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Metaproteomics and metagenomics reveal microbial pathways of organic matter degradation and methanogenesis in a marginally producing natural gas well

The expansion of natural gas production and utilization worldwide has led to the decline of many once-productive wells, eventually resulting in costly well-plugging and unused infrastructure. However, in areas like the Michigan basin, MI, where the majority of natural gas is biogenically produced, microbial communities could potentially be stimulated to generate additional methane, increasing gas supply and reducing the need to drill new wells. In this study, we performed metaproteomic, metagenomic, and geochemical analyses of Antrim Shale formation water from a marginally producing natural gas well to evaluate resident microbial community functions in the context of potential bioenergy production. Functional proteins involved in methanogenesis, degradation/catabolism (including organic matter degradation), biosynthesis, energy utilization, transmembrane transport, and stress response were among the most commonly identified groups. Three metagenome-assembled genomes (MAGs) were characterized, including Methanomicrobiaceae, Methanothrix , and Smithella . For each, the identified proteins involved in methanogenesis and the degradation of diverse organic compounds, strongly suggest their role in utilizing shale-derived organic matter. These findings provide an increased understanding of the microorganisms and their metabolisms generating natural gas in the Antrim Shale and establish a foundation for future stimulation efforts aimed at enhancing biogenic methane production in marginal gas wells.

Michigan

Prospectivity mapping for geologic hydrogen

Geologic, or naturally occurring, hydrogen has the potential to become a new, low-carbon, primary energy resource. Often referred to as “white” or “gold” hydrogen, this gas occurs naturally in the Earth’s subsurface, similar to petroleum resources. However, unlike petroleum, which releases carbon dioxide when burned, burning hydrogen only produces water as a byproduct. Exploration for geologic hydrogen remains in an early stage and discoveries of high concentrations of subsurface hydrogen are still relatively rare. To facilitate research and exploration for this potential resource, this report presents the first publicly available prospectivity map of geologic hydrogen accumulations in the conterminous United States. Prospective regions are those regions in which all major components necessary for a hydrogen accumulation likely are present—a source of sufficient hydrogen generation, porous reservoirs for storage, and seals to prevent leakage. The midcontinent region of the United States and the central California coast are revealed as having high prospectivity. This analysis also identifies previously unrecognized prospective regions that may be favorable due to long distance lateral migration of subsurface hydrogen, such as the offshore eastern seaboard of the United States, and can provide a linkage between surface observations of hydrogen degassing and far-field source regions. The methodology developed to create this map is expandable and flexible and may be adapted to incorporate new concepts in the hydrogen system and for application to other regions of the world.

conterminous United States

Morphodynamics of snow barchans at Concordia Station, Antarctica

Barchans are crescent-shaped dunes that form and migrate under unimodal wind regimes in areas of low sediment availability. While sand barchan morphodynamics has been extensively studied, snow barchans remain poorly documented. Here, using hourly time-series images taken near Concordia Station, Antarctica, we measure the sizes (lengths 0.3 m to 13 m, widths 0.4 m to 7.5 m) and migration rates (0.13 m h −1 to 3.5 m h −1 ) of 44 populations of snow barchans during 2017–2022. We compare this dataset with established height–velocity and length-width relationships for sand barchans in both air and water. Our results show that snow barchans follow the same scaling as sand barchans, allowing us to estimate a characteristic sintering (bonding of snow particles) time of about one day. This sintering process limits the size of snow barchans when active, reduces their aspect ratios, and, once wind falls below the transport threshold, explains their preservation over a few years. During wind events, migrating barchans are too small to maintain their shape and orientation, making them highly responsive to fluctuations in wind direction. Thus, studying snow barchans improves understanding of an elementary bedform encountered in multiple environments and also of the surface properties of snow on different timescales, offering insights into snow accumulation and wind-blown snow in ice cores.

