, Hawaii, offering a novel methodology for tackling such challenges. Utilizing high-resolution WordView-2 satellite imagery, a neural network classifier and a custom lidar-based geometric correction, we introduced two new approaches to refine our high-resolution land cover classifications. This included the implementation of prior-based adjustments to class posterior probabilities to enhance land cover classification accuracy. Moreover, we developed mixed hierarchical classification maps that use class posterior probabilities to identify, at the pixel level, the finest land cover class that meets a user-defined confidence threshold. The resulting high-resolution land cover map for Lāna‘i captures the rich diversity and distribution of native and invasive plant species with high overall accuracy, generally exceeding 95%, based on independent ground control data. The capacity to produce wall-to-wall species-level vegetation maps provides a new window into monitoring vegetation dynamics on Lāna‘i and similarly remote and topographically complex regions, and contributes to our broader understanding of ecosystem responses to invasive species, climatic changes, and land management practices such as erosion and sediment control planning. Our approach offers a blueprint for similar efforts in other complex and remote ecosystems.

Hawaii

National earthquake information center strategic plan, 2019–23

Executive Summary Damaging earthquakes occur regularly around the world; since the turn of the 20th century, hundreds of earthquakes have caused significant loss of life and (or) millions of dollars or more in economic losses. While most of these did not directly affect the United States and its Territories, by studying worldwide seismicity we can better understand how to mitigate the effects of earthquakes when they do occur within U.S. borders. Within the U.S. Government, this mandate falls on the U.S. Geological Survey (USGS) National Earthquake Information Center (NEIC), which has the statutory responsibility for monitoring and reporting on earthquakes domestically and globally. The NEIC has been operating since 1966, and throughout its history has been recognized as a world leader for earthquake information. For much of this time, NEIC has been cooperating with a number of regional seismic networks (RSNs) which operate in areas of heightened seismicity in the United States. In 2000, the Advanced National Seismic System (ANSS) was founded as a cooperative umbrella for earthquake-related data collection, analysis, and dissemination in the United States, thereby promoting advanced interoperability between the NEIC and RSN partners. The NEIC also cooperates and coordinates with dozens of global seismic networks. At present (2019), NEIC acquires real-time waveform data from more than 2,000 seismic stations worldwide, contributed from more than 130 seismic networks. Since 2006, the NEIC has operated on a 24-hour, 7-days per week (24/7) basis, and reports on about 30,000 earthquakes per year. Soon after the occurrence of a significant global earthquake, notifications are issued to government representatives, aid agencies, the press, and members of the general public by the Earthquake Notification Service (ENS), electronic feeds, and through the USGS Earthquake Hazards Program (EHP) website. Event-specific web pages provide detailed source parameter information outlining the location and magnitude of the earthquake, including more detailed source characteristics like moment magnitude and focal mechanisms and finite fault solutions. Further, NEIC produces a suite of real-time situational awareness products, including ShakeMap, ShakeCast, Did-You-Feel-It? (DYFI?), and Prompt Assessment of Global Earthquakes for Response (PAGER), to characterize the shaking resulting from the earthquake and the impact it is likely to have on nearby populations and infrastructure. All of these products are ultimately archived in the ANSS Comprehensive Catalog (ComCat), hosted and served by the NEIC. The NEIC also pursues an active research program to improve its ability to characterize earthquakes and understand their hazards. These efforts are all aimed at mitigating the risks of earthquakes to humankind. To maintain its prominent position in earthquake monitoring, the NEIC must continue to evolve, concurrently improving its operations and 24/7 robustness, streamlining services and infrastructure, and keeping pace with research and innovation in the field of seismology. This document outlines how the NEIC might best achieve such goals, by describing specific avenues and opportunities for development in the next five years (2019–23). Several key areas of operational and research focus are identified in this plan as being of the highest importance. First, NEIC must finalize improvements to its regional monitoring capabilities, including the implementation of a variety of improved earthquake detection and association algorithms. One of the most exciting avenues of recent research expansion in earthquake monitoring has involved the use of machine learning; NEIC must explore the benefits of machine learning for improved earthquake detection and source characterization. NEIC also needs to address issues related to the timeliness of earthquake information, exploring the benefits of distributing information as it becomes available, rather than when certain quality criteria are met. To that end, the incorporation of real-time Global Positioning System (GPS) data into the NEIC operational workflow will help improve the speed and accuracy of information for moderate-to-large earthquakes. Finally, NEIC should explore how to further expand and improve the quality and content of the products served during earthquake response efforts, including the generation of new earthquake sequence-specific products, adding an evolutionary component to earthquake information, and continued improvements to earthquake impact products.

