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Physics to fish—Understanding the factors that create and sustain native fish habitat in the San Francisco Estuary

Executive Summary The Bureau of Reclamation (Reclamation) operates the Central Valley Project (CVP), one of the nation’s largest water projects. Reclamation has an ongoing need to improve the scientific basis for adaptive management of the CVP and, by extension, joint operations with California’s State Water Project. The U.S. Geological Survey (USGS) works cooperatively with the Bureau of Reclamation to provide scientific support for the management of Reclamation’s CVP project. Major habitat restoration efforts and a new water-diversion point are planned to benefit delta smelt ( Hypomesus transpacificus ) and other species of concern while ensuring the reliability of water supply. In addition, various flow actions and management activities have been identified as possible methods to increase populations of delta smelt and salmonid ( Oncorhynchus spp.) runs of concern. The overarching goal of this cooperative project was to provide Reclamation with the scientific information needed to evaluate the efficacy of ongoing and future adaptive management actions and to improve the scientific basis for more flexible CVP operations that would achieve water-supply reliability and fish protection. The research and monitoring described in this report comprises the period 2015–19 and focuses on management issues related to native fish species of concern, especially delta smelt. Conserving the delta smelt population while providing a reliable water supply is a primary management and policy issue in California. Our approach for this cooperative project is based on the “physics to fish” concept, the idea that high-quality habitat is generated and sustained by the interaction between physical processes and the landscape. These interactions create a template for chemical and biological processes that can change across a variety of spatial and temporal scales. Following this concept, this project (hereafter referred to as “the physics to fish project”) included monitoring and studies of water flows, sediments, water quality, and invertebrate and fish dynamics across a range of spatial and temporal scales and in regions relevant to resource managers tasked with managing water supplies and ecosystem health in the San Francisco Estuary. The intent of this approach was to document the habitat conditions, important processes, and interactions among them that create high-quality habitat for native fishes so that the likely effects of future management actions (for example, habitat restoration) can be objectively assessed at the local (site-specific), regional (within subregions of the estuary), and landscape (across the entire estuary and beyond) scales. Hydrodynamically, the upper estuary (landward of Carquinez Strait) is characterized by a fixed volume of tidally exchanged water (for example, tidal prism) that interacts with the existing channel network and bathymetry to create regions with differing hydrodynamics. Our results indicate that careful study of construction or reoperation of existing infrastructure to perform management actions can help (1) improve the accuracy of hydrodynamic models; (2) further understanding of ecological effects; and (3) enhance abilities to predict ecological outcomes. At the local scale, we developed a new concept called the Lagrangian to Eulerian (LE) ratio that can be used as a tool for understanding the importance of various hydrodynamic processes in specific channels or channel networks and for forecasting transport dynamics. Channels with LE ratios<1 in a channel network or in a dead-end slough are hydrodynamically able to develop an exchange zone between two parcels of water that may have different chemical and physical properties. In a dead-end channel, there is a landward region with long residence time (no-exchange zone) and a seaward region with short residence time (high-exchange zone) that are well mixed with seaward waters. At the transition (exchange zone) between the high and no-exchange regions, a gradient will form in water-quality constituents that differ in concentration between the landward and seaward waters. Turbidity affects fish habitat and has declined through time in the San Francisco Estuary. Average turbidity across the Sacramento–San Joaquin Delta (hereafter referred to as “the Delta”) is dependent on annual hydrology. In dry years, the region around Cache Slough (known regionally as the “Cache Slough Complex”) in the northern Delta is generally more turbid than Suisun Bay and the lower Sacramento River. When the Yolo By-Pass (known regionally as “Yolo Bypass”), a large flood bypass that runs parallel to the Sacramento River in the northern Delta, is not flooding and river flows are lower, sediment is usually transported into the Cache Slough Complex because flood tides dominate ebb tides, resulting in transport of suspended sediment from seaward areas of the upper estuary into the Cache Slough Complex. These hydrodynamic conditions also favor the formation of turbidity maximums (TMs) in the Cache Slough Complex. The TMs are areas of higher suspended-sediment concentration, providing higher-turbidity habitat favored by some fishes, including delta smelt, and they can also concentrate other constituents, including phytoplankton and organic carbon that can be important in food webs. Pelagic primary production by phytoplankton is the basis for Delta food webs supporting pelagic fishes such as delta smelt; however, phytoplankton abundance in the Delta has declined during recent decades. We examined how nutrients, hydrodynamics, and other factors affect phytoplankton blooms. Based on our results, we developed three new concepts of phytoplankton bloom formation in the Delta, each associated with a distinct set of hydrologic conditions. First, productivity cascades highlighted how local processes can contribute to phytoplankton blooms observed at the regional scale. Second, we observed phytoplankton blooms in the upper San Francisco Estuary that were associated with transport out of Yolo By-Pass (transport blooms). Third, we also documented a series of phytoplankton blooms that were in the confluence area at the landward edge of Suisun Bay. The conditions leading to creation of confluence phytoplankton blooms are not yet understood, but the confluence region connects the Cache Slough Complex with Suisun Marsh. Therefore, blooms in this area have the potential to spread to large areas of the Delta. At the landscape scale, the distribution of the invasive clams ( Potamocorbula amurensis and Corbicula fluminea , hereafter referred to as “ Corbicula ”) is driven by salinity. At smaller spatial scales, the distribution of either species is sensitive to multiple factors affecting survival and reproduction, complicating efforts to predict distribution and abundance without considering local-scale conditions across the area of interest. In the Cache Slough Complex, the area landward of the exchange zone in regions with LE ratio<1 were characterized by low abundances of Corbicula probably because recruits from seaward areas are not transported past the exchange zone and because there are no landward tributaries with adult Corbicula to provide an upstream source of recruits. Corbicula biomass was highest near or downstream from the exchange zone consistent with Corbicula grazing on phytoplankton produced in the exchange zone or transported from the no-exchange zone. The severity of Corbicula grazing could be reduced by manipulating the hydrodynamic characteristics of waterways; however, the beneficial and harmful effects on the organisms meant to benefit from increased phytoplankton production, including zooplankton and fish species of concern, should be thoroughly examined before manipulating hydrodynamic characteristics. The distribution of fishes at the landscape scale is generally driven by the position of the salinity field in the estuary. The physics to fish project compared distributions of fishes at Ryer Island, a tidal wetland in Suisun Bay and a region of variable salinity, with fish distributions at the Cache Slough Complex, a freshwater region. At Ryer Island, there was an absence of freshwater invasive species and an abundance of native species, such as Sacramento splittail ( Pogonichthys macrolepidotus ), tule perch ( Hysterocarpus traskii ), and Sacramento pikeminnow ( Ptychocheilus grandis ). The native species were almost exclusively captured in wetland and nearshore shallow-water habitat regardless of water-quality conditions. In the Cache Slough Complex, our regional scale objective was to elucidate how hydrodynamic-physical habitat interactions drive fish-community structure. Our studies showed that dendritic channel systems were better able to support native species, while intertidal habitats supported those species best able to exploit the transient character of the habitat. Habitats upstream from the exchange zone were especially important in supporting high numbers of native fishes relative to within or downstream from the exchange zone. Many of the native species were associated with tidal marsh in the no-exchange zone. More pelagic-oriented, mobile species, such as Striped Bass ( Morone saxatilis ), threadfin shad ( Dorosoma petenense ), and Sacramento pikeminnow, were more affected by water-quality conditions, such as turbidity. The physics to fish concept developed in this project provides a framework for designing individual projects and for considering the cumulative effects of multiple projects in a region, using the LE ratio as a guiding metric. The physics to fish concept may also provide a suitable framework for coordinating management actions. Tidal wetlands can function in several ways in the hydrodynamic framework. Relatively small tidal wetlands with short channel networks and with LE ratios>1 are not able to maintain a landward no-exchange zone or an exchange zone. This likely means that any contributions to pelagic food webs would be limited to resources derived from wetland vegetation, which can include dissolved and particulate organic matter (detritus) and populations of consumers that can increase in abundance based on those resources. The fate of the contributed production from these channels depends on the characteristics of the receiving waters seaward of the tidal wetland. If these channels join a large system such as Suisun Bay, then any contribution is likely to be rapidly dispersed in the larger volume; however, the channel junction might provide a focal point for consumers, such as fishes, to congregate and feed on material leaving the wetland on ebb tides before it is dispersed in the larger volume. Fishes might also access these resources by entering the wetland. The physics to fish project has established a foundation and several new concepts for understanding how habitat restoration can benefit native fish populations at the local and regional levels. Many of the ideas regarding habitat restoration and channel modifications outlined in this report could help guide management actions that could improve conditions for native fishes at little or no water cost beyond water already dedicated to other management actions. A complete list of products originating from this work is provided in appendix 1.