Geomorphica

Grand Canyon landslide-dam and paleolake triggered by the Meteor Crater impact at 56 ka

This paper hypothesizes that the Meteor Crater impact in Arizona, USA, 56,000 years ago triggered landslides in Grand Canyon that dammed the Colorado River and formed Nankoweap paleolake. This is compatible with shock and earthquake physics for the impact that infer a M5.4 seismic event, attenuated to an effective magnitude of M3.5 at Grand Canyon. Results that support the hypothesis include radiocarbon dating of driftwood and luminescence dating of associated slack-water lake sediments that are preserved in caves up to 60 m above the modern Colorado River. Radiocarbon ages from two locations, including Stanton’s Cave, date the driftwood as 55.25 ± 2.44 ka (n = 4). Sediments associated with the driftwood gave a luminescence age of 56.00 ± 6.39 ka (n = 2). These six Grand Canyon dates, and three published ages for the Meteor Crater impact, show statistically indistinguishable results that support the hypothesis for a geologically instantaneous series of events with a mean age of 55.60 ± 1.30 ka. This work highlights the value of radiocarbon dating near the limits of the technique, integration of multiple dating methods, and seismic and landslide hazards associated with meteorite impacts in regions of extreme topography like Grand Canyon.

Arizona

New Hampshire and Landsat

At its widest point, a mere 80 miles separate the eastern and western borders of New Hampshire. Its northern and southern borders are just 175 miles apart. Even so, few States can boast as much rugged natural beauty per mile as the Nation’s fifth smallest. Nestled within New Hampshire are 93 State parks teeming with moose, Ursus americanus (Pallas, 1780; black bears), coyotes, beavers, river otters, and foxes. The largest section of White Mountain National Forest cuts across north-central New Hampshire, drawing visitors to its lakes, streams, mountain peaks, and hardwood forests. New Hampshire also is home to Lake Winnipesaukee, the State’s largest lake, notable for its floating post offices, the annual “ice-out” contest that sees residents vying to guess the date its surface ice dissipates, and its supporting role in films such as “On Golden Pond” and “What About Bob?” However, the scenic forests of New Hampshire face challenges in the form of invasive species such as Lymantria dispar (Linnaeus, 1758; spongy moth), Adelges piceae (balsam woolly adelgid), and Agrilus planipennis (emerald ash borer). In recent years, New Hampshire’s lakes and streams have seen more cyanobacterial blooms as well. The U.S. Geological Survey Landsat Program offers a consistent, reliable, and historically unmatched source of Earth observations that can aid in the mapping, monitoring, and management of New Hampshire’s land and water resources. Here are a few ways Landsat data have been used in the Granite State.

New Hampshire

From model to action: Identifying the gaps in coastal marsh models for decision making

Coastal salt marsh modeling projects are designed to answer questions about where salt marshes may migrate, how they can migrate, and how they will be impacted by changing water levels. While this information is vital for climate-resilient marsh conservation, translating these findings into actionable results remains a challenge. The authors examined the actionability of marsh modeling efforts in the United States by analyzing data collected from semi-structured interviews of marsh model users ( n = 24) across two ongoing projects along the U.S. East Coast and the Gulf of America (Gulf of Mexico). By qualitatively analyzing the interview data, the authors found that the tasks of practitioners who use coastal marsh model outputs fall into three major themes: (1) marsh restoration, (2) planning with uncertainty, and (3) conserving habitat for marsh-reliant species. For each of these themes, the authors identify unmet needs, including high spatial resolution information for local planning, accessible descriptions of uncertainty to increase user confidence, and the incorporation of human dimensions data (e.g., human alterations to the landscape such as impoundments and culverts) for a comprehensive understanding of the coastal salt marsh. Marsh modeling projects should strategize how to fulfil these unmet user needs so that marsh modeling outputs can better support decisions related to marsh conservation and restoration.

