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An interactive program to display user-generated or file-based maps on a personal computer monitor

PC MAP-MAKER is an ADVANCED BASIC program written to provide users of IBM XT, IBM AT, and compatible computers with a straight-forward, flexible method to display geographical data on a color or monochrome PC (personal computer) monitor. Data can be political boundaries such as State and county boundaries; natural curvilinear features such as rivers, drainage areas, and geological contacts; and points such as well locations and mineral localities. Essentially any point defined by a latitude and longitude and any line defined by a series of latitude and longitude values can be displayed using the program. PC MAP MAKER allows users to view tabular data from U.S. Geological Survey files such as WATSTORE (National Water Data Storage and Retrieval System) in a map format in a time much shorter than required by sending the data to a line plotter. The screen image can be saved to disk for recall at a later date, and hard copies can be printed with a dot matrix printer. The program is user-friendly, using menus or prompts to guide user input. It is fully documented and structured to allow the user to tailor the program to the user 's specific needs. The documentation includes a tutorial designed to introduce users to the capabilities of the program using the State of Colorado as a demonstration map area. (Author 's abstract)

Open-File Report↗

Hydrogeology of the Susquehanna River valley-fill aquifer system in the towns of Conklin and Kirkwood, Broome County, New York

The hydrogeology of the Susquehanna River valley-fill aquifer system and adjacent areas in south-central Broome County, New York, was investigated in cooperation with the New York State Department of Environmental Conservation. The study area encompasses roughly 55.5 square miles and includes the towns of Conklin and Kirkwood. Multiple small, perhaps discontinuous, valley-fill aquifers of unknown extent and hydraulic interconnection underlie the Susquehanna River valley from easternmost Binghamton south to Riverside, New York, near the Pennsylvania border. The hydrogeologic framework of these aquifers is described in this report on the basis of existing descriptions of surficial materials, especially those related to deglaciation, and subsurface data extracted from well and boring logs. A compilation of surficial geology, the descriptions of the spatial distribution of confined and unconfined aquifers, hydrogeologic sections, and well locations is provided as an oversized map plate and in a U.S. Geological Survey data release. Residential households are one of the principal consumers of groundwater in the study area. Approximately half of these households are served by public water-supply systems that obtain water from wells, chiefly from highly productive but small and likely discontinuous surficial deposits of sand and gravel, while others obtain water from sand-and-gravel aquifers beneath till and (or) fine-grained lacustrine deposits, and a few from bedrock. Residents outside the public-supply service areas rely on private wells. In till-mantled upland areas, nearly all private wells tap bedrock. Water-resource potential is likely greatest north of Kirkwood Center, New York, where the valley is narrowest, and local aquifers are in thick stratified glacial deposits. Well yields are highest in this part of the valley, and the local aquifer system is likely replenished through induced infiltration from the Susquehanna River and numerous small tributaries. The area between Langdon and Kirkwood is filled with a mixture of stratified and unstratified glacial sediments and contains one high-yield well. This area likely has moderate water-resource potential, but limited well data make this difficult to verify. Well yields from suitable stratified glacial sediments generally decrease southward toward Riverside, New York. Characterizing potential groundwater resources is also helpful for prioritizing source-water-protection efforts. Water resources throughout New York are at risk of contamination from commercial and industrial surface activities. As in many valley areas throughout the Susquehanna River watershed in south-central New York, valley wells with depths greater than roughly 100 to 150 feet are susceptible to contamination by naturally occurring saltwater and methane. New York currently has a moratorium on hydraulic fracturing, but the study area is underlain by rocks suitable for unconventional methods of gas production that would likely be initiated if the moratorium were to be lifted.

New York↗

Effects of environment and metacommunity delineation on multiple dimensions of stream fish beta diversity