California↗

Mineral Commodity Summaries 2010

Each chapter of the 2010 edition of the U.S. Geological Survey (USGS) Mineral Commodity Summaries (MCS) includes information on events, trends, and issues for each mineral commodity as well as discussions and tabular presentations on domestic industry structure, Government programs, tariffs, 5-year salient statistics, and world production and resources. The MCS is the earliest comprehensive source of 2009 mineral production data for the world. More than 90 individual minerals and materials are covered by two-page synopses. For mineral commodities for which there is a Government stockpile, detailed information concerning the stockpile status is included in the two-page synopsis. National reserves information for most mineral commodities found in this report, including those for the United States, are derived from a variety of sources. The ideal source of such information would be comprehensive evaluations that apply the same criteria to deposits in different geographic areas and report the results by country. In the absence of such evaluations, national reserves estimates compiled by countries for selected mineral commodities are a primary source of national reserves information. Lacking national assessment information by governments, sources such as academic articles, company reports, presentations by company representatives, and trade journal articles, or a combination of these, serve as the basis for national reserves information reported in the mineral commodity sections of this publication. A national estimate may be assembled from the following: historically reported reserves information carried for years without alteration because no new information is available; historically reported reserves reduced by the amount of historical production; and company reported reserves. International minerals availability studies conducted by the U.S. Bureau of Mines (USBM), before 1996, and estimates of identified resources by an international collaborative effort (the International Strategic Minerals Inventory) are the basis for some reserves estimates. The USGS collects information about the quantity and quality of mineral resources but does not directly measure reserves, and companies or governments do not directly report reserves to the USGS. Reassessment of reserves is a continuing process, and the intensity of this process differs for mineral commodities, countries, and time period. Throughout the history of Mineral Commodity Summaries and its predecessor prior to 1978, Commodity Data Summaries, the presentation of resource data has evolved. Although world resources have been discussed each year, presentation of reserves and reserve base data varied. From 1957 through 1979, only reserves information was published in the reports, but from 1980 through 1987, only estimates of reserve base, a concept introduced by the U.S. Bureau of Mines (USBM) and the USGS in 1980, were published. Beginning in 1988, both reserves and reserve base information were listed for each mineral commodity where applicable and available. Prior to 1996, the minerals availability studies conducted by the USBM and work with international collaborators were the basis for reserve base data reported in Mineral Commodity Summaries. When the USBM was closed in 1996, this function was discontinued. Since that time, reserve base estimates have been updated to be consistent with changes in reserves, but the nonreserves component of the information upon which the reserve base data were estimated is not current enough to support defensible reserve base estimates. For that reason, publication of reserve base estimates was discontinued for Mineral Commodity Summaries 2010. Abbreviations and units of measure, and definitions of selected terms used in the report, are in Appendix A and Appendix B, respectively. A resource/reserve classification for minerals, based on USGS Circular 831 (published with the U.S. Bureau of Mines) is Appendix C, and a directory of USGS minerals information country specialists and their responsibilities is Appendix D. The USGS continually strives to improve the value of its publications to users. Constructive comments and suggestions by readers of the MCS 2010 are welcomed.

