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At least 793 records · Page 44Linked to original sources
USGS2024

Morbidity in California giant salamander (Dicamptodon ensatus Eschscholtz, 1833) caused by Euryhelmis sp. Poche, 1926 (Trematoda: Heterophyiidae)

In the fall of 2021, California Department of Fish and Wildlife reported larval and adult California giant salamanders ( Dicamptodon ensatus Eschscholtz, 1833) with skin lesions at multiple creeks in Santa Clara and Santa Cruz Counties, California, USA. Field signs in both stages included rough, lumpy textured skin, and larvae with tails that were disproportionately long, flat, wavy, and flaccid. Presence of large-bodied larvae suggested delayed metamorphosis, with some larvae having cloudy eyes and suspected blindness. To determine the cause of the disease, three first-of-the-year salamanders from one location were collected, euthanized with 20% benzocaine, and submitted for necropsy to the U.S. Geological Survey, National Wildlife Health Center. Upon gross examination, all salamanders were emaciated with no internal fat stores, and had multiple pinpoint to 1.5-mm diameter raised nodules in the skin over the body, including the head, gills, dorsum, ventrum, all four limbs, and the tail; one also had nodules in the oral cavity and tongue. Histologically all salamanders had multiple encysted metacercariae in the dermis, subcutis, and skeletal muscles of the head, body, and tail that were often associated with granulomatous and granulocytic inflammation and edema. A small number of encysted meta cercariae or empty cysts were present in the gills with minimal inflammation, and rarely in the kidney with no associated inflammation. Morphology of live metacercariae (Trematoda: Heterophyiidae), and sequencing of the 28S rRNA gene identified a species of Euryhelmis (Poche, 1926). Artificial digestion of a 1.65 g, decapitated, eviscerated carcass yielded 773 metacercariae, all of similar size and morphology as the live specimens. Based on these findings, the poor body condition of these salamanders was concluded to be due to heavy parasite burden. Environmental factors such as drought, increased temperature, and overcrowded conditions may be exacerbating parasite infections in these populations of salamander.

California↗
USGS1999

Boreal partners in flight: Working together to build a regional research and monitoring program

Boreal regions of western North America regularly support breeding populations of 130 species of landbirds, including 68 Nearctic-Neotropical migrants. Primary conservation concerns within the region include increased timber harvesting, insect outbreaks, fire suppression, mining, impacts of military training activities, urbanization, and recreational activities. Under auspices of Partners in Flight, biologists, land and resource managers, and conservationists from Alaska and western Canada have combined efforts to develop a regional research and monitoring program for landbirds. An experimental monitoring program has been under way during the past four years to test the relative statistical power and cost-effectiveness of various monitoring methods in Alaska. Joint efforts currently include the Alaska Checklist Project on National Wildlife Refuges, 75 Breeding Bird Surveys along the road system, 122 Off-road Point Count routes, 27 Monitoring Avian Productivity and Survivorship banding sites, and 8 migration banding stations. The ultimate goal is to design a comprehensive monitoring program that is sensitive to changes in population size, survival rates, and productivity, but robust enough to accommodate logistical constraints that arise when working in vast, roadless areas with limited funds and staff. Primary challenges that must be faced to assure the long-term future of such a program are obtaining long-term commitment from resource agencies in the region, integrating this program with other national and regional programs that address those species and habitats that are inadequately monitored by established techniques, and developing cooperative research, monitoring, and management programs at the landscape level.

