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The coral reef of South Moloka'i, Hawai'i— Portrait of a sediment-threatened fringing reef

Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years. The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been. The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts. In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a remarkably integrated approach to the reefs of Moloka‘i, combining geology, oceanography, and biology to provide an in-depth understanding of the processes that have made these reefs grow and that now limit them. They have joined old fashioned natural history of marine animals and plants with study of the geological evolution of the island, hydrology, meteorology, and land-use history, to an arsenal of new methods of remote sensing, including aerial photography, laser ranging, infrared thermal mapping, seismic reflection, in-situ instrumentation to measure chemical parameters of water quality, and direct measurements of the physical driving forces affecting them—such as wave energy, currents, sedimentation, and sediment transport. They provide a level of documentation and insight that has never been available for any reef before. A remarkable feature of this book is that it is aimed at the people of Moloka‘i to inform them of what is happening to their reef and what they might do to preserve their vital resources. The scientific data and interpretations are expressed in unusually clear and comprehensible language, free of the professional jargon that makes most technical publications impenetrable to the public that most needs to know about them, yet without loss of scientific rigor. Here readers will see clearly explained the whole path of soil loss, from the impacts of wild pigs and goats at higher elevations, deforestation of the hills for cattle pasture at lower levels, and denudation of low lands for cash crops. The resulting biological impoverishment has bared the soils, which wash away in flash storms, smothering the inshore reefs, whose growth was already limited because they had grown right up to sea level. The data in this book show that the mud doesn’t get far if it is washed into the sea during a big storm with heavy waves. Afterwards this mud keeps getting stirred up by every succeeding storm, spreading and affecting corals over wider areas until it is finally washed out of the system—and that only happens if there is no more new mud washing onto the reef. I saw this myself a few years ago in Pila‘a Bay on Kaua‘i, where a bulldozed hillside of abandoned sugar cane fields had slumped right on top of a coral reef following exceptional rains. Years later, the algae species were zoned in a way that clearly mapped the distribution of nutrients washed into the bay, most likely from fertilizers bound to the eroded soils. That pattern closely mimics, on a small scale, that shown in Moloka‘i in this volume, where the inner reef is covered with algae, zoned by species in a way that points to land-based sources of nutrients, while the outermost reef slope is still coral dominated, and the deep algae seem to indicate deep-water nutrient upwelling. What of the future? The Hawaiian Islands have been exceptionally fortunate to be spared the worst coral heatstroke death from high temperatures, at least to date. So far, the worst global warming impacts have luckily been small in this region, and the small number of people on Moloka‘i has kept population densities, and sewage pollution, low compared to the more developed islands. Nutrients from years of sugar and pineapple fertilization, and the washing of this soil onto the reefs, show clear influences on the pattern of algae on the reef. Even at very low levels of nutrients, well below that which drives algae to smother and kill coral reefs, more algae is present. Soil erosion control is therefore the key to better management of both nutrients and turbidity on Moloka‘i reefs. To that end land management actions mentioned in this book, such as suppressing wild fires and eliminating wild goats and pigs, could be made even more effective if supplemented by active erosion control using plants whose roots bind the soil effectively in place. Through all of these efforts, Hina and the people of Moloka‘i could be happy again!

Hawaii↗

Multi-decadal impacts of grazing on soil physical and biogeochemical properties in southeast Utah

Many soils in southeastern Utah are protected from surface disturbance by biological soil crusts that stabilize soils and reduce erosion by wind and water. When these crusts are disturbed by land use, soils become susceptible to erosion. In this study, we compare a never-grazed grassland in Canyonlands National Park with two historically grazed sites with similar geologic, geomorphic, and geochemical characteristics that were grazed from the late 1800s until 1974. We show that, despite almost 30 years without livestock grazing, surface soils in the historically grazed sites have 38–43% less silt, as well as 14– 51% less total elemental soil Mg, Na, P, and Mn content relative to soils never exposed to livestock disturbances. Using magnetic measurement of soil magnetite content (a proxy for the stabilization of far-traveled eolian dust) we suggest that the differences in Mg, Na, P, and Mn are related to wind erosion of soil fine particles after the historical disturbance by livestock grazing. Historical grazing may also lead to changes in soil organic matter content including declines of 60–70% in surface soil C and N relative to the never-grazed sites. Collectively, the differences in soil C and N content and the evidence for substantial rock-derived nutrient loss to wind erosion implies that livestock grazing could have long-lasting effects on the soil fertility of native grasslands in this part of southeastern Utah. This study suggests that nutrient loss due to wind erosion of soils should be a consideration for management decisions related to the long-term sustainability of grazing operations in arid environments.

Utah↗

Small-Scale Vertical Distribution of Bacterial Biomass and Diversity in Biological Soil Crusts from Arid Lands in the Colorado Plateau

We characterized, at millimeter resolution, bacterial biomass, diversity, and vertical stratification of biological soil crusts in arid lands from the Colorado Plateau. Microscopic counts, extractable DNA, and plate counts of viable aerobic copiotrophs (VAC) revealed that the top centimeter of crusted soils contained atypically large bacterial populations, tenfold larger than those in uncrusted, deeper soils. The plate counts were not always consistent with more direct estimates of microbial biomass. Bacterial populations peaked at the immediate subsurface (1-2 mm) in light-appearing, young crusts, and at the surface (0-1 mm) in well-developed, dark crusts, which corresponds to the location of cyanobacterial populations. Bacterial abundance decreased with depth below these horizons. Spatially resolved DGGE fingerprints of Bacterial 16S rRNA genes demonstrated the presence of highly diverse natural communities, but we could detect neither trends with depth in bacterial richness or diversity, nor a difference in diversity indices between crust types. Fingerprints, however, revealed the presence of marked stratification in the structure of the microbial communities, probably a result of vertical gradients in physicochemical parameters. Sequencing and phylogenetic analyses indicated that most of the naturally occurring bacteria are novel types, with low sequence similarity (83-93%) to those available in public databases. DGGE analyses of the VAC populations indicated communities of lower diversity, with most types having sequences more than 94% similar to those in public databases. Our study indicates that soil crusts represent small-scale mantles of fertility in arid ecosystems, harboring vertically structured, little-known bacterial populations that are not well represented by standard cultivation methods.