Mineral Commodity Summaries↗

Use case development for earth monitoring, analysis, and prediction (EarthMAP)—A road map for future integrated predictive science at the U.S. Geological Survey

Executive Summary The U.S. Geological Survey (USGS) 21st-century science strategy 2020–30 promotes a bureau-wide strategy to develop and deliver an integrated, predictive science capability that works at the scales and timelines needed to inform societally relevant resource management and protection and public safety and environmental health decisions (U.S. Geological Survey, 2021). This is the overarching goal of the USGS Earth Monitoring, Analysis, and Prediction (EarthMAP) vision, which consists of three components: (1) integrated data and information, (2) integrated predictive science, and (3) actionable information—all designed and delivered to respond to user needs. To launch this vision and help shape the design and implementation of integrated predictive science, the USGS Regional Offices each developed a set of use cases (hereafter Use Cases)—short descriptions of potential science applications that could clearly address high priority decision-making needs of our stakeholders and that align with an integrated science focus. Use Cases are not actionable science planning documents, nor stand-alone scholarly works, but should be considered as innovative, next-generation science ideas that can be considered as potential components of science plans still under development. The goal of Use Case development was to (1) identify and characterize existing USGS scientific capacities and expertise that can support science goals and products, (2) identify opportunities to leverage current capacities for next-generation science, and (3) foster engagement across the entire Bureau to further refine the USGS strategy for EarthMAP and integrated predictive science. The Use Case development effort documented in this report was coordinated by the Use Case Development Team (UCDT), consisting of representatives from each region. The UCDT undertook five tasks: (1) develop a unified approach to engage bureau scientists consistently across all regions in aspirational thinking about what can be accomplished; (2) work with the regions and their Science Centers to generate an initial set of Use Cases, authored directly by scientists; (3) characterize, summarize, and document the initial set of Use Case submissions from authors to illuminate bureau-level demand for integrated science; (4) compare existing and needed capacities from the Use Case descriptions with preliminary results of the EarthMAP Capacity Assessment (Keisman and others, 2021); and (5) describe lessons learned from the Use Case development process and provide recommendations to inform future efforts to generate integrated science activities. This report outlines the approach the UCDT developed to solicit Use Cases from the regions and summarizes the high-level qualitative findings from this first-round effort. The UCDT received 36 Use Cases from the regions and identified potential points of convergence and commonalities considered useful in making connections among the participating scientists. The Southwest (SW) Region and the Rocky Mountain (RM) Region asked scientists to give special consideration to Use Cases with applicability to the Colorado River Basin, and seven of the Use Cases specifically named that geographic area as a focus. Coastal hazards and coastal resilience were identified in Use Cases from the Alaska (AK), Northeast (NE), and Southeast (SE) Regions. Aspects of wildfire and post-wildfire response were part of Uses Cases from AK, RM, and SW Regions. The greatest convergence of Use Case themes was related to conservation of public lands and waters, which is a powerful linkage lending strength to future collaborative efforts. The most common type of stakeholder decisions that would be informed by the Use Case science applications were related to adaptation, mitigation, and response (for example, how to increase the resilience of coastal communities to climate-related stressors and how to prevent or respond to harmful algal blooms). Other common types of decisions included water and land management decisions (including operational water management decisions such as reservoir operations and land use planning in the sagebrush biome), decisions about how to manage and conserve habitats and species, and risk management decisions (such as managing the post-wildfire flood risks). These decision types are not exclusive because many Use Cases cross categories. Use Case authors identified existing and needed science and technology capabilities required for Use Case implementation, which were then aligned to capabilities assessed in the EarthMAP Capacity Assessment (Keisman and others, 2021). Strong alignment was found for data and information integration approaches, modeling and prediction approaches, and capabilities related to delivery of actionable information. A majority of Use Cases indicated insufficient current capacity for needed data collection methods, data integration, and modeling and prediction approaches, whereas only 25 percent indicated insufficient capacity for actionable information delivery. Overall, many Use Case capacity demand gaps could potentially be met by existing bureau-wide capacity. In addition, nearly half of the Use Cases could potentially be implemented within 3 years if funding, capabilities, and personnel impediments were removed and science priorities were realigned. Several challenges emerged during the Use Case development process. The first challenge was developing an approach that was flexible enough to accommodate regional differences in planning and implementation, while also ensuring enough guidance to promote meaningful summary analyses. The UCDT encountered a strong demand for continuous communication and education to improve overall understanding of the integrated predictive science strategy. Another challenge was managing expectations about EarthMAP activities as a design effort that was not aligned to an immediate funding opportunity. Connecting the Use Cases to stakeholder needs without the opportunity for direct stakeholder engagement was also challenging. The last notable challenge was in obtaining consistent interpretation and characterization of the qualitative data housed in the narrative descriptions of Use Cases, written in different styles. Overall, the 36 Use Cases can serve as components of a road map for advancing integrated monitoring and predictive science throughout the USGS by revealing opportunities to (1) encourage cross-region initiatives that address shared interests in common themes by integrating similar Use Cases and through direct involvement of stakeholders in identifying needs and designing effective responses, (2) leverage the Use Cases to target investments that are aligned with the Bureau and Department of the Interior (DOI) priorities, (3) connect Use Cases and the results of the companion EarthMAP Capacity Assessment (Keisman and others, 2021) to identify potential priorities for capacity building investments, and (4) raise awareness of common integrated and interdisciplinary science interests within and across the regions through Use Case and Capacity Assessment summary outreach activities.

Open-File Report↗

Integrated science strategy for assessing and monitoring water availability and migratory birds for terminal lakes across the Great Basin, United States

