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At least 847 records · Page 47Linked to original sources
USGS2015

Dynamics of an open basaltic magma system: The 2008 activity of the Halema‘uma‘u Overlook vent, Kīlauea Caldera

On March 19, 2008 a small explosive event accompanied the opening of a 35-m-wide vent (Overlook vent) on the southeast wall of Halema‘uma‘u Crater in Kīlauea Caldera, initiating an eruptive period that extends to the time of writing. The peak of activity, in 2008, consisted of alternating background open-system outgassing and spattering punctuated by sudden, short-lived weak explosions, triggered by collapses of the walls of the vent and conduit. Near-daily sampling of the tephra from this open system, along with exceptionally detailed observations, allow us to study the dynamics of the activity during two eruptive sequences in late 2008. Each sequence includes background activity preceding and following one or more explosions in September and October 2008 respectively. Componentry analyses were performed for daily samples to characterise the diversity of the ejecta. Nine categories of pyroclasts were identified in all the samples, including wall-rock fragments. The six categories of juvenile clasts can be grouped in three classes based on vesicularity: (1) poorly, (2) uniformly highly to extremely, and (3) heterogeneously highly vesicular. The wall-rock and juvenile clasts show dissimilar grainsize distributions, reflecting different fragmentation mechanisms. The wall-rock particles formed by failure of the vent and conduit walls above the magma free surface and were then passively entrained in the eruptive plume. The juvenile componentry reveals consistent contrasts in degassing and fragmentation processes before, during and after the explosive events. We infer a crude ‘layering’ developed in the shallow melt, in terms of both rheology and bubble and volatile contents, beneath a convecting free surface during background activity. A tens-of-centimetres thick viscoelastic surface layer was effectively outgassed and relatively cool, while at depths of less than 100 m, the melt remained slightly supersaturated in volatiles and actively vesiculating. Decoupled metre-sized bubbles rising through the column burst through the free surface frequently, ejecting fragments of the outgassed upper layer. When the surface was abruptly perturbed by the rock-falls, existing mm-sized bubbles expanded, leading to the acceleration of adjacent melt upward and consecutive explosions, while renewed nucleation created a minor population of 10-micron-sized bubbles. After each explosive event in September–October 2008, this layering was re-established but with decreasing vigour, suggesting that the magma batch as a whole was becoming progressively depleted in dissolved volatiles.

Hawai'i↗
USGS2008

Long-term survival despite low genetic diversity in the critically endangered Madagascar fish-eagle

The critically endangered Madagascar fish-eagle (Haliaeetus vociferoides) is considered to be one of the rarest birds of prey globally and at significant risk of extinction. In the most recent census, only 222 adult individuals were recorded with an estimated total breeding population of no more than 100-120 pairs. Here, levels of Madagascar fish-eagle population genetic diversity based on 47 microsatellite loci were compared with its sister species, the African fish-eagle (Haliaeetus vocifer), and 16 of these loci were also characterized in the white-tailed eagle (Haliaeetus albicilla) and the bald eagle (Haliaeetus leucocephalus). Overall, extremely low genetic diversity was observed in the Madagascar fish-eagle compared to other surveyed Haliaeetus species. Determining whether this low diversity is the result of a recent bottleneck or a more historic event has important implications for their conservation. Using a Bayesian coalescent-based method, we show that Madagascar fish-eagles have maintained a small effective population size for hundreds to thousands of years and that its low level of neutral genetic diversity is not the result of a recent bottleneck. Therefore, efforts made to prevent Madagascar fish-eagle extinction should place high priority on maintenance of habitat requirements and reducing direct and indirect human persecution. Given the current rate of deforestation in Madagascar, we further recommend that the population be expanded to occupy a larger geographical distribution. This will help the population persist when exposed to stochastic factors (e.g. climate and disease) that may threaten a species consisting of only 200 adult individuals while inhabiting a rapidly changing landscape. ?? 2008 The Authors.

