SEARCH · Geology Reports

Results for “Tropics”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 883 records · Page 49Linked to original sources

USGS2009

Evidence for prolonged El Nino-like conditions in the Pacific during the Late Pleistocene: a 43 ka noble gas record from California groundwaters

Information on the ocean/atmosphere state over the period spanning the Last Glacial Maximum - from the Late Pleistocene to the Holocene - provides crucial constraints on the relationship between orbital forcing and global climate change. The Pacific Ocean is particularly important in this respect because of its dominant role in exporting heat and moisture from the tropics to higher latitudes. Through targeting groundwaters in the Mojave Desert, California, we show that noble gas derived temperatures in California averaged 4.2 ?? 1.1 ??C cooler in the Late Pleistocene (from ???43 to ???12 ka) compared to the Holocene (from ???10 to ???5 ka). Furthermore, the older groundwaters contain higher concentrations of excess air (entrained air bubbles) and have elevated oxygen-18/oxygen-16 ratios (?? 18 O) - indicators of vigorous aquifer recharge, and greater rainfall amounts and/or more intense precipitation events, respectively. Together, these paleoclimate indicators reveal that cooler and wetter conditions prevailed in the Mojave Desert from ???43 to ???12 ka. We suggest that during the Late Pleistocene, the Pacific ocean/atmosphere state was similar to present-day El Nino-like patterns, and was characterized by prolonged periods of weak trade winds, weak upwelling along the eastern Pacific margin, and increased precipitation in the southwestern U.S.

Quaternary Science Reviews↗

USGS2015

The Holocene history of the North American Monsoon: 'known knowns' and 'known unknowns' in understanding its spatial and temporal complexity

Evidence for climatic change across the North American Monsoon (NAM) and adjacent areas is reviewed, drawing on continental and marine records and the application of climate models. Patterns of change at 12,000, 9000, 6000 and 4000 cal yr BP are presented to capture the nature of change from the Younger Dryas (YD) and through the mid-Holocene. At the YD, conditions were cooler overall, wetter in the north and drier in the south, while moving into the Holocene wetter conditions became established in the south and then spread north as the NAM strengthened. Until c. 8000 cal yr BP, the Laurentide Ice Sheet influenced precipitation in the north by pushing the Bermuda High further south. The peak extent of the NAM seems to have occurred around 6000 cal yr BP. 4000 cal yr BP marks the start of important changes across the NAM region, with drying in the north and the establishment of the clear differences between the summer-rain dominated south and central areas and the north, where winter rain is more important. This differentiation between south and north is crucial to understanding many climate responses across the NAM. This increasing variability is coincident with the declining influence of orbital forcing. 4000 cal yr BP also marks the onset of significant anthropogenic activity in many areas. For the last 2000 years, the focus is on higher temporal resolution change, with strong variations across the region. The Medieval Climate Anomaly (MCA) is characterised by centennial scale ‘megadrought’ across the southwest USA, associated with cooler tropical Pacific SSTs and persistent La Niña type conditions. Proxy data from southern Mexico, Central America and the Caribbean reveal generally wetter conditions, whereas records from the highlands of central Mexico and much of the Yucatan are typified by long -term drought. The Little Ice Age (LIA), in the north, was characterised by cooler, wetter winter conditions that have been linked with increased frequency of El Niño's. Proxy records in the central and southern regions reveal generally dry LIA conditions, consistent with cooler SSTs in the Caribbean and Gulf of Mexico. This synthesis demonstrates that in some periods, one major forcing can dominate across the whole area (e.g. insolation in the early-mid Holocene), but at other times there is strong variability in patterns of change due to the differential impact of forcings such as the Pacific Decadal Oscillation (PDO) and the Atlantic Multidecadal Oscillation (AMO) on precipitation seasonality.