Microbial Ecology↗

Setting limits: Using air pollution thresholds to protect and restore U.S. ecosystems

More than four decades of research provide unequivocal evidence that sulfur, nitrogen, and mercury pollution have altered, and will continue to alter, our nation's lands and waters. The emission and deposition of air pollutants harm native plants and animals, degrade water quality, affect forest productivity, and are damaging to human health. Many air quality policies limit emissions at the source but these control measures do not always consider ecosystem impacts. Air pollution thresholds at which ecological effects are observed, such as critical loads, are effective tools for assessing the impacts of air pollution on essential ecosystem services and for informing public policy. U.S. ecosystems can be more effectively protected and restored by using a combination of emissions-based approaches and science-based thresholds of ecosystem damage. Based on the results of a comprehensive review of air pollution thresholds, we conclude: ??? Ecosystem services such as air and water purification, decomposition and detoxification of waste materials, climate regulation, regeneration of soil fertility, production and biodiversity maintenance, as well as crop, timber and fish supplies are impacted by deposition of nitrogen, sulfur, mercury and other pollutants. The consequences of these changes may be difficult or impossible to reverse as impacts cascade throughout affected ecosystems. ??? The effects of too much nitrogen are common across the U.S. and include altered plant and lichen communities, enhanced growth of invasive species, eutrophication and acidification of lands and waters, and habitat deterioration for native species, including endangered species. ??? Lake, stream and soil acidification is widespread across the eastern United States. Up to 65% of lakes within sensitive areas receive acid deposition that exceeds critical loads. ??? Mercury contamination adversely affects fish in many inland and coastal waters. Fish consumption advisories for mercury exist in all 50 states and on many tribal lands. High concentrations of mercury in wildlife are also widespread and have multiple adverse effects. ??? Air quality programs, such as those stemming from the 1990 Clean Air Act Amendments, have helped decrease air pollution even as population and energy demand have increased. Yet, they do not adequately protect ecosystems from long-term damage. Moreover they do not address ammonia emissions. ??? A stronger ecosystem basis for air pollutant policies could be established through adoption of science-based thresholds. Existing monitoring programs track vital information needed to measure the response to policies, and could be expanded to include appropriate chemical and biological indicators for terrestrial and aquatic ecosystems and establishment of a national ecosystem monitoring network for mercury. The development and use of air pollution thresholds for ecosystem protection and management is increasing in the United States, yet threshold approaches remain underutilized. Ecological thresholds for air pollution, such as critical loads for nitrogen and sulfur deposition, are not currently included in the formal regulatory process for emissions controls in the United States, although they are now considered in local management decisions by the National Park Service and U.S. Forest Service. Ecological thresholds offer a scientifically sound approach to protecting and restoring U.S. ecosystems and an important tool for natural resource management and policy. ?? The Ecological Society of America.

Issues in Ecology↗

Mapping cropland waterway buffers for switchgrass development in the eastern Great Plains, USA

Switchgrass ( Panicum virgatum L.), a highly productive perennial grass, has been recommended as one potential source for cellulosic biofuel feedstocks. Previous studies indicate that planting perennial grasses (e.g., switchgrass) in high‐topographic‐relief cropland waterway buffers can improve local environmental conditions and sustainability. The main advantages of this land management practice include (i) reducing soil erosion and improving water quality because switchgrass requires less tillage, fertilizers, and pesticides; and (ii) improving regional ecosystem services (e.g., improving water infiltration, minimizing drought and flood impacts on production, and serving as carbon sinks). In this study, we mapped high‐topographic‐relief cropland waterway buffers with high switchgrass productivity potential that may be suitable for switchgrass development in the eastern Great Plains (EGP). The US Geological Survey (USGS) Compound Topographic Index map, National Land Cover Database 2011, USGS irrigation map, and a switchgrass biomass productivity map derived from a previous study were used to identify the switchgrass potential areas. Results show that about 16 342 km 2 ( c . 1.3% of the total study area) of cropland waterway buffers in the EGP are potentially suitable for switchgrass development. The total annual estimated switchgrass biomass production for these suitable areas is approximately 15 million metric tons. Results from this study provide useful information on EGP areas with good cellulosic switchgrass biomass production potential and synergistic substantial potential for improvement of ecosystem services.