Molecular Ecology↗
USGS2025

Urbanization and host relatedness shape virome composition in a widespread, generalist carnivore

Urban wildlife species have the potential to serve as links in disease transmission between wildlife, humans and domestic animals at the wildland–urban interface (WUI), contributing to both sustained cross-species transmission of pathogens and the emergence of diseases in susceptible populations. However, the relative roles of host and environmental factors in shaping the composition of pathogen communities in urban wildlife is understudied. In this study, we integrated DNA and RNA virome data with host genomic and GPS datasets to investigate factors shaping virome composition in bobcats ( Lynx rufus ) at the WUI in the Tucson Mountains, Arizona, USA. Using a hybrid-capture approach for 31 scats and 17 buccal swabs, we identified multiple viruses that could affect carnivore health at the WUI, including canine parvovirus, feline astrovirus, Felis catus papillomaviruses 2 and 3 and Lyon-IARC polyomavirus. Models of virome composition and distribution of viral taxa indicated contributions of host genetic relatedness and factors relating to urbanisation (such as percentages of urban land cover, road and building densities and distances to roads). Genetic associations with virome compositions were particularly influenced by females. While females exhibit significant isolation by distance, partial Mantel tests revealed a significant correlation between beta diversity and host genetic distance in females only. To our knowledge, this study represents the first assessment of factors shaping virome composition in a wild felid. Our finding of known feline and canine pathogens in bobcats underscores the potential of the WUI to facilitate cross-species transmission between wild and domestic animals.

Arizona↗
USGS2008

Do non-native plant species affect the shape of productivity-diversity relationships?

The relationship between ecosystem processes and species richness is an active area of research and speculation. Both theoretical and experimental studies have been conducted in numerous ecosystems. One finding of these studies is that the shape of the relationship between productivity and species richness varies considerably among ecosystems and at different spatial scales, though little is known about the relative importance of physical and biological mechanisms causing this variation. Moreover, despite widespread concern about changes in species' global distributions, it remains unclear if and how such large-scale changes may affect this relationship. We present a new conceptual model of how invasive species might modulate relationships between primary production and species richness. We tested this model using long-term data on relationships between aboveground net primary production and species richness in six North American terrestrial ecosystems. We show that primary production and abundance of non-native species are both significant predictors of species richness, though we fail to detect effects of invasion extent on the shapes of the relationship between species richness and primary production.

American Midland Naturalist↗
USGS2012

Development of regional skews for selected flood durations for the Central Valley Region, California, based on data through water year 2008

Flood-frequency information is important in the Central Valley region of California because of the high risk of catastrophic flooding. Most traditional flood-frequency studies focus on peak flows, but for the assessment of the adequacy of reservoirs, levees, other flood control structures, sustained flood flow (flood duration) frequency data are needed. This study focuses on rainfall or rain-on-snow floods, rather than the annual maximum, because rain events produce the largest floods in the region. A key to estimating flood-duration frequency is determining the regional skew for such data. Of the 50 sites used in this study to determine regional skew, 28 sites were considered to have little to no significant regulated flows, and for the 22 sites considered significantly regulated, unregulated daily flow data were synthesized by using reservoir storage changes and diversion records. The unregulated, annual maximum rainfall flood flows for selected durations (1-day, 3-day, 7-day, 15-day, and 30-day) for all 50 sites were furnished by the U.S. Army Corps of Engineers. Station skew was determined by using the expected moments algorithm program for fitting the Pearson Type 3 flood-frequency distribution to the logarithms of annual flood-duration data. Bayesian generalized least squares regression procedures used in earlier studies were modified to address problems caused by large cross correlations among concurrent rainfall floods in California and to address the extensive censoring of low outliers at some sites, by using the new expected moments algorithm for fitting the LP3 distribution to rainfall flood-duration data. To properly account for these problems and to develop suitable regional-skew regression models and regression diagnostics, a combination of ordinary least squares, weighted least squares, and Bayesian generalized least squares regressions were adopted. This new methodology determined that a nonlinear model relating regional skew to mean basin elevation was the best model for each flood duration. The regional-skew values ranged from -0.74 for a flood duration of 1-day and a mean basin elevation less than 2,500 feet to values near 0 for a flood duration of 7-days and a mean basin elevation greater than 4,500 feet. This relation between skew and elevation reflects the interaction of snow and rain, which increases with increased elevation. The regional skews are more accurate, and the mean squared errors are less than in the Interagency Advisory Committee on Water Data's National skew map of Bulletin 17B.