Introduction: Beta diversity represents changes in community composition among locations across a landscape. While the effects of human activities on beta diversity are becoming clearer, few studies have considered human effects on the three dimensions of beta diversity: taxonomic, functional, and phylogenetic. Including anthropogenic factors and multiple dimensions of biodiversity may explain additional variation in stream fish beta diversity, providing new insight into how metacommunities are structured within different spatial delineations. Methods: In this study, we used a 350 site stream fish abundance dataset from South Carolina, United States to quantify beta diversity explainable by spatial, natural environmental, and anthropogenic variables. We investigated three spatial delineations: (1) a single whole-state metacommunity delineated by political boundaries, (2) two metacommunities delineated by a natural geomorphic break separating uplands from lowlands, and (3) four metacommunities delineated by natural watershed boundaries. Within each metacommunity we calculated taxonomic, functional, and phylogenetic beta diversity and used variation partitioning to quantify spatial, natural environmental, and anthropogenic contributions to variations in beta diversity. Results: We explained 25–81% of the variation in stream fish beta diversity. The importance of these three factors in structuring metacommunities differed among the diversity dimensions, providing complementary perspectives on the processes shaping beta diversity in fish communities. The effect of spatial, natural environmental, and anthropogenic factors varied among the spatial delineations, which indicate conclusions drawn from variation partitioning may depend on the spatial delineation chosen by researchers. Discussion: Our study highlights the importance of considering human effects on metacommunity structure, quantifying multiple dimensions of beta diversity, and careful consideration of user-defined metacommunity boundaries in beta diversity analyses.

South Carolina↗

Arsenic in ground water: A review of current knowledge and relation to the CALFED solution area with recommendations for needed research

Ground water with arsenic concentrations greater than the U.S. Environmental Protection Agency drinking water standard exists throughout much of the CALFED solution area. These high concentrations are of con-cern from the standpoint of both existing water supply and development of conjunctive use projects. Much is known about arsenic mobility in ground water subject to different hydrologic and geochemical conditions. However, some important knowledge gaps exist that limit the ability to design water supply projects that could prevent arsenic mobilization or promote arsenic removal from ground water. A few well studied sys-tems could provide a much better understanding of methods for preventing or eliminating high arsenic problems. Within the context of the examination of a few detailed field studies, some important research needs include: 1.) Determining the significance of metal-bridging aqueous complexes involving inorgan-ic arsenic and natural organic matter, 2.) In the con-text of in situ remediation, determining whether of metal oxides. Little is known about the quantitative significance competition of inorganic arsenic with other inorganic aqueous species in natu-ral systems. Experiments should be conducted with actual aquifer materials, as the effects of aging on arsenic desorption in laboratory studies are quite sig-nificant. 3.) Devise methods to detect and quantify rates of oxidation/reduction reactions of arsenic that are carried out by microorganisms at ambient concen-trations of arsenic and under in situ conditions. The findings from detailed field studies have the potential for greatly reducing the cost of meeting the new drinking-water standard for arsenic. The research would benefit a broad constituency.

San Francisco Estuary and Watershed Science↗

Guide to per- and polyfluoroalkyl substances (PFAS) sampling within Natural Resource Damage Assessment and Restoration

Per- and polyfluoroalkyl substances (PFAS) are synthetic chemicals with a nondegradable fluorinated carbon backbone that have been incorporated in countless industrial and commercial applications. Because PFAS are nondegradable, they have been detected in all environmental media, indicating extensive global contamination. The unique physiochemical properties of PFAS and their complex interactions with environmental matrices create a great challenge for researchers when selecting site-specific sample matrices, sampling logistics, various analytical methods, and data interpretation. The widespread contamination and the potential toxicity of PFAS to human and environmental health have resulted in the proposed designation of two commonly used PFAS as hazardous substances, which may prompt new requirements for reporting, regulatory action, and site cleanup. For researchers involved in natural resource damage assessment efforts, understanding the multifaceted dynamics of the environmental fate and transport of PFAS will be essential for appropriate sample collections, analyses, and data interpretation. This guide aims to provide fundamental concepts and considerations involved with environmental sampling for PFAS during site assessments.

Open-File Report↗

Understanding organic matter heterogeneity and maturation rate by Raman spectroscopy