Alaska↗
USGS2005

Testing a West Nile virus vaccine in sandhill cranes (Grus canadensis)

Eight sandhill cranes (Grus canadensis) were vaccinated with a commercial equine West Nile virus vaccine (Fort Dodge Animal Health, Fort Dodge, Iowa, USA) at the USGS Patuxent Wildlife Research Center, Laurel, Maryland, USA. Three doses of the vaccine were given, the first dose (day 0) was followed by a second 21 days later and the third dose 7 days after the second day 28 after the first dose). All doses were 0.50 ml. In addition, 5 sandhill cranes were given injections of similar amounts of sterile water on the same schedule. Blood for complete blood counts, serum chemistries, and serological testing was collected at weekly intervals. Ten weeks after the first injection of the vaccine and 6 weeks after the last of the 3 injections of the vaccine, the cranes were shipped to the USGS National Wildlife Heath Center, Madison, Wisconsin, USA. After a two-week adjustment period, 11 of these cranes were injected intramuscularly with one mosquito dose of West Nile virus. Two of the vaccinated cranes were not challenged and acted as uninfected controls. One week post challenge the only abnormal findings were slight weight loss (average 6% loss since the time of challenge with West Nile virus) and elevated white blood cell counts (heterophilic leukocytosis). There were no deaths and no clinically ill cranes (unvaccinated or vaccinated cranes) among the 11 challenged birds. All cranes were euthanized 6 weeks post challenge, and necropsies were performed. Pre-challenge titers showed no titer response to the vaccinations. However, when challenged, vaccinated cranes developed titers more quickly (within 7-10 days), and were viremic and shed virus via the cloaca for a shorter period of time than the unvaccinated cranes (2-7 days for vaccinated cranes versus 2-10 days for unvaccinated cranes). No remarkable lesions were noted in any of the cranes during the necropsy examinations. Histopathological findings are available for only four of the cranes at this time. Three of those had mild to moderate encephalitis, myelitis, and myocarditis. Initial histopathological findings also indicated a difference in the lesions found in the brains of the vaccinated versus unvaccinated cranes. The fourth crane was a vaccinated unchallenged control that had none of the lesions described. We concluded, based on the findings of no adverse reactions and the higher titers and reduced viremia seen in the cranes, that, indeed, the vaccine is safe for use in cranes and can be effective in reducing the severity of a natural infection. We would recommend this vaccine for use in adult cranes. A companion study is looking at the safety and efficacy of the vaccine for crane chicks as young as 7-10 days of age and that will be reported at a later date.

Book chapter↗
USGS1995

Non-native animals on public lands

Non-native plants and animals have become part of our surroundings, in cities, agricultural areas, and wildlands. While there are many beneficial purposes for non-native animals, such as for food and sport hunting and as agricultural animals, the introduction of some has had major negative economic consequences (Palmer 1899), and adverse effects on native wildlife, plants, and habitats. The British ecologist Charles Elton, in a major review of introduced species, described the increasing number of invasions as constituting "one of the great historical convulsions in the world's flora and fauna" (Elton 1958, p. 31). Non-native species are significant problems on large areas of state and federal public lands, and areas set aside to protect native plant and animal communities are not immune to such harm. Science and conservation journals have devoted entire issues to the threats posed by non-native plants and animals in nature reserves (e.g., Usher et al. 1988). In a compilation of threats to U.S. national parks, non-native plants and animals were the most often reported threat, and were reported by the most areas; feral cats ( Felis catus ), feral dogs ( Canis familiaris ), and wild pigs ( Sus scrofa ) were the non-native animals cited most often (NPCA 1977). Non-native species present serious threats, but at the same time, coordinated efforts on public lands offer the best possibility for controlling some harmful non-native species, and protecting both native plant and animal communities and human interests and needs. We compiled information on non-native animals on public and private land-management areas by conducting a mail survey to assess their occurrence and management status in land-management areas. Survey results represent contributions from 937 national parks, national forests, national wildlife refuges, Bureau of Land Management field areas, and state and private land-management areas. The results reflect those species that land managers considered of greatest concern, and their general distribution on public lands. Non-native invertebrate animals, particularly forest insects and agricultural pests, cause severe economic and environmental damage as well (OTA 1993), but were not the focus of this survey.

