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At least 865 records · Page 48Linked to original sources

USGS2010

Freshwater bacteria are stoichiometrically flexible with a nutrient composition similar to seston

Although aquatic bacteria are assumed to be nutrient-rich, they out-compete other foodweb osmotrophs for nitrogen (N) and phosphorus (P) an apparent contradiction to resource ratio theory. This paradox could be resolved if aquatic bacteria were demonstrated to be nutrient-poor relative other portions of the planktonic food web. In a survey of >120 lakes in the upper Midwest of the USA, the nutrient content of bacteria was lower than previously reported and very similar to the Redfield ratio, with a mean biomass composition of 102:12:1 (C:N:P). Individual freshwater bacterial isolates grown under P-limiting and P-replete conditions had even higher C:P and N:P ratios with a mean community biomass composition ratio of 875C:179N:1P suggesting that individual strains can be extremely nutrient-poor, especially with respect to P. Cell-specific measurements of individual cells from one lake confirmed that low P content could be observed at the community level in natural systems with a mean biomass composition of 259C:69N:1P. Variability in bacterial stoichiometry is typically not recognized in the literature as most studies assume constant and nutrient-rich bacterial biomass composition. We present evidence that bacteria can be extremely P-poor in individual systems and in culture, suggesting that bacteria in freshwater ecosystems can either play a role as regenerators or consumers of inorganic nutrients and that this role could switch depending on the relationship between bacterial biomass stoichiometry and resource stoichiometry. This ability to switch roles between nutrient retention and regeneration likely facilitates processing of terrestrial organic matter in lakes and rivers and has important implications for a wide range of bacterially mediated biogeochemical processes.

Frontiers in Microbiology↗

USGS2022

How beavers are changing Arctic landscapes and Earth’s climate

Beavers build dams that change the way water moves between streams, lakes, and the land. In Alaska, beavers are moving north from the forests into the Arctic tundra. When beavers build dams in the Arctic, they cause frozen soil, called permafrost, to thaw. Scientists are studying how beavers and the thawing of permafrost are impacting streams and rivers in Alaska’s national parks. For example, permafrost thaw from beavers can add harmful substances like mercury to streams. Mercury can be taken up by stream food webs, including fish, which then become unhealthy to eat. Permafrost thaw can also move carbon (from dead plants) to beaver ponds. When this carbon decomposes, it can be released from beaver ponds into the air as greenhouse gases, which cause Earth’s climate to warm. Scientists are trying to keep up with these busy beavers to better understand how they are changing Arctic landscapes and Earth’s climate.

Alaska↗

USGS2022

Fish ear stones offer climate change clues in Alaska's lakes

Otoliths, also known as ear stones, are small body parts that help fish with hearing and balance. Like tree rings, otoliths form one light and one dark band per year, creating rings. These rings can be measured to understand fish growth. The wider the ring, the greater the growth. In our study, we used otoliths to understand how one fish species—lake trout—responds to rising temperature in the state of Alaska. We found that warmer spring air temperature and earlier lake ice melt were related to faster lake trout growth. This finding is consistent with other studies that link warmer water temperature and earlier lake ice melt to increased plankton in Alaska’s lakes. Together, these findings suggest that climate-driven increases at the bottom of the food web might benefit top predators like lake trout. However, the relationship between warmer temperature and faster growth may not last.

Alaska↗

USGS2024

Freshwater mussel viromes increase rapidly in diversity and abundance when hosts are released from captivity into the wild

Freshwater mussels create habitat, filter water, and enhance food webs, but they are also among the world’s most imperiled taxa. Conservation efforts largely rely on captive propagation in which mussels are grown in protected aquaculture environments (hatcheries) for later release. Recent evidence has highlighted the importance of pathogens in population losses of freshwater mussels. In response to ongoing mass mortality events of freshwater mussels in the Upper Tennessee River Basin in Virginia and Tennessee, USA, we conducted a multi-year study to document viruses across multiple restoration sites and compare them to viruses in mussels from the hatchery. Viral communities changed greatly after mussels were released. Of the 681 viruses of the 27 families we documented, only 20 viruses were found exclusively in hatchery mussels, compared to 451 viruses found only in mussels stocked to the wild. After release, mussels rapidly acquired new viruses, and the number of viruses increased steadily over time. These findings have implications for how mussel introduction programs might be managed for greater success, for example, by incorporating acclimatization periods prior to full release.