Circular

The scope and severity of white-nose syndrome on hibernating bats in North America

Assessing the scope and severity of threats is necessary for evaluating impacts on populations to inform conservation planning. Quantitative threat assessment often requires monitoring programs that provide reliable data over relevant spatial and temporal scales, yet such programs can be difficult to justify until there is an apparent stressor. Leveraging efforts of wildlife management agencies to record winter counts of hibernating bats, we collated data for 5 species from over 200 sites across 27 U.S. states and 2 Canadian provinces from 1995 to 2018 to determine the impact of white-nose syndrome (WNS), a deadly disease of hibernating bats. We estimated declines of winter counts of bat colonies at sites where the invasive fungus that causes WNS ( Pseudogymnoascus destructans ) had been detected to assess the threat impact of WNS. Three species undergoing species status assessment by the U.S. Fish and Wildlife Service ( Myotis septentrionalis , Myotis lucifugus , and Perimyotis subflavus ) declined by more than 90%, which warrants classifying the severity of the WNS threat as extreme based on criteria used by NatureServe. The scope of the WNS threat as defined by NatureServe criteria was large (36% of Myotis lucifugus range) to pervasive (79% of Myotis septentrionalis range) for these species. Declines for 2 other species ( Myotis sodalis and Eptesicus fuscus ) were less severe but still qualified as moderate to serious based on NatureServe criteria. Data-sharing across jurisdictions provided a comprehensive evaluation of scope and severity of the threat of WNS and indicated regional differences that can inform response efforts at international, national, and state or provincial jurisdictions. We assessed the threat impact of an emerging infectious disease by uniting monitoring efforts across jurisdictional boundaries and demonstrated the importance of coordinated monitoring programs, such as the North American Bat Monitoring Program (NABat), for data-driven conservation assessments and planning.

Conservation Biology

Reconnaissance of the ground-water resources of Kings and Queens counties, New York

Western Long Island 's ground-water resources are being considered for redevelopment as a supplemental source of public water supply. The ground-water reservoir in Kings and Queens Counties had supplied an average of more than 120 million gallons per day for industrial and public water supply from 1904 to 1947. However, deterioration of groundwater quality from induced encroachment of salty ground-water caused the total cessation of pumping for public supply in Kings County in 1947 and in western Queens County in 1974. This investigation was designed to make a preliminary evaluation of the present groundwater quality and to review hydrologic information pertinent to the formulation of an appropriate development plan. Detailed hydrogeologic mapping was done to define the geometry of the ground-water system. The history of ground-water development and the consequent responses of ground-water levels and quantity were summarized. A well network was established to monitor ground-water levels and ground-water quality in Kings and Queens Counties. The distribution of chloride and nitrate in ground-water was used to identify contamination from salt-water intrusion and surface sources. A limited source of potable ground-water is available in the Magothy-Jameco and Lloyd aquifers; however, an accurate estimate of the quantity of water available or a draft rate suitable for maintaining a useable ground-water quality is undetermined. (USGS)

Open-File Report

Modeling wetland plant community response to assess water-level regulation scenarios in the Lake Ontario-St. Lawrence River basin

The International Joint Commission has recently completed a five-year study (2000-2005) to review the operation of structures controlling the flows and levels of the Lake Ontario - St. Lawrence River system. In addition to addressing the multitude of stakeholder interests, the regulation plan review also considers environmental sustainability and integrity of wetlands and various ecosystem components. The present paper outlines the general approach, scientific methodology and applied management considerations of studies quantifying the relationships between hydrology and wetland plant assemblages (% occurrence, surface area) in Lake Ontario and the Upper and Lower St. Lawrence River. Although similar study designs were used across the study region, different methodologies were required that were specifically adapted to suit the important regional differences between the lake and river systems, range in water-level variations, and confounding factors (geomorphic types, exposure, sediment characteristics, downstream gradient of water quality, origin of water masses in the Lower River). Performance indicators (metrics), such as total area of wetland in meadow marsh vegetation type, that link wetland response to water levels will be used to assess the effects of different regulation plans under current and future (climate change) water-supply scenarios.