Quaternary Science Reviews↗

USGS2016

Teleconnected ocean forcing of Western North American droughts and pluvials during the last millennium

Western North America (WNA) is rich in hydroclimate reconstructions, yet questions remain about the causes of decadal-to-multidecadal hydroclimate variability. Teleconnection patterns preserved in annually-resolved tree-ring reconstructed drought maps, and anomalies in a global network of proxy sea surface temperature (SST) reconstructions, were used to reassess the evidence linking ocean forcing to WNA hydroclimate variability over the past millennium. Potential forcing mechanisms of the Medieval Climate Anomaly (MCA) and individual drought and pluvial events—including two multidecadal-length MCA pluvials—were evaluated. We show strong teleconnection patterns occurred during the driest (wettest) years within persistent droughts (pluvials), implicating SSTs as a potent hydroclimate forcing mechanism. The role of the SSTs on longer timescales is more complex. Pacific teleconnection patterns show little long-term change, whereas low-resolution SST reconstructions vary over decades to centuries. While weaker than the tropical Pacific teleconnections, North Atlantic teleconnection patterns and SST reconstructions also show links to WNA droughts and pluvials, and may in part account for longer-term WNA hydroclimate changes. Nonetheless, evidence linking WNA hydroclimate to SSTs still remains sparse and nuanced—especially over long-timescales with a broader range of hydroclimatic variability than characterized during the 20th century.

Quaternary Science Reviews↗

USGS2019

Radiocarbon and geologic evidence reveal Ilopango volcano as source of the colossal 'mystery' eruption of 539/40 CE

Ilopango volcano (El Salvador) erupted violently during the Maya Classic Period (250–900 CE) in a densely-populated and intensively-cultivated region of the southern Maya realm, causing regional abandonment of an area covering more than 20,000 km 2 . However, neither the regional nor global impacts of the Tierra Blanca Joven (TBJ) eruption in Mesoamerica have been well appraised due to limitations in available volcanological, chronological, and archaeological observations. Here we present new evidence of the age, magnitude and sulfur release of the TBJ eruption, establishing it as one of the two hitherto unidentified volcanic triggers of a period of stratospheric aerosol loading that profoundly impacted Northern Hemisphere climate and society between circa 536 and 550 CE. Our chronology is derived from 100 new radiocarbon measurements performed on three subfossil tree trunks enveloped in proximal TBJ pyroclastic deposits. We also reassess the eruption magnitude using terrestrial (El Salvador, Guatemala, Honduras) and near-shore marine TBJ tephra deposit thickness measurements. Together, our new constraints on the age, eruption size (43.6 km 3 Dense Rock Equivalent of magma, magnitude = 7.0) and sulfur yield (∼9–90 Tg), along with Ilopango's latitude (13.7° N), squarely frame the TBJ as the major climate-forcing eruption of 539 or 540 CE identified in bipolar ice cores and sourced to the tropics. In addition to deepening appreciation of the TBJ eruption's impacts in Mesoamerica, linking it to the major Northern Hemisphere climatic downturn of the mid-6th century CE offers another piece in the puzzle of understanding Eurasian history of the period.

Guazapa↗

USGS2022

Contrasting Common Era climate and hydrology sensitivities from paired lake sediment dinosterol hydrogen isotope records in the South Pacific Convergence Zone