Tennessee, Virgnia↗

USGS2025

Sampling dragonflies for mercury analysis in Grand Canyon National Park, 2018–2024: A contribution of the Dragonfly Mercury Project

The Dragonfly Mercury Project is a collaborative initiative that utilizes dragonfly larvae as biosentinels to monitor mercury concentrations across 180 national parks and other protected lands, including Grand Canyon National Park (GRCA). These indicators serve as surrogates for environmental risk and can indicate where fish consumption could pose health risks through exposure to mercury. From 2018–2024, citizen scientists and staff from the National Park Service and U.S. Geological Survey helped collect close to 400 larvae from 25 GRCA sites across nearly 300 river miles, revealing mercury concentrations ranging 3.0–1337 ng/g (parts per billion) dry weight. Results were available for 20 sites. Upon comparing mercury concentrations to an impairment index, most sites were classified as low or no risk for ecological impairment, though 10% (2 sites) exceeded moderate or severe risk benchmarks (Pete’s Pocket and Buck Farm Canyon, respectively). Sources of mercury to GRCA likely stem from a combination of atmospheric deposition, upstream discharge from Lake Powell, and other watershed contributions. In addition, food web dynamics, underlying water chemistry, and environmental disturbances (e.g., floods) contribute to mercury mobilization, production, and bioaccumulation. Report findings provide a baseline for connecting ongoing science in the Colorado River watershed, informing management actions, and enhancing public engagement through citizen science.

Arizona↗

USGS2022

Adaptive management framework and decision support tool for invasive annual bromes in seven Northern Great Plains National Park Service units

National Park Service (NPS) units in the northern Great Plains (NGP) were established to preserve and interpret the history of the United States, protect and showcase unusual geology and paleontology, and provide a home for vanishing large wildlife. A unifying feature among these national parks, monuments, and historic sites is northern mixed-grass prairie, which not only provides background scenery and habitat but is the foundation of many park missions. As recognition of the prairie’s importance to park fundamental resources and values has grown, so too has the realization that invasive plants threaten these values by reducing native species diversity, altering food webs, and marring the visitor experience. Cheatgrass ( Bromus tectorum ) and Japanese brome ( Bromus japonicus )—collectively referred to as “annual bromes”—are of particular concern because of their documented increase through time, and their association with lower native plant diversity, in NGP parks. A variety of grazing, herbicide-application, and prescribed-fire experiments have shown promising short-term results for controlling annual bromes in research-scale plots in the NGP, but it is unclear whether these management actions will be as effective at the larger spatial and longer temporal scales relevant to park management. When uncertainties about the effectiveness of different management actions cannot be answered with traditional research approaches in time to prevent resource degradation, yet recurrent management decisions must be made, an adaptive management approach may be appropriate. Thus, in 2017, we began to develop the ABAM—Annual Brome Adaptive Management—framework. The aim of this framework is to reduce uncertainties about methods for controlling annual bromes in seven NGP parks through a formal process of learning from the application of on-going management. A uniform framework across seven parks provides greater opportunities for reducing these uncertainties compared to a single park acting alone or to multiple parks using different adaptive management frameworks. This technical report details the development and expected implementation of the ABAM framework. After briefly introducing the issue (Section 1) and describing the context in which the framework was developed (Section 2), the report describes how a structured decision-making process was used to frame the problem, determine concrete objectives, and decide the alternative actions for achieving those objectives that the framework would be designed around (Section 3). Then the report describes the process used to develop the ABAM decision support system (Section 4). At the core of this system is the ABAM decision support tool, a Bayesian decision network built on nearly two decades of vegetation monitoring data from NGP parks, as well as current literature and ABAMspecific experiments. This tool, referred to as the ABAM model by its intended users, is built to work with the existing vegetation monitoring, prescribed fire, and invasive plant management programs that support the seven ABAM parks. In Section 5, the report describes how output from the ABAM model is produced and used in annual vegetation management decision making. It describes the ABAM R package (Baldwin et al. 2021) and an example R script that leads a user through an annual workflow using the model and the package. This workflow updates the model with information from new monitoring events following management actions of prescribed fire, herbicide application, or a combination thereof. With the updated model, data describing the current condition of vegetation in park management units, and current data for environmental factors included in the model (soil texture, slope, weather, and grazing), the user then runs the model to predict future vegetation conditions—and managers’ happiness with the outcome—in response to each of 10 management actions for each management unit in each park. These predictions inform managers’ decisions regarding locations and types of management actions to apply in the upcoming year. The ABAM framework is in its infancy, and the report concludes (Section 6) with a discussion of its longer-term viability. Successful adaptive management requires commitment for the long term, likely decades. Currently, the predictions of the decision support tool are not expected to be highly accurate, but they ideally will improve over time as more management actions are applied and their outcomes are captured by monitoring. We designed the ABAM decision support tool to work with the existing management and monitoring resources in ABAM parks to maximize the sustainability of the model’s use, but the ABAM framework requires more than the model. Because this application of an adaptive management framework supported by a quantitative decision support tool to guide vegetation management is unique within the NPS (to our knowledge), institutional knowledge and mechanisms for long-term implementation of the ABAM framework do not exist within the agency. Additionally, the ABAM model and the data that inform it could be improved in a variety of ways. Thus, this report concludes with a discussion of ways to both sustain and improve upon the work completed so far.