Book chapter↗
USGS2019

Distribution of contaminants in the environment and wildlife habitat use: A case study with lead and waterfowl on the Upper Texas Coast

The magnitude and distribution of lead contamination remain unknown in wetland systems. Anthropogenic deposition of lead may be contributing to negative population-level effects in waterfowl and other organisms that depend on dynamic wetland habitats, particularly if they are unable to detect and differentiate levels of environmental contamination by lead. Detection of lead and behavioral response to elevated lead levels by waterfowl is poorly understood, but necessary to characterize the risk of lead-contaminated habitats. We measured the relationship between lead contamination of wetland soils and habitat use by mottled ducks ( Anas fulvigula ) on the Upper Texas Coast, USA. Mottled ducks have historically experienced disproportionate negative effects from lead exposure, and exhibit a unique nonmigratory life history that increases risk of exposure when inhabiting contaminated areas. We used spatial interpolation to estimate lead in wetland soils of the Texas Chenier Plain National Wildlife Refuge Complex. Soil lead levels varied across the refuge complex (0.01–1085.51 ppm), but greater lead concentrations frequently corresponded to areas with high densities of transmittered mottled ducks. We used soil lead concentration data and MaxENT species distribution models to quantify relationships among various habitat factors and locations of mottled ducks. Use of habitats with greater lead concentration increased during years of a major disturbance. Because mottled ducks use habitats with high concentrations of lead during periods of stress, have greater risk of exposure following major disturbance to the coastal marsh system, and no innate mechanism for avoiding the threat of lead exposure, we suggest the potential presence of an ecological trap of quality habitat that warrants further quantification at a population scale for mottled ducks.

Texas↗
USGS2009

Threatened fishes of the world: Moapa coriacea Hubbs and Miller, 1948 (cyprinidae)

Moapa dace. Conservation status : Endangered (U.S. Department of the Interior 1967 ), Critically Endangered, IUCN (Gimenez 1996 ). Identification : Small embedded scales, narrow caudal peduncle and a bright black spot at the base of deeply forked tail. Pharyngeal teeth (0,5–4,0) hooked but with a grinding surface. Adults 50 to 120 mm total length. Drawing adapted from La Rivers ( 1962 ). Distribution : Endemic to the upper Muddy River system, Clark County, Nevada where the river originates from over 20 thermal springs. Prior to 1995 Moapa dace occupied 9.5 stream km including the upper Muddy River and spring-fed tributaries (U.S. Fish and Wildlife Service 1995 ). Distribution has contracted to 2 km (unpublished data) since the 1995 invasion of blue tilapia, Oreochromis aurea . Abundance : In 1994 the population was about 3,800, but after tilapia invasion dropped below 1,600 (Scoppettone et al. 1998 ) where it has remained (unpublished data). Habitat and ecology : Omnivorous but tends toward carnivory. Feed primarily on drift in areas adjacent to fast water 26–32°C. Reproduction : Occurs year round in spring-fed tributaries to the Muddy River in water temperature of 30–32°C (Scoppettone et al. 1992 ). Threats : Nonnative species (Scoppettone 1993 ; Scoppettone et al. 1998 ) and ground-water pumping (Mayer and Congdon 2008 ). Conservation actions : Moapa Valley National Wildlife Refuge was established in the upper Muddy River for the protection and perpetuation of Moapa dace. Barrier installation and chemical removal of blue tilapia downstream of refuge habitat provides 2 km of stream without tilapia. Conservation recommendations : Eliminate tilapia from the Muddy River system and control or eliminate other nonnative species. Protect spring discharge from excessive water withdrawal. Remarks : Given a high priority for recovery by the U.S. Government.