Solid organic matter (OM) in sedimentary rocks produces petroleum and solid bitumen when it undergoes thermal maturation. The solid OM is a ‘geomacromolecule’, usually representing a mixture of various organisms with distinct biogenic origins, and can have high heterogeneity in composition. Programmed pyrolysis is a common method to reveal bulk geochemical characteristics of the dominant OM, while detailed organic petrography is required to reveal information about the biogenic origin of contributing macerals. Despite the advantages of programmed pyrolysis, it cannot provide information about the heterogeneity of chemical compositions present in the individual OM types. Therefore, other analytical techniques such as Raman spectroscopy are necessary. In this study, we compared geochemical characteristics and Raman spectra of two sets of naturally and artificially matured Bakken source rock samples. A continuous Raman spectral map on solid bitumen particles was created from the artificially matured hydrous pyrolysis residues, in particular, to show the systematic chemical modifications in microscale. Spectroscopic data was plotted for both sets against thermal maturity to compare maturation rate/path for these two separate groups. The outcome showed that artificial maturation through hydrous pyrolysis does not follow the same trend as naturally-matured samples although having similar solid bitumen reflectance values (%SBRo). Furthermore, Raman spectroscopy of solid bitumen from artificially matured samples indicated the heterogeneity of OM decreases as maturity increases. This may represent an alteration in chemical structure towards more uniform compounds at higher maturity. This study may emphasize the necessity of using analytical methods such as Raman spectroscopy along with conventional geochemical methods to better reveal the underlying chemical structure of OM. Finally, observation by Raman spectroscopy of chemical alteration of OM during artificial maturation may assist in the proposal of improved pyrolysis protocols to better resemble natural geologic processes.

North Dakota↗

Lithodiversity and its spatial association with metallic mineral sites, Great Basin of Nevada

Geographical information system (GIS) techniques were used to investigate the spatial association between metallic mineral sites and lithodiversity in Nevada. Mineral site data sets include various size and type subsets of about 5,500 metal-bearing occurrences and deposits. Lithodiversity was calculated by counting the number of unique geological map units within four sizes of square-shaped sample neighborhoods (2.5-by-2.5, 5-by-5, 10-by-10, and 20-by-20 km) on three different scales of geological maps (national, 1:2,500,000; state, 1:500,000; county, 1:250,000). The spatial association between mineral sites and lithodiversity was observed to increase with increasing lithodiversity. This relationship is consistent for (1) both basin-range and range-only regions, (2) four sizes of sample neighborhoods, (3) various mineral site subsets, (4) the three scales of geological maps, and (5) areas not covered by large-scale maps. A map scale of 1:500,000 and lithodiversity sampling neighborhood of 5-by-5 km was determined to best describe the association. Positive associations occurred for areas having >3 geological map units per neighborhood, with the strongest observed at approximately >7 units. Areas in Nevada with more than three geological map units per 5-by-5 km neighborhood contain more mineral sites than would be expected resulting from chance. High lithodiversity likely reflects the occurrence of complex structural, stratigraphic, and intrusive relationships that are thought to control, focus, localize, or expose mineralization. The application of lithodiversity measurements to areas that are not well explored may help delineate regional-scale exploration targets and provide GIS-supported mineral resource assessment and exploration activity another method that makes use of widely available geological map data.

Nevada↗

Introduction and methods of analysis for peak streamflow trends and their relation to changes in climate in Illinois, Iowa, Michigan, Minnesota, Missouri, Montana, North Dakota, South Dakota, and Wisconsin

Flood-frequency analysis, also called peak-flow frequency or flood-flow frequency analysis, is essential to water resources management applications including critical structure design and floodplain mapping. Federal guidelines for doing flood-frequency analyses are presented in a U.S. Geological Survey Techniques and Methods Report known as Bulletin 17C. A basic assumption within Bulletin 17C is that for drainage basins without major hydrologic alterations, statistical properties of the distribution of annual peak streamflows (peak flows) are stationary; that is, the mean, variance, and skew are constant. The stationarity assumption has been widely accepted within the flood-frequency community; however, a better understanding of long-term climatic persistence and concerns about potential climate change and land-use change has caused a reexamination of the stationarity assumption. Flood-frequency analyses that do not incorporate observed trends and abrupt changes may result in a poor representation of the true flood risk. Bulletin 17C does not offer guidance for incorporating nonstationarities when estimating floods, and it describes a need for studies that incorporate changing climate or basin characteristics. In response to this need and a history of concern regarding nonstationarity peak flows in the region, this study was done by the U.S. Geological Survey, in cooperation with the Departments of Transportation of Illinois, Iowa, Michigan, Minnesota, Missouri, South Dakota, and Wisconsin; the Montana Department of Natural Resources and Conservation; and the North Dakota Department of Water Resources, to assess potential nonstationarity in peak flows in the north-central United States. This chapter summarizes the methods used to detect hydroclimatic changes in peak-flow data in the study region. A wide range of analyses and statistical approaches are applied to document the primary mechanisms controlling floods and characterize temporal changes in hydroclimatic variables and peak flow. Four periods were selected for analysis of peak flow, daily streamflow, and climate data. The periods are (1) a 100-year period, 1921–2020; (2) a 75-year period, 1946–2020; (3) a 50-year period, 1971–2020; and (4) a 30-year period, 1991–2020. The climate data consist of monthly time series estimates of temperature, precipitation, potential evapotranspiration, actual evapotranspiration, snowfall, soil moisture storage, snow water equivalent, and runoff on a 3.1-mile by 3.1-mile grid for the conterminous United States. Statistical and graphical analyses were used to investigate potential changes in hydrology and climate. The starting point for these analyses was the initial data analysis of peak flow described in Bulletin 17C, which includes plotting the peak flow and checking for autocorrelation, monotonic trends, and changes points. Analyses were added to examine additional features in the data. To examine potential causal drivers of changes, the climate data were analyzed graphically and statistically. Results are provided in a U.S. Geological Survey data release. The study limitations are documented for users of the results.