Montana, Nebraska, South Dakota, Wyoming↗

USGS2019

Parasitic nematodes of marine fishes from Palmyra Atoll, East Indo-Pacific, including a new species of Spinitectus (Nematoda, Cystidicolidae)

Here, we present the results of a taxonomic survey of the nematodes parasitizing fishes from the lagoon flats of Palmyra Atoll, Eastern Indo-Pacific. We performed quantitative parasitological surveys of 653 individual fish from each of the 44 species using the intertidal sand flats that border the atoll’s lagoon. We provide morphological descriptions, prevalence, and mean intensities of the recovered seven species of adult nematode ( Pulchrascaris chiloscyllii , Capillariidae gen. sp., Cucullanus bourdini, Cucullanus oceaniensis, Pseudascarophis sp., Spinitectus (Paraspinitectus) palmyraensis sp. nov., Philometra pellucida ) and three larval stages ( Pulchrascaris sp., Hysterothylacium sp., Cucullanus sp.). We recorded: Pulchrascaris chiloscyllii from Carcharhinus melanopterus ; Capillariidae gen. sp. from Chaetodon lunula, Lutjanus fulvus, and Ellochelon vaigiensis ; Cucullanus bourdin i from Arothron hispidus ; Cucullanus oceaniensis from Abudefduf sordidus ; Pseudascarophis sp. from Chaetodon auriga, Chaetodon lunula, and Mulloidichthys flavolineatus ; Spinitectus ( Paraspinitectus ) palmyraensis sp. nov. from Albula glossodonta ; Philometra pellucida from Arothron hispidus ; and three larval forms, Pulchrascaris sp. from Acanthurus triostegus, Acanthurus xanthopterus, Rhinecanthus aculeatus, Platybelone argalus, Carangoides ferdau, Carangoides orthogrammus, Caranx ignobilis, Caranx melampygus, Caranx papuensis, Chaetodon auriga, Chanos chanos, Amblygobius phalaena, Asterropteryx semipunctata, Valencienea sexguttata, Kyphosus cinerascens, Lutjanus fulvus, Lutjanus monostigma, Ellochelon vaigiensis, Mulloidichthys flavolineatus, Upeneus taeniopterus, Gymnothorax pictus, Abudefduf septemfasciatus, Abudefduf sordidus, and Stegastes nigricans ; Hysterothylacium sp. type MD from Acanthurus triostegus, Carangoides ferdau, Chaetodon lunula, Chanos chanos, Kyphosus cinerascens, Abudefduf sordidus, and Arothron hispidus ; and Cucullanus sp. from Caranx ignobilis . Spinitectus ( Paraspinitectus ) palmyraensis sp. nov. (Cystidicolidae) is described from the intestine of roundjaw bonefish Albula glossodonta . All the nematode species reported in this study represent new geographical records. We discuss how our survey findings compare to other areas of the Indo-Pacific, and the way the relatively numerical dominance of trophically transmitted larval stages likely reflect the intact food web of Palmyra Atoll, which includes a large biomass of large-bodied top predator sharks and ray-finned fishes.