California↗
USGS2011

Chapter 11: Management considerations

We conducted an ecoregional assessment of sagebrush ( Artemisia spp. ) ecosystems in the Wyoming Basins and surrounding regions (WBEA) to determine broad-scale species-environmental relationships. Our goal was to assess the potential influence from threats to the sagebrush ecosystem on associated wildlife through the use of spatially explicit occurrence and abundance models. These models were developed using information from field surveys conducted along gradients of vegetation productivity and human disturbance integrated with spatial datasets delineating land cover, topography, and human land use in the WBEA area. Our evaluation included all sagebrush-associated wildlife species across multiple taxa whose habitat requirements and distributions were appropriate for modeling and interpretation at the broad scales of this assessment. Dominant land uses were included in delineating the human footprint. Although overall levels of the cumulative human footprint were generally low across the WBEA area, oil and gas activities have decreased the amount of shrubland habitats and increased fragmentation within development regions over the last century. At the scale of this assessment, the influence of humans was primarily expressed as an indirect function through actions that altered or reduced available habitat. We identified 65 plant species of conservation concern; 28 of 40 vertebrate species associated with sagebrush were species of concern in at least one state. We modeled environmental relationships for 15 wildlife species from data collected from surveys conducted in 2005 and 2006 designed to sample multiple species and taxa along land cover and land use gradients across the WBEA area. Occurrence of 3 species was negatively influenced by human features; anthropogenic features were a positive influence for 3 species, 8 had a mixed response, and 1 had no measurable relationship. Sagebrush land cover, considered in all wildlife models, was important to most species but differed among species in the proportion of sagebrush required and at what spatial extent. For most species examined, the spatial extent at which sagebrush cover influenced the probability of occupancy was much larger than an individual’s home range size. Exotic plants were strongly associated with human features, particularly roads, which may function as linear vectors to facilitate spread of exotic plants across the WBEA area. We used coarse-grained spatial and thematic data because of the large spatial extent (350,000 km 2 ) of the WBEA area and the need for a consistent land cover map for the region. Distributions of species occurrence or abundance mapped in this assessment need to be corroborated with information on population demographics. In addition, our results should be interpreted relative to assumptions inherent in broad-scale ecoregional assessments. Our assessment provides managers with extensive and detailed maps of occurrence and abundance, allowing for status assessments of native species, diversity and richness, natural communities, and ecological systems present within the Wyoming Basins.

Wyoming↗
USGS2013

Climate-associated population declines reverse recovery and threaten future of an iconic high-elevation plant

Although climate change is predicted to place mountain-top and other narrowly endemic species at severe risk of extinction, the ecological processes involved in such extinctions are still poorly resolved. In addition, much of this biodiversity loss will likely go unobserved, and therefore largely unappreciated. The Haleakalā silversword is restricted to a single volcano summit in Hawai‘i, but is a highly charismatic giant rosette plant that is viewed by 1–2 million visitors annually. We link detailed local climate data to a lengthy demographic record, and combine both with a population-wide assessment of recent plant mortality and recruitment, to show that after decades of strong recovery following successful management, this iconic species has entered a period of substantial climate-associated decline. Mortality has been highest at the lower end of the distributional range, where most silverswords occur, and the strong association of annual population growth rates with patterns of precipitation suggests an increasing frequency of lethal water stress. Local climate data confirm trends toward warmer and drier conditions on the mountain, and signify a bleak outlook for silverswords if these trends continue. The silversword example foreshadows trouble for diversity in other biological hotspots, and illustrates how even well-protected and relatively abundant species may succumb to climate-induced stresses.