Hydroclimate on ‘Uvea (Wallis et Futuna) is controlled by rainfall associated with the South Pacific Convergence Zone (SPCZ), the southern hemisphere's largest precipitation feature. To extend the short observational precipitation record, the hydrogen isotopic composition of the algal lipid biomarker dinosterol (δ 2 H dinosterol ) was measured in sediment cores from two volcanic crater lakes on ‘Uvea. The modern lakes differ morphologically and chemically but both contain freshwater within the photic zone, support phytoplankton communities inclusive of dinosterol-producing dinoflagellates, and experience identical climate conditions. δ 2 H dinosterol values track lake water isotope ratios, ultimately controlled in the tropics by precipitation amount and evaporative enrichment. However, in 88-m-deep Lac Lalolalo a steadily decreasing trend in sedimentary δ 2 H dinosterol values from −227‰ around year 988 CE to modern values as low as −303‰, suggests this lake's evolution from an active volcanic setting to the present system strongly influenced δ 2 H dinosterol values. Although current hydrology and water isotope systematics may now reflect precipitation and evaporation in this lake, the interaction between these processes and large changes in basin morphology, geochemistry, and hydrology obstruct the recovery of a climate signal from Lac Lalolalo's sedimentary δ 2 H dinosterol records. This work emphasizes the importance of site replication and the use of complementary climate reconstruction tools, especially when using molecular proxies that may be sensitive to more than one environmental parameter. Contrary to its neighbor, duplicate δ 2 H dinosterol records from 23-m-deep Lac Lanutavake varied between −277‰ and −297‰ and indicate slightly drier conditions during the time-period known as the Medieval Climate Anomaly (MCA, 950–1250 CE). The δ 2 H dinosterol signal in Lac Lanutavake was muted compared to published records from ‘Upolu (Samoa) and Efate (Vanuatu) indicating that ‘Uvea's location is not as sensitive to precipitation variability at sites farther from the SPCZ central axis. Lithogenic runoff proxies combined with δ 2 H dinosterol support the interpretation of a relatively dry MCA on ‘Uvea, ‘Upolu, and Efate, potentially due to less intense precipitation, a contracted, or a more zonally oriented SPCZ.

Efate Island, Lac Lalolalo, Lac Lanoto'o, Lac Lanu↗

USGS2022

Seasonality of precipitation in the southwestern United States during the late Pleistocene inferred from stable isotopes in herbivore tooth enamel

The late Pleistocene was a climatically dynamic period, with abrupt shifts between cool-wet and warm-dry conditions. Increased effective precipitation supported large pluvial lakes and long-lived spring ecosystems in valleys and basins throughout the western and southwestern U.S., but the source and seasonality of the increased precipitation are debated. Increases in the proportions of C 4 /(C 4 + C 3 ) grasses in the diets of large grazers have been ascribed both to increases in summer precipitation and lower atmospheric CO 2 levels. Here we present stable carbon and oxygen isotope data from tooth enamel of late Pleistocene herbivores recovered from paleowetland deposits at Tule Spring Fossil Beds National Monument in the Las Vegas Valley of southern Nevada, as well as modern herbivores from the surrounding area. We use these data to investigate whether winter or summer precipitation was responsible for driving the relatively wet hydroclimate conditions that prevailed in the region during the late Pleistocene. We also evaluate whether late Pleistocene grass C 4 /(C 4 + C 3 ) was higher than today, and potential drivers of any changes. Tooth enamel δ 18 O values for Pleistocene Equus , Bison , and Mammuthus are generally low (average 22.0 ± 0.7‰, 2 s.e., VSMOW) compared to modern equids (27.8 ± 1.5‰), and imply lower water δ 18 O values (−16.1 ± 0.8‰) than modern precipitation (−10.5‰) or in waters present in active springs and wells in the Las Vegas Valley (−12.9‰), an area dominated by winter precipitation. In contrast, tooth enamel of Camelops (a browser) generally yielded higher δ 18 O values (23.9 ± 1.1‰), possibly suggesting drought tolerance. Mean δ 13 C values for the Pleistocene grazers (−6.6 ± 0.7‰, 2 s.e., VPDB) are considerably higher than for modern equids (−9.6 ± 0.4‰) and indicate more consumption of C 4 grass (17 ± 5%) than today (4 ± 4%). However, calculated C 4 grass consumption in the late Pleistocene is strikingly lower than the proportion of C 4 grass taxa currently present in the valley (55–60%). δ 13 C values in Camelops tooth enamel (−7.7 ± 1.0‰) are interpreted as reflecting moderate consumption (14 ± 8%) of Atriplex (saltbush), a C 4 shrub that flourishes in regions with hot, dry summers. Lower water δ 18 O values, lower abundance of C 4 grasses, and the inferred presence of Atriplex are all consistent with general circulation models for the late Pleistocene that show enhanced delivery of winter precipitation, sourced from the north Pacific, into the interior western U.S. but do not support alternative models that infer enhanced delivery of summer precipitation, sourced from the tropics. In addition, we hypothesize that dietary competition among the diverse and abundant Pleistocene fauna may have driven the grazers analyzed here to feed preferentially on C 4 grasses. Dietary partitioning, especially when combined with decreased p CO2 levels during the late Pleistocene, can explain the relatively high δ 13 C values observed in late Pleistocene grazers in the Las Vegas Valley and elsewhere in the southwestern U.S. without requiring additional summer precipitation. Pleistocene hydroclimate parameters derived from dietary and floral records may need to be reevaluated in the context of the potential effects of dietary preferences and lower p CO2 levels on the stability of C 3 vs. C 4 plants.