Iowa, Illinois, Michigan, Missouri, Minnesota, Mon↗

Methods for estimating streamflow characteristics at ungaged sites in western Montana based on data through water year 2009: Chapter G in Montana StreamStats

The U.S. Geological Survey, in cooperation with the Montana Department of Environmental Quality and the Montana Department of Natural Resources and Conservation, developed regional regression equations based on basin and streamflow characteristics for streamflow-gaging stations through water year 2009 that can be used to estimate streamflow characteristics for ungaged sites in western Montana. The regression equations allow estimation of low-flow frequencies; mean annual and mean monthly streamflows; and the 20-, 50-, and 80-percent durations for annual and monthly duration streamflows for ungaged sites in western Montana that are unaffected by regulation. Regression equations were developed for 54 streamflow characteristics in each of the 4 hydrologic regions generally located in western Montana. Exploratory data analyses determined that of the 40 basin characteristics used as explanatory variables, only 3 were significant in the final equations. These three basin characteristics are contributing drainage area, mean annual precipitation of the drainage basin, and percentage of basin with slopes greater than 50 percent. Low-flow frequency data and daily mean streamflow data from 152 streamflow-gaging stations were used to develop the regression equations. These 152 streamflow-gaging stations were considered to be unregulated (or only the unregulated period of record for regulated streamflow-gaging stations were used). For this study, a streamflow-gaging station is considered to be unregulated if cumulative drainage area upstream from all upstream dams is less than 20 percent of the drainage basin for the streamflow-gaging station, and if no large diversion canals are upstream from the streamflow-gaging station. In addition to the regional regression equations, two methods for estimating streamflow characteristics based on drainage areas of a nearby streamflow-gaging station are provided. Also, spreadsheet tools are provided for calculating streamflow characteristics based on regression equations or the drainage-area ratio method. All of the data used to calculate basin characteristics were derived from publicly available data sources and are available through the U.S. Geological Survey Streamstats program ( http://water.usgs.gov/osw/streamstats/ ) for Montana. The primary purpose of the Montana StreamStats application is to provide estimates of basin characteristics and streamflow characteristics for user-selected ungaged sites on Montana streams. The regional regression equations presented in this report have been loaded to the Montana StreamStats application and can be used to derive streamflow characteristics for ungaged sites.

Montana↗

Inter-laboratory variation in the chemical analysis of acidic forest soil reference samples from eastern North America

Long-term forest soil monitoring and research often requires a comparison of laboratory data generated at different times and in different laboratories. Quantifying the uncertainty associated with these analyses is necessary to assess temporal changes in soil properties. Forest soil chemical properties, and methods to measure these properties, often differ from agronomic and horticultural soils. Soil proficiency programs do not generally include forest soil samples that are highly acidic, high in extractable Al, low in extractable Ca and often high in carbon. To determine the uncertainty associated with specific analytical methods for forest soils, we collected and distributed samples from two soil horizons (Oa and Bs) to 15 laboratories in the eastern United States and Canada. Soil properties measured included total organic carbon and nitrogen, pH and exchangeable cations. Overall, results were consistent despite some differences in methodology. We calculated the median absolute deviation (MAD) for each measurement and considered the acceptable range to be the median 6 2.5 3 MAD. Variability among laboratories was usually as low as the typical variability within a laboratory. A few areas of concern include a lack of consistency in the measurement and expression of results on a dry weight basis, relatively high variability in the C/N ratio in the Bs horizon, challenges associated with determining exchangeable cations at concentrations near the lower reporting range of some laboratories and the operationally defined nature of aluminum extractability. Recommendations include a continuation of reference forest soil exchange programs to quantify the uncertainty associated with these analyses in conjunction with ongoing efforts to review and standardize laboratory methods.