Gulf of America, United States East Coast

Tracing metal sources and groundwater flow paths in the Upper Animas River watershed using rare earth elements and stable isotopes

Groundwater flow paths and processes that govern metal mobility and transport are difficult to characterize in mountainous bedrock watersheds. Despite the difficulty in holistic characterization, conceptual understanding of subsurface hydrologic and geochemical processes is key to developing remediation plans for locations affected by acid mine drainage, such as the Upper Animas River watershed in southwestern Colorado, USA. Stable isotopes of water and rare earth elements were utilized to evaluate groundwater flow and metal sources within this complex catchment. Stable isotope samples collected from draining mine adits and springs display systematic spatial variation wherein sample sites at higher elevations have greater seasonal variability than sites at lower elevations. The Upper Cement Creek watershed, where multiple draining mines are present, displays the lowest seasonal variation in stable isotopic signatures, potentially indicating the presence of a large, well-mixed volume of groundwater storage or interbasin groundwater flow. Rare earth elements display statistically significant variation between different alteration styles in the catchment. Overprinting of regional propylitic alteration is evident based on enrichment of middle rare earth elements in acidic springs and mines that are not spatially associated with surficial exposures of acid generating alteration styles. Europium anomaly and middle rare earth enrichment signatures from two flooded mine tunnels on opposite sides of a watershed divide indicate connections to the same subsurface flooded mine workings.

Colorado

Estimated ultimate recovery (EUR) Prediction for Eagle Ford Shale using integrated datasets and artificial neural networks

The estimated ultimate recovery (EUR) is an important parameter for forecasting oil and gas production and informing decisions regarding field development strategies. In this study, we combined site-specific geologic, completion, and operational parameters with the predictive capabilities of machine learning (ML) models to predict EURs of the wells for the Eagle Ford Marl Continuous Oil Assessment Unit. We developed an extensive dataset of wells that have produced from the lower and upper Eagle Ford Shale intervals and reduced the model complexity using principal component analysis. We tested the ML models and estimated the sensitivities of ML-predicted EURs to changes in the values of different input variables. The results of applying the optimized ML model to the Eagle Ford suggest that the approach developed in this study could be promising. The ML estimates of the EURs fit the DCA-based values with an R 2 ~ 0.9 and a mean absolute error of ~36 × 10 3 bbl. In the lower Eagle Ford Shale, the EUR estimates were found to be most sensitive to changes in porosity, net thickness of the interval, clay volume, and the API gravity of the oil; and that in the upper Eagle Ford Shale they were most sensitive to changes in the total organic carbon and water saturation, which suggests that it could be important to consider these parameters in assessing these intervals or close analogs.

Louisiana, Mississippi, Texas

Wetter winters, drier summers: Quantifying the change in hydrological response around the Puget Sound area using the wflow_sbm hydrological model and CMIP6 projections

Climate change is expected to impact hydrological regimes worldwide, including the Pacific Northwest of the United States. This study investigates how climate change will affect river discharge in the Puget Sound region of the State of Washington, with a focus on King and Pierce Counties. We simulated river discharge under historical and future conditions using the physically based, spatially distributed wflow_sbm hydrological model, which was calibrated and validated against U.S. Geological Survey discharge records. Future forcing was based on an ensemble of six high-resolution CMIP6 climate models, which were bias corrected using empirical quantile mapping. The results indicate a decrease in summer discharges (5–10%) and an increase in winter discharges (5–10%) across the study region. The high discharges (90th percentile) are projected to increase in winter, and the low discharges are projected to decrease in summer, due to shifts in precipitation regimes, snowpack hydrology, and evapotranspiration. However, variability between individual CMIP6 models often exceeds the magnitude of ensemble mean changes, underscoring substantial uncertainty in climate projections and the importance of including multiple climate models in climate change analysis. Furthermore, model consensus increased with elevation, which could be the result of the higher elevation areas being driven by less diverse hydrological processes. These findings highlight potential challenges for regional water management, ecosystem health, and flood risk mitigation in the Puget Sound region under future climate conditions.

EarthArXiv

Characteristics of the fault damage zone From high-resolution seismic imaging along the Palos Verdes Fault, California