Great Plains↗

Quantitative attribution of major driving forces on soil organic carbon dynamics

Soil organic carbon (SOC) storage plays a major role in the global carbon cycle and is affected by many factors including land use/management changes (e.g., biofuel production-oriented changes). However, the contributions of various factors to SOC changes are not well understood and quantified. This study was designed to investigate the impacts of changing farming practices, initial SOC levels, and biological enhancement of grain production on SOC dynamics and to attribute the relative contributions of major driving forces (CO 2 enrichment and farming practices) using a fractional factorial modeling design. The case study at a crop site in Iowa in the United States demonstrated that the traditional corn-soybean (CS) rotation could still accumulate SOC over this century (from 4.2 to 6.8 kg C/m 2 ) under the current condition; whereas the continuous-corn (CC) system might have a higher SOC sequestration potential than CS. In either case, however, residue removal could reduce the sink potential substantially. Long-term simulation results also suggested that the equilibrium SOC level may vary greatly (∼5.7 to ∼11 kg C/m 2 ) depending on cropping systems and management practices, and projected growth enhancement could make the magnitudes higher (∼7.8 to ∼13 kg C/m 2 ). Importantly, the factorial design analysis indicated that residue management had the most significant impact (contributing 49.4%) on SOC changes, followed by CO 2 Enrichment (37%), Tillage (6.2%), the combination of CO 2 Enrichment-Residue removal (5.8%), and Fertilization (1.6%). In brief, this study is valuable for understanding the major forces driving SOC dynamics of agroecosystems and informative for decision-makers when seeking the enhancement of SOC sequestration potential and sustainability of biofuel production, especially in the Corn Belt region of the United States.

Journal of Advances in Modeling Earth Systems↗

Soil phosphorus cycling in tropical soils: An ultisol and oxisol perspective

Phosphorus (P) is essential for life. It is the backbone of our DNA, provides energy for biological reactions, and is an integral component of cell membranes. As such, it is no surprise that P availability plays a strong role in regulating ecosystem structure and function (Wassen et al. 2005, Elser et al. 2007, Condit et al. 2013), and in determining our capacity to grow food for a burgeoning human population (Sharpley et al. 1997, Sims and Sharpley 2005, Lal 2009). Concerns that P supplies are insufficient to meet our species’ growing demands are on the rise (Richardson and Simpson 2011) and scientific and media outlets increasingly discuss P as an element worthy of our attention and concern (e.g., Cordell et al. 2009, Lougheed 2011, Edixhoven et al. 2013, Ulrich et al. 2013). Indeed, a number of groups are calling for the explicit stewardship of our planet’s P stocks (Schipper 2014, Withers et al. 2015). Yet a focus on P as a vital and limited resource is not new in the tropics, where an abundance of soils characterized by low P has resulted in a substantial, longstanding reliance on P inputs for tropical ecosystem function in both unmanaged and agriculture settings (Table 1, Figure 2; Sanchez 1976, Swap et al. 1992, Chadwick et al. 1999, Okin et al. 2004, Lal 2009). Indeed, there is a long history of cultivation in the tropics, where for thousands of years land management practices have included methods that effectively modify P availability for plant growth (e.g., Giardina et al. 2000, Lawrence and Schlesinger 2001, Vitousek et al. 2004, Lewis et al. 2015). Nevertheless, low soil fertility in tropical systems where fertilizer is scarce has enduringly been recognized as a major source of hunger and starvation (Sanchez and Buol 1975, Sanchez 2002, Sanchez and Swaminathan 2005).

Book chapter↗

Species-specific nitrogenase activity in lichen-dominated biological soil crusts from the Colorado Plateau, USA

Background and aim Biological soil crusts (biocrusts) play numerous crucial roles in drylands, which comprise over 40% of Earth’s terrestrial surface. Among these key contributions is the fixation of atmospheric nitrogen. Yet, relatively little is known about the N 2 fixation capabilities of different lichen species that are found in late successional biocrust communities across drylands globally. Methods In order to improve our species-specific understanding of biocrust lichen N 2 fixation, we collected biocrusts dominated by four common species of lichens – Collema spp., Gyalolechia desertorum , Psora decipiens , and Squamarina lentigera – that represent a range of lichen families and morphological types. Nitrogenase activity of the biocrust community dominated by these lichens was evaluated using the acetylene reduction assay. Additionally, biocrust community composition was assessed using the point-intercept method along transects at varied distances from exposed bedrock. Results As expected, Collema spp.-dominated biocrusts had the highest rates of nitrogenase activity, with rates up to seven times larger than those of the other three target species. Nitrogen concentrations and carbon:nitrogen ratios of lichen tissue differed among lichen species. However, when the composite biocrust profile was assessed (i.e., biocrust tissue, microbial cells, and mineral soil to a 2 cm depth) these among-species differences in total nitrogen disappeared. Community composition changed according to distance from exposed bedrock, with a higher diversity of lichens closer to the bedrock. Conclusion Multiple drivers, including climate and land use change, affect biocrust community composition and species-specific functional information, even within a group such as late successional biocrusts, could help in forecasting the potential effects of global change on N 2 fixation, and consequently, soil fertility in drylands.