ZooKeys↗

USGS2017

Ecology of the Opossum Shrimp ( Neomysis mercedis ) in a Lower Snake River Reservoir, Washington

The opossum shrimp Neomysis mercedis has expanded its range from the lower Columbia River upstream 695 kilometers into Lower Granite Reservoir where it is now very abundant. We studied Neomysis ecology in the reservoir during 2011–2015 to better understand the physical and biological factors that shape their distribution as well as their potential role in the food web. Benthic densities in offshore habitats ranged from 19 to 145 mysids m -2 in shallow (2–12 m) water and from 3 to 48 mysids m -2 in deep (> 12 m) water. Water velocity, depth, substrate, and seasonal interactions were important variables for explaining variation in Neomysis densities in offshore habitats. During spring, daytime densities in shoreline habitats (< 2 m deep) were variable, but nighttime densities generally decreased in summer following reproduction and as temperatures approached 23 °C. Neomysis were mainly collected from the water column during nighttime vertical tows in the downstream end of the reservoir when water velocities were low during summer and autumn. Reproduction occurred mainly in spring and early summer, but a second, smaller reproductive event was observed during autumn. The diet of Neomysis consisted primarily of detritus, rotifers, and copepods, but cladocerans were more prominent during summer and autumn. Physical factors like water velocity may have limited vertical migrations of Neomysis to feed in the water column and influenced use of different habitats in the reservoir. Neomysis are prey for a number of species, including juvenile salmon, but their relations are still largely unknown, and continued monitoring and research is warranted.

Washington↗

USGS2013

Size-dependent trophic patterns of pallid sturgeon and shovelnose sturgeon in a large river system

This study compared patterns of δ 15 N and δ 13 C enrichment of pallid sturgeon Scaphirhynchus albus and shovelnose sturgeon S. platorynchus in the Missouri River, United States, to infer their trophic position in a large river system. We examined enrichment and energy flow for pallid sturgeon in three segments of the Missouri River (Montana/North Dakota, Nebraska/South Dakota, and Nebraska/Iowa) and made comparisons between species in the two downstream segments (Nebraska/South Dakota and Nebraska/Iowa). Patterns in isotopic composition for pallid sturgeon were consistent with gut content analyses indicating an ontogenetic diet shift from invertebrates to fish prey at sizes of >500-mm fork length (FL) in all three segments of the Missouri River. Isotopic patterns revealed shovelnose sturgeon did not experience an ontogenetic shift in diet and used similar prey resources as small (<500-mm FL) pallid sturgeon in the two downstream segments. We found stable isotope analysis to be an effective tool for evaluating the trophic position of sturgeons within a large river food web.

Missouri River↗

USGS2010

The aquatic turtle assemblage inhabiting a highly altered landscape in southeast Missouri

Turtles are linked to energetic food webs as both consumers of plants and animals and prey for many species. Turtle biomass in freshwater systems can be an order of magnitude greater than that of endotherms. Therefore, declines in freshwater turtle populations can change energy transfer in freshwater systems. Here we report on a mark–recapture study at a lake and adjacent borrow pit in a relict tract of bottomland hardwood forest in the Mississippi River floodplain in southeast Missouri, which was designed to gather baseline data, including sex ratio, size structure, and population size, density, and biomass, for the freshwater turtle population. Using a variety of capture methods, we captured seven species of freshwater turtles (snapping turtle Chelydra serpentina ; red-eared slider Trachemys scripta ; southern painted turtle Chrysemys dorsalis ; river cooter Pseudemys concinna ; false map turtle Graptemys pseudogeographica ; eastern musk turtle Sternotherus odoratus ; spiny softshell Apalone spinifera ) comprising four families (Chelydridae, Emydidae, Kinosternidae, Trinoychidae). With the exception of red-eared sliders, nearly all individuals captured were adults. Most turtles were captured by baited hoop-nets, and this was the only capture method that caught all seven species. The unbaited fyke net was very successful in the borrow pit, but only captured four of the seven species. Basking traps and deep-water crawfish nets had minimal success. Red-eared sliders had the greatest population estimate (2,675), density (205/ha), and biomass (178 kg/ha). Two species exhibited a sex-ratio bias: snapping turtles C. serpentina in favor of males, and spiny softshells A. spinifera in favor of females.