The distribution and intensity of fault damage zones provides insight into fault activity and its relationship to fluid flow in the crust. Presently, measures of the in-situ distribution of fault damage remain limited and along-strike studies are rare. This study focuses on an offshore section Palos Verdes Fault damage zone that spans 28 km, near Los Angeles, California. To investigate the previously unresolved shallow (∼400 m below the seafloor) fault damage zone we use densely spaced (∼500 m line separation) newly collected sparker multichannel seismic lines and sub-bottom profiles. The combination of high-resolution acquisition methods and specialized seismic processing workflows provide improved imaging of shallow faulting. We apply a multi-trace similarity technique to identify discontinuities in the seismic data that may be attributed to faults and fractures. This fault detection approach reveals diverse fault damage patterns on adjacent seismic profiles. However, a discernible damage zone pattern emerges by stacking multiple damage detection profiles along strike. We find that peak damage identified in this way corresponds to the active main fault strand, confirmed in this study, and thus the technique may be useful for identifying active fault strands elsewhere. Additionally, we observe that the variable width of the damage zone along strike is controlled by fault obliquity. Furthermore, our observations reveal a correlation between fault damage and seafloor fluid seeps visible in the water column, suggesting that damage plays a role in controlling fluid flow around the fault.

California

Three-dimensional geologic framework model of the Rio San Jose groundwater basin and adjacent areas, New Mexico

As part of a U.S. Geological Survey study in cooperation with the Bureau of Reclamation and the Pueblo of Acoma, New Mexico, and the Pueblo of Laguna, New Mexico, a digital three-dimensional geologic framework model was constructed for the Rio San Jose and its surface-water drainage basin in west-central New Mexico. This three-dimensional model defines the altitude, thickness, and extent of 18 geologic units for use in a regional numerical hydrologic model. The model included an undifferentiated Proterozoic basement layer, 13 consolidated Paleozoic and Mesozoic rock units, and 4 Cenozoic units. Model input data were compiled from published cross sections, well data, structure contour maps, selected geophysical data, and data derived from geologic maps and structural features in the study area. These data were used to construct faulted surfaces that represent the upper and lower subsurface geologic unit boundaries. The digital three-dimensional geologic framework model combines faults, the altitude of the tops of each geologic unit, and boundary lines depicting the subsurface extent of each geologic unit. The digital three-dimensional geologic model described in this report and the corresponding data release represents the generalized geometry of the subsurface geologic units; it reproduces with reasonable accuracy the input geologic data and is consistent with previously published subsurface conceptualizations of the region. The geologic framework model is at a scale and resolution appropriate for use as the foundation for a numerical hydrologic model of the study area.

New Mexico

Widespread anhydrite saturation in Laramide-age arc magmas of southwestern USA

Anhydrite is considered a rare mineral phase in magmas, with only ∼33 documented occurrences worldwide. However, anhydrite readily decomposes in the near-surface environment, making it difficult to recognize its former presence in rocks collected at or near Earth’s surface. In such samples, only small anhydrite inclusions fully shielded within other minerals can have survived. During a recent field trip to the southwestern USA, we sampled 17 Laramide-age (ca. 40−80 Ma) magma systems, most of which are associated with porphyry copper deposits. A systematic search for anhydrite inclusions preserved within apatite, amphibole, plagioclase, and quartz phenocrysts in ∼100 rock samples by optical microscopy and Raman spectroscopy revealed that each of these 17 magma systems was at least temporarily anhydrite-saturated. Also, most previously identified magmatic anhydrite-bearing intrusions are associated with porphyry copper deposits, and both intrusive and volcanic rocks containing magmatic anhydrite show high Sr/Y ratios. These observations suggest that anhydrite saturation and porphyry copper formation are linked via magma fractionation at high pressure. Compared to average arc magmas, anhydrite-bearing magmas are unusually oxidized and sulfur-rich and seem to also be unusually water-rich. Hence, our preferred interpretation is that magma generation and/or fractionation at high pressure promotes the formation of superhydrous and oxidized magmas, which in turn promotes high sulfur contents and ultimately the precipitation of anhydrite. The high mineralization potential of these magmas does not need to result from their high sulfur content but could be caused by other properties of high-pressure magmas.