Environmental Monitoring and Assessment

A science plan for a comprehensive assessment of water supply in the region underlain by fractured rock in Maryland

The fractured rock region of Maryland, which includes land areas north and west of the Interstate 95 corridor, is the source of water supply for approximately 4.4 million Marylanders, or approximately 76 percent of the State's population. Whereas hundreds of thousands of residents rely on wells (both domestic and community), millions rely on surface-water sources. In this region, land use, geology, topography, water withdrawals, impoundments, and other factors affect water-flow characteristics. The unconfined groundwater systems are closely interconnected with rivers and streams, and are affected by seasonal and climatic variations. During droughts, groundwater levels drop, thereby decreasing well yields, and in some cases, wells have gone dry. Low ground-water levels contribute to reduced streamflows, which in turn, can lead to reduced habitat for aquatic life. Increased demand, over-allocation, population growth, and climate change can affect the future sustainability of water supplies in the region of Maryland underlain by fractured rock. In response to recommendations of the 2008 Advisory Committee on the Management and Protection of the State's Water Resources report, the Maryland Department of the Environment's Water Supply Program, the Maryland Geological Survey, the Maryland Department of Natural Resources, Monitoring and Non-Tidal Assessment (MANTA) Division, and the U.S. Geological Survey have developed a science plan for a comprehensive assessment that will provide new scientific information, new data analysis, and new tools for the State to better manage water resources in the fractured rock region of Maryland. The science plan lays out five goals for the comprehensive assessment: (1) develop tools for the improved management and investigation of groundwater and surface-water resources; (2) characterize factors affecting reliable yields of individual groundwater and surface-water supplies; (3) investigate impacts on nearby water withdrawal users caused by groundwater and surface-water withdrawals; (4) assess the role of streamflow and water withdrawals on the ecological integrity of streams; and (5) improve understanding of the distribution of water-quality conditions in fractured rock aquifers. To accomplish these goals, accurate data collection, review, and analysis are needed, including the study of "Research Watersheds" that can provide detailed information about the potential effects that climate change and water withdrawals may have on groundwater, streamflow, and aquatic life. The assessment planning started in 2009 and is being conducted with close interagency coordination. A Fractured Rock Aquifer Information System is currently (2012) undergoing initial development. Other major tasks that will be performed include the development of work plans for each science goal, the estimation of daily streamflow at ungaged streams, and the design and implementation of Research Watersheds. Finally, scenarios will be modeled to evaluate current water allocation permitting methodologies, investigate effects on nearby water withdrawal users caused by groundwater and surface-water withdrawals, and assess the potential impacts of climate change on water resources. Desktop and Web-based tools will be developed in order to meet the diverse research needs of the assessment. These tools, including the Fractured Rock Aquifer Information System will be continuously improved during the assessment to store relevant groundwater and surface-water data in spatially referenced databases, estimate streamflows, locate higher-yielding wells, estimate the impacts of withdrawals on nearby users, and assess the cumulative impacts of withdrawals on the aquatic resource. Tools will be developed to serve the needs of many audiences, including water resource managers, water suppliers, planners, policymakers, and other scientific investigators.