Colorado Plateau↗

Sources and fate of nitrate in the Illinois River Basin, Illinois

We conducted a two-year investigation into the sources and fate of nitrate (NO3-) in the Illinois River from the Chicago area to the river's confluence with the Mississippi River. Samples from waterways in the Chicago area (Des Plaines River and the Sanitary and Ship Canal) had relatively high concentrations of nitrogen (N) species and NO3- isotopic compositions indicative of treated wastewater (TWW). Downstream of the Brandon Road Lock and Dam, NO3- in tributaries discharging to the Illinois River primarily comes from tiles draining row crops. Nitrate isotopic signatures from these tributaries as well as drain tiles were indicative of synthetic fertilizer and/or soil organic matter (SOM) at various stages of denitrification. Nitrate-N concentrations generally decreased in the Illinois River with distance from the Chicago area primarily due to dilution. The decrease in NO3-N concentrations was especially conspicuous during the summer, when there is minimal discharge from drain tiles and NO3-N concentrations in the tributaries were low. In August 2005, when conditions were very dry, NO3-N concentrations decreased from 7.4 mg/L in the Chicago area to less than 1 mg/L near where the Illinois River discharges to the Mississippi River. The isotopic composition of NO3- in water samples from the Illinois River were a mixture of three end members: (1) fertilizer and/or SOM in drain tile water, typically showing the least amount of denitrification, (2) fertilizer and/or SOM in deeper ground water, showing the highest degree of denitrification, and (3) TWW. There was seasonal variability, depending on the volume of water flowing in the Illinois River. During high flow periods, river water samples plotted closest to those of tile drain samples; during low flow periods, a greater influence of TWW was observed in the isotopic composition. A subset of summer samples from the Chicago waterways had isotopic values plotting near and within the domain that characterizes manure and sewage. Nitrate in the Chicago area is primarily derived from TWW, with its isotopic signature evident downstream at least as far as Pekin during most of the year and all the way to the Mississippi River during periods of low flow. Denitrification occurs predominantly in groundwater between and away from drain tiles, although there is evidence that in-stream denitrification and/or biological uptake of NO3- occurs in the Peoria Lake reach of the Illinois River, at least during periods of low flow in the summer. We calculated that the river was losing about half of its NO3-N load in Peoria Lake in August 2005 (a period of very low flow), at a rate of about 7500 kg/day.

Journal of Hydrology↗

Beyond the obvious limits of ore deposits: The use of mineralogical, geochemical, and biological features for the remote detection of mineralization

Far field features of ore deposits include mineralogical, geochemical, or biological attributes that can be recognized beyond the obvious limits of the deposits. They can be primary, if formed in association with mineralization or alteration processes, or secondary, if formed from the interaction of ore deposits with the hydrosphere and biosphere. This paper examines a variety of far field features of different ore deposit types and considers novel applications to exploration and discovery. Primary far field features include mineral and rock chemistry, isotopic or element halos, fluid pathways and thermal anomalies in host-rock sequences. Examples include the use of apatite chemistry to distinguish intrusive rocks permissive for iron oxide copper gold (IOCG) and porphyry deposits; resistate mineral (e.g., rutile, tourmaline) chemistry in exploration for volcanogenic massive sulfide (VMS), orogenic gold, and porphyry deposits; and pyrite chemistry to vector toward sedimentary exhalative (sedex) deposits. Distinctive whole-rock geochemical signatures also can be recognized as a far field feature of porphyry deposits. For example, unique Sr/Y ratios in whole-rock samples, used to distinguish barren versus fertile magmas for Cu mineralization, result from the differentiation of oxidized hydrous melts. Anomalous concentrations of halogen elements (Cl, Br, and I) have been found for distances of up to 200 m away from some mineralized centers. Variations in isotopic composition between ore-bearing and barren intrusions and/or systematic vertical and lateral zonation in sulfur, carbon, or oxygen isotope values have been documented for some deposit types. Owing to the thermal aureole that extends beyond the area of mineralization for some deposits, detection of paleothermal effects through methods such as conodont alteration indices, vitrinite or bitumen reflectance, illite crystallinity, and apatite or zircon thermochronology studies also can be valuable, particularly for deposits with a low-temperature thermal history. A number of newly investigated secondary far field features include the development of reduced columns by electrochemical processes in transported overburden, geochemical dispersion related to the expulsion of groundwater from tectonic and seismic compression, dispersion of vapor above ore deposits, and geochemical dispersion related to biological processes. Redox gradients have been found between underlying reduced and overlying oxidized environments associated with sulfide bodies, which result in mass transfer through electro-chemical dispersion. Recent studies have characterized the pH, oxidation-reduction potential (ORP), and self potential (SP) in overburden overlying sulfide-hosted gold and VMS deposits. Lateral migration of metals in groundwater is well understood from normal groundwater flow, but the processes responsible for vertical mass transfer of groundwater and its dissolved components have been recognized only recently. One process, termed cyclical dilatancy pumping, expels groundwater during and after earthquake events, which can cause the redistribution of metals around deposits in some environments. Soil gases are of interest owing to their high degree of mobility through the vadose zone in transported overburden. Numerous soil gas species (CO2, O2, Hg, Rn, He, sulfur compounds, and light hydrocarbons) have been measured and interpreted as diagnostic of some buried mineral deposits, and some evidence suggests a possible link between vapor dispersion and metal enrichment in soil. Geochemical enrichment in plant material and soils through successive growth-death cycles is well established, but the important role of microorganisms is now increasingly evident. Microorganisms significantly enhance the kinetics of sulfide oxidation and influence the distribution of metals around ore deposits. The presence of metal-resistant bacteria and enhanced concentrations of sulfate-reducing bacteria in exotic overburd

Economic Geology↗

Effect of atrazine on potential denitrification in aquifer sediments

Agriculturaf use of fertilizers and herbicides has often resulted in nitrate and atrazine contamination of the shallow aquifers that underlay cultivated fields. In several cases, the concentrations of atrazine and nitrate dissolved in ground water are positively correlated (Spalding ef al., 1979; Chen and Druliner, 1987; Spalding et al., 1989). Because simultaneous application of nitrate fertilizers and the herbicide, atrazine, is common, the co-occurrence of these contaminants in ground water is not entirely unexpected. However, the possibility also exists that this co-occurrence may ret&t interactions of atrazine with nitrate in the subsurface environment. R&ton and Cervelh (1980), McElhannon ei al. (1984) and Mills (1984) have reported that atrazine inhibits denitrification in‘soil’lf this i‘s indeed the case, atrazine contamination may contribute to nitrate preservation and accumulation in anaerobic aquifers by inhibiting denitrification, the principal mechanism for nitrate removal in anaerobic systems. Huwever, the effect of atrazine on the rate of denit~ficat~on in soils remains controversial, because atrazine has been reported variously to enhance denitrification (Cervelli and Ralston, 1983) or to have no effect on denitrification in soils (Bollag and Henninger, 1976; Yeomans and Bremner, IQ85, 1987). Moreover, the effect of dissolved atrazine concentrations on the rate of denitrification in aquifer sediments has not been reported. Our purpose was to determine the elects of dissolved atrazine concentrations on potential rates ofdenitri~~t~on in aquifer sediments from two different agricultural areas to evaluate the hypothesis that, by inhibiting denitrification, atrazine contributes to nitrate preservation in anaerobic aquifer systems.