Missouri↗

USGS2022

Abundance and distribution of large thecosome pteropods in the northern Gulf of Mexico

The ecological role of large thecosome pteropods in the pelagic ecosystem of the northern Gulf of Mexico (GoM) may be substantial, both in the food web and biogeochemical cycling. We analyzed species abundances, vertical and horizontal distributions of large species with calcareous shells (those collected in 3-mm mesh nets). Pteropod samples were collected following the 2010 Deepwater Horizon oil (DWH) spill by two midwater sampling programs: the Offshore Nekton Sampling and Analysis Program (ONSAP 2011) and the Deep Pelagic Nekton Dynamics of the Gulf of Mexico ( DEEPEND 2015 ) projects. All samples were collected using a 10-m 2 Multiple Opening/Closing Net and Environmental Sensing System (MOC10) midwater trawl, with 3-mm mesh. This gear sampled five discrete depths between 0–1500 m. Over 13,000 pteropod specimens were examined, with 25 species identified. Clio pyramidata Linnaeus 1767 was the most abundant species during both collection periods. Five genera ( Diacria, Clio, Styliola, Cuvierina, Cavolinia ) demonstrated diel vertical migration from the mesoto epipelagic zone.

American Malacological Bulletin↗

USGS2011

An experimental analysis of harmful algae-zooplankton interactions and the ultimate defense

W We examined effects of the invasive, toxigenic haptophyte Prymnesium parvum on grazing rates, feeding behaviors, and life‐history characteristics of clonal lineages of three daphniid zooplankton species. Grazing experiments revealed similar clearance rates for P. parvum and a common green alga. Behavioral observations revealed no significant effects of P. parvum on daphniid feeding behaviors after 30 min, but major declines in appendage beat rates after 1 h. Chronic exposure (10 d) to P. parvum resulted in severe reductions in daphniid growth rates, age at first reproduction, fecundity, and survivorship at densities as low as 7750 cells mL −1 . Thus, in addition to direct fish mortality during P. parvum blooms of 50,000–200,000 cells mL −1 , the entire food web of an invaded system may be subjected to potentially severe negative consequences even at nonbloom densities of P. parvum .

Limnology and Oceanography↗

USGS2011

Feeding ecology and energetics

Successful management of walleye and sauger populations often requires a detailed knowledge of prey resources. As with many fishes, diets of juvenile Sander spp. are often different than those of adult fish and can have important implications for growth and survival. Similarly, spatial and temporal variation in diet composition can contribute to variation in growth and production of Sander populations. Thus, management efforts (e.g., stocking) aimed at enhancing walleye and sauger populations benefit from the knowledge and tools to effectively quantify feeding patterns. Today, fisheries managers face a myriad of challenges posed by nonnative species, eutrophication, climate change, and water availability, to name just a few. As a result, knowledge about prey use, energetics, and effects of Sander populations on food web structure has increased dramatically in the last 30 years. Experimental work with larval and juvenile walleyes has provided new insights into factors affecting growth and survival during early life stages (see Chapter 7) that has benefitted management and propagation efforts. Similarly, contemporary analytical approaches, such as bioenergetics modeling and stable isotope analysis, have improved our understanding of walleye foraging behavior and provided new tools for exploring trophic interactions. In this chapter, we review the general feeding ecology of walleye and sauger and highlight contemporary approaches for quantifying energy acquisition and trophic interactions.