Hawai'i↗
USGS2006

Distribution and ecology of Dreissena polymorpha (pallas) and Dreissena bugensis (andrusov) in the upper Volga basin

This paper presents data on contemporary distribution patterns of two species of Dreissenidae, the zebra mussel (Dreissena polymorpha) and the Quagga mussel (Dreissena bugensis), and their role in ecosystem processes in the Ivan'kovo, Uglich, Rybinsk, and Gorky Reservoirs of the Upper Volga River basin. The role of zebra mussel was also studied in experimental mesocosms of 15 m3. Maximum abundance and species diversity of macroinvertebrates, especially of leeches, polychaetes, crustaceans, and heterotopic insects, were attained in the portions of reservoirs where Dreissenidae were present and in experimental mesocosms where zebra mussel biomass was the highest. In the mesocosm studies, the presence of zebra mussel druses (colonies) provided shelter for macroinvertebrates, reducing their vulnerability to predation by perch (Perca fluviatills) larvae and yearlings, thereby increasing macroinvertebrate species diversity. It was shown that in addition to its role in aquatic biocenosis (ecological community) formation and water purification, Dreissenidae are important food objects for benthophagous fishes, especially roach (Rutilus rutilus). Examination of intestines of benthophagous fishes showed that the length of Dreissenidae ranged from 5 to 20 mm in roach; from 4 to 14 mm in silver bream (Blicca bjoerkna), and from 2 to 10 mm in bream (Abramis brama). The largest mussels consumed were Quagga mussels up to 30 mm, noted in the predatory cyprinid, ide (Leuciscus idus). Copyright ?? 2006 by ASTM International.

Journal of ASTM International↗
USGS2020

Global status of trout and char: Conservation challenges in the twenty-first century

Freshwater ecosystems are among the most threatened ecosystems in the world (Richter et al. 1997; Strayer and Dudgeon 2010), and freshwater fishes may now be the most threatened group of vertebrates (Ricciardi and Rasmussen 1999; Vorosmarty et al. 2010; Darwall and Freyhof 2016). Of the 7,300 freshwater fish species globally assessed by the International Union for Conservation of Nature (IUCN, www.iucnredlist.org) in 2013, nearly one of every three species was threatened with extinction (Darwall and Freyhof 2016). Growing pressures from a multitude of direct and indirect human stressors (e.g., habitat loss and degradation, pollution, invasive species, overexploitation, diversion or alteration of biological flows, climate change, and others) threaten the persistence of many freshwater fish species and entire aquatic communities around the globe (Limburg et al. 2011). This pattern is particularly true for salmonid fishes (family Salmonidae, subfamily Salmoninae, belonging to the genera Oncorhynchus, Salvelinus, Salmo, Hucho, Parahucho, Brachymystax, and Salvethymus). Salmonids are globally-distributed, coldwater taxa with life-cycles restricted entirely to freshwater ecosystems (typically referred to as trout and char), but also Atlantic and Pacific salmon with more complex anadromous life-histories.

Book chapter↗
USGS2022

Modeling protected species distributions and habitats to inform siting and management of pioneering ocean industries: A case study for Gulf of Mexico aquaculture

