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At least 865 records · Page 48Linked to original sources

Using occupancy models of forest breeding birds to prioritize conservation planning

As urban development continues to encroach on the natural and rural landscape, land-use planners struggle to identify high priority conservation areas for protection. Although knowing where urban-sensitive species may be occurring on the landscape would facilitate conservation planning, research efforts are often not sufficiently designed to make quality predictions at unknown locations. Recent advances in occupancy modeling allow for more precise estimates of occupancy by accounting for differences in detectability. We applied these techniques to produce robust estimates of habitat occupancy for a subset of forest breeding birds, a group that has been shown to be sensitive to urbanization, in a rapidly urbanizing yet biological diverse region of New York State. We found that detection probability ranged widely across species, from 0.05 to 0.8. Our models suggest that detection probability declined with increasing forest fragmentation. We also found that the probability of occupancy of forest breeding birds is negatively influenced by increasing perimeter-area ratio of forest fragments and urbanization in the surrounding habitat matrix. We capitalized on our random sampling design to produce spatially explicit models that predict high priority conservation areas across the entire region, where interior-species were most likely to occur. Finally, we use our predictive maps to demonstrate how a strict sampling design coupled with occupancy modeling can be a valuable tool for prioritizing biodiversity conservation in land-use planning. ?? 2009 Elsevier Ltd.

Biological Conservation↗

Heterogeneous movement of insectivorous Amazonian birds through primary and secondary forest: A case study using multistate models with radiotelemetry data

Given rates of deforestation, disturbance, and secondary forest accumulation in tropical rainforests, there is a great need to quantify habitat use and movement among different habitats. This need is particularly pronounced for animals most sensitive to disturbance, such as insectivorous understory birds. Here we use multistate capture–recapture models with radiotelemetry data to determine the successional stage at which within-day movement probabilities of Amazonian birds in secondary forest are similar to those in primary forest. We radio-tracked three common understory insectivore species in primary and secondary forest at the Biological Dynamics of Forest Fragments project near Manaus, Brazil: two woodcreepers, Glyphorynchus spirurus ( n = 19) and Xiphorhynchus pardalotus ( n = 18), and the terrestrial antthrush Formicarius colma ( n = 19 ) . Forest age was a strong predictor of fidelity to a given habitat. All three species showed greater fidelity to primary forest than to 8–14-year-old secondary forest, indicating the latter’s relatively poor quality. The two woodcreeper species used 12–18-year-old secondary forest in a manner comparable to continuous forest, but F . colma avoided moving even to 27–31-year-old secondary forest—the oldest at our site. Our results suggest that managers concerned with less sensitive species can assume that forest reserves connected by 12–18-year-old secondary forest corridors are effectively connected. On the other hand, >30 years are required after land abandonment before secondary forest serves as a primary forest-like conduit for movement by F . colma ; more sensitive terrestrial insectivores may take longer still.

Manaus↗

Concentrations and time trends of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) in aquatic bird eggs from San Francisco Bay, CA 2000-2003

Concentrations of polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) were measured in 169 avian eggs. We analyzed randomly collected eggs of two species of piscivorous birds: Caspian tern (Sterna caspia) (n = 78) and Forster's tern (Sterna forsteri) (n = 76). We also analyzed fail-to-hatch eggs from two species protected under the Federal Endangered Species Act of 1973, that breed in the San Francisco Bay region: the piscivorous California Least tern (Sterna antillarum brownii) (n = 11) and the omnivorous California Clapper rail (Rallus longirostris obsoletus) (n = 4). San Francisco Bay eggs were collected annually for four years (2000-2003), and additional 20 eggs were collected and analyzed from Gray's Harbor, Washington in 2001. Geometric mean PBDE concentrations did not significantly differ in the three tern species, but concentrations in eggs from the fail to hatch California Clapper rail eggs were significantly lower than those found in the randomly collected tern eggs. Median concentrations of ???PBDEs in Caspian tern eggs for 2000-2003 were 2410, 4730, 3720 and 2880 ng/g lipid weight (lw), respectively, in Forster's terns 1820, 4380, 5460 and 3600 ng/g lw, respectively, and in California Least terns for 2001 and 2002 were 5060 and 5170 ng/g lw, respectively. In contrast, median ???PBDEs concentration in California Clapper rail eggs for 2001 was 379 ng/g lw. Five PBDEs were the major congeners found and decreased in the order BDE-47, -99, -100, -153, and -154. BDE-32, -28, -71, -66, -85, -183 were less prevalent, minor congeners, as was BDE-209, which was measured in a subset of samples. PBDE concentrations in bird eggs from San Francisco Bay were site related. There was no significant difference in PBDE concentrations in Caspian tern eggs from San Francisco Bay and Gray's Harbor, WA. Average PBDE concentrations in eggs did not significantly increase over the period 2000-2003. ?? 2008 Elsevier Ltd. All rights reserved.