Maryl

Global Data Toolset (GDT)

According to the United Nations Environment Programme World Conservation Monitoring Centre (UNEP-WCMC) approximately 60 percent of the data contained in the World Database on Protected Areas (WDPA) has missing or incomplete boundary information. As a result, global analyses based on the WDPA can be inaccurate, and professionals responsible for natural resource planning and priority setting must rely on incomplete geospatial data sets. To begin to address this problem the World Data Center for Biodiversity and Ecology, in cooperation with the U. S. Geological Survey (USGS) Rocky Mountain Geographic Science Center (RMGSC), the National Biological Information Infrastructure (NBII), the Global Earth Observation System, and the Inter-American Biodiversity Information Network (IABIN) sponsored a Protected Area (PA) workshop in Asuncion, Paraguay, in November 2007. The primary goal of this workshop was to train representatives from eight South American countries on the use of the Global Data Toolset (GDT) for reviewing and editing PA data. Use of the GDT will allow PA experts to compare their national data to other data sets, including non-governmental organization (NGO) and WCMC data, in order to highlight inaccuracies or gaps in the data, and then to apply any needed edits, especially in the delineation of the PA boundaries. In addition, familiarizing the participants with the web-enabled GDT will allow them to maintain and improve their data after the workshop. Once data edits have been completed the GDT will also allow the country authorities to perform any required review and validation processing. Once validated, the data can be used to update the global WDPA and IABIN databases, which will enhance analysis on global and regional levels.

Fact Sheet

Final project peport for “Mapping riparian vegetation response to climate change on the San Carlos Apache Reservation and Upper Gila River watershed to inform restoration priorities: 1935 to present – Phase 2: Focus on tamarisk vegetation”

Riparian ecosystems play a critical role in supporting wildlife habitats, maintaining water quality, and sustaining ecological resilience in arid landscapes. In the Upper Gila River level-4 Hydrologic Unit Code (HUC-4; Identification Number – 1504) watershed of Arizona and New Mexico, and across areas of the San Carlos Apache Tribe of the San Carlos Apache Reservation (hereafter, Tribe/Tribal – entity; or Reservation - place), riparian ecosystems have been substantially altered by the widespread expansion of tamarisk ( Tamarix spp.), an invasive and non-native riparian species. Tamarisk has high water use and increased flammability, making it a growing concern as droughts intensify across the southwestern United States (U.S.). Recent research indicates that tamarisk is increasingly stressed under prolonged drought conditions, which can elevate wildfire risk and further degrade riparian habitat. In response, the U.S. Geological Survey (USGS) Western Geographic Science Center, in collaboration with the Tribe, developed remote sensing–based tools to map riparian vegetation composition and monitor vegetation condition over time. These tools enable accurate identification of tamarisk extent, detection of vegetation stress, and comparison with native species such as cottonwood and willow. This information directly supports restoration and management actions, including targeted tamarisk removal, protection of endangered species habitat, and prioritization of areas for native vegetation recovery. The tools also provide insight into how riparian vegetation responds to changing climate and hydrologic conditions, strengthening long-term planning for riparian forest management. Findings from this work demonstrate that riparian vegetation responses vary across river systems, indicating differences in plant composition and hydro-climatic conditions. Tamarisk on both the Gila and San Carlos Rivers generally exhibit greater declines in greenness in response to higher temperature as well as lower precipitation and river flow, while cottonwood ( Populus fremontii ) and willow (Salix spp.) are particularly sensitive to changes in discharge along the San Carlos River and respond more directly to both high and low flows, with more moderate responses to precipitation and temperature. By providing actionable, science-based information, this research supports climate adaptation planning, wildfire risk reduction, and improved riparian ecosystem health, with benefits that extend beyond the Reservation to regional water and wildlife conservation efforts.

Arizona, New Mexico

Amphibian population responses to mitigation: Relative importance of wetland age and design