Nevada↗

USGS2011

An analysis of modern pollen rain from the Maya lowlands of northern Belize

In the lowland Maya area, pollen records provide important insights into the impact of past human populations and climate change on tropical ecosystems. Despite a long history of regional paleoecological research, few studies have characterized the palynological signatures of lowland ecosystems, a fact which lowers confidence in ecological inferences made from palynological data. We sought to verify whether we could use pollen spectra to reliably distinguish modern ecosystem types in the Maya lowlands of Central America. We collected 23 soil and sediment samples from eight ecosystem types, including upland, riparian, secondary, and swamp ( bajo ) forests; pine savanna; and three distinct wetland communities. We analyzed pollen spectra with non-metric multidimensional scaling (NMDS), and found significant compositional differences in ecosystem types' pollen spectra. Forested sites had spectra dominated by Moraceae/Urticaceae pollen, while non-forested sites had significant portions of Poaceae, Asteraceae, and Amaranthaceae pollen. Upland, bajo , and riparian forest differed in representation of Cyperaceae, Bactris -type, and Combretaceae/Melastomataceae pollen. High percentages of pine ( Pinus ), oak ( Quercus ), and the presence of Byrsonima characterized pine savanna. Despite its limited sample size, this study provides one of the first statistical analyses of modern pollen rain in the Maya lowlands. Our results show that pollen assemblages can accurately reflect differences between ecosystem types, which may help refine interpretations of pollen records from the Maya area.

Maya lowlands↗

USGS2010

Global estimates of evapotranspiration and gross primary production based on MODIS and global meteorology data

The simulation of gross primary production (GPP) at various spatial and temporal scales remains a major challenge for quantifying the global carbon cycle. We developed a light use efficiency model, called EC-LUE, driven by only four variables: normalized difference vegetation index (NDVI), photosynthetically active radiation (PAR), air temperature, and the Bowen ratio of sensible to latent heat flux. The EC-LUE model may have the most potential to adequately address the spatial and temporal dynamics of GPP because its parameters (i.e., the potential light use efficiency and optimal plant growth temperature) are invariant across the various land cover types. However, the application of the previous EC-LUE model was hampered by poor prediction of Bowen ratio at the large spatial scale. In this study, we substituted the Bowen ratio with the ratio of evapotranspiration (ET) to net radiation, and revised the RS-PM (Remote Sensing-Penman Monteith) model for quantifying ET. Fifty-four eddy covariance towers, including various ecosystem types, were selected to calibrate and validate the revised RS-PM and EC-LUE models. The revised RS-PM model explained 82% and 68% of the observed variations of ET for all the calibration and validation sites, respectively. Using estimated ET as input, the EC-LUE model performed well in calibration and validation sites, explaining 75% and 61% of the observed GPP variation for calibration and validation sites respectively. Global patterns of ET and GPP at a spatial resolution of 0.5° latitude by 0.6° longitude during the years 2000–2003 were determined using the global MERRA dataset (Modern Era Retrospective-Analysis for Research and Applications) and MODIS (Moderate Resolution Imaging Spectroradiometer). The global estimates of ET and GPP agreed well with the other global models from the literature, with the highest ET and GPP over tropical forests and the lowest values in dry and high latitude areas. However, comparisons with observed GPP at eddy flux towers showed significant underestimation of ET and GPP due to lower net radiation of MERRA dataset. Applying a procedure to correct the systematic errors of global meteorological data would improve global estimates of GPP and ET. The revised RS-PM and EC-LUE models will provide the alternative approaches making it possible to map ET and GPP over large areas because (1) the model parameters are invariant across various land cover types and (2) all driving forces of the models may be derived from remote sensing data or existing climate observation networks.