Chemosphere↗

Bird migration and energetics simulations incorporating oil spill effects

Oil spills are well-known for causing acute mortality of birds, but sublethal and delayed impacts are less understood. Focusing on the mallard ( Anas platyrhynchos ), we used simulation modeling to explore how sublethal oiling may affect avian survival and breeding ground body condition. We used empirically informed migration and energetics simulations to model hypothetical spills occurring in northern Arkansas, USA occurring in either January to simulate thermoregulatory stress or March to simulate pre-migration effects. We modeled trace and lightly oiled female mallards (≤5% or 6 to 20% of feather area oiled, respectively), incorporating oiling-induced energetic effects on thermoregulation, flight, and energetic gain. We found that mortality was generally higher for simulated spills occurring in January versus March. In the simulations, mallards lost body mass due to oiling, but surviving individuals could partially recover body mass before arriving at the breeding grounds. Including oiling-induced energetic gain effects in simulations increased mortality as well as increased overall variability of simulation results. This modeling effort identified an important gap in knowledge regarding oiled bird energetics, specifically a need to better quantify oiling-induced energetic gain changes. Although the model is currently limited to a specific species and geographic area, it serves as a proof-of-concept for future research and modeling efforts aimed at understanding more broadly the impacts of oil spills on avian populations.

Prairie Pothole region↗

Maternal transfer of contaminants in birds: Mercury and selenium concentrations in parents and their eggs

We conducted a detailed assessment of the maternal transfer of mercury and selenium to eggs in three bird species ( n = 107 parents and n = 339 eggs), and developed predictive equations linking contaminant concentrations in eggs to those in six tissues of the mother (blood, muscle, liver, kidney, breast feathers, and head feathers). Mercury concentrations in eggs were positively correlated with mercury concentrations in each of the mother's internal tissues ( R 2 ≥ 0.95), but generally not with feathers. For each species, the proportion of mercury transferred to eggs decreased as mercury concentrations in the mother increased. At the same maternal mercury concentration, the proportion of mercury transferred to eggs differed among species, such that Forster's tern ( Sterna forsteri ) and black-necked stilt ( Himantopus mexicanus ) females transferred more methylmercury to their eggs than American avocet ( Recurvirostra americana ) females. Selenium concentrations in eggs also were correlated with selenium concentrations in the mother's liver ( R 2 = 0.87). Furthermore, mercury and selenium concentrations in tern eggs were positively correlated with those in the father ( R 2 = 0.84). Incubating male terns had 21% higher mercury concentrations in blood compared to incubating females at the same egg mercury concentration. We provide equations to predict contaminant concentrations in eggs from each of the commonly sampled bird tissues.