Executive Summary In 2022, the U.S. Geological Survey (USGS) established the Saline Lake Ecosystems Integrated Water Availability Assessment (IWAAs) to monitor and assess the hydrology of terminal lakes in the Great Basin and the migratory birds and other wildlife dependent on those habitats. Scientists from across the USGS (with specialties in water quantity, water quality, limnology, avian biology, data science, landscape ecology, and science communication) formed the Saline Lake Ecosystems IWAAs Team. The team has developed this regional strategic science plan to guide data collection and assessment activities at terminal lakes in the Great Basin. The U.S. Congress requested the USGS to establish the Saline Lake Ecosystems IWAAs in response to historically low water levels at terminal lakes and associated wetlands across the Great Basin. Not all Great Basin terminal lakes have high salinity; however, all terminal lakes occur in endorheic, closed, basins with no surface-water outflow. Low lake levels across the Great Basin are the result of increased water use for agriculture and municipalities, drought conditions, and a warming climate. Great Basin terminal lake water extents have decreased by as much as 90 percent over the last 150 years, and terminal lake wetlands have decreased in area by as much as 47 percent since 1984. Lake elevations and wetland areas are primarily supported by freshwater inputs from snowmelt feeding upgradient rivers, streams, and springs. These freshwater inputs have been severely reduced because of continued and increased surface-water diversions and surface-water capture through groundwater pumping for agriculture, mining, and public supply as well as unprecedented drought conditions and warming temperatures related to climate change. Water quality, specifically salinity, is highly variable for terminal lakes of the Great Basin, and this variability is a result of the balance between freshwater inflow and evaporation. Variability of salinity at each of the terminal lakes can be affected by lake morphology, hydrogeologic features of the basin, annual variability in weather patterns, and changes in upgradient water use. Hypersaline terminal lakes provide abundant food resources such as brine shrimp and brine flies that support nesting and migrating birds. The density and composition of invertebrates are closely tied to lake salinity. Increased salinity can exceed the tolerance of invertebrates, severely limiting their biomass. In contrast, decreased salinity can lead to altered invertebrate community composition, reducing the abundance of optimal avian prey resources. Great Basin terminal lake ecosystems, including open-water and adjacent aquatic and terrestrial environments, provide resources necessary to sustain many animal populations throughout the year. Although a variety of taxa use terminal lakes, these ecosystems are of acute importance for the millions of migratory waterbirds (for example, shorebirds, wading birds, and waterfowl) dependent on the network of terminal lakes and their associated wetlands. Migratory birds transiting the Pacific and Central Flyways use Great Basin terminal lake ecosystems throughout the year to feed, nest, and transit between wintering and breeding ranges. As such, successful conservation of birds and their habitats requires coordinated management of water and habitats across the Great Basin network of terminal lakes and wetlands. The linkages between water availability and ecosystem vulnerability of terminal lakes in the Great Basin are not well understood. The vulnerability of terminal lakes is related to the factors driving change and adaptive capacity of the lake ecosystem. Saline lake ecosystems are vulnerable when changes in water quantity affect ecosystem function. Water quantity affects salinity, which affects food webs and habitat; these linkages can be investigated with water-quality and food web monitoring. Water quantity also affects inundated habitat, which can be quantified through remote sensing. It is necessary to quantify hydroclimatic and water use controls on water availability to terminal lakes to assess the response of the ecosystems. Remotely sensed data can provide a broad-scale and long-term synoptic view of terminal lake hydrologic characteristics, but ground observations are required to interpret changes in water quality and ecological functions. Some terminal lake basins have ongoing monitoring and modeling efforts within the Great Basin (for example, Great Salt Lake, Carson River Basin), yet most monitoring locations are hydrologically upgradient and too far away from lake inflows to provide an accurate assessment of hydrological trends for the lake ecosystems. Other terminal lakes have no long-term hydrological monitoring in their respective watersheds (for example, Lake Abert). Ecological data collection in the Great Basin is also insufficient to understand how many birds exist on the landscape, how birds use the mosaic of terminal-lake habitats as an interconnected system, and how Great Basin terminal lakes are linked to the larger continental system of the Pacific and Central Flyways. Across agencies and organizations, tracking bird movement, abundance, and diversity is inconsistent, with some lakes having once- or twice-a-year bird survey efforts and a few locations having more intensive ecological data-gathering efforts (for example, Great Salt Lake, Lake Abert). Bridging hydrological and ecological information gaps will improve understanding of the trends in water supply and water quality, habitat availability and usage, and impacts on vulnerable waterbird species, all of which would be used by managers in coordinated conservation of this unique network of terminal-lake habitats. The terminal lakes of the Great Basin are part of the Basin and Range physiographic province that extends from the Colorado Plateau on the east to the Sierra Nevada on the west, and from the Snake River Plain on the north to the Garlock fault and the Mojave block on the south. The Great Basin is larger than 650,000 square kilometers and encompasses most of the State of Nevada but also extends to western Utah, eastern California, southeastern Idaho, southwestern Wyoming, and southeastern Oregon. The climate is arid to semiarid with a hydrologic regime that is snowmelt dominated, providing as much as 75 percent of total annual runoff for the region. Terminal lakes of the Great Basin occupy the lowest areas of closed (endorheic) drainage basins, such that lake levels and water quality respond rapidly to surface-water inflow. Terminal lakes provide local and regional economic value to the States in the Great Basin, including mineral extraction, aquaculture, public works, and recreational uses. As an example, assessments of Great Salt Lake’s ecological health and economic impact find hemispheric importance for the former and regional importance for the latter. Great Salt Lake creates about 7,000 jobs and $2 billion of economic output per year, most of which would be lost with further declines in lake level. The objectives of this Science Strategy are threefold: (1) to identify how changing water availability affects the quality, diversity, and abundance of habitats supporting continental waterbird populations; (2) to highlight the scientific monitoring and assessment needs of Great Basin terminal lakes; and (3) to support coordinated management and conservation actions to benefit those ecosystems, migratory birds, and other wildlife. There are long-term hydrological, ecological, and societal challenges associated with terminal lakes ecosystems in the Great Basin. This Science Strategy benefits partners by providing a conceptual model, nested at different spatial extents, that identifies key scientific information needs to inform coordinated implementation of management and conservation plans within and among hydrologic basins to address these complex challenges.

California, Idaho, Nevada, Oregon, Utah, Wyoming↗

Summary of results of an investigation to define the geohydrology and simulate the effects of large ground-water withdrawals on the Mississippi River alluvial aquifer in northwestern Mississippi

The 7,000 square-mile Mississippi River alluvial plain in north-western Mississippi (the Delta) is underlain by the prolific Mississippi River alluvial aquifer that currently (1983) yields about 1,100 Mgal/d of water to irrigation wells. Commonly, about 20 feet of clay underlying the Delta land surface is underlain by about 80 to 180 feet of sand and gravel that forms the aquifer. The Mississippi River is in good hydraulic connection with the alluvial aquifer. Generally smaller streams are less likely to have good hydraulic connection with the aquifer. Direct vertical recharge to the alluvial aquifer is small. A two-dimensional finite-difference computer model of the alluvial aquifer was constructed, calibrated, and verified using water levels observed for five dates within the period April 1981 to September 1983. The model shows that the aquifer had a net loss in storage of about 360 Mgal/d for the 2-year period April 1981 to April 1983, when pumpage was about 1,100 Mgal/d. The net inflows from the sources of recharge were: Mississippi River, 390 Mgal/d; recharge along east edge of the Delta, 170 Mgal/d; streams within the Delta, 81 Mgal/d; and areal recharge from infiltration, 180 Mgal/d. The effects of several levels of pumpage by wells were projected 20 years into the future. In 2003, the result of continued pumpage at the 1,100 Mgal/d pumping rate would be lowered ground-water levels of more than 20 feet in a large area in the central part of the Delta, and ground-water levels would continue to decline. (USGS)

Water-Resources Investigations Report↗

Estimated use of water in the Apalachicola-Chattahoochee-Flint River basin during 1990, with state summaries from 1970 to 1990