Ecosphere↗

Intramolecular carbon isotope geochemistry of butane isomers from laboratory maturation and Monte-Carlo simulations of kerogen types I, II, and III

Position-specific (PS) carbon isotope compositions of light hydrocarbons such as propane and butane isomers (n-butane and i-butane) can provide a wealth of information on the history of natural gases in the subsurface reservoirs and other environments. For PS carbon isotope analysis of butane isomers, we have established a GC-pyrolysis-GC-isotope ratio mass spectrometry method with demonstrated accuracy. With this method, we analyzed PS δ 13 C values of butane isomers generated from the systematic laboratory pyrolysis experiments of three different kerogen types (I, II, and III) at temperatures of 310–430 °C with corresponding thermal maturity (Easy %R o ) ranging from 0.7 to 3.3. The observed evolution in the abundances of butane isomers can be interpreted and semi-quantitatively modeled based on the abundances of different C C bonds within the kerogens at low maturity and thermal degradation of butane isomers at high maturity. The δ 13 C values at the central sites of both nC 4 and iC 4 were heavier than those at the terminal positions, similar to our previous observations of propane. Their isotopic evolution with the maturity were controlled largely by kinetic isotope effects associated with breaking of different C C bonds during the generation and degradation of butane isomers. Kinetic Monte Carlo (kMC) simulations of n-butane generated from thermal cracking of model kerogens (I, II, and III) and an oil with a series of reactions (homolytic cleavage, β-scission, radical isomerization, H-abstraction, and termination by radical recombination) provided generally consistent results with the experimental observations, although the difference in PS δ 13 C values between the central and terminal positions are somewhat overestimated. On the other hand, the kMC simulation with homolytic cleavage and capping reactions alone produced significant deviations from the experimental results. Re-assessment of very limited data of PS δ 13 C values of natural butanes with our experimental and simulation results show that biodegradation significantly increased δ 13 C values at the central positions, not only of propane, but also of both butane isomers. This study lays a foundation and demonstrates the potential of PS isotope geochemistry of butane isomers to further improve our understanding of the sources, and geochemical and microbial processes of light hydrocarbons in the subsurface and other natural environments.

Geochimica et Cosmochimica Acta↗

Lake Trout population dynamics in the Northern Refuge of Lake Michigan: Importance of stocking rate

Objective The Northern Refuge of Lake Michigan was established under the auspices of the Great Lakes Fishery Commission in 1985 as an additional step toward restoring a self‐sustaining Lake Trout Salvelinus namaycush population to the lake. The overall goal of our study was to assess progress toward Lake Trout rehabilitation in the Northern Refuge through 2021. Methods We conducted annual (1992–2021) gill‐net surveys in the fall to assess the adult population and beam trawl surveys in the spring to assess naturally reproduced age‐0 Lake Trout. Result Spawner abundance averaged 45 fish • 305 m of gill net −1 • day −1 during 1992–1999, just 4 fish • 305 m of gill net −1 • day −1 during 2000–2014, and then 67 fish • 305 m of gill net −1 • day −1 during 2018–2021. Sea Lamprey Petromyzon marinus wounding rate decreased by nearly 90% between the 2000–2014 and 2015–2021 periods. The average annual mortality rate of adult Lake Trout decreased from 43% during the 1990s and 2000s to 22% during 2015–2021. All of these population dynamics were partly driven by changes in Lake Trout stocking rates, which declined by roughly 50% during 1994–1996 but then increased roughly twofold during 2006–2010 and remained at this higher level during 2010–2018. In 2021, early signs of natural recruitment of Lake Trout became evident. Beam trawling during June 2021 yielded a wild age‐0 Lake Trout, the first ever caught since the surveys began in 1992. In addition, 15 (4% of total catch) of the Lake Trout caught in the fall 2021 gill‐net survey were unclipped (wild) fish. Estimated ages of these wild fish indicated that natural recruitment had begun sometime around 2015. Conclusion With Alewife Alosa pseudoharengus abundance in Lake Michigan at record low levels, Sea Lamprey wounding rate greatly reduced, and Lake Trout spawner abundance at relatively high levels, the outlook for Lake Trout rehabilitation in the Northern Refuge holds promise.