Environmental Pollution↗

Projected long-term response of Southeastern birds to forest management

Numerous studies have explored the influence of forest management on avian communities empirically, but uncertainty about causal relationships between landscape patterns and temporal dynamics of bird communities calls into question how observed historical patterns can be projected into the future, particularly to assess consequences of differing management alternatives. We used the Habplan harvest scheduler to project forest conditions under several management scenarios mapped at 5-year time steps over a 40-year time span. We used empirical models of overall avian richness, richness of selected guilds, and probability of presence for selected species to predict avian community characteristics for each of the mapped landscapes generated for each 5-year time step for each management scenario. We then used time series analyses to quantify relationships between changes in avian community characteristics and management-induced changes to forest landscapes over time. Our models of avian community and species characteristics indicated habitat associations at multiple spatial scales, although landscape-level measures of habitat were generally more important than stand-level measures. Our projections showed overall avian richness, richness of Neotropical migrants, and the presence of Blue-gray Gnatcatchers and Eastern Wood-pewees varied little among management scenarios, corresponding closely to broad, overall landscape changes over time. By contrast, richness of canopy nesters, richness of cavity nesters, richness of scrub-successional associates, and the presence of Common Yellowthroats showed high temporal variability among management scenarios, likely corresponding to short-term, fine-scale changes in the landscape. Predicted temporal variability of both interior-forest and early successional birds was low in the unharvested landscape relative to that in the harvested landscape. Our results also suggested that early successional species can be sensitive to both availability and connectivity of habitat on the landscape. To increase or maintain the avian diversity, our projections indicate that forest managers need to consider landscape-scale configuration of stands, maintaining a spatially heterogeneous distribution of age classes. Our findings suggest which measures of richness or species presence may be appropriate indicators for monitoring effects of forest management on avian communities, depending on management objectives.

Forest Ecology and Management↗

Breeding birds in managed forests on public conservation lands in the Mississippi Alluvial Valley

Managers of public conservation lands in the Mississippi Alluvial Valley have implemented forest management strategies to improve bottomland hardwood habitat for target wildlife species. Through implementation of various silvicultural practices, forest managers have sought to attain forest structural conditions (e.g., canopy cover, basal area, etc.) within values postulated to benefit wildlife. We evaluated data from point count surveys of breeding birds on 180 silviculturally treated stands (1049 counts) that ranged from 1 to 20 years post-treatment and 134 control stands (676 counts) that had not been harvested for >20 years. Birds detected during 10-min counts were recorded within four distance classes and three time intervals. Avian diversity was greater on treated stands than on unharvested stands. Of 42 commonly detected species, six species including Prothonotary Warbler ( Prothonotaria citrea ) and Acadian Flycatcher ( Empidonax virescens ) were indicative of control stands. Similarly, six species including Indigo Bunting ( Passerina cyanea ) and Yellow-breasted Chat ( Icteria virens ) were indicative of treated stands. Using a removal model to assess probability of detection, we evaluated occupancy of bottomland forests at two spatial scales (stands and points within occupied stands). Wildlife-forestry treatment improved predictive models of species occupancy for 18 species. We found years post treatment (range = 1–20), total basal area, and overstory canopy were important species-specific predictors of occupancy, whereas variability in basal area was not. In addition, we used a removal model to estimate species-specific probability of availability for detection, and a distance model to estimate effective detection radius. We used these two estimated parameters to derive species densities and 95% confidence intervals for treated and unharvested stands. Avian densities differed between treated and control stands for 16 species, but only Common Yellowthroat ( Geothlypis trichas ) and Yellow-breasted Chat had greater densities on treated stands.

Mississippi Alluvial Valley↗

Habitat associations of breeding conifer-associated birds in managed and regenerating forested stands

Forests are often affected by management that could influence demographics of breeding and post-breeding birds that reside within. Numerous studies have focused on immediate effects from management on wildlife soon after forestry treatment (e.g., 0–5 years), however, fewer studies have examined changes in focal species abundance over longer durations as a forest regenerates after disturbance. We examined how forest management influenced 18 conifer-associated birds during breeding and post-breeding over the forest regeneration period in a landscape dominated by forestry. To achieve this, we paired avian detection data from point count surveys in lowland conifer and mixed-wood forests with Bayesian distance-removal models and an information-theoretic framework. We estimated abundance and associations with seven common forestry treatment categories applied at the stand scale, years-since-harvest (YSH; 5–120+), and seven vegetation variables measured within stands. Forestry treatment categories and YSH were poor predictors of abundance, and none of the 14 species with good-fitting models had associations with these covariates. Twelve of 13 species with good-fitting models had important associations between abundance and vegetation variables. All vegetation variables were associated with abundance of some species, irrespective of the forestry treatment in which the site occurred, including spruce-fir tree composition (seven species), tree basal area (six species), midstory cover (five species), live crown ratio (three species), shrub cover (three species), tree diameter at breast height (two species), and shrub composition (one species). In a companion study, several species assemblages were associated with vegetation variables (i.e., spruce-fir tree composition, tree basal area, and tree diameter at breast height) that varied with YSH and forestry treatments, suggesting that some forestry treatments may indirectly influence avian abundance when certain vegetation outcomes are achieved. Our results suggest that managers should target species-specific vegetation outcomes rather than more broadly categorized forestry treatment types when managing for individual focal species because of large variations in vegetative outcomes across stands within a forest treatment category. Our study informs management and conservation of biodiversity in regions such as the Atlantic Northern Forest where commercial forestry is the dominant human land use.