Arizona, New Mexico

Reconstructing the Quaternary depositional history using geologic mapping and three-dimensional modeling of the subsurface near Fort Morgan, northeastern Colorado

Centered on Fort Morgan, Colorado, this study is intended to build from previous work by adding a three-dimensional (3D) view of the subsurface to better understand the depositional history of Quaternary deposits. A 1:100,000 scale geologic map was made by combining previous geologic maps, regional soil maps, and recent field investigations. In addition to the geologic mapping, drill hole lithologic data from water wells and oil and gas exploration were compiled and lithologic units simplified to best represent the stratigraphy of the Quaternary deposits. From these subsurface data, a 3D subsurface model was constructed, trimmed at the surface by a digital elevation model, and a bedrock surface foundation gridded from drill hole data was added. The surface of the 3D model was then compared visually to the surficial geologic map. Cross sections were constructed from the 3D model and compared to site-specific drilling that was done as part of this project. Finally, the model was examined in detail to reconstruct the depositional history of the subsurface alluvial and eolian units. Alluvial and fluvial drainage basins exposed in the subsurface have a greater areal extent than the present-day narrow drainages. Older eolian sand in the subsurface tends to be interbedded with loess indicating coeval deposition. Holocene sand, both eroded from bedrock exposed at the surface north of the study area and reworked from the South Platte River, buries most of the interbedded older sand and loess.

Colorado

Uncertainty reduction for subaerial landslide-tsunami hazards

Subaerial rock slopes may generate a tsunami by rapidly moving into the water. Large uncertainty in landslide characteristics propagates into large uncertainty in tsunami hazard, making hazard assessment more difficult for land and emergency managers. Once a potentially tsunamigenic landslide is identified, it may not be clear which landslide characteristics contribute most significantly to uncertainty in the tsunami hazard. Our aim is to document the relative worth of different landslide characteristics (e.g., size, material properties) for reducing uncertainty in landslide-tsunami hazard assessments. Isolating the relative importance of specific landslide characteristics may inform prioritization of data collection and improve efficiency in understanding hazard. To accomplish this, we generated a set of 288 landslide-tsunami simulations in which we systematically varied the size and material properties of possible failure extents at the Barry Arm landslide complex in northwestern Prince William Sound, Alaska, USA. We find that for landslides smaller than the receiving waterbody, the landslide volume has the strongest effect on resulting wave characteristics and thus the highest leverage on reducing uncertainty in tsunami hazard. In contrast, for landslides substantially larger than the waterbody, the duration of rapid movement of the landslide has the highest leverage. Based on our results, we propose a classification scheme for subaerial landslides based on the relative size of the landslide and waterbody. Additionally, our results support the generation of a tsunami height transfer function between existing tide gages and a nearby coastal city. These results have direct implications for the practice of operational early warning.

Alaska

Beyond the mangroves: A global synthesis of tidal forested wetland types, drivers and future information opportunities

There is increasing awareness of the global diversity of tidal forested wetlands (TFWs) and their significance in the provision of ecosystem services. These ecosystems, including mangrove forests, tidal freshwater forested wetlands, supratidal forests and transitional forests together span multiple climatic zones, geomorphic settings, and inundation and salinity regimes. We utilise case studies across five continents to demonstrate the state of knowledge among TFWs. Intertidal mangroves are the best-defined of the TFWs thanks to decades of research on their geomorphology, hydrology and ecology across their broad distribution. Non-mangrove forest settings, however, demonstrate more diverse hydrological, biochemical and vegetation conditions. In many cases, non-mangrove forests are situated at upper intertidal or supratidal elevations, where surface waters and groundwater are subject to interactions between tides freshwater inputs. Salinity datasets show variations ranging from tidal freshwater forested wetlands and ‘low-salinity mangroves’ to mesohaline or marine salinities, often with high temporal variability. While the floristic composition of non-mangrove forests vary among biogeographic regions, locally dominant TFW species are commonly distributed beyond the tidal niche into non-tidal wetland and upland forests. This presents challenges for traditional remote sensing approaches to ecosystem mapping, which are mostly lacking for non-mangrove forests. Geomorphic approaches and developments in machine learning offer opportunities to address this.