Environmental Biology of Fishes↗
USGS1995

Increased avian diseases with habitat change

Changes in disease patterns and trends reflect changing relationships between the affected species (host) and the causes of disease (agent). Host-agent interactions are closely linked to environmental factors that either enhance or reduce the potential for disease to occur. As a result, wildlife disease patterns and trends are, to a substantial extent, indicators of environmental quality and changing host-agent interactions within the environment being evaluated. The types, distribution, and frequency of diseases causing major avian die-offs have changed greatly during the 20th century. Too little is known to assess the changes of most avian diseases that result in chronic attrition rather than major die-offs, or about those that affect reproductive success, reduce body condition, or affect survival in other indirect ways. Nevertheless, the changing patterns and trends in highly visible avian diseases provide notice of problems needing attention. Information on the status of disease in wild birds was obtained from National Wildlife Health Center (NWHC) evaluations of the cause of death for more than 30,000 carcasses from across the United States during the past two decades, reports of avian mortality received from collaborators, the scientific literature, and NWHC field investigations of bird mortality. Comprehensive assessments of causes of wild bird mortality, magnitude of losses, and geographic distribution of specific diseases are not possible from these data, although we can identify general relationships for waterfowl and some other species.

Book chapter↗
USGS2011

Monitoring a boreal wildfire using multi-temporal Radarsat-1 intensity and coherence images

Twenty-five C-band Radarsat-1 synthetic aperture radar (SAR) images acquired from the summer of 2002 to the summer of 2005 are used to map a 2003 boreal wildfire (B346) in the Yukon Flats National Wildlife Refuge, Alaska under conditions of near-persistent cloud cover. Our analysis is primarily based on the 15 SAR scenes acquired during arctic growing seasons. The Radarsat-1 intensity data are used to map the onset and progression of the fire, and interferometric coherence images are used to qualify burn severity and monitor post-fire recovery. We base our analysis of the fire on three test sites, two from within the fire and one unburned site. The B346 fire increased backscattered intensity values for the two burn study sites by approximately 5–6 dB and substantially reduced coherence from background levels of approximately 0.8 in unburned background forested areas to approximately 0.2 in the burned area. Using ancillary vegetation information from the National Land Cover Database (NLCD) and information on burn severity from Normalized Burn Ratio (NBR) data, we conclude that burn site 2 was more severely burned than burn site 1 and that C-band interferometric coherence data are useful for mapping landscape changes due to fire. Differences in burn severity and topography are determined to be the likely reasons for the observed differences in post-fire intensity and coherence trends between burn sites.