Remote Sensing of Environment↗

USGS2024

Tracking mangrove condition changes using dense Landsat time series

Mangroves in tropical and subtropical coasts are subject to episodic disturbances, notably from severe storms, leading to potential widespread vegetation mortality. The ability of vegetation to recover varies, and with disturbances becoming more frequent and severe, it is vital to track and project vegetation responses to support management and policy decisions. Prior studies have largely focused on binary mangrove mapping (i.e., presence or absence), while tracking conditions and condition change have not received sufficient attention. In this paper, we demonstrate a method based on dense time series Landsat images for continuous monitoring of mangrove conditions, where we track three kinds of post-disturbance mangrove conditions, including disturbed (disturbed, with rebound to the previous state within one growing season), recovering (undergoing natural recovery in longer than one growing season), and declining (showing long-term decline after disturbance). The method starts with disturbance detection using the DEtection and Characterization Of the tiDal wEtland change (DECODE) algorithm, an existing dense time series model designed to detect disturbances in tidal wetlands with adaptation to tidal fluctuations. This algorithm is well suited for the detection of tidal wetland disturbances but does not provide satisfactory post-disturbance monitoring results, due to the substantial variability in post-disturbance Landsat observations. To better monitor post-disturbance conditions, a new time series fitting approach, DECODER (DECODE and Recovery), is proposed for the recovery stage. Additionally, for temporal segments divided by disturbance events, we built a random forest classifier with temporal-spectral variables derived from the time series model to characterize mangrove conditions. Employing this approach in Florida's mangroves, we generated condition maps, such as dieback and recovery, with an overall accuracy of approximately 97.96 ± 0.86- [95 % confidence intervals]. Comparing post-hurricane conditions in Florida revealed that the increased frequency and severity of disturbances are challenging mangrove resilience, potentially diminishing their ability to recover and sustain ecosystem functions.

Florida↗

USGS2019

Life history, genetics, range expansion and new frontiers of the lionfish (Pterois volitans, Perciformes: Pteroidae) in Latin America

Pterois volitans (lionfish) is a midsize predatory fish commonly found in waters of the western Pacific and Indian Ocean. The species was first documented in Dania Beach, Florida (northwestern Caribbean) in 1985. Since that time the species has expanded its range rapidly to the Northwestern Atlantic Ocean, Gulf of Mexico, and Caribbean Sea. Since its introduction P. volitans has changed community structure and biodiversity of Caribbean reef communities and other coastal tropical ecosystems. Continuous introductions (accidental or intentional), limited natural predators, naïve-range prey behavior, high predation rates on competitors, continuous reproduction, and an extended period of larval dispersal have been the keys for successful invasion and rapid range extension of P. volitans . This invasion has become so severe that it has been recognized as one of the world’s top conservation issues. Here, we review the life history, behavior, and historical and contemporary genetic patterns that facilitate expansion and the colonization process. A greater understanding of lionfish biology, ecology, and the changes related to its present condition as a super-invader could improve current and future management strategies and new detection and response methodologies. We also examine new invasion frontiers that this species has the potential to colonize such as the eastern Pacific. This information will provide managers, the scientific community, and the civil society better tools for eradication, control and management of future invasions of this and other invasive species.

Caribbean Sea, Latin America↗

USGS2006

Water and solute mass balance of five small, relatively undisturbed watersheds in the U.S.