Wetland creation is a common practice to mitigate for the loss of natural wetlands. However, there is still uncertainty about how effectively created wetlands replace habitat provided by natural wetlands. This uncertainty is due in part because post-construction monitoring of biological communities, and vertebrates especially, is rare and typically short-term (<5 years). We estimated occupancy of 4 amphibian species in 8 created mitigation wetlands, 7 impacted wetlands, and 7 reference wetlands in the Greater Yellowstone Ecosystem in Wyoming, USA. Mitigation wetlands were created to replace wetland habitat that was lost during road construction and ranged in age from 1 to 10 years when sampled. Impacted wetlands were natural wetlands partially filled by road construction and were adjacent to a highway. We sampled for amphibian larvae during 6 summers from 2013 to 2020 and used multi-species occupancy models that estimated detection and occupancy of each of 4 amphibian species to determine how amphibian responses changed over time, especially in mitigation wetlands. Occupancy did not differ between impacted and reference wetlands for any of the 4 amphibian species. Western Toads ( Anaxyrus boreas ) were most common (although briefly) in created wetlands, and occupancy of Columbia Spotted Frogs ( Rana luteiventris ), Western Tiger Salamanders ( Ambystoma mavortium ), and Boreal Chorus Frogs ( Pseudacris maculata ) was lower in created wetlands than in impacted or reference wetlands. Individual wetland area was positively associated with occupancy for all 4 species and wetland vegetation cover was positively associated with Boreal Chorus Frog and Columbia Spotted Frog occupancy; these results emphasize the importance of design characteristics when planning mitigation wetlands. The link between wetland age and occupancy was complex and included threshold and quadratic relationships for three of the four species, but only Boreal Chorus Frog occupancy was still increasing slowly at the end of our study. Our results indicate created wetlands did not attain the suitability of impacted and natural wetlands for local amphibians, even several years after construction. The complex relationships between wetland age and species-specific occupancy illustrate the importance of long-term monitoring in describing population responses to the construction of wetlands as mitigation for wetland loss.

Ecological Indicators

Development of a pan-Arctic monitoring plan for polar bears: Background paper

Polar bears (Ursus maritimus), by their very nature, and the extreme, remote environment in which they live, are inherently difficult to study and monitor. Monitoring polar bear populations is both arduous and costly and, to be effective, must be a long-term commitment. There are few jurisdictional governments and management boards with a mandate for polar bear research and management, and many have limited resources. Although population monitoring of polar bears has been a focus to some degree within most jurisdictions around the Arctic, of the 19 subpopulations recognised by the IUCN/Species Survival Commission Polar Bear Specialist Group (PBSG), adequate scientific trend data exist for only three of the subpopulations, fair trend data for five and poor or no trend data for the remaining 11 subpopulations (PBSG 2010a). There are especially critical knowledge gaps for the subpopulations in East Greenland, in the Russian Kara and Laptev seas, and in the Chukchi Sea, which is shared between Russia and the United States. The range covered by these subpopulations represents a third of the total area (approx. 23 million km2) of polar bears’ current range, and more than half if the Arctic Basin is included. If we use popular terms, we know close to nothing about polar bears in this portion of their range. As summer sea-ice extent, and to a lesser degree, spring-time extent, continues to retreat, outpacing model forecasts (Stroeve et al. 2007, Pedersen et al. 2009), polar bears face the challenge of adapting to rapidly changing habitats. There is a need to use current and synthesised information across the Arctic, and to develop new methods that will facilitate monitoring to generate new knowledge at a pan-Arctic scale. The circumpolar dimension can be lost when efforts are channelled into regional monitoring. Developing and implementing a plan that harmonises local, regional and global efforts will increase our power to detect and understand important trends for polar bears, with particular emphasis on how climate warming may differentially affect populations and habitats. Current knowledge is inadequate for a comprehensive understanding of the present and future impact of climate warming and its interaction with other stressors. The cumulative effects are unknown (Laidre et al. 2008). An integrated pan-Arctic research and monitoring plan will improve the ability to detect future trends, identify the most vulnerable subpopulations and guide effective conservation. There is a need to direct attention and resources where data are deficient to understand the mechanisms that drive trends, and to facilitate more effective and timely conservation response.