The Apalachicola-Chattahoochee-Flint River basin covers approximately 19,800 square miles in parts of Alabama, Florida, and Georgia. Most of the basin lies within Georgia as does most of the population. Most of the water withdrawn in the basin in 1990 was withdrawn in Georgia (82 percent). Withdrawals in Florida and Alabama each accounted for 9 percent of the total withdrawal in the basin. Water with- drawn in the basin for 1990 totaled 2,098 million gallons per day, of which approximately 17 percent (351 million gallons per day) was consumed. Of the total water used, nearly 86 percent was withdrawn from surface-water sources, and the remaining 14 percent was withdrawn from ground-water sources. Nearly 63 percent of the surface water used in the basin during 1990 was for thermoelectric power generation; other surface water uses included public supply (24 percent), self-supplied commercial- industrial use (12 percent), and agricultural use (4 percent). Nearly 58 percent of the ground water used in the basin for 1990 was used for agricultural irrigation; other ground-water uses included public supply (21 percent), self-supplied domestic use (11 percent), self-supplied commercial-industrial use (9 percent), and thermoelectric power generation (less than 1 percent). The Chattahoochee River supplied most of the surface water used in the basin (64 percent) and the Floridan aquifer system supplied most of the ground water used (44 percent) in 1990. During 1990, 39,815 Mgal/d of water was used to produce 35,843 gigawatthours of electricity. Of that total, 1.076 Mgal/d was used to produced 33,460 gigawwatthours of electricity at 8 fossil fuel facilities and 38,740 Mgal/d was used to produce 2,384 gigawatthours of electricity at 14 hydroelectric facilities.

Alabama, Florida, Georgia↗

Methods for estimating monthly mean concentrations of selected water-quality constituents for stream sites in the Red River of the North basin, North Dakota and Minnesota

Future development of the Garrison Diversion Unit may divert water from the Missouri River into the Sheyenne River and the Red River of the North for municipal and industrial use. The U.S. Bureau of Reclamation's Canals, Rivers, and Reservoirs Salinity Accounting Procedures model can be used to predict the effect various operating plans could have on water quality in the Sheyenne River and the Red River of the North. The model uses, as Input, monthly means of streamflow and selected water-quality constituents for a 54-year period at 28 nodes on the Sheyenne River and the Red River of the North. This report provides methods for estimating monthly mean concentrations of selected water-quality constituents that can be used for input to and calibration of the salinity model. Mater-quality data for 32 gaging stations can be used to define selected water-quality characteristics at the 28 model nodes. Materquality data were retrieved from the U.S. Geological Survey's National Mater Data Storage and Retrieval System data base and statistical summaries were prepared. The frequency of water-quality data collection at the gaging stations is inadequate to define monthly mean concentrations of the individual water-quality constituents for all months for the 54-year period; therefore, methods for estimating monthly mean concentrations were developed. Relations between selected water-quality constituents [dissolved solids, hardness (as CaCO 3 ), sodium, sulfate, and chloride] and streamflow were developed as the primary method to estimate monthly mean concentrations. Relations between specific conductance and streamflow and relations between selected water-quality constituents [dissolved solids, hardness (as CaCO 3 ), sodium, sulfate, and chloride] and specific conductance were developed so that a cascaded-regression relation could be developed as a second method of estimating monthly mean concentrations and, thus, utilize a large specific-conductance data base. Information about the quantity and the quality of ground water discharging to the Sheyenne River is needed for model input for reaches of the river where ground water accounts for a substantial part of streamflow during periods of low flow. Ground-water discharge was identified for two reaches of the Sheyenne River. Ground-water discharge to the Sheyenne River in the vicinity of Warwick, N.Dak., was about 14.8 cubic feet per second and the estimated dissolved-solids concentration was about 441 milligrams per liter during October 15 and 16, 1986. Ground-water discharge to the Sheyenne River in a reach between Lisbon and Kindred, N.Dak., ranged from an average of 25.3 cubic feet per second during September 13 to November 19, 1963, to about 45.0 cubic feet per second during October 21 and 22, 1986. Dissolved-solids concentration was estimated at about 442 milligrams per liter during October 21 and 22, 1986.

Water-Resources Investigations Report↗

Survey of chemical contaminants in the Hanalei River, Kaua'i, Hawai'i, 2001

The Hanalei River on the island of Kaua'i in Hawai'i was designated an American Heritage River in 1998, providing special attention to natural resource protection, economic revitalization, and historic and cultural preservation. Agricultural, urban, and tourism-related activities are potential sources of contamination within the Hanalei River watershed. The objective of this study was to measure certain persistent organic chemicals and elements in the Hanalei River. During a relatively low-flow period in December of 2001, samples of native Akupa sleeper fish ( Eleotris sandwicensis ), freshwater Asian clam ( Corbicula fluminea ), giant mud crab ( Scylla serrata ), surface water, and stream bed sediment were collected from a lower estuarine reach of the river near its mouth at Hanalei Bay and from an upper reach at the Hanalei National Wildlife Refuge. Samples were analyzed for residues of urban and agricultural chemicals including organochlorine pesticides, polychlorinated biphenyls, polycyclic aromatic hydrocarbons, and elements (including mercury, lead, cadmium, arsenic, and selenium). Organic contaminants were extracted from the samples with solvent, enriched, and then analyzed by gas chromatographic analysis with electron capture or mass spectrometric detection. Samples were acid-digested for semi-quantitative analysis for elements by inductively-coupled plasma-mass spectrometry and for quantitative analysis by atomic absorption spectrophotometry. Concentrations of organochlorine pesticides, polycyclic aromatic hydrocarbons, and polychlorinated biphenyls in biota, surface water, and bed sediment sampled from the Hanalei River ranged from nondetectable to very low levels. Polychlorinated biphenyls were below detection in all samples. Dieldrin, the only compound detected in the water samples, was present at very low concentrations of 1-2 nanograms per liter. Akupa sleeper fish and giant mud crabs from the lower reach ranged from 1 to 5 nanograms per gram (wet weight) dieldrin and from less than 0.3 to 2.1 nanograms per gram total chlordane. Concentrations of individual polycyclic aromatic hydrocarbons in the lower reach bed sediments ranged from less than 1 to 190 nanograms per gram (dry weight). Relative concentrations (patterns) of the polycyclic aromatic hydrocarbons in one portion of a sediment sample indicated combustion sources. Concentrations of elements in the surface water, biota, and sediment samples were below toxicity thresholds of ecological concern. In summary, concentrations of the organic contaminants and elements targeted by this study of the Hanalei River in 2001 were below U.S. Environmental Protection Agency probable adverse effects levels for aquatic organisms.