Maine, New Hampshire, Vermont↗

Prevalence and genetic diversity of haematozoa in South American waterfowl and evidence for intercontinental redistribution of parasites by migratory birds

To understand the role of migratory birds in the movement and transmission of haematozoa within and between continental regions, we examined 804 blood samples collected from eleven endemic species of South American waterfowl in Peru and Argentina for infection by Haemoproteus , Plasmodium , and/or Leucocytozono blood parasites. Infections were detected in 25 individuals of six species for an overall apparent prevalence rate of 3.1%. Analysis of haematozoa mitochondrial DNA revealed twelve distinct parasite haplotypes infecting South American waterfowl, four of which were identical to lineages previously observed infecting ducks and swans sampled in North America. Analysis of parasite mitochondrial DNA sequences revealed close phylogenetic relationships between lineages originating from waterfowl samples regardless of continental affiliation. In contrast, more distant phylogenetic relationships were observed between parasite lineages from waterfowl and passerines sampled in South America for Haemoproteus and Leucocytozoon , suggesting some level of host specificity for parasites of these genera. The detection of identical parasite lineages in endemic, South American waterfowl and North American ducks and swans, paired with the close phylogenetic relationships of haematozoa infecting waterfowl on both continents, provides evidence for parasite redistribution between these regions by migratory birds.

International Journal for Parasitology: Parasites ↗

A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells.

H9N2 influenza A viruses are on the list of potentially pandemic subtypes. Therefore, it is important to understand how genomic reassortment and genetic polymorphisms affect phenotypes of H9N2 viruses circulating in the wild bird reservoir. A comparative genetic analysis of North American H9N2 isolates of wild bird origin identified a naturally occurring reassortant virus containing gene segments derived from both North American and Eurasian lineage ancestors. The PB2 segment of this virus encodes 10 amino acid changes that distinguish it from other H9 strains circulating in North America. G590S, one of the 10 amino acid substitutions observed, was present in ~ 12% of H9 viruses worldwide. This mutation combined with R591 has been reported as a marker of pathogenicity for human pandemic 2009 H1N1 viruses. Screening by polymerase reporter assay of all the natural polymorphisms at these two positions identified G590/K591 and S590/K591 as the most active, with the highest polymerase activity recorded for the SK polymorphism. Rescued viruses containing these two polymorphic combinations replicated more efficiently in MDCK cells and they were the only ones tested that were capable of establishing productive infection in NHBE cells. A global analysis of all PB2 sequences identified the K591 signature in six viral HA/NA subtypes isolated from several hosts in seven geographic locations. Interestingly, introducing the K591 mutation into the PB2 of a human-adapted H3N2 virus did not affect its polymerase activity. Our findings demonstrate that a single point mutation in the PB2 of a low pathogenic H9N2 isolate could have a significant effect on viral phenotype and increase its propensity to infect mammals. However, this effect is not universal, warranting caution in interpreting point mutations without considering protein sequence context.

Infection, Genetics and Evolution↗

Long-term trends in abundance and potential drivers for eight species of coastal birds in the U.S. South Atlantic