Report

Yellowstone grizzly bear investigations: Annual report of the Interagency Grizzly Bear Study Team, 2001

The contents of this Annual Report summarize results of monitoring and research from the 2001 field season. The report also contains a summary of nuisance grizzly bear ( Ursus arctos horribilis ) management actions. In addition to our normal monitoring, we completed an array of studies addressing the potential impacts of winter recreation on denning grizzly bears. This research was in response to a lawsuit filed against the Gallatin National Forest and subsequent need to develop a biological assessment addressing effects of snowmobile use on grizzly bears (Chemy 2001). Research results were also used by the National Park Service for a biological assessment and winter use plan (U.S. Department of the Interior 2001). The Interagency Grizzly Bear Study Team (IGBST) was able to use existing data collected from collared bears to address several issues and data needs for both agencies. Denning chronology (Haroldson et al. 2002), denning areas (Podruzny et al. 2002), and grizzly distribution (Schwartz et al. 2002) were all addressed. Information from these studies was presented at the International Association for Bear Research and Management (IBA) in Jackson Hole, Wyoming in 2001, and all 3 manuscripts have been officially accepted for publication in the journal Ursus . Abstracts are attached to this report (Appendices A, B. and C). Additionally, members of the study team participated in a workshop held by the National Park Service to develop monitoring protocols addressing the impacts of snowmobiles on wildlife (Graves and Reams 2001). The study team has also been working on issues associated with counts of unduplicated females with cubs-of-the-year (COY). These counts are used to establisha minimum population size, which is then used to establish mortality thresholds for the Recovery Plan (U.S. Fish and Wildlife Service [USFWS) 1993). Efforts by the Study Team to calculate more statistically sound estimates of population size have been underway for sometime. Eberhardt and Knight (1996) applied a Peterson-type capturemark-recapture estimator to unduplicated counts, and Boyce et al. (1999) recommended a maximum likelihood method. These methods assumed equal sightability of families, which was unrealistic for the Yellowstone population. Consequently, Boyce et al. (2001) recommended using a negative binomial distribution but found that they obtained reasonable results only when the coefficient of variation among sightings was assumed to be constant overtime. This assumption is also difficult to justify. Recent work by the study team (Keating et al. 2002) evaluated the application of 7 nonparametric estimators to assess their performance in determining the number of females with COY in a given year. This work identified 2 estimators that performed well using Monte Carlo simulations over a range of sampling conditions deemed plausible for the Yellowstone population: Chao's estimator (Chao 1984) and the sample coverage estimator (Chao and Lee 1992, Lee and Chao 1994). This work was presented at the IBA meeting in Jackson and the manuscript has been accepted in the journal Ursus . An abstract of this work is attached to this annual report (Appendix D). We are currently refining the application of these techniques to expand the predicted number of females with COY into a total population estimate. We anticipate completion of that work in 2002 or 2003.

Idaho, Montana, Wyoming

Seismic monitoring during crises at the NEIC in support of the ANSS

Over the past two decades, the U.S. Geological Survey (USGS) National Earthquake Information Center (NEIC) has overcome many operational challenges. These range from minor disruptions, such as power outages, to significant operational changes, including system reconfiguration to handle unique earthquake sequences and the need to handle distributed work during a pandemic. Our ability to overcome crises is built on the development and implementation of a continuity of operations plan, well‐designed infrastructure, adaptive software systems, experienced staff, and extensive collaboration. The NEIC does not operate in a vacuum but benefits from contributions of United States and international seismic networks. Similarly, the overall resilience of earthquake monitoring in the United States and around the globe benefits from the NEIC’s role as the national center for the Advanced National Seismic System (ANSS). Here, we highlight significant adaptations the NEIC has made in the face of crises. We discuss the COVID‐19 pandemic, which represents the most significant operational crisis to impact the NEIC. The NEIC has maintained continuous operations during the ongoing COVID‐19 pandemic by shifting from a fully onsite operations center to a distributed hybrid of onsite and telework staffing. We then discuss cases in which the NEIC has supported regional monitoring in the face of significant crises. In 2018, the NEIC assisted the Hawaiian Volcano Observatory with the Kīlauea volcano eruption by responding to large events, implementing contingency monitoring procedures, and calculating moment magnitudes for the low‐frequency caldera collapses. Impacts of a crisis extend beyond the immediate response and often require a significant postevent assessment and a rebuilding phase. After the 2017 Hurricane Maria, the NEIC, the USGS National Strong‐Motion Program, and the USGS Albuquerque Seismological Laboratory worked with the Puerto Rico Seismic Network and the Puerto Rico Strong‐Motion program to assess, plan, and implement upgrades at sites that experienced storm damage.