Marine Spatial Planning (MSP) provides a process that uses spatial data and models to evaluate environmental, social, economic, cultural, and management trade-offs when siting (i.e., strategically locating) ocean industries. Aquaculture is the fastest-growing food sector in the world. The United States (U.S.) has substantial opportunity for offshore aquaculture development given the size of its exclusive economic zone, habitat diversity, and variety of candidate species for cultivation. However, promising aquaculture areas overlap many protected species habitats. Aquaculture siting surveys, construction, operations, and decommissioning can alter protected species habitat and behavior. Additionally, aquaculture-associated vessel activity, underwater noise, and physical interactions between protected species and farms can increase the risk of injury and mortality. In 2020, the U.S. Gulf of Mexico was identified as one of the first regions to be evaluated for offshore aquaculture opportunities as directed by a Presidential Executive Order. We developed a transparent and repeatable method to identify aquaculture opportunity areas (AOAs) with the least conflict with protected species. First, we developed a generalized scoring approach for protected species that captures their vulnerability to adverse effects from anthropogenic activities using conservation status and demographic information. Next, we applied this approach to data layers for eight species listed under the Endangered Species Act, including five species of sea turtles, Rice’s whale, smalltooth sawfish, and giant manta ray. Next, we evaluated four methods for mathematically combining scores (i.e., Arithmetic mean, Geometric mean, Product, Lowest Scoring layer) to generate a combined protected species data layer. The Product approach provided the most logical ordering of, and the greatest contrast in, site suitability scores. Finally, we integrated the combined protected species data layer into a multi-criteria decision-making modeling framework for MSP. This process identified AOAs with reduced potential for protected species conflict. These modeling methods are transferable to other regions, to other sensitive or protected species, and for spatial planning for other ocean-uses.

PLoS ONE↗
USGS2018

The genetic network of greater sage-grouse: Range-wide identification of keystone hubs of connectivity

Genetic networks can characterize complex genetic relationships among groups of individuals, which can be used to rank nodes most important to the overall connectivity of the system. Ranking allows scarce resources to be guided toward nodes integral to connectivity. The greater sage-grouse (Centrocercus urophasianus) is a species of conservation concern that breeds on spatially discrete leks that must remain connected by genetic exchange for population persistence. We genotyped 5,950 individuals from 1,200 greater sage-grouse leks distributed across the entire species’ geographic range. We found a small-world network composed of 458 nodes connected by 14,481 edges. This network was composed of hubs—that is, nodes facilitating gene flow across the network—and spokes—that is, nodes where connectivity is served by hubs. It is within these hubs that the greatest genetic diversity was housed. Using indices of network centrality, we identified hub nodes of greatest conservation importance. We also identified keystone nodes with elevated centrality despite low local population size. Hub and keystone nodes were found across the entire species’ contiguous range, although nodes with elevated importance to network-wide connectivity were found more central: especially in northeastern, central, and southwestern Wyoming and eastern Idaho. Nodes among which genes are most readily exchanged were mostly located in Montana and northern Wyoming, as well as Utah and eastern Nevada. The loss of hub or keystone nodes could lead to the disintegration of the network into smaller, isolated subnetworks. Protecting both hub nodes and keystone nodes will conserve genetic diversity and should maintain network connections to ensure a resilient and viable population over time. Our analysis shows that network models can be used to model gene flow, offering insights into its pattern and process, with application to prioritizing landscapes for conservation.

Idaho, Wyoming, Montana, Utah, Nevada↗
USGS2021

Emerging dominance of Paratrochammina simplissima (Cushman and McCulloch) in the northern Gulf of Mexico following hydrologic and geomorphic changes

Grand Bay estuary in coastal Mississippi and Alabama (USA) has undergone significant geomorphic changes over the last few centuries as a result of anthropogenic (bridge, road, and hardened shoreline construction) and climatic (extreme storm events) processes, which reduce freshwater input, sediment supply, and degrade barrier islands. To investigate how geomorphic changes may have altered the Grand Bay estuary, sediment push cores were collected for foraminiferal, sedimentological (organic matter content, grain-size distribution), and radiochemical ( 210 Pb, 137 Cs, and 7 Be) analyses. Clay normalized geochronologies were determined with a constant rate of supply model. Based on downcore age-depth relationships, select intervals were analyzed for foraminifera in order to assess alterations in the microfossil assemblage in Grand Bay estuary over the 20th Century. All estuarine samples were low diversity (species richness: 1–10; Fisher's alpha diversity: 0.14–1.75); two species, Ammotium salsum and Paratrochammina simplissima, dominated all downcore assemblages. Paratrochammina simplissima increased in abundance up-core from a minor subsidiary species (median = 4.7% at 19–20 cm) to dominant or co-dominant with A. salsum over the 20th and early 21st Centuries in six cores, comprising up to 60.7% of a single sample. The emerging dominance of P. simplissima since ~1950 along with the reduction of brackish-estuarine taxa and introduction of calcareous species signifies increased salinity and less marsh organic matter preserved in the sediments. While seasonal dissolution limits our ability to chronologically constrain the introduction of calcareous species, P. simplissima , a species not referenced in taxonomic data from the northern Gulf of Mexico until 2012, is well constrained, following its first occurrence in the 1930s.