Northern Refuge of Lake Michigan↗

Aeromagnetic investigations of hazardous waste sites

Aeromagnetic survey data collected by helicopter over hazardous waste sites can be used to map the distribution of buried metallic (ferrous) objects at these sites, including drums and scrap metal. Thorough knowledge of the locations and nature of hazardous waste containers and contaminated objects is needed prior to the start of remediation efforts. Non-invasive geophysical techniques such as the aeromagnetic method provide the best way to obtain this knowledge. The U.S. Geological Survey (USGS) not only has experience in processing and interpreting aeromagnetic surveys of this type but also offers aid in the design and monitoring of contracts for such surveys.

Fact Sheet↗

Isotropic, anisotropic, and borehole washout analyses in Gulf of Mexico Gas Hydrate Joint Industry Project Leg II, Alaminos Canyon well 21-A

Through the use of three-dimensional seismic amplitude mapping, several gas hydrate prospects were identified in the Alaminos Canyon area of the Gulf of Mexico. Two of the prospects were drilled as part of the Gulf of Mexico Gas Hydrate Joint Industry Program Leg II in May 2009, and a suite of logging-while-drilling logs was acquired at each well site. Logging-while-drilling logs at the Alaminos Canyon 21–A site indicate that resistivities of approximately 2 ohm-meter and P-wave velocities of approximately 1.9 kilometers per second were measured in a possible gas-hydrate-bearing target sand interval between 540 and 632 feet below the sea floor. These values are slightly elevated relative to those measured in the hydrate-free sediment surrounding the sands. The initial well log analysis is inconclusive in determining the presence of gas hydrate in the logged sand interval, mainly because large washouts in the target interval degraded well log measurements. To assess gas-hydrate saturations, a method of compensating for the effect of washouts on the resistivity and acoustic velocities is required. To meet this need, a method is presented that models the washed-out portion of the borehole as a vertical layer filled with seawater (drilling fluid). Owing to the anisotropic nature of this geometry, the apparent anisotropic resistivities and velocities caused by the vertical layer are used to correct measured log values. By incorporating the conventional marine seismic data into the well log analysis of the washout-corrected well logs, the gas-hydrate saturation at well site AC21–A was estimated to be in the range of 13 percent. Because gas hydrates in the vertical fractures were observed, anisotropic rock physics models were also applied to estimate gas-hydrate saturations.

Scientific Investigations Report↗

Water quality of the Neuse River, North Carolina: Variability, pollution loads, and long-term trends

A water-quality study of the Neuse River, N.C., based on data collected during 1956-77 at the U.S. Geological Survey stations at Clayton and Kinston, employs statistical trend analysis techniques that provide a framework for river quality assessment. Overall, water-quality of the Neuse River is satisfactory for most uses. At Clayton, fecal coliform bacteria and nutrient levels are high, but algae and total-organic-carbon data indicate water-quality improvement in recent years, due probably to a new wastewater treatment plant located downstream from Raleigh, N.C. Pollution was determined by subtracting estimated natural loads of constituents from measured total loads. Pollution makes up approximately 50% of the total dissolved material transported by the Neuse. Two different data transformation methods allowed trends to be identified in constituent concentrations. The methods recomputed the concentrations as if they were determined at a constant discharge over the period of record. Although little change since 1956 can be seen in most constituents, large changes in some constituents, such as increases in potassium and sulfate, indicate that the water quality of the Neuse River has noticeably deteriorated. Increases in sulfate are probably largely due to increased long-term inputs of sulfur compounds from airborne pollutants.