Geochemical mass balances were computed for water years 1992-1997 (October 1991 through September 1997) for the five watersheds of the U.S. Geological Survey Water, Energy, and Biogeochemical Budgets (WEBB) Program to determine the primary regional controls on yields of the major dissolved inorganic solutes. The sites, which vary markedly with respect to climate, geology, physiography, and ecology, are: Allequash Creek, Wisconsin (low-relief, humid continental forest); Andrews Creek, Colorado (cold alpine, taiga/tundra, and subalpine boreal forest); Ri??o Icacos, Puerto Rico (lower montane, wet tropical forest); Panola Mountain, Georgia (humid subtropical piedmont forest); and Sleepers River, Vermont (humid northern hardwood forest). Streamwater output fluxes were determined by constructing empirical multivariate concentration models including discharge and seasonal components. Input fluxes were computed from weekly wet-only or bulk precipitation sampling. Despite uncertainties in input fluxes arising from poorly defined elevation gradients, lack of dry-deposition and occult-deposition measurements, and uncertain sea-salt contributions, the following was concluded: (1) for solutes derived primarily from rock weathering (Ca, Mg, Na, K, and H4SiO4), net fluxes (outputs in streamflow minus inputs in deposition) varied by two orders of magnitude, which is attributed to a large gradient in rock weathering rates controlled by climate and geologic parent material; (2) the net flux of atmospherically derived solutes (NH4, NO3, SO4, and Cl) was similar among sites, with SO4 being the most variable and NH4 and NO3 generally retained (except for NO 3 at Andrews); and (3) relations among monthly solute fluxes and differences among solute concentration model parameters yielded additional insights into comparative biogeochemical processes at the sites. ?? 2005 Elsevier B.V. All rights reserved.

Science of the Total Environment↗

USGS2012

The population structure of Escherichia coli isolated from subtropical and temperate soils

While genotypically-distinct naturalized Escherichia coli strains have been shown to occur in riparian soils of Lake Michigan and Lake Superior watersheds, comparative analyses of E. coli populations in diverse soils across a range of geographic and climatic conditions have not been investigated. The main objectives of this study were to: (a) examine the population structure and genetic relatedness of E. coli isolates collected from different soil types on a tropical island (Hawaii), and (b) determine if E. coli populations from Hawaii and temperate soils (Indiana, Minnesota) shared similar genotypes that may be reflective of biome-related soil conditions. DNA fingerprint and multivariate statistical analyses were used to examine the population structure and genotypic characteristics of the E. coli isolates. About 33% (98 of 293) of the E. coli from different soil types and locations on the island of Oahu, Hawaii, had unique DNA fingerprints, indicating that these bacteria were relatively diverse; the Shannon diversity index for the population was 4.03. Nearly 60% (171 of 293) of the E. coli isolates from Hawaii clustered into two major groups and the rest, with two or more isolates, fell into one of 22 smaller groups, or individual lineages. Multivariate analysis of variance of 89, 21, and 106 unique E. coli DNA fingerprints for Hawaii, Indiana, and Minnesota soils, respectively, showed that isolates formed tight cohesive groups, clustering mainly by location. However, there were several instances of clonal isolates being shared between geographically different locations. Thus, while nearly identical E. coli strains were shared between disparate climatologically- and geographically-distinct locations, a vast majority of the soil E. coli strains were genotypically diverse and were likely derived from separate lineages. This supports the hypothesis that these bacteria are not unique and multiple genotypes can readily adapt to become part of the soil autochthonous microflora.

Hawai'i, Indiana, Minnesota↗

USGS2021

Global response of terrestrial gross primary productivity to climate extremes

Extreme climate events undoubtedly have essential impacts on ecosystem gross primary productivity (GPP), but the global spatio-temporal patterns of GPP responses to climate extremes are unclear. In this study, we analyzed the responses of GPP to temperature and precipitation extremes during historical (1901–2016) and future (2006–2100) periods using climate extreme indices (CEIs) developed by the Expert Team on Climate Change Detection and Indices. Eight temperature-related CEIs and eight precipitation-related CEIs were used for this analysis, along with three future greenhouse gas concentration trajectory scenarios generated by the IPCC: RCP 2.6, RCP 4.5, and RCP 8.5. Our results show that under RCP 4.5 and RCP 8.5, most climate extremes are increasing from the historical period into the future, indicating a warming globe with more frequent and more intense extreme climate events. But the increasing rate is only persistently enhanced with time under scenario RCP 8.5. GPP shows a continuous negative relationship with cold CEIs and positive relationship with wet CEIs from the historical period into the future. In all zonal scales, the changed magnitude of GPP responds strongly to extreme value-related temperature extremes under different scenarios. However, the precipitation-related extremes with the strongest GPP response are various in different regions. In the future, GPP is most sensitive to temperature extremes in upper northern latitudes and in high-altitude regions (e.g., Qinghai-Tibet Plateau) and to precipitation extremes in the tropical zone. This study may provide a basis for predicting how GPP responds to climate extremes and explaining the underlying changes in the carbon cycle.