Preprint

Software to support remote sensing of river discharge based on critical flow theory

Water resource management requires accurate observations of streamflow but standard field methods for measuring river discharge ( Q ) are costly and can be hazardous for equipment and personnel. Remote sensing has become a viable alternative, but many image-based techniques require field data for calibration and depth and velocity can seldom be mapped with a single sensor. A new approach based on critical flow theory, in contrast, allows both of these attributes to be inferred from readily available image data. This technique only pertains to sites with standing waves, called undular hydraulic jumps (UHJs), but a recent investigation demonstrated its potential to provide accurate discharge estimates. This paper introduces software designed to facilitate Inferring Q from UHJs Identified in River Images (InQUIRI). The package includes modules for retrieving data from image servers, making the measurements of wavelength and width required to calculate discharge, inferring a representative wavelength from a profile digitized along a wave train, combining multiple estimates to obtain an ensemble median discharge, and assessing accuracy via comparison to gage records from the U.S. Geological Survey. By making these steps easier to implement, InQUIRI enables users to apply the workflow to a variety of UHJ-containing images. Accumulating more case studies, some successful and others less so, would help constrain the range of applicability of the critical flow approach and foster development of refined guidelines for selecting and measuring waves. The software described herein could play an important role in promoting informed use of this new technique for non-contact streamflow measurement.

Arizona, Colorado, New Mexico, Utah

Using surficial geologic maps, vegetation, and monitoring to address erosion impacts from grazing in Channel Islands National Park, California

Employing a map-unit classification scheme based on geomorphic process and age, the U.S. Geological Survey (USGS) mapped Quaternary surficial deposits of the five islands comprising Channel Islands National Park (CHIS), California, as no such maps previously existed. Mapping was motivated through an agreement with the National Park Service (NPS) to aid natural resource assessments, including post-grazing disturbance recovery and identification of mass wasting and tectonic hazards. The resulting detailed (1:12,000 scale) maps portray areas of upland erosional transport processes and alluvial, fluvial, eolian, beach, marine terrace, mass wasting, and mixed depositional processes at a scale commensurate with the process signal on the landscape. Detailed, GPS-located observations of sedimentology, pedogenic development, landscape position, and geomorphology constrain map unit identification. In addition, map-unit boundary delineation was determined in a GIS using a variety of high-resolution (sub-meter) aerial imagery and lidar-based DEMs complemented by derivative raster products. The GIS geodatabase schema used is GeMS compliant. Resolvable map-unit widths are as small as 10-15 meter. Locational accuracy of unit boundaries is estimated to be as low as 10 m or better. Detailed mapping is at a scale allowing determination of geomorphic transport processes operating on the landscape and conveys geologic information to land managers at a resolution commensurate with park resources. Map unit ages are constrained by relative soil chronostratigraphy, vertebrate and invertebrate fossils, and materials collected for dating control using radiogenic, luminescence, and cosmogenic radionuclide techniques. Associated topical studies examined connections between geology, surface water, and vegetation distribution and restoration.

California

Extremophile hotspots linked to containerized industrial waste dumping in a deep-sea basin

Decaying barrels on the seafloor linked to DDT contamination have raised concerns about the public health implications of decades old industrial waste dumped off the coast of Los Angeles. To explore their contents, we collected sediment cores perpendicular to five deep-sea barrels. The concentration of DDT and its breakdown products were highly elevated relative to control sites yet did not vary with distance from the barrels, suggesting that they were not associated with the contamination. Sediment cores collected through white halos surrounding three barrels were enriched in calcite and had elevated pH. The associated microbial communities were low diversity and dominated by alkalophilic bacteria with metagenome-assembled genomes adapted to high pH. A solid concretion sampled between a white halo and barrel was composed of brucite, a magnesium hydroxide mineral that forms at high pH. Based on these findings, we postulate that leakage of containerized alkaline waste triggered the formation of mineral concretions that are slowly dissolving and raising the pH of the surrounding sediment pore water. This selects for taxa adapted to extreme alkalinity and drives the precipitation of “anthropogenic” carbonates forming white halos, which serve as a visual identifier of barrels that contained alkaline waste. Remarkably, containerized alkaline waste discarded >50 years ago represents a persistent pollutant creating localized mineral formations and microbial communities that resemble those observed at some hydrothermal systems. These formations were observed at one-third of the visually identified barrels in the San Pedro Basin and have unforeseen, long-term consequences for benthic communities in the region.

California