Soil Biology and Biochemistry↗

Season of grazing interacts with soil texture, selecting for associations of biocrust morphogroups

Livestock grazing, a widespread land use in semi-arid systems, is often placed in opposition to the perpetuation of biological soil crusts (“biocrusts”: lichens, mosses, and algal crusts including cyanobacteria) that live on the soil surface and provide ecosystem functions. The composition of biocrusts and vascular plants varies with climate, soils, and disturbance. In general, ruderal mosses and light algal crusts make up greater proportions of biocrusts in the presence of disturbance, although morphogroups of biocrusts respond differently to various disturbances. It is unknown if there are scenarios under which grazing can occur and ruderal components of biocrust could be maintained. We examine the hypothesis that soil surface texture-moisture interactions influence the ability of biocrusts to withstand trampling, reasoning that finer-textured soils are firmer (therefore serving as a better substrate for biocrusts) when dry and that coarser-textured are firmer when wet. We test these relationships within Birds of Prey, National Conservation Area (Boise, Idaho, USA). Results demonstrate two associations of biocrusts, dependent on season of grazing: one dominated by light algal crusts and lichens that frequently occurs with wet season grazing, and a second dominated by tall mosses and cup lichens that frequently occurs with dry season grazing. High cover of the invasive annual grass, Bromus tectorum (L.) was observed on sites with coarse-textured soils, and high sand content, that are grazed at relatively high intensities, creating unstable surfaces, and likely putting biocrusts at greater susceptibility to trampling. Results suggest that livestock management that accounts for soil texture and moisture could be used to maintain cover of ruderal biocrusts on fine-textured soils, that are grazed in the dry season, at low intensity. We discuss our findings in the context of managing for species of interest. Our findings are timely as varying the season of grazing is increasingly discussed as a means of favoring desirable native perennial grasses. Although ruderal morphogroups of biocrusts are not interpreted as having equivalent ecosystem functions compared to intact biocrusts, their contributions to soil stability, fertility, hydrology, and weed abatement could increase if they were more intentionally targeted by management.

Geoderma↗

Dynamics of cover, UV-protective pigments, and quantum yield in biological soil crust communities of an undisturbed Mojave Desert shrubland

Biological soil crusts are an integral part of dryland ecosystems. We monitored the cover of lichens and mosses, cyanobacterial biomass, concentrations of UV-protective pigments in both free-living and lichenized cyanobacteria, and quantum yield in the soil lichen species Collema in an undisturbed Mojave Desert shrubland. During our sampling time, the site received historically high and low levels of precipitation, whereas temperatures were close to normal. Lichen cover, dominated by Collema tenax and C. coccophorum , and moss cover, dominated by Syntrichia caninervis , responded to both increases and decreases in precipitation. This finding for Collema spp. at a hot Mojave Desert site is in contrast to a similar study conducted at a cool desert site on the Colorado Plateau in SE Utah, USA, where Collema spp. cover dropped in response to elevated temperatures, but did not respond to changes in rainfall. The concentrations of UV-protective pigments in free-living cyanobacteria at the Mojave Desert site were also strongly and positively related to rainfall received between sampling times ( R 2 values ranged from 0.78 to 0.99). However, pigment levels in the lichenized cyanobacteria showed little correlation with rainfall. Quantum yield in Collema spp. was closely correlated with rainfall. Climate models in this region predict a 3.5–4.0 °C rise in temperature and a 15–20% decline in winter precipitation by 2099. Based on our data, this rise in temperature is unlikely to have a strong effect on the dominant species of the soil crusts. However, the predicted drop in precipitation will likely lead to a decrease in soil lichen and moss cover, and high stress or mortality in soil cyanobacteria as levels of UV-protective pigments decline. In addition, surface-disturbing activities (e.g., recreation, military activities, fire) are rapidly increasing in the Mojave Desert, and these disturbances quickly remove soil lichens and mosses. These stresses combined are likely to lead to shifts in species composition and the local extirpation of some lichen or moss species. As these organisms are critical components of nutrient cycling, soil fertility, and soil stability, such changes are likely to reverberate throughout these ecosystems.