Scientific Investigations Report↗

Statistical summary of selected physical, chemical, and microbial characteristics, and estimates of constituent loads in urban stormwater, Maricopa County, Arizona

Stormwater and streamflow in the Phoenix, Arizona, area were monitored to determine the physical, chemical, and microbial characteristics of storm- water from areas having different land uses; to describe the characteristics of streamflow in a river that receives urban stormwater; and to estimate constituent loads in stormwater from unmonitored areas in Maricopa County, Arizona. Land use affects urban stormwater chemistry mostly because the percentage of impervious area controls the suspended-solids concentrations and varies with the type of land use. Urban activities also seem to concentrate cadmium, lead, and zinc in sediments. Urban stormwater had larger concentrations of chemical oxygen demand and biological oxygen demand, oil and grease, and higher counts of fecal bacteria than streamflow and could degrade the quality of the Salt River. Most regression equations for estimating constituent loads require three explanatory variables (total rainfall, drainage area, and per- centage of impervious area) and had standard errors that were from 65 to 266 percent. Localized areas that appear to contribute a large proportion of the constituent loads typically have 40 percent or more impervious area and are associated with industrial, commercial, and high-density residential land uses. The use of the mean value of the event-mean constituent concentrations measured in stormwater may be the best way of estimating constituent concentrations.

Arizona↗

Sediment yields in eastern Montana; summary of data and proposed techniques for estimating sediment yields from small, ungaged watersheds

Sediment-yield data for 121 sites in eastern Montana have been compiled from results of studies conducted by various Federal, State, and private agencies. Methods used to determine mean annual sediment yields included reservoir sedimentation surveys, suspended-sediment sampling in streams, and estimates of gross erosion and indirect estimation based on physical characteristics of the basin. Multiple-regression equations were developed and evaluated for their adequacy in estimating mean annual sediment yields from small, ungaged watersheds in eastern Montana. Sediment yields determined from reservoir surveys were used as the dependent variable because they were considered the most representative of long-term yields. Independent variables consisted of basin characteristics which could be measured from maps or obtained from published sources. Consequently, equations developed in this study do not require onsite data. Evaluation of equations indicated that the best prediction capability was obtained when reservoir basins were segregated into classes of similar vegetation/soil complex. The predictive capability of regression equations developed for each of three classes of vegetation/soil complex, as indicated by the coefficient of determination (R2), ranged from 0.59 to 0.96. Corresponding standard errors ranged from 95 to 20 percent. The equations are applicable for small drainage basins of 2 square miles or less within the study area. (USGS)

Montana↗

Water quality in Reedy Fork and Buffalo Creek basins in the Greensboro area, North Carolina, 1986-87

Water and bottom-sediment samples were collected from April 1986 through September 1987 at 19 sites in Guilford County and the City of Greensboro, North Carolina. Sampling locations included 13 stream sites, two lakes that supply the City of Greensboro with drinking water, two City of Greensboro finished drinking-water filtration plants, and effluent from the two municipal wastewater plants prior to outfall into receiving streams. Water sampling consisted of six surveys during various stages of steady ground-water flow at all sites and high-flow-event sampling during two storms at six sites. Bottom-sediment samples were collected at three sites during two routine sampling surveys. A summary of nearly 22, 000 separate chemical or physical analyses of water samples or bottom sediment is presented and discussed as individual values, ranges of values, or median values with respect to the locations of sampling sites, streamflow conditions, or other information bearing on water-quality conditions under discussion. The results include discussions of general water-quality indicators; major ion, nutrient, and trace-element concentrations; acid and base/neutral extractable organic compounds; volatile organic compounds; and organochlorine and organophosphorus pesticides detected at each sampling site. Loadings of selected constituents are also estimated on a yearly and daily basis. The quality of the raw and finished water, municipal effluents, and streams in the Greensboro area are characterized by using State and Federal water-quality standards. Inorganic constituents most commonly found in excess of standards were iron, copper, zinc, arsenic, phosphorus, manganese, cyanide, and mercury. Relatively few organic compounds were detected; however, those consistently reported were phthalate, thihalomethane, organophosphorus pesticide, benzol, and phenolic compounds. Selected inorganic, physical, and total organic carbon data are used in a Wilcoxon test for two independent variables to statistically compare water-quality characteristics in selected rural, semideveloped and urban basins. During low-flow sampling, the constituents that differed significantly among all sites were calcium, magnesium, and chloride. During low flows, concentrations of orthophosphate, fluoride, sulfate, and TOC differed at the urban site from the rural and semideveloped and urban sites. There were no significant differences among sites in concentrations of sodium, suspended sediment, nickel, zinc, copper, and mercury during low flows. The Wilcoxon test performed on high-flow data indicated that concentrations of TOC, chloride, sulfate, suspended sediment, and nickel were not significantly different among the sites.

North Carolina↗

Development of a groundwater-simulation model in the Los Angeles Coastal Plain, Los Angeles County, California

Executive Summary The Los Angeles Coastal Plain (LACP) covers about 580 square miles and is the largest coastal plain of semiarid southern California. The LACP is heavily developed with mostly residential, commercial, and industrial land uses that rely heavily on groundwater for water supply. In 2010, the LACP was home to about 14 percent of California’s population, or about 5.4 million residents. The LACP is also a major commercial and industrial hub with industries including manufacturing, aerospace, entertainment, and tourism. There has been a heavy reliance on groundwater from the LACP for many years. An average of 305,000 acre-feet per year (acre-ft/yr) of groundwater was used annually from the LACP from 1971 to 2015. The need to replenish the groundwater basins within the LACP was recognized as far back as the 1930s, when spreading grounds were first used to replenish groundwater basins and store water underground during times of water surplus to meet demands in times of shortage. Seawater intrusion resulting from freshwater pumping was first observed in the 1940s. As a result, injection of imported water through wells at what is now the West Coast Basin Barrier Project began on an experimental basis in 1951. Managed aquifer recharge from the spreading grounds and barrier wells is now a substantial component of the LACP’s groundwater supply. The average annual recharge from water spreading from 1971 to 2015 was about 120,000 acre-ft/yr, and the average annual injection into the barrier wells was about 33,000 acre-ft/yr. Other inflows include areal recharge, underflow from San Gabriel and San Fernando Valleys, and onshore flow from the ocean. The average annual recharge from these sources was 100,000 acre-feet (acre-ft) from 1971 to 2015. Additionally, cross-boundary flow from Orange County into the western Orange County subareas of the LACP was simulated as 48,000 acre-ft from 1971 to 2015. This study, conducted in cooperation with the Water Replenishment District of Southern California (WRD), involved an assessment of the historical and present status of groundwater resources in the LACP and the development of tools to better understand the groundwater system. These efforts were built upon results from previous studies and incorporate new information and developments in modeling capabilities to provide a more detailed analysis of the aquifer systems. This study includes a comprehensive compilation of geologic and hydrologic data (Chapter A), development of a chronostratigraphic model that provides a detailed description of the LACP aquifer systems (Chapter B), characterization of the groundwater hydrology of the LACP, including a down-hole analysis of grain size using lithologic and geophysical logs (Chapter C), and development and application of the Los Angeles Coastal Plain Groundwater-flow Model (LACPGM) to simulate past groundwater conditions, estimate groundwater-budget components and flow paths, and approximate future groundwater conditions under different scenarios (Chapter D).