North Carolina↗

Determination of beta activity in water

Many elements have one or more naturally radioactive isotopes, and several hundred other radionuclides have been produced artificially. Radioactive substances may be present in natural water as a result of geochemical processes or the release of radioactive waste and other nuclear debris to the environment. The Geological Survey has developed methods for measuring certain of these .radioactive substances in water. Radioactive substances often are present in water samples in microgram quantities or less. Therefore, precautions must be taken to prevent loss of material and to assure that the sample truly represents its source at the time of collection. Addition of acids, complexing agents, or stable isotopes often aids in preventing loss of radioactivity on container walls, on sediment, or on other solid materials in contact with the sample. The disintegration of radioactive atoms is a random process subject to established methods of statistical analysis. Because many water samples contain small amounts of radioactivity, low-level counting techniques must be used. The usual assumption that counting data follow a Gaussian distribution is invalid under these conditions, and statistical analyses must be based on the Poisson distribution. The gross beta activity in water samples is determined from the residue left after evaporation of the sample to dryness. Evaporation is accomplished first in a teflon dish, then the residue is transferred with distilled water to a counting planchet and again is reduced to dryness. The radioactivity on the planchet is measured with an anticoincidence-shielded, low-background, beta counter and is compared with measurements of a strontium-90-yttrium-90 standard prepared and measured in the same manner. Control charts are used to assure consistent operation of the counting instrument.

Water Supply Paper↗

Understanding the Avian-Impact Offset Method—A tutorial

Biodiversity offsetting, or compensatory mitigation, is increasingly being used in temperate grassland and wetland ecosystems to compensate for unavoidable environmental damage from anthropogenic disturbances such as energy development and road construction. Energy-extraction and -generation facilities continue to proliferate across the natural landscapes of the United States, yet mitigation tools to ameliorate the negative behavioral effects on wildlife from these types of facilities are rarely implemented. Scientists from the U.S. Geological Survey conducted a 10-year before-after-control-impact (commonly referred to as BACI) study that evaluated the displacement effects of wind facilities on breeding grassland birds. The study determined behavioral avoidance for 7 of 9 species. This research is notable because of its design, geographical scope, and duration, which allowed for the determination of immediate, short-term effects; delayed or sustained effects; and discrete distances at which effects occurred. In addition, the U.S. Fish and Wildlife Service and Ducks Unlimited conducted a 3-year concurrent-year paired-reference study to determine behavioral avoidance for five species of dabbling ducks. By quantifying displacement rate from these two studies, U.S. Geological Survey and U.S. Fish and Wildlife Service scientists developed the Avian-Impact Offset Method (AIOM) to quantify and compensate for loss in value of breeding habitat. The AIOM converts the biological value (that is, number of bird pairs) lost by way of avoidance and estimates the site-specific number of hectares of grasslands and number of wetlands needed to compensate for displaced pairs of grassland birds and waterfowl. By converting biological value to traditional units of measure in which land is described and purchased or sold, the AIOM lends itself readily to the delivery of offsetting measures such as easement protections and restoration projects. The AIOM tool is applicable to wind, solar, oil, gas, and transportation infrastructure. This tutorial was designed to increase awareness of the AIOM and to promote its proper application. The tutorial is divided into four sections, each of which explains a discrete topic concerning aspects of behavioral displacement. The first section provides geographical and biological context, and the second section describes the field and statistical methods and results. The third section provides step-by-step instructions for applying the AIOM to several scenarios involving grassland birds or waterfowl at wind or oil facilities. The fourth section describes decision-support tools created to implement the AIOM. The appendices provide the actual field protocols constituting the methods for the research, provide detailed results by species and wind facility for that research, and provide detailed instructions for downloading and applying the decision-support tools.

Open-File Report↗

A method adapting microarray technology for signature tagged mutagenesis of Dusulfovibrio dusulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments

Signature-tagged mutagenesis (STM) is a powerful technique that can be used to identify genes expressed by bacteria during exposure to conditions in their natural environments. To date, there have been no reports of studies in which this approach was used to study organisms of environmental, rather than pathogenic, significance. We used a mini-Tn 10 transposon-bearing plasmid, pBSL180, that efficiently and randomly mutagenized Desulfovibrio desulfuricans G20 in addition to Shewanella oneidensis MR-1. Using these organisms as model sediment-dwelling anaerobic bacteria, we developed a new screening system, modified from former STM procedures, to identify genes that are critical for sediment survival. The screening system uses microarray technology to visualize tags from input and output pools, allowing us to identify those lost during sediment incubations. While the majority of data on survival genes identified will be presented in future papers, we report here on chemotaxis-related genes identified by our STM method in both bacteria in order to validate our method. This system may be applicable to the study of numerous environmental bacteria, allowing us to identify functions and roles of survival genes in various habitats.

Applied and Environmental Microbiology↗