Mojave Desert↗

Environmental Setting and Effects on Water Quality in the Great and Little Miami River Basins, Ohio and Indiana

The Great and Little Miami River Basins drain approximately 7,354 square miles in southwestern Ohio and southeastern Indiana and are included in the more than 50 major river basins and aquifer systems selected for water-quality assessment as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Principal streams include the Great and Little Miami Rivers in Ohio and the Whitewater River in Indiana. The Great and Little Miami River Basins are almost entirely within the Till Plains section of the Central Lowland physiographic province and have a humid continental climate, characterized by well-defined summer and winter seasons. With the exception of a few areas near the Ohio River, Pleistocene glacial deposits, which are predominantly till, overlie lower Paleozoic limestone, dolomite, and shale bedrock. The principal aquifer is a complex buried-valley system of sand and gravel aquifers capable of supporting sustained well yields exceeding 1,000 gallons per minute. Designated by the U.S. Environmental Protection Agency as a sole-source aquifer, the Buried-Valley Aquifer System is the principal source of drinking water for 1.6 million people in the basins and is the dominant source of water for southwestern Ohio. Water use in the Great and Little Miami River Basins averaged 745 million gallons per day in 1995. Of this amount, 48 percent was supplied by surface water (including the Ohio River) and 52 percent was supplied by ground water. Land-use and waste-management practices influence the quality of water found in streams and aquifers in the Great and Little Miami River Basins. Land use is approximately 79 percent agriculture, 13 percent urban (residential, industrial, and commercial), and 7 percent forest. An estimated 2.8 million people live in the Great and Little Miami River Basins; major urban areas include Cincinnati and Dayton, Ohio. Fertilizers and pesticides associated with agricultural activity, discharges from municipal and industrial wastewater-treatment and thermoelectric plants, urban runoff, and disposal of solid and hazardous wastes contribute contaminants to surface water and ground water throughout the study area. Surface water and ground water in the Great and Little Miami River Basins are classified as very hard, calcium-magnesiumbicarbonate waters. The major-ion composition and hardness of surface water and ground water reflect extensive contact with the carbonate-rich soils, glacial sediments, and limestone or dolomite bedrock. Dieldrin, endrin, endosulfan II, and lindane are the most commonly reported organochlorine pesticides in streams draining the Great and Little Miami River Basins. Peak concentrations of the herbicides atrazine and metolachlor in streams commonly are associated with post-application runoff events. Nitrate concentrations in surface water average 3 to 4 mg/L (milligrams per liter) in the larger streams and also show strong seasonal variations related to application periods and runoff events. Ambient iron concentrations in ground water pumped from aquifers in the Great and Little Miami River Basins often exceed the U.S. Environmental Protection Agency Secondary Maximum Contaminant Level (300 micrograms per liter). Chloride concentrations are below aesthetic drinking-water guidelines (250 mg/L), except in ground water pumped from low-yielding Ordovician shale; chloride concentrations in sodium-chloriderich ground water pumped from the shale bedrock can exceed 1,000 mg/L. Some of the highest average nitrate concentrations in ground water in Ohio and Indiana are found in wells completed in the buried-valley aquifer; these concentrations typically are found in those parts of the sand and gravel aquifer that are not overlain by clay-rich till. Atrazine was the most commonly detected herbicide in private wells. Concentrations of volatile organic compounds in ground water generally were below Federal drinking-water standards, except near areas of known or suspected contamination. Evaluation of fish and macroinvertebrate community performance in streams and rivers draining the Great and Little Miami River Basins indicates that most streams meet basic aquatic-life-use criteria set by the Ohio Environmental Protection Agency for warmwater habitat. Stream reaches whose biological community performance meet aquatic-lifeuse criteria defined for exceptional warmwater habitat are found in Twin Creek, the Upper Great Miami River, the Little Miami River, and the Whitewater River Basins. Other streams have exhibited significant improvements in biological community performance (and water quality)'that are attributed primarily to reduced pollutant loadings from wastewater-treatment plants upgraded since 1972. Four hydrogeomorphic regions were delineated in the Great and Little Miami River Basins based on distinct and relatively homogeneous natural characteristics. Primary features used to delineate the hydrogeomorphic regions include bedrock geology, surficial geology, physiography, hydrology, soil types, and vegetation. These four regions Till Plains, Drift Plains/Unglaciated, Interlobate, and Fluvial are used in the Great and Little Miami River Basins study to assess the influence of natural features of the environmental setting on surface- and ground-water quality.

Indiana, Ohio↗

Prevention, early detection and containment of invasive, nonnative plants in the Hawaiian Islands: current efforts and needs