Book chapter↗

USGS2020

A new decision support tool for collaborative adaptive vegetation management in northern Great Plains national parks

National Park Service (NPS) units in the northern Great Plains (NGP) were established to preserve and interpret the history of America, protect and showcase unusual geology and paleontology, and provide a home for vanishing large wildlife. A unifying feature among these national parks, monuments, and historic sites is mixed-grass prairie, which not only provides background scenery but is the very foundation of many park missions. As recognition of the prairie’s importance to park fundamental resources and values has grown, so too has the realization that invasive plants threaten these values by reducing native species diversity, altering food webs, and marring the visitor experience. Parks manage invasive species despite uncertainties in treatment effectiveness because management cannot wait for research to provide definitive answers. Under these circumstances, adaptive management (AM) is an appropriate approach. In the NGP, we formed a collaborative adaptive vegetation management team to apply AM towards reducing invasive species (with a focus on exotic annual grasses) and improving native vegetation conditions. In our AM framework, the team uses a Bayesian model built from NPS Inventory & Monitoring and Fire Effects monitoring data and experimental results to predict the effects of management actions on park management units, according to those units’ vegetation condition and management history. These predictions inform management decisions, which are then applied.

Parks Stewardship Forum↗

USGS2015

Reviews and syntheses: Effects of permafrost thaw on Arctic aquatic ecosystems

The Arctic is a water-rich region, with freshwater systems covering about 16 % of the northern permafrost landscape. Permafrost thaw creates new freshwater ecosystems, while at the same time modifying the existing lakes, streams, and rivers that are impacted by thaw. Here, we describe the current state of knowledge regarding how permafrost thaw affects lentic (still) and lotic (moving) systems, exploring the effects of both thermokarst (thawing and collapse of ice-rich permafrost) and deepening of the active layer (the surface soil layer that thaws and refreezes each year). Within thermokarst, we further differentiate between the effects of thermokarst in lowland areas vs. that on hillslopes. For almost all of the processes that we explore, the effects of thaw vary regionally, and between lake and stream systems. Much of this regional variation is caused by differences in ground ice content, topography, soil type, and permafrost coverage. Together, these modifying factors determine (i) the degree to which permafrost thaw manifests as thermokarst, (ii) whether thermokarst leads to slumping or the formation of thermokarst lakes, and (iii) the manner in which constituent delivery to freshwater systems is altered by thaw. Differences in thaw-enabled constituent delivery can be considerable, with these modifying factors determining, for example, the balance between delivery of particulate vs. dissolved constituents, and inorganic vs. organic materials. Changes in the composition of thaw-impacted waters, coupled with changes in lake morphology, can strongly affect the physical and optical properties of thermokarst lakes. The ecology of thaw-impacted lakes and streams is also likely to change; these systems have unique microbiological communities, and show differences in respiration, primary production, and food web structure that are largely driven by differences in sediment, dissolved organic matter, and nutrient delivery. The degree to which thaw enables the delivery of dissolved vs. particulate organic matter, coupled with the composition of that organic matter and the morphology and stratification characteristics of recipient systems will play an important role in determining the balance between the release of organic matter as greenhouse gases (CO 2 and CH 4 ), its burial in sediments, and its loss downstream. The magnitude of thaw impacts on northern aquatic ecosystems is increasing, as is the prevalence of thaw-impacted lakes and streams. There is therefore an urgent need to quantify how permafrost thaw is affecting aquatic ecosystems across diverse Arctic landscapes, and the implications of this change for further climate warming.

Biogeosciences↗

USGS2018

Use of flow cytometry and stable isotope analysis to determine phytoplankton uptake of wastewater derived ammonium in a nutrient-rich river