Geomatics, Natural Hazards and Risk↗
USGS2005

Coral disease and health workshop: Coral histopathology II, July 12-14, 2005

The health and continued existence of coral reef ecosystems are threatened by an increasing array of environmental and anthropogenic impacts. Coral disease is one of the prominent causes of increased mortality among reefs globally, particularly in the Caribbean. Although over 40 different coral diseases and syndromes have been reported worldwide, only a few etiological agents have been confirmed; most pathogens remain unknown and the dynamics of disease transmission, pathogenicity and mortality are not understood. Causal relationships have been documented for only a few of the coral diseases, while new syndromes continue to emerge. Extensive field observations by coral biologists have provided substantial documentation of a plethora of new pathologies, but our understanding, however, has been limited to descriptions of gross lesions with names reflecting these observations (e.g., black band, white band, dark spot). To determine etiology, we must equip coral diseases scientists with basic biomedical knowledge and specialized training in areas such as histology, cell biology and pathology. Only through combining descriptive science with mechanistic science and employing the synthesis epizootiology provides will we be able to gain insight into causation and become equipped to handle the pending crisis. One of the critical challenges faced by coral disease researchers is to establish a framework to systematically study coral pathologies drawing from the field of diagnostic medicine and pathology and using generally accepted nomenclature. This process began in April 2004, with a workshop titled Coral Disease and Health Workshop: Developing Diagnostic Criteria co-convened by the Coral Disease and Health Consortium (CDHC), a working group organized under the auspices of the U.S. Coral Reef Task Force, and the International Registry for Coral Pathology (IRCP). The workshop was hosted by the U.S. Geological Survey, National Wildlife Health Center (NWHC) in Madison, Wisconsin and was focused on gross morphology and disease signs observed in the field. A resounding recommendation from the histopathologists participating in the workshop was the urgent need to develop diagnostic criteria that are suitable to move from gross observations to morphological diagnoses based on evaluation of microscopic anatomy. As a continuation of building the foundation and framework for coral disease diagnostics, the CDHC convened the Coral Disease and Health Workshop: Coral Histopathology II in Charleston, South Carolina, July 11-14, 2005. The workshop was hosted by the Department of Pathology and Laboratory Medicine at the Medical University of South Carolina, Charleston, SC which provided expertise, facilities and equipment in support of the workshop. All of the histological slides and related photographs used in the discussions were prepared and supplied by the IRCP. This workshop brought together 15 experts in veterinary and medical pathology and coral biology from national and international research institutes and government laboratories. The mission was to devise a standardized approach to examining microscopic anatomy and pathology of corals and a standardized nomenclature to facilitate accurate descriptions of the microscopic morphology of corals and enhance communication among specialists investigating causes of coral death. 2 The participants of this workshop deliberated for 3 days to refine the nomenclature for gross and microscopic anatomy of corals and systematically described microscopic changes associated with selected coral diseases. The findings and recommendations from the deliberations will be submitted to the research community for peer review. The standardized nomenclature and descriptions produced at this workshop will ultimately be made available to the scientific community through a variety of media including the World Wide Web. An exciting highlight of this meeting was provided by Professor Robert Ogilvie (MUSC Department of Cell Biology and Anatomy) when he introduced participants to a new digital technology that is revolutionizing histology and histopathology in the medical field. The Virtual Slide technology creates digital images of histological tissue sections by computer scanning actual slides in high definition and storing the images for retrieval and viewing. Virtual slides now allow any investigator with access to a computer and the web to view, search, annotate and comment on the same tissue sections in real time. Medical and veterinary slide libraries across the country are being converted into virtual slides to enhance biomedical education, research and diagnosis. The coral health and disease researchers at this workshop deem virtual slides as a significant way to increase capabilities in coral histology and a means for pathology consultations on coral disease cases on a global scale.

NOAA Technical Memorandum↗
USGS2003

Small-mammal density estimation: A field comparison of grid-based vs. web-based density estimators

Statistical models for estimating absolute densities of field populations of animals have been widely used over the last century in both scientific studies and wildlife management programs. To date, two general classes of density estimation models have been developed: models that use data sets from capture–recapture or removal sampling techniques (often derived from trapping grids) from which separate estimates of population size ( NÌ‚ ) and effective sampling area ( AÌ‚ ) are used to calculate density ( DÌ‚ = NÌ‚ / AÌ‚ ); and models applicable to sampling regimes using distance-sampling theory (typically transect lines or trapping webs) to estimate detection functions and densities directly from the distance data. However, few studies have evaluated these respective models for accuracy, precision, and bias on known field populations, and no studies have been conducted that compare the two approaches under controlled field conditions. In this study, we evaluated both classes of density estimators on known densities of enclosed rodent populations. Test data sets ( n = 11) were developed using nine rodent species from capture–recapture live-trapping on both trapping grids and trapping webs in four replicate 4.2-ha enclosures on the Sevilleta National Wildlife Refuge in central New Mexico, USA. Additional “saturation” trapping efforts resulted in an enumeration of the rodent populations in each enclosure, allowing the computation of true densities. Density estimates ( DÌ‚ ) were calculated using program CAPTURE for the grid data sets and program DISTANCE for the web data sets, and these results were compared to the known true densities ( D ) to evaluate each model's relative mean square error, accuracy, precision, and bias. In addition, we evaluated a variety of approaches to each data set's analysis by having a group of independent expert analysts calculate their best density estimates without a priori knowledge of the true densities; this “blind” test allowed us to evaluate the influence of expertise and experience in calculating density estimates in comparison to simply using default values in programs CAPTURE and DISTANCE. While the rodent sample sizes were considerably smaller than the recommended minimum for good model results, we found that several models performed well empirically, including the web-based uniform and half-normal models in program DISTANCE, and the grid-based models M b and M bh in program CAPTURE (with AÌ‚ adjusted by species-specific full mean maximum distance moved (MMDM) values). These models produced accurate DÌ‚ values (with 95% confidence intervals that included the true D values) and exhibited acceptable bias but poor precision. However, in linear regression analyses comparing each model's DÌ‚ values to the true D values over the range of observed test densities, only the web-based uniform model exhibited a regression slope near 1.0; all other models showed substantial slope deviations, indicating biased estimates at higher or lower density values. In addition, the grid-based DÌ‚ analyses using full MMDM values for WÌ‚ area adjustments required a number of theoretical assumptions of uncertain validity, and we therefore viewed their empirical successes with caution. Finally, density estimates from the independent analysts were highly variable, but estimates from web-based approaches had smaller mean square errors and better achieved confidence-interval coverage of D than did grid-based approaches. Our results support the contention that web-based approaches for density estimation of small-mammal populations are both theoretically and empirically superior to grid-based approaches, even when sample size is far less than often recommended. In view of the increasing need for standardized environmental measures for comparisons among ecosystems and through time, analytical models based on distance sampling appear to offer accurate density estimation approaches for research studies involving small-mammal abundances.