Introduction: Invasive, non-native plants (or environmental weeds) have long been recognized as a major threat to the native biodiversity of oceanic islands (Cronk & Fuller, 1995; Denslow, 2003). Globally, several hundred non-native plant species have been reported to have major impacts on natural areas on oceanic islands (Kueffer et al ., 2009). In Hawaii, at least some 50 non-native plant species reach dominance in natural areas (Kueffer et al ., 2009) and many of them are known to impact ecosystem processes or biodiversity. One example is the invasive Australian tree fern ( Cyathea cooperi ), which has been shown to be very efficient at utilizing soil nitrogen and can grow six times as rapidly in height, maintain four times more fronds, and produce significantly more fertile fronds per month than the native Hawaiian endemic tree ferns, Cibotium spp. (Durand & Goldstein, 2001a, b). Additionally, while native tree ferns provide an ideal substrate for epiphytic growth of many understory ferns and flowering plants, the Australian tree fern has the effect of impoverishing the understory and failing to support an abundance of native epiphytes (Medeiros & Loope, 1993). Other notorious examples of invasive plant species problematic for biodiversity and ecosystem processes in Hawaii include miconia ( Miconia calvescens ), strawberry guava ( Psidium cattleianum ), albizia ( Falcataria moluccana ), firetree ( Morella faya ), clidemia ( Clidemia hirta ), kahili ginger ( Hedychium gardnerianum ), and fountain grass ( Pennisetum setaceum ), to name just a few. Fireweed ( Senecio madagascariensis ) is a recent example of a seriously problematic invasive species for Hawaii’s agriculture and is damaging certain high-elevations native ecosystems as well. The threat of invasive plants has long been recognized in Hawaii and is well documented (e.g. Cox, 1999; Loope & Kraus, 2009 in press; Loope et al ., 2004; Mooney & Drake, 1986; Stone & Scott, 1985; Stone et al. , 1992). In many respects, Hawaii may be near the forefront among national and international efforts to address the burgeoning threat of invasive plants, perhaps especially in the field of outreach and education (Holt, 1996; Van Driesche & Van Driesche, 2000). However, given the scale of the problem many challenges still need to be addressed and gaps in the existing management system need to be identified. In particular, it appears that new non-native plant species are still introduced to the Hawaiian Islands at a high rate with little or no regard for their potential invasiveness. In fact, a Pacific-wide and a global survey of non-native plants on oceanic islands have both shown that on Hawaii among all archipelagos by far the highest number of problematic invasive species known from other areas in the world is already present (Denslow et al . 2009, Kueffer et al . 2009). Hawaii lacks an effective mechanism for tracking what species are present or incoming. For instance, early detection nursery surveys conducted on Maui in 2008 found over 300 species of cultivated vascular plants that have not previously been recorded in Hawaii (Starr et al. , in prep.). In spite of an innovative Hawaii Biological Survey (e.g. Eldredge & Evenhuis, 2003), there is no mechanism for recording presence of a species until it becomes naturalized. Some of these new introductions may quickly become serious pests. Fireweed, first recorded in Hawaii on the Big Island in the early 1980s, is now considered one of the Kueffer & Loope 2009 5/48 worst weeds of pastures and is also invading natural areas from near sea level to above 10,000 feet. Although the cultivated and as yet non-invasive Cortaderia selloana has been present in Hawaii for 50 years or more, the morphologically similar Cortaderia jubata was simultaneously found to be present on Maui and invading on a large scale in 1989. It played an important role in inspiring the establishment of the Maui Invasive Species Committee (MISC) in 1997, and MISC now spends roughly $200,000 per year removing and containing C. jubata to keep it from becoming widespread in high elevation conservation lands of East and West Maui. The existence of many similar examples shows that to date regulatory action to prevent new invasive plant species from establishing and spreading in Hawaii has not yet been as successful as it needs to be. In particular, because some problematic invasive species known from other areas in the world (Kueffer et al ., 2009; Weber, 2003) have not yet been recorded from Hawaii, preventive measures against the introduction and spread of such likely invasive species is therefore an urgent need for Hawaii. Indeed, regulation of importation and early detection and eradication of introduced species before they become abundant and widespread are widely considered the most cost-efficient and often only effective measures against the threat of new invasive species (Kueffer & Hirsch Hadorn, 2008; Wittenberg & Cock, 2001). Timing seems favorable for Hawaii to achieve effective protection against the threat of new invasive species through prevention, early detection, and eradication/containment. Through the establishment and evolution of Invasive Species Committees (ISCs) on each major Hawaiian island, the institutional capacity has been built up for prevention, early detection, containment, and outreach at an island scale. Weed risk assessment (Daehler et al ., 2004) and early detection methodologies (Starr et al. , in review-a, b) have been developed and tested specifically for Hawaii. Containment strategies have been successful (e.g., Special Ecological Areas in Hawaii Volcanoes National Park), and so have eradications of particular species on an island scale (e.g. mullein ( Verbascum thapsus ) and other species on Maui, fireweed ( Senecio madagascariensis ) on Kauai). These successful management strategies may be further strengthened through recently developed novel approaches in research (e.g. remote sensing, species distribution modelling, and molecular genetics tools). Another major recent achievement is the gained support of the plant industry for preventive measures against invasive species (see p. 13ff). Last but not least, regulatory action is also moving forward. Passage of House Bill 2517 by the 2008 Hawaii House and Senate and prompt signing of the bill into law by the Governor provides hope that action to ban the sale of a meaningful suite of restricted weeds can quickly proceed through the rulemaking phase into the implementation phase. This report documents these achievements and experiences and provides a range of perspectives on how to further develop prevention, early detection and containment of invasive species in Hawaii. The report is based on a symposium and workshop held at the 2008 Hawaii Conservation Conference in Honolulu on 31 July 2008.

Hawaii↗

Nutrient loading and selected water-quality and biological characteristics of Dickinson Bayou near Houston, Texas, 1995-97