The U.S. South Atlantic coastal region is used by many marine birds for foraging, reproduction, and migration. We developed standardized indices of relative abundance from long–term (1980–2016), semi-structured monitoring data (eBird) for eight species: Brown Pelican ( Pelecanus occidentalis ), Double-Crested Cormorant ( Nannopterum auritum ), White Ibis ( Eudocimus albus ), Wood Stork ( Mycteria americana ), Piping Plover ( Charadrius melodus ), American Oystercatcher ( Haematopus palliatus ), Clapper Rail ( Rallus crepitans ), and Northern Gannet ( Morus bassanus ). Following a period of stable or declining abundance from the 1980s through the 1990s, most species have shown stable or slightly upward trends through the late 2000s; Brown Pelican and Piping Plover have shown some evidence of recent declines. Species–specific correlations between abundance indices developed from presence/absence data and those developed from count data were positive for all species and ranged from 0.53 to 0.86. Dynamic factor analysis identified common trends in abundance among several species, in particular, Brown Pelican, Double–Crested Cormorant, and White Ibis. Model performance was improved with inclusion of an indicator of sea level rise, but not forage fish abundance or temperature, indicating habitat availability mediated by changing water levels may explain some of the underlying abundance trends. Our results provide baseline information on long–term trends for several important coastal birds that can help inform research, monitoring and conservation efforts in the U.S. South Atlantic region.

Florida, Georgia, North Carolina, South Carolina↗

Bird communities, roads and development: Prospects and constraints of applying empirical models

Our objectives were to explain the prospects and constraints of applying empirical models that relate bird community metrics to broad-scale characteristics of roads and development. We explored the practical value of regression models that were derived for a large protected area in the Chihuahuan Desert. These models related bird species richness, relative abundance, or probability of occurrence to total length of roads within each of two spatial extents (1- and 2-km radii), distance to the nearest road, distance to the nearest development, or the two-way interactions of these variables. Empirical models can be used to inform conservation decisions, to parameterise simulation models for conservation planning, to identify threshold levels of road and development variables, and to determine the focus of management experiments for confirmatory hypothesis testing and improvement of model realism.

Biological Conservation↗

Marine birds and mammals of the Pacific Subarctic Gyres

The importance of the subarctic gyres of the North Pacific Ocean to marine birds and mammals is poorly known because of a paucity of data spanning appropriate scales of time and space. The little information that is available indicates the western subarctic gyre (WSAG) is more productive than the eastern subarctic gyre (ESAG). In summer the WSAG supports a greater density and higher biomass of seabirds than the ESAG, including at least two species that are more abundant at nesting colonies in the eastern subarctic. Perhaps most revealing of the seabird distributions in this regard is that of southern hemisphere shearwaters (Puffinus spp.) that overwinter in the North Pacific. Their biomass is an order of magnitude greater than that of any northern hemisphere species and is three-fold greater in the WSAG than in the ESAG. Several species of cetaceans also appear to be, or to have been prior to commercial depletions, more abundant in the WSA. Among the many prey species consumed by marine birds and mammals, squids and fishes in the family Myctophidae predominate overall. Other forage species, notably euphausiids, Pacific saury (Cololabis saira) and Atka mackerel (Pleurogrammus monopterygius) are important at times to certain species. The principal exceptions to this generalization are baleen whales and small seabirds that consume zooplankton. Interannual and decadal-scale variability in the physical environment and food web production affect seabirds and marine mammals at sea and at coastal breeding locations around the margins of the gyres.

Progress in Oceanography↗

Simulating cholinesterase inhibition in birds caused by dietary insecticide exposure

We describe a stochastic simulation model that simulates avian foraging in an agricultural landscape to evaluate factors affecting dietary insecticide exposure and to predict post-exposure cholinesterase (ChE) inhibition. To evaluate the model, we simulated published field studies and found that model predictions of insecticide decay and ChE inhibition reasonably approximated most observed results. Sensitivity analysis suggested that foraging location usually influenced ChE inhibition more than diet preferences or daily intake rate. Although organophosphorus insecticides usually caused greater inhibition than carbamate insecticides, insecticide toxicity appeared only moderately important. When we simulated impact of heavy insecticide applications during breeding seasons of 15 wild bird species, mean maximum ChE inhibition in most species exceeded 20% at some point. At this level of inhibition, birds may experience nausea and/or may exhibit minor behavioral changes. Simulated risk peaked in April–May and August–September and was lowest in July. ChE inhibition increased with proportion of vegetation in the diet. This model, and ones like it, may help predict insecticide exposure of and sublethal ChE inhibition in grassland animals, thereby reducing dependence of ecological risk assessments on field studies alone.