Ecological Monographs↗
USGS1990

Coastal mapping programs at the U.S. Fish and Wildlife Service's National Wetlands Research Center

Over the past 10 years, the U.S. Fish and Wildlife Service's (FWS) National Wetlands Research Center (center; formerly the National Coastal Ecosystems Team) has been continuously involved in the production of maps for use by coastal decision makers. The types of maps produced by the center have been national, regional, or local in scope depending on user needs. Map scales have ranged from 1:24,000 to 1:250,000. Themes depicted have included biological resources, including wetlands and seagrasses; upland habitat or land use; water resources such as water quality, bathymetry, and salinity; cultural features such as ownership, archaeological sites, and dredge-spoil disposal areas; and soils and landforms. We present overviews on the various mapping programs of the center. We highlight efforts such as the ecological inventories of the Atlantic, Gulf, and Pacific coasts; the ecological characterization atlases of the Gulf of Mexico; and the large scale (1:24,000) habitat maps of various coastal regions of the United States. Center methods and techniques are discussed, including the collaborative efforts between the center and FWS's National Wetlands Inventory for updating wetland maps and adding upland and seagrass bed delineations to inventory maps. We also make recommendations for future coastal ecosystem mapping programs that use conventional and automated mapping methodologies, such as geographic information systems and image processing.

Biological Report↗
USGS2006

Trace element concentrations and bioindicator responses in tree swallows from northwestern Minnesota

Extremely high concentrations of cadmium (3.5 μ g/g dry wgt.) and elevated concentrations of chromium (>10 μ g/g dry wgt.) and mercury (1.6 μ g/g dry wgt.) were reported in waterbird tissues at Agassiz National Wildlife Refuge in northwestern Minnesota in 1994. Tree swallows ( Tachycineta bicolor) were studied during 1998–2001 at three drainages into the Refuge, two pools on the Refuge, and at a nearby reference location to document whether high levels of contaminants were still present, and if so to quantify the source and severity of the contamination. Trace elements were measured in tree swallow eggs, livers, and diet. Reproductive success and bioindicator responses were monitored. In 2000, water was drawn down on Agassiz Pool, one of the main pools on the Refuge. This presented an opportunity to evaluate the response of trace element concentrations in the diet and tissues of tree swallows after reflooding. High concentrations of trace elements were not detected in swallow tissues, nor were there differences among locations. Less than 20% of swallow samples had detectable concentrations of cadmium or chromium. Mercury concentrations were low and averaged <0.25 μ g/g dry wgt. in swallow tissues. Trace elements, including mercury, did not increase in tree swallows following the 2000 drawdown at Agassiz Pool. Hatching success and survival of nestlings to 12 days-of-age for tree swallows on the Refuge were similar to the national average and consistent with background trace element concentrations. Bioindicator measurements were within the normal ranges as well.