Seismological Research Letters

Landsat 9

Landsat 9 is a partnership between the National Aeronautics and Space Administration and the U.S. Geological Survey that will continue the Landsat program’s critical role of repeat global observations for monitoring, understanding, and managing Earth’s natural resources. Since 1972, Landsat data have provided a unique resource for those who work in agriculture, geology, forestry, regional planning, education, mapping, and global-change research. Landsat images have also proved invaluable to the International Charter: Space and Major Disasters, supporting emergency response and disaster relief to save lives. With the addition of Landsat 9, the Landsat program’s record of land imaging will be extended to over half a century.

Fact Sheet

How and why is the timing and occurrence of seasonal migrants in the Gulf of Maine changing due to climate?

Plants and animals undergo certain recurring life-cycle events, such as migrations between summer and winter habitats or the annual blooming of plants. Known as phenology, the timing of these events is very sensitive to changes in climate (and changes in one species’ phenology can impact entire food webs and ecosystems). Shifts in phenology have been described as a “fingerprint” of the temporal and spatial responses of wildlife to climate change impacts. Thus, phenology provides one of the strongest indicators of the adaptive capacity of organisms (or the ability of organisms to cope with future environmental conditions). In this study, researchers are exploring how the timing and occurrence of a number of highly migratory marine animals is changing due to a series of climatic and ecological shifts. First, using existing long-term historical data series, they will determine the direction and magnitude of how migration, abundance, or other phenological factors have changed for marine mammals, sea turtles, and fishes that migrate into the Gulf of Maine on a seasonal basis. Because marine animals are inherently difficult to detect, the team will apply dynamic occupancy models to evaluate seasonal migration patterns and habitat use across multiple habitats in the Gulf of Maine region. The project team will also synthesize regional information on a key, ecologically-important prey fish, sandlance, whose timing and abundance is a strong predictor of the occurrence and behavior of predator species targeted in this study as well as a range of other regional fish and wildlife of conservation and management concern. Results from this component of the project will identify coastal fish and wildlife species that are relatively more or less able to adapt and thus potentially vulnerable to climate change; determine the likely primary drivers of those changes; and identify data gaps and future monitoring needs. Ultimately, this information will be available and useful for regional coastal management and adaptation decisions that will allow managers to effectively plan for the future. In a second component of the project, researchers will focus specifically on changes in migration patterns of the endangered North Atlantic right whale. While shifts in the distribution and time of recurring life events are adaptive responses that may help species cope with climate impacts, they can also lead to changes in how species interact with humans. The North Atlantic right whale is one of the most endangered whale species on the planet. In the North Atlantic Ocean, ship strikes and entanglements with commercial fishing gear represent fatal threats to right whales. Recent reports suggest that North Atlantic right whale migration patterns have changed. Many researchers posit that shifts in migration are responsible for recent increases in the overlap between right whales and human activities, especially fishing. To help understand how changes in right whale movements and behaviors may overlap with ship traffic, and thus put the animals at risk of encountering vessels, we will combine right whale habitat models with ship traffic maps. The end result will be a set of maps identifying risk levels.

Gulf of Maine

A reassessment of Chao2 estimates for population monitoring of grizzly bears in the Greater Yellowstone Ecosystem