Ecological Modelling↗

Reproductive outcomes in colonial fish-eating birds: A biomarker for developmental toxicants in Great Lakes food chains: I. Historical and ecotoxicological perspectives

Colonial fish-eating birds have been used as convenient model populations in which to study the impact of chronic exposure to complex mixtures of persistent lipophilic environmental contaminants within the Great Lakes ecosystem. To date, published reports of contaminant-induced adverse reproductive outcomes exist for six species. We briefly review the studies of the herring gull ( Larus argentatu s), Forster's tern ( Sterna forsteri ), and the double-crested cormorant ( Phalacrocorax auritus ) to illustrate the use of reproductive outcomes in fish-eating birds as a biomarkerfor developmental toxicants in Great Lakes food chains. We discuss the management implications of using various species for such purposes. We recommend that cormorants be used more extensively in biomonitoring programs to measure exposure and effects of polyhalogenated aromatic hydrocarbons and other contaminants in aquatic food chains in the Great Lakes.

Great Lakes↗

Bird mercury concentrations change rapidly as chicks age: Toxicological risk is highest at hatching and fledging

Toxicological risk of methylmercury exposure to juvenile birds is complex due to the highly transient nature of mercury concentrations as chicks age. We examined total mercury and methylmercury concentrations in blood, liver, kidney, muscle, and feathers of 111 Forster's tern (Sterna forsteri), 69 black-necked stilt (Himantopus mexicanus), and 43 American avocet (Recurvirostra americana) chicks as they aged from hatching through postfledging at wetlands that had either low or high mercury contamination in San Francisco Bay, California. For each waterbird species, internal tissue, and wetland, total mercury and methylmercury concentrations changed rapidly as chicks aged and exhibited a quadratic, U-shaped pattern from hatching through postfledging. Mercury concentrations were highest immediately after hatching, due to maternally deposited mercury in eggs, then rapidly declined as chicks aged and diluted their mercury body burden through growth in size and mercury depuration into growing feathers. Mercury concentrations then increased during fledging when mass gain and feather growth slowed, while chicks continued to acquire dietary mercury. In contrast to mercury in internal tissues, mercury concentrations in chick feathers were highly variable and declined linearly with age. For 58 recaptured Forster's tern chicks, the proportional change in blood mercury concentration was negatively related to the proportional change in body mass, but not to the amount of feathers or wing length. Thus, mercury concentrations declined more in chicks that gained more mass between sampling events. The U-shaped pattern of mercury concentrations from hatching to fledging indicates that juvenile birds may be at highest risk to methylmercury toxicity shortly after hatching when maternally deposited mercury concentrations are still high and again after fledging when opportunities for mass dilution and mercury excretion into feathers are limited.

Environmental Science & Technology↗

Spider-mediated flux of PCBs from contaminated sediments to terrestrial ecosystems and potential risks to arachnivorous birds

We investigated aquatic insect utilization and PCB exposure in riparian spiders at the Lake Hartwell Superfund site (Clemson, SC). We sampled sediments, adult chironomids, terrestrial insects, riparian spiders (Tetragnathidae, Araneidae, and Mecynogea lemniscata), and upland spiders (Araneidae) along a sediment contamination gradient. Stable isotopes (? 13 C, ? 15 N) indicated that riparian spiders primarily consumed aquatic insects whereas upland spiders consumed terrestrial insects. PCBs in chironomids (mean 1240 ng/g among sites) were 2 orders of magnitude higher than terrestrial insects (15.2 ng/g), similar to differences between riparian (820?2012 ng/g) and upland spiders (30 ng/g). Riparian spider PCBs were positively correlated with sediment concentrations for all taxa (r 2 = 0.44?0.87). We calculated spider-based wildlife values (WVs, the minimum spider PCB concentrations causing physiologically significant doses in consumers) to assess exposure risks for arachnivorous birds. Spider concentrations exceeded WVs for most birds at heavily contaminated sites and were ?14-fold higher for the most sensitive species (chickadee nestlings, Poecile spp.). Spiders are abundant and ubiquitous in riparian habitats, where they depend on aquatic insect prey. These traits, along with the high degree of spatial correlation between spider and sediment concentrations we observed, suggest that they are model indicator species for monitoring contaminated sediment sites and assessing risks associated with contaminant flux into terrestrial ecosystems. ?? This article not subject to U.S. Copyright. Published 2009 by the American Chemical Society.

Environmental Science & Technology↗