Science of the Total Environment↗

USGS2010

Shifting microbial community structure across a marine terrace grassland chronosequence, Santa Cruz, California

Changes in the biomass and structure of soil microbial communities have the potential to impact ecosystems via interactions with plants and weathering minerals. Previous studies of forested long-term (1000s – 100,000s of years) chronosequences suggest that surface microbial communities change with soil age. However, significant gaps remain in our understanding of long-term soil microbial community dynamics, especially for non-forested ecosystems and in subsurface soil horizons. We investigated soil chemistry, aboveground plant productivity, and soil microbial communities across a grassland chronosequence (65,000–226,000 yrs old) located near Santa Cruz, CA. Aboveground net primary productivity (ANPP) initially increased to a maximum and then decreased for the older soils. We used polar lipid fatty acids (PLFA) to investigate microbial communities including both surface (<0.1 m) and subsurface (≥0.2 m) soil horizons. PLFAs characteristic of Gram-positive bacteria and actinobacteria increased as a fraction of the microbial community with depth while the fungal fraction decreased relative to the surface. Differences among microbial communities from each chronosequence soil were found primarily in the subsurface where older subsurface soils had smaller microbial community biomass, a higher proportion of fungi, and a different community structure than the younger subsurface soil. Subsurface microbial community shifts in biomass and community structure correlated with, and were likely driven by, decreasing soil P availability and Ca concentrations, respectively. Trends in soil chemistry as a function of soil age led to the separation of the biological (≤1 m depth) and geochemical (>1 m) cycles in the old, slowly eroding landscape we investigated, indicating that this separation, commonly observed in tropical and subtropical ecosystems, can also occur in temperate climates. This study is the first to investigate subsurface microbial communities in a long-term chronosequence. Our results highlight connections between soil chemistry and both the aboveground and belowground parts of an ecosystem.

California↗

USGS2009

Microbial disease and the coral holobiont

Tropical coral reefs harbour a reservoir of enormous biodiversity that is increasingly threatened by direct human activities and indirect global climate shifts. Emerging coral diseases are one serious threat implicated in extensive reef deterioration through disruption of the integrity of the coral holobiont – a complex symbiosis between the coral animal, endobiotic alga and an array of microorganisms. In this article, we review our current understanding of the role of microorganisms in coral health and disease, and highlight the pressing interdisciplinary research priorities required to elucidate the mechanisms of disease. We advocate an approach that applies knowledge gained from experiences in human and veterinary medicine, integrated into multidisciplinary studies that investigate the interactions between host, agent and environment of a given coral disease. These approaches include robust and precise disease diagnosis, standardised ecological methods and application of rapidly developing DNA, RNA and protein technologies, alongside established histological, microbial ecology and ecological expertise. Such approaches will allow a better understanding of the causes of coral mortality and coral reef declines and help assess potential management options to mitigate their effects in the longer term.