California↗

Water resources in the Big Lost River Basin, south-central Idaho

The Big Lost River basin occupies about 1,400 square miles in south-central Idaho and drains to the Snake River Plain. The economy in the area is based on irrigation agriculture and stockraising. The basin is underlain by a diverse-assemblage of rocks which range, in age from Precambrian to Holocene. The assemblage is divided into five groups on the basis of their hydrologic characteristics. Carbonate rocks, noncarbonate rocks, cemented alluvial deposits, unconsolidated alluvial deposits, and basalt. The principal aquifer is unconsolidated alluvial fill that is several thousand feet thick in the main valley. The carbonate rocks are the major bedrock aquifer. They absorb a significant amount of precipitation and, in places, are very permeable as evidenced by large springs discharging from or near exposures of carbonate rocks. Only the alluvium, carbonate rock and locally the basalt yield significant amounts of water. A total of about 67,000 acres is irrigated with water diverted from the Big Lost River. The annual flow of the river is highly variable and water-supply deficiencies are common. About 1 out of every 2 years is considered a drought year. In the period 1955-68, about 175 irrigation wells were drilled to provide a supplemental water supply to land irrigated from the canal system and to irrigate an additional 8,500 acres of new land. Average. annual precipitation ranged from 8 inches on the valley floor to about 50 inches at some higher elevations during the base period 1944-68. The estimated water yield of the Big Lost River basin averaged 650 cfs (cubic feet per second) for the base period. Of this amount, 150 cfs was transpired by crops, 75 cfs left the basin as streamflow, and 425 cfs left as ground-water flow. A map of precipitation and estimated values of evapotranspiration were used to construct a water-yield map. A distinctive feature of the Big Lost River basin, is the large interchange of water from surface streams into the ground and from the ground into the surface streams. Large quantities of water disappear in the Chilly, Darlington, and other sinks and reappear above Mackay Narrows, above Moore Canal heading, and in other reaches. A cumulative summary of water yield upstream from selected points in the basin is as follows : Above Howell Ranch: water yield: 345 cfs; surface water: 310 cfs; ground water: 35 cfs Above. Mackay Narrows water yield: 450 cfs; surface water: 325 cfs; ground water: 75 cfs; crop evapotranspiration: 50 cfs Above Arco: water yield: 650 cfs; surface water: 75 cfs; ground water: 425 cfs; crop evapotranspiration: 150 cfs Ground-water pumping affects streamflow in reaches , where the stream and water table are continuous, but the effects of pumping were not measured except locally. Pumping depletes the total water supply by the. amount of the pumped water that is evapotranspired by crops. The part of the pumped water that is not consumed percolates into the ground or runs off over the land surface to the stream. The estimated 425 cfs that leaves the basin as ground-water flow is more than adequate for present and foreseeable needs. However because much of the outflow occurs at considerable depth, the quantity that is salvageable is unknown. Both the surface and ground waters are of good quality and are suitable for most uses. Although these waters are low in total dissolved solids, they tend to be hard or very hard.

Idaho↗

Statistical summary and evaluation of the quality of surface water in the Colorado River basin, 1973-82 water years

Significant upward trends in dissolved-solids concentrations were detected with the Seasonal Kendall Test for trends at three stations in the upper basin during the study period. The increases exceeded 270 milligrams per liter per year at two stations and 165 milligrams per liter per year at the third station. The composition of dissolved constituents in the Colorado River basin changes from predominantly sodium and chloride ions in the upper basin to predominantly calcium and bicarbonate ions in the lower basin. The U.S. Environmental Protection Agency secondary drinking-water regulations of 500 milligrams per liter for total dissolved solids was exceeded 95 percent of the time at each station on the main stem of the Colorado River in the upper basin. In the middle Colorado River basin, the Environmental Protection Agency secondary drinking-water regulations for total dissolved solids was exceeded approximately 95 percent of the time at most stations. Nutrient concentrations in the Colorado River basin generally were low. Only one sample exceeded the level set for nitrate nitrogen, and no other nutrient species exceeded Environmental Protection Agency levels. A general upward trend was detected in organic nitrogen and total nitrogen, but concentrations still remained low. Densities of fecal-col iform and fecal-streptococcal bacteria ranged from less than 1 colony per 100 milliliters to 26,000 colonies per 100 milliliters and 1 colony per 100 milliliters to 50,000 colonies per 100 milliliters, respectively. Fecal-coliform densities exceeded Environmental Protection Agency criteria for public water supply (2,000 colonies per 100 milliliters) at several stations during the study. Biochemical oxygen demand concentrations ranged from 0.00 to 34 milligrams per liter. Only one mean biochemical oxygen demand concentration exceeded 8 milligrams per liter, the upper range of concentration common in moderately contaminated streams. Trace elements and pesticides were detected in many samples throughout the basin. The concentrations generally were low, and maximum contaminant levels rarely were exceeded.