Data were collected at 10 stations in the Dickinson Bayou watershed near Houston, Texas, from March 1995 through February 1997 to estimate the concentrations, loads, and yields of selected nutrients that enter the bayou; to characterize the effects on nutrient concentrations of flow conditions, seasonality, and land use; and to identify nutrient sources (point or nonpoint) inferred from the occurrence and abundance of algal species in the benthic algal community. These data included rainfall samples, streamflow measurements, stream-water-quality samples, and biological samples, in addition to quality-assurance/quality-control samples. Estimates of loads of selected nutrients for the 106-square-mile watershed during the study were made for point sources and nonpoint sources. Point-source loading data are available only for ammonia nitrogen. Approximately 21.3 pounds per day of ammonia nitrogen is estimated from point sources during the study period. Nonpoint-source loads are estimated for eight nutrient forms: 7.84 pounds per day of dissolved ammonia nitrogen, 5.79 pounds per day of dissolved nitrite nitrogen, 215 pounds per day of dissolved Kjeldahl nitrogen, 350 pounds per day of total Kjeldahl nitrogen, 40.1 pounds per day of dissolved nitrite plus nitrate nitrogen, 67.6 pounds per day of total phosphorus, 46.6 pounds per day of dissolved phosphorus, and 42.8 pounds per day of dissolved orthophosphate. Rainfall-deposition rates also are estimated for comparison with point- and nonpoint-source loads. Deposition rates are 110 pounds per day of dissolved ammonia nitrogen, 120 pounds per day of dissolved nitrate nitrogen, and 15.8 pounds per day of dissolved phosphorus. Statistical tests were used to determine whether there are significant differences between nutrient concentrations during low-flow and during high-flow conditions. For basins with rural/mixed and urban land uses, nutrient concentrations generally are significantly different (greater) during storm events than during low flow, indicating accumulation in the watershed and subsequent washoff of nutrients. However, nutrient concentrations in storm-event samples consisting predominantly of runoff from a pasture are not significantly greater than those in low-flow samples. Statistical tests for seasonality indicate that dissolved ammonia nitrogen is significantly different in at least one season for all land uses (rural/residential, rural/mixed, and pasture) except urban. Concentrations tend to increase in the spring and early summer months, possibly from fertilizer application and subsequent washoff. Constituent-yield data were used to make direct comparisons of the nonpoint-source load contributions from four stations with watersheds of different land use. These comparisons lead to three conclusions: (1) For all nutrient species except orthophosphate, urban land use is the largest nonpoint-source contributor, (2) Kjeldahl nitrogen is the most abundant nutrient species, and (3) organic nitrogen accounts for the major part of the Kjeldahl nitrogen. Algal samples were collected at seven stations and were analyzed for periphyton identification and enumeration, and chlorophyll a and chlorophyll b concentrations. The large relative abundance of soil algae at stations in the middle of the watershed likely indicates the cumulative effects on water quality of agricultural nonpoint sources. Farther downstream near the State Highway 3 bridge, and downstream of three major tributary inflows, the increase in abundance of soil algae to a larger-than-expected level might reflect water-quality influences from predominantly urban nonpoint sources in the drainage basins of the three major tributary inflows. Nutrient concentrations do not appear to limit algal production in the upper (non-tidal) reach of Dickinson Bayou; but nutrient concentrations could have been limiting benthicalgal production in the lower (tidal) reach of the bayou during the time of the synoptic survey. If nitrogen is the limiting resource for algal productivity in the tidal reach of Dickinson Bayou, eutrophication of the system could be (at least partially) mitigated if nonpoint-source nutrient loads into the Bayou were reduced.

Texas↗

Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020

In 2016, Colorado Parks and Wildlife identified filamentous algae collected from the main stem White River as Cladophora glomerata , a pervasive nuisance aquatic alga. Excessive levels of filamentous algae can compromise aesthetic quality, limit recreational activities, and have negative effects on aquatic life including strong fluctuations in dissolved oxygen levels and a reduction in overall biodiversity. To increase understanding of the biology of the upper White River Basin in Colorado, identify potential factors promoting or limiting nuisance algal abundance, and outline information to aid in the understanding and protection of water resources, the U.S. Geological Survey (USGS), in cooperation with the White River and Douglas Creek Conservation Districts and the White River Algae Technical Advisory Group, initiated a study to collect and analyze physical, chemical, and biological information for the upper White River Basin. The report describes long-term changes and spatial variations in streamflow and nutrient concentrations and loads in the upper White River Basin and identifies possible nutrient sources in the basin. Long-term streamflow and nutrient data indicate that conditions in the upper White River Basin have become more favorable to benthic algae over varying timescales. Upward trends in total phosphorus concentrations and loads were found at three sites across the basin from 2000 to 2020. Total phosphorus loads increased around 50 percent, ranging from 18 to 48 pounds per year. Annual estimated concentrations of total phosphorus from 2005 to 2020 were above algal-specific nutrient criteria at the North Fork White River at Buford, Colo., indicating that phosphorus concentrations at this site likely promote algal growth. Discrete concentrations of total phosphorus exceeded algal-specific nutrient criteria on the South Fork and main stem White River during the summer season, though less frequently than samples collected from the North Fork White River. Nitrogen to phosphorus molar ratios collected from July to September indicate movement from colimitation (10–22) to nitrogen limited (less than 13) conditions at the North Fork White River at Buford, Colo. and the South Fork White River at Buford, Colo. starting in 2012. The magnitude of trends in phosphorus loads were generally greater than trends in concentrations across all sites, indicating that the largest changes in concentrations occurred during greater streamflow periods. At White River above Coal Creek, near Meeker, Colo., significant downward trends in streamflow were found in August and September for mean streamflow (15 and 14 percent per decade, respectively) and 7-day minimum streamflows (23 and 22 percent per decade, respectively). Significant downward trends in annual 7-day minimum streamflows of 24 percent per decade, or 66 percent over the 40-year period of analysis, were also observed. Though not significant based on 90-percent confidence intervals, downward trends in 1-day maximum and mean streamflows in May and June and corresponding increases in April may indicate a shift toward earlier snowmelt runoff, as observed across western North America and the Colorado River Basin. Alteration of the annual hydrograph can influence factors that influence algae including nutrient input and dilution potential, water temperature, dissolved oxygen, light availability, and physical disturbance. Results from a synoptic-style sampling identified the lower North Fork White River subbasin as a large source of phosphorus to the downstream system. Large increases in phosphorus loads were observed below Marvine Creek. Synoptic samples and samples collected during spring and summer of 2019 and 2020 also show large increases in total nitrogen, orthophosphate, and total phosphorus occurring at the furthest three downstream sites on the White River. To further evaluate sources of nitrogen in the upper White River Basin, the dual isotopic composition of nitrate was compared across four sites. The isotopic compositions of nitrate were all within the expected range of typical soil-derived nitrate, though the same values can also be derived from a mixture of agricultural fertilizer and manure or septic sources.

Colorado↗