Trends in Microbiology↗

USGS2024

Mapping development preferences on the perceived value of ecosystem services and land use conflict and compatibility in Greater Kuala Lumpur

Rapid and unplanned development can diminish the social values for ecosystem services associated with urban landscapes. Tropical Global South cities, such as Greater Kuala Lumpur (GKL), Malaysia, that are highly biodiverse, are particularly vulnerable to the fragmentation and loss of natural ecosystems. This study investigates the social values for ecosystem services in GKL, a rapidly urbanising metropolitan area in Southeast Asia and presents the novel application of the SolVES ( Social Values for Ecosystem Services ) tool to an urban area. A public participatory GIS (PPGIS) survey was conducted to assess residents’ development preferences and perceived distribution of social values. The study revealed two groups of respondents, using cluster analysis, each with unique development preferences - a group favouring both green and grey developments and another favouring green development but strongly opposing grey development. The two groups differed statistically in their sociodemographic characteristics, and also how they mapped different social values. Our spatial analysis of their preferences towards future urban expansion in GKL highlighted locations where there is potential for land-use conflict. For example, the favour-balanced-development group tended to value built areas over green spaces. These findings support the need to consider residents’ preferences and socioecological traits through greater public engagement in urban landscape management.

Greater Kuala Lumpur↗

USGS2010

Comparison of transport and attachment behaviors of Cryptosporidium parvum oocysts and oocyst-sized microspheres being advected through three minerologically different granular porous media

In order to gain more information about the fate of Cryptosporidium parvum oocysts in tropical volcanic soils, the transport and attachment behaviors of oocysts and oocyst-sized polystyrene microspheres were studied in the presence of two soils. These soils were chosen because of their differing chemical and physical properties, i.e., an organic-rich (43–46% by mass) volcanic ash-derived soil from the island of Hawaii, and a red, iron (22–29% by mass), aluminum (29–45% by mass), and clay-rich (68–76% by mass) volcanic soil from the island of Oahu. A third agricultural soil, an organic- (13% by mass) and quartz-rich (40% by mass) soil from Illinois, was included for reference. In 10-cm long flow-through columns, oocysts and microspheres advecting through the red volcanic soil were almost completely (98% and 99%) immobilized. The modest breakthrough resulted from preferential flow-path structure inadvertently created by soil-particle aggregation during the re-wetting process. Although a high (99%) removal of oocysts and microsphere within the volcanic ash soil occurred initially, further examination revealed that transport was merely retarded because of highly reversible interactions with grain surfaces. Judging from the slope of the substantive and protracted tail of the breakthrough curve for the 1.8-μm microspheres, almost all (>99%) predictably would be recovered within ∼4000 pore volumes. This suggests that once contaminated, the volcanic ash soil could serve as a reservoir for subsequent contamination of groundwater, at least for pathogens of similar size or smaller. Because of the highly reversible nature of organic colloid immobilization in this soil type, C. parvum could contaminate surface water should overland flow during heavy precipitation events pick up near-surface grains to which they are attached. Surprisingly, oocyst and microsphere attachment to the reference soil from Illinois appeared to be at least as sensitive to changes in pH as was observed for the red, metal-oxide rich soil from Oahu. In contrast, colloidal attachment in the organic-rich, volcanic ash soil was relatively insensitive to changes in pH in spite of the high iron content. Given the fundamental differences in transport behavior of oocyst-sized colloids within the two volcanic soils of similar origin, agricultural practices modified to lessen C. parvum contamination of ground or surface water would necessitate taking the individual soil properties into account.

Water Research↗

USGS2026

Characterizing the annual cycle of steroid hormones in males from an invasive vertebrate (Python bivittatus) of management concern

South Florida's subtropical climate has facilitated the establishment of numerous invasive species, including the Burmese python ( Python bivittatus ). Despite decades of efforts to manage the invasive python population across South Florida, we lack a comprehensive understanding of their reproductive physiology, limiting the development of targeted control strategies. Here, we characterized seasonal patterns of testosterone (T) and corticosterone (CORT) in free-ranging adult male pythons and evaluated environmental correlates of hormone variation. Results indicate that T peaks before the onset of the breeding season and declines through the season to baseline levels in the non-breeding season. CORT did not show a clear seasonal trend but showed greater variability during the breeding season. These findings reveal that photoperiod and ambient temperature are key environmental correlates of male hormone cycles, contributing to our understanding of the endocrine phenology of a tropical ectotherm in a novel environment.

Florida↗