The Yellowstone Ecosystem Subcommittee (YES) asked the Interagency Grizzly Bear Study Team (IGBST) to re-assess a technique used in annual population estimation and trend monitoring of grizzly bears in the Greater Yellowstone Ecosystem (GYE). This technique is referred to as the Chao2 approach and estimates the number of females with cubs-of-the-year (hereafter, females with cubs) and, in association with other demographic data, is used by the IGBST to produce annual population estimates. Females with cubs are an easily recognizable population segment, and trends for this reproductive segment of the population are assumed to be representative of trend for the entire population. The overarching objective of the analyses presented in this report was to provide a more accurate representation of the GYE grizzly bear population using the current methodologies in place. Specifically, we addressed two limitations of the current Chao2 approach: 1) underestimation bias associated with a distance criterion used to differentiate annual sightings of females with cubs into unique individuals and 2) limitations of the model-averaging approach to effectively distinguish among potential future population trajectories (decline, stability, and growth). The first issue addressed in this report is the underestimation bias associated with the rule set that Knight et al. (1995) developed to differentiate sightings of females with cubs into unique individuals (i.e., unique family groups). The rule set was originally designed to be conservative by reducing the risk of identifying more females with cubs than actually existed, primarily through use of a distance criterion of 30 km to separate sightings of unique females. This approach resulted in an underestimation bias, and previous research demonstrated that this bias increases with increasing number of females with cubs. Using location data from radio-marked females with cubs, we evaluated alternative distance criteria by simulating scenarios with varying numbers of true females with cubs and sightings. Findings from these analyses demonstrate that bias in estimates of females with cubs can be substantially reduced by changing the 30-km distance criterion in the rule set to 16 km, which produced relatively unbiased estimates. Findings also indicate, however, the importance of adaptability with regard to the distance criteria because of the complex relationships and biases among the various parameters involved in estimation of unique females with cubs. The total number of annual sightings and the true number of females with cubs play particularly important roles. Whereas these analyses remind us that there is no perfect approach to estimating the number of females with cubs from sightings under various scenarios, they provide us with new tools to determine when and how to adapt the monitoring program. The second issue we were tasked to investigate was the potential for improvement of the technique referred to as model-averaging, which serves to smooth relatively high variation in annual estimates. This technique was chosen by YES as the basis for monitoring the Yellowstone grizzly bear population, as described in the 2016 Conservation Strategy. This choice was made in part because the technique has been well documented and population estimates derived from counts of females with cubs are conservative. Using simulations of population trends, we demonstrate why the model-averaging technique currently used cannot distinguish between plausible future trend scenarios. As a suitable alternative to model averaging, we propose the use of generalized additive models (GAMs). Using a suite of simulated trend dynamics relevant to management, we demonstrate GAM performance for tracking trends in females with cubs within the context of the annual monitoring program. We demonstrate the ability to not only document directional changes in population trend but also patterns of stabilization or resiliency after such changes. Furthermore, the proposed monitoring framework provides objective measures useful for early detection of directional changes in trend. The new framework is flexible, allowing retrospective analysis of Chao2-based estimates and future applications to time series of other population metrics, such as vital rates. The aforementioned updates provide us with new tools to determine when and how to adapt the monitoring program. Within the context of current monitoring protocols and effort, and considering the full suite of simulations presented in this report and previous studies, the IGBST plans to incorporate the following changes to the population monitoring protocol: 1) modify the distance criterion, starting with 16 km under current sampling conditions and 2) revise the population monitoring framework using GAMs as the basis for smoothing of annual estimates and detecting trends and changes in trend. Implementation of the 16-km distance criterion combined with use of GAM techniques would affect some of the population metrics (e.g., annual population size and uncertainty, population trend, mortality rates) used to inform management responses. A primary consideration is that the 16-km distance criterion results in total population estimates derived from the Chao2 estimates that are greater than those we have reported in the past. This increase is due to a change in the implementation of the technique and more accurately represents the number of females with cubs in the GYE grizzly bear population. Additionally, interpretation of retrospective trend patterns may change due to the combination of a different distance criterion and enhanced trend monitoring based on the GAM approach we present here. Implementation will require relatively minor changes in the monitoring protocols described in Appendices B and C of the 2016 Conservation Strategy. Finally, we note that the IGBST has ongoing investigations into the merits of an Integrated Population Model (IPM), for which annual Chao2-based estimates are important input data. The IGBST plans to continue those investigations using the 16-km distance criterion to derive Chao2 estimates.

Idaho, Montana, Wyoming

USGS Integration of New Science and Technology, Appendix A

This product summarizes the USGS plans for integration of new science and technology into Asian Carp control efforts for 2017. This includes the 1) implementation and evaluation of new tactics and behavioral information for monitoring, surveillance, control and containment; 2) understanding behavior and reproduction of Asian carp in established and emerging populations to inform deterrent deployment, rapid response, and removal efforts; and 3) development and evaluation of databases, decision support tools and performance measures.

Report