Anthropogenic alteration of the form and concentration of nitrogen (N) in aquatic ecosystems is widespread. Understanding availability and uptake of different N sources at the base of aquatic food webs is critical to establishment of effective nutrient management programs. Stable isotopes of N ( 14 N, 15 N) are often used to trace the sources of N fueling aquatic primary production, but effective use of this approach requires obtaining a reliable isotopic ratio for phytoplankton. In this study, we tested the use of flow cytometry to isolate phytoplankton from bulk particulate organic matter (POM) in a portion of the Sacramento River, California, during river-scale nutrient manipulation experiments that involved halting wastewater discharges high in ammonium (NH 4 + ). Field samples were collected using a Lagrangian approach, allowing us to measure changes in phytoplankton N source in the presence and absence of wastewater-derived NH 4 + . Comparison of δ 15 N-POM and δ 15 N-phytoplankton ( δ 15 N-PHY) revealed that their δ 15 N values followed broadly similar trends. However, after 3 days of downstream travel in the presence of wastewater treatment plant (WWTP) effluent, δ 15 N-POM and δ 15 N-PHY in the Sacramento River differed by as much as 7 ‰. Using a stable isotope mixing model approach, we estimated that in the presence of effluent between 40 and 90 % of phytoplankton N was derived from NH 4 + after 3 days of downstream transport. An apparent gradual increase over time in the proportion of NH 4 + in the phytoplankton N pool suggests that either very low phytoplankton growth rates resulted in an N turnover time that exceeded the travel time sampled during this study, or a portion of the phytoplankton community continued to access nitrate even in the presence of elevated NH 4 + concentrations.

California↗

USGS2016

Effects of microhabitat and large-scale land use on stream salamander occupancy in the coalfields of Central Appalachia

Large-scale coal mining practices, particularly surface coal extraction and associated valley fills as well as residential wastewater discharge, are of ecological concern for aquatic systems in central Appalachia. Identifying and quantifying alterations to ecosystems along a gradient of spatial scales is a necessary first-step to aid in mitigation of negative consequences to aquatic biota. In central Appalachian headwater streams, apart from fish, salamanders are the most abundant vertebrate predator that provide a significant intermediate trophic role linking aquatic and terrestrial food webs. Stream salamander species are considered to be sensitive to aquatic stressors and environmental alterations, as past research has shown linkages among microhabitat parameters, large-scale land use such as urbanization and logging, and salamander abundances. However, there is little information examining these relationships between environmental conditions and salamander occupancy in the coalfields of central Appalachia. In the summer of 2013, 70 sites (sampled two to three times each) in the southwest Virginia coalfields were visited to collect salamanders and quantify stream and riparian microhabitat parameters. Using an information-theoretic framework, effects of microhabitat and large-scale land use on stream salamander occupancy were compared. The findings indicate that Desmognathus spp. occupancy rates are more correlated to microhabitat parameters such as canopy cover than to large-scale land uses. However, Eurycea spp . occupancy rates had a strong association with large-scale land uses, particularly recent mining and forest cover within the watershed. These findings suggest that protection of riparian habitats is an important consideration for maintaining aquatic systems in central Appalachia. If this is not possible, restoration riparian areas should follow guidelines using quick-growing tree species that are native to Appalachian riparian areas. These types of trees would rapidly establish a canopy cover, stabilize the soil, and impede invasive plant species which would, in turn, provide high-quality refuges for stream salamanders.

Journal of Ecology and the Natural Environment↗

USGS2015

Effects of oyster harvest activities on Louisiana reef habitat and resident nekton communities

Oysters are often cited as “ecosystem engineers” because they modify their environment. Coastal Louisiana contains extensive oyster reef areas that have been harvested for decades, and whether differences in habitat functions exist between those areas and nonharvested reefs is unclear. We compared reef physical structure and resident community metrics between these 2 subtidal reef types. Harvested reefs were more fragmented and had lower densities of live eastern oysters ( Crassostrea virginica ) and hooked mussels ( Ischadium recurvum ) than the nonharvested reefs. Stable isotope values ( 13 C and 15 N) of dominant nekton species and basal food sources were used to compare food web characteristics. Nonpelagic source contributions and trophic positions of dominant species were slightly elevated at harvested sites. Oyster harvesting appeared to have decreased the number of large oysters and to have increased the percentage of reefs that were nonliving by decreasing water column filtration and benthopelagic coupling. The differences in reef matrix composition, however, had little effect on resident nekton communities. Understanding the thresholds of reef habitat areas, the oyster density or oyster size distribution below which ecosystem services may be compromised, remains key to sustainable management.

Louisiana↗