Mississippi↗
USGS2021

Population genomics of free-ranging Great Plains white-tailed and mule deer reflects a long history of interspecific hybridization

Hybridization is a natural process at species-range boundaries that may variably promote the speciation process or break down species barriers but minimally will influence management outcomes of distinct populations. White-tailed deer ( Odocoileus virginianus ) and mule deer ( Odocoileus hemionus ) have broad and overlapping distributions in North America and a recognized capacity for interspecific hybridization. In response to contemporary environmental change to any of one or multiple still-unknown factors, mule deer range is contracting westward accompanied by a westward expansion of white-tailed deer, leading to increasing interactions, opportunities for gene flow, and associated conservation implications. To quantify genetic diversity, phylogenomic structure, and dynamics of hybridization in sympatric populations of white-tailed and mule deer, we used mitochondrial cytochrome b data coupled with SNP loci discovered with double-digest restriction site-associated DNA sequencing. We recovered 25,018 SNPs across 92 deer samples from both species, collected from two regions of western Kansas. Eight individuals with unambiguous external morphology representing both species were of hybrid origin (8.7%), and represented the product of multi-generational backcrossing. Mitochondrial data showed both ancient and recent directional discordance with morphological species assignments, reflecting a legacy of mule deer males mating with white-tailed deer females. Mule deer had lower genetic diversity than white-tailed deer, and both mitochondrial and nuclear data suggest contemporary mule deer effective population decline. Landscape genetic analyses show relative isolation between the two study regions for white-tailed deer, but greater connectivity among mule deer, with predominant movement from north to south. Collectively, our results suggest a long history of gene flow between these species in the Great Plains and hint at evolutionary processes that purge incompatible functional genomic elements as a result of hybridization. Surviving hybrids evidently may be reproductive, but with unknown consequences for the future integrity of these species, population trajectories, or relative susceptibility to emerging pathogens.

Kansas↗
USGS1977

Distribution and abundance of benthic organisms in the Sacramento River, California

General comparisons were made between benthic organism samples collected in 1960-61 and 1972-73 from five sites in the Sacramento River between Red Bluff and Knights Landing, Calif. The composition of benthic organisms from both collection periods was similar. The 1972-73 data showed variable patterns in monthly changes at each site and downstream changes each month with number of organisms per square meter, number of taxa per square meter, and diversity index. Generally, the mean number of taxa per square meter and diversity index for all sampling periods were higher in the upper reach than the lower reach of the Sacramento River. (Woodard-USGS)

California↗
USGS2016

Predictive mapping of seabirds, pinnipeds and cetaceans off the Pacific Coast of Washington