Texas↗

Summary statistics and trend analysis of water-quality data at sites in the Gila River basin, New Mexico and Arizona

Summary statistics and temporal trends for 19 water-chemistry constituents and for turbidity were computed for 13 study sites in the Gila River basin, Arizona and New Mexico. A nonparametric technique, the seasonal Kendall tau test for flow-adjusted data, was used to analyze temporal changes in water-chemistry data. For the 19 selected constituents and turbidity, decreasing trends in concentrations outnumbered increasing trends by more than two to one. Decreasing trends in concentrations of constituents were found for 49 data sets at the 13 study sites. Gila River at Calva and Gila River above diversions, at Gillespie Dam (eight each) had the most decreasing trends for individual sites. The largest number of decreasing trends measured for a constituent was six for dissolved lead. The next largest number of decreasing trends for a constituent was for dissolved solids and total manganese (five each). Hardness, dissolved sodium, and dissolved chloride had decreasing trends at four of the study sites. Increasing trends in concen- trations of constituents were found for 24 data sets at the 13 study sites. The largest number of increasing trends measured for a single constituent was for pH (four), dissolved sulfate (three), dissolved chromium (three) and total manganese (three). Increased concentrations of constituents generally were found in three areas in the basin-at Pinal Creek above Inspiration Dam, at sites above reservoirs, and at sites on the main stem of the Gila River from Gillespie Dam to the mouth.

Water-Resources Investigations Report↗

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗

Water levels in the Calumet aquifer and their relation to surface-water levels in northern Lake County, Indiana, 1985-92

The U.S. Geological Survey made 2,328 water-level measurements at a total of 96 ground-water and surface-water sites in northern Lake County, Indiana, from August 1985 through September 1992. This report lists and summarizes the significance of the measurements. Northern Lake County is on the southern shore of Lake Michigan and includes the cities of East Chicago, Gary, Hammond, and Whiting. The study area is underlain by the unconfined Calumet aquifer and receives about 36 inches of precipitation per year. The U.S. Geological Survey investigated ground-water levels and flow in the Calumet aquifer and the effect of Lake Michigan levels on ground-water and surface-water levels throughout the study area. Summary statistics of the water-level data were computed for each site. Ground-water levels annually reach a maximum in June or July and a minimum in September or October. Measured groundwater fluctuations in the Calumet aquifer during the study period ranged from 0.40 to 5.01 feet, and the mean ground-water fluctuation was about 2.3 feet The largest surface-water fluctuations were affected by record setting Lake Michigan levels. Midmonth daily averages for the data-collection period show that Lake Michigan fluctuated 4.14 feet Water-level fluctuations on the Grand Calumet River were from 1.06 to 2.45 feet. Analysis of water-level data indicates that the 1988 drought did not substantially affect water levels in the Calumet aquifer, but the deficit in precipitation reversed vertical flow gradients in ground water at three paired deep and shallow wells. High water levels in Lake Michigan during 1985-87 created long-term backwater effects on the Grand Calumet River as far as 11.0 miles upstream from Lake Michigan. Analysis of water-level data from the data-collection network indicates that the water table normally slopes toward streams, ditches, sewers, the Indiana Harbor Canal, and Lake Michigan. The slope of the water table toward the Grand Calumet River is greatest in the winter and can decrease to being almost horizontal in the summer. Wells near streams respond quickly to nearby surface-water-level changes. Water-table maps indicate that sewers and dewatering systems are lowering ground-water levels in large areas. Ditches, the Grand Calumet River, and the Indiana Harbor Canal connect the Lake Michigan water level to large parts of the study area. The surface-water stage in the Indiana Harbor Canal, which functions as a ditch, can equal Lake Michigan's stage up to 3.75 miles inland from the lakeshore. Human activity, the stage of Lake Michigan, and the storage capacity of the Calumet aquifer combine to reduce vertical changes in the water table in the study area.

Indiana↗

Vascular Plant and Vertebrate Inventory of Gila Cliff Dwellings National Monument

Executive Summary This report summarizes the results of the first comprehensive biological inventory of Gila Cliff Dwellings National Monument (NM) in western New Mexico. This project was part of a larger effort to inventory plants and vertebrates in eight National Park Service units in Arizona and New Mexico. Our surveys address many of the objectives that were set forth in the monument's natural resource management plan almost 20 years ago, but until this effort, those goals were never accomplished. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Gila Cliff Dwellings NM to document presence of species within the boundaries of the monument. For all taxonomic groups that we studied, we collected 'incidental' sightings on U.S. Forest Service lands adjacent to the monument, and in a few cases we did formal surveys on those lands. Because we used repeatable study designs and standardized field techniques, these inventories can serve as the first step in a biological monitoring program for Gila Cliff Dwellings NM and surrounding lands. We recorded 552 species at Gila Cliff Dwellings NM and the surrounding lands (Table 1). We found no non-native species of reptiles, birds, or mammals, one non-native amphibian (American bullfrog), and 33 non-native plants. Particularly on lands adjacent to the monument we found that the American bullfrog was very abundant, which is a cause for significant management concern. Species of non-native plants that are of management concern include red brome, bufflegrass, and cheatgrass. For a park unit of its size and geographic location, we found the plant and vertebrate communities to be fairly diverse; for each taxonomic group we found representative species from a wide range of taxonomic orders and/or families. The monument's geographic location, with influences from the Rocky Mountain, Chihuahuan Desert, and Madrean ecological provinces, plays an important role in determining the species richness at the monument. Also important is the wide range of conditions at the site. The diversity of plants results from a wide variety of soil types and aspects (from the cool, moist Cliff Dweller Canyon to dry mesa slopes) and an abundance of water from the West Fork of the Gila River. In turn, the vertebrate communities respond to this diversity of vegetation, topography, and microsites. For example, for each taxonomic group we found species that were only associated with a single community type, most often the riparian areas along the West and Middle forks of the Gila River. We found cause for significant concern with regard to loss of species in the last few decades. One species of amphibian (Chiricahua leopard frog) is certainly extirpated from the area. Three other species of amphibians (Mexican spadefoot, Woodhouse's toad, and red-spotted toad), reported as being 'common' in the area in 1971, were not found during our surveys. In addition, we did not find three species of rodents that were found in 1965: silky pocket mouse, Ord's kangaroo rat, and southern grasshopper mouse. The monument's aquatic vertebrate component, in particular, may be at a critical juncture whereby other species, such as gartersnakes, may be poised for extirpation. Declining abundance of native fish species has been demonstrated from long-term monitoring of these communities along the Middle Fork of the Gila River. This report includes lists of species recorded by us or species likely to be recorded with additional survey effort. It also includes management implications from our work - how the monument staff might better maintain or enhance the unique biological resources of the monument. This study is the first step in a long-term process of compiling information on the biological resources of the monument and its surrounding areas. We recommend additional inventory and monitoring studies and identify components of our effort that could be improved upon

Open-File Report↗