About this report This report supports Washington-led marine spatial planning and responsible stewardship of natural and cultural resources by the Olympic Coast National Marine Sanctuary. Washington state agencies and the sanctuary continually seek the best available science to improve management of marine uses and stewardship of resources (Etheridge et al., 2010; Washington Department of Fish and Wildlife, 2015a). This report and associated data provide new, state- and sanctuary-requested information on seabird, pinniped, and cetacean distributions. Through spatial planning, information on species distributions can help to identify high-value conservation areas, minimize adverse effects of ocean uses and mitigate impacts of coastal hazards. Correspondingly, the Washington Department of Fish and Wildlife has already begun to use the maps of predicted relative density presented in this report to identify ecologically important areas off the Pacific Coast of Washington and apply this information to plan for offshore renewable energy development. This is the culmination of three years of work to compile information on seabirds, pinnipeds, and cetaceans, and advance a modeling framework that can integrate data sets and develop accurate predictions of relative density for important species off the Pacific Coast of Washington. Previous reports, which evaluated existing datasets of at-sea observations (Menza et al., 2014; Kracker and Menza, 2015) and presented superseded versions of seabird models (Menza et al., 2015), provided base information for this report. In addition to the maps in this published report, all new seabird, pinniped and cetacean predictions will be made publicly available as digital geospatial data through the National Centers for Environmental Information. This research supports the National Oceanic and Atmospheric Administration (NOAA) Coastal Zone Management Program, a voluntary partnership between the federal government and U.S. coastal and Great Lakes states and territories authorized by the Coastal Zone Management Act (CZMA) of 1972 to address national coastal issues. The act provides the basis for protecting, restoring, and responsibly developing our nation’s diverse coastal communities and resources. To meet the goals of the CZMA, the national program takes a comprehensive approach to coastal resource management – balancing the often competing and occasionally conflicting demands of coastal resource use, economic development, and conservation. A wide range of issues are addressed through the program, including coastal development, water quality, public access, habitat protection, energy facility siting, ocean governance and planning, coastal hazards, and climate change. Accurate maps of seabird and marine mammal distributions are an important tool for making informed management decisions that affect all of these issues.

Washington↗
USGS2006

An assessment of flow data from Klamath River sites between Link River Dam and Keno Dam, south-central Oregon

Records of diversion and return flows for water years 1961?2004 along a reach of the Klamath River between Link River and Keno Dams in south-central Oregon were evaluated to determine the cause of a water-balance inconsistency in the hydrologic data. The data indicated that the reach was losing flow in the 1960s and 1970s and gaining flow in the 1980s and 1990s. The absolute mean annual net water-balance difference in flows between the first and second half of the 44-year period (1961-2004) was approximately 103,000 acre-feet per year (acre-ft/yr). The quality of the diversion and return-flow records used in the water balance was evaluated using U.S. Geological Survey (USGS) criteria for accuracy. With the exception of the USGS Klamath River at Keno record, which was rated as 'good' or 'excellent,' the eight other flow records, all from non-USGS flow-measurement sites, were rated as 'poor' by USGS standards due to insufficient data-collection documentation and a lack of direct discharge measurements to verify the rating curves. The record for the Link River site, the most upstream in the study area, included both river and westside power canal flows. Because of rating curve biases, the river flows might have been overestimated by 25,000 acre-ft/yr on average from water years 1961 to 1982 and underestimated by 7,000 acre-ft/yr on average from water years 1983 to 2004. For water years 1984-2004, westside power canal flows might have been underestimated by 11,000 acre-ft/yr. Some diversion and return flows (for mostly agricultural, industrial, and urban use) along the Klamath River study reach, not measured continuously and not included in the water-balance equation, also were evaluated. However, the sum of these diversion and return flows was insufficient to explain the water-balance inconsistency. The possibility that ground-water levels in lands adjacent to the river rose during water years 1961-2004 and caused an increase in ground-water discharge to the river also was evaluated. However, water-level data from local wells did not have a rising trend during the period. The most likely cause of the water-balance inconsistency was flow measurement error in the eight non-USGS flow records. Part of the water-balance inconsistency can be explained by a 43,000 acre-foot error in the river and canal flow portions of the Link River flow record. A remaining 60,000 acre-foot error might have been distributed among the seven other flow records, or much of the remaining 60,000 acre-foot error might have been in the Link River flow record because flows in that record had a greater magnitude than flows in the seven other records. As an additional analysis of the water-balance issue, flow records used in the water balance were evaluated for trends and compared to known changes in water management in the Bureau of Reclamation Klamath Project and Lower Klamath and Tule Lake National Wildlife Refuges over the 44-year period. Many of the water-management changes were implemented in the early 1980s. For three diversion flow records, 1983-2004 mean annual flows were 16,000, 8,000, and 21,000 acre-ft/yr greater than their 1961-82 mean annual flows. Return flows to the Klamath River at two flow-measurement sites decreased by 31,000 and 27,000 acre-ft/yr for 1983-2004 compared with the 1961-82 period.

Scientific Investigations Report↗
USGS2023

Detection and quantification of preferential flow using artificial rainfall with multiple experimental approaches

Preferential flow in the unsaturated zone strongly influences important hydrologic processes, such as infiltration, contaminant transport, and aquifer recharge. Because it entails various combinations of physical processes arising from the interactions of water, air, and solid particles in a porous medium, preferential flow is highly complex. Major research is needed to improve the ability to understand, quantify, model, and predict preferential flow. Toward a solution, a combination of diverse experimental measurements at multiple scales, from laboratory scale to mesoscale, has been implemented to detect and quantify preferential paths in carbonate and karstic unsaturated zones. This involves integration of information from (1) core samples, by means of mercury intrusion porosimeter, evaporation, quasi-steady centrifuge and dewpoint potentiometer laboratory methods, to investigate the effect of pore-size distribution on hydraulic characteristics and the potential activation of preferential flow, (2) field plot experiments with artificial sprinkling, to visualize preferential pathways related to secondary porosity, through use of geophysical measurements, and (3) mesoscale evaluation of field data through episodic master recession modeling of episodic recharge. This study demonstrates that preferential flow processes operate from core scale to two different field scales and impact on the qualitative and quantitative groundwater status, by entailing fast flow with subsequent effects on recharge rate and contaminant mobilizing. The presented results represent a rare example of preferential flow detection and numerical modeling by reducing underestimation of the recharge and contamination risks.

Bari↗
USGS2026

Organic and isotopic indicators for sorting of sedimentary organic matter along a marginal submarine canyon

Submarine canyons are incised features of many continental margins that can have significant influence on the hydrodynamic distribution of sediments and organic matter eroded and deposited from the continents. Baltimore Canyon, on the mid-Atlantic margin of the United States, contains a complex set of sedimentary processes that simultaneously create unique benthic habitats and control the deposition of organic matter. Along the canyon axis, loci of net erosion, net deposition, and intense winnowing each host diverse faunal assemblages and varying mixtures of sedimentary organic matter derived both from production in the overlying water column and from mobilized sediments. Bioavailable components of this deposited organic matter sustain benthic communities, while recalcitrant components can contribute to long-term carbon burial in the deep sea. However, commonly employed bulk geochemical analyses provide little information about the relative bioavailability or depositional history of sedimentary organic matter. Here we employ a range of organic and isotopic analyses to explore in more detail how canyon-specific sediment dynamics determine the sorting of organic matter from shelf to open ocean. In combination with bulk geochemical characteristics, we subjected surface sediments from water depths of ∼200–1200 m in Baltimore Canyon to a sequential extraction procedure, isolating nonpolar and polar lipid classes, an acid-soluble fraction, and an acid-insoluble fraction. Each class was analyzed for carbon and nitrogen quantities and stable isotope ratios, and radiocarbon content where possible, along with compound-specific carbon and nitrogen isotope analysis of individual amino acids in the acid-hydrolysed fraction. We find different organic matter sources and depositional history recorded in the properties of younger, bioavailable organic matter components (polar lipids, amino acids) in comparison to the older, more recalcitrant components (nonpolar lipids, acid-insoluble fraction). These differences in source and bioavailability of organic matter vary along the canyon, correlating with grain size and erosion/deposition dynamics, and may help shape the benthic faunal assemblages. Additionally, our results suggest that determining the relative concentrations of acid-soluble and acid-insoluble organic matter may provide an easily accessible method to improve our understanding of the nutritional quality of sediments for benthic fauna than more commonly used bulk carbon or nitrogen concentrations.

Delaware, New Jersey↗