Minnesota↗
USGS1986

Oil-source correlation study in northeastern Alaska

The occurrence of numerous oil-stained outcrops across the coastal plain of the Arctic National Wildlife Refuge (ANWR) in northeastern Alaska indicates that commercial hydrocarbons could be present in the subsurface of this region. In addition, this region is flanked by two important oil provinces—the Prudhoe Bay area to the west and the Mackenzie delta to the east. To begin to understand the petroleum resource potential of ANWR, we evaluated the source rock quality and thermal maturity of five rock units ranging in age from Triassic to early Tertiary: Shublik Formation, Kingak Shale, pebble shale unit, Hue Shale and Canning Shale. We also compared ANWR oils using stable carbon isotope ratios, tricyclic terpane ratios, and saturate/aromatic hydrocarbon ratios. The organic carbon content of the five rock units range from an average of 1.6 to 4.0 wt%. Cretaceous rocks from the coastal plain are thermally immature (vitrinite reflectance <0.5%) and in the southern mountains thermally mature to overmature (vitrinite reflectance 1.0–1.8%). In general, type III organic matter predominates in the Kingak Shale, pebble shale unit, and Canning Shale, and types II and III in the Hue Shale. ANWR oils are divided into three groups: (1) Jago oil type, includes oils from Angun Point, Katakturuk River and Jago River; (2) Manning oil type, from Manning Point near the coast of the Beaufort Sea; and (3) Kavik oil type, from Kavik west of the Canning River. None of the three oil types of ANWR compares favorably with the economically important oils from Prudhoe Bay and the National Petroleum Reserve of Alaska (NPRA). The most promising source rock for the otherd ANWR oil types could not be type II units of the Hue Shale. Possible source rocks for the other ANWR oil types could not be established.

Alaska↗
USGS2013

Abundance, distribution, and population trends of the iconic Hawaiian Honeycreeper, the ʻIʻiwi (Vestiaria coccinea) throughout the Hawaiian Islands

Naturalists in the 1800s described the ʻIʻiwi (Vestiaria coccinea) as one of the most abundant forest birds, detected in forested areas from sea level to tree line across all the major Hawaiian Islands. However, in the late 1800s, ʻIʻiwi began to disappear from low elevation forests, and by the mid-1900s, the species was largely absent from low- and mid-elevation areas. Today, ʻIʻiwi are restricted to high-elevation forests on the islands of Hawaiʻi, east Maui, and Kauaʻi, with a few birds apparently persisting on Oʻahu, Molokaʻi, and west Maui. ʻIʻiwi are highly vulnerable to introduced disease, and the prevalence of avian malaria in low and mid-elevations is believed to be the cause of ʻIʻiwi being restricted to high elevations where temperatures are too cold for the development of the disease and its mosquito vector. With global warming, it is feared that the disease will move quickly into the high-elevation forests where the last ʻIʻiwi reside, threatening their viability. The U.S. Fish and Wildlife Service was petitioned to list the ʻIʻiwi as an Endangered Species in 2010, and this report provides a comprehensive review of the abundance, distribution, and trends using historical survey data as well as the most recently available survey information (up to 2012). We estimate the total population size of ‘I‘iwi at 550,972–659,864 (mean = 605,418) individuals. Of these, 90 percent are on the island of Hawaiʻi, followed by east Maui (about 10 percent), with less than 1 percent on Kauaʻi. ʻIʻiwi population trends vary across the islands. ʻIʻiwi population in Kauaʻi has experienced sharp declines, with a projected trend of 92 percent decline over a 25 year period based on the 2000–2012 surveys. On East Maui, the northeastern region has experienced declines (34 percent over a 25 year period), while the southeastern region has been stable to moderately increasing. On the island of Hawaiʻi, population trends are mixed. On the windward side, populations are largely declining, although the northern section (Hakalau Forest) has stable populations. On the leeward side, results suggest a strongly increasing population, with estimates of as much as a 147 percent increase over a 25 year period from the Puʻu Waʻawaʻa region. However, it is unclear how much these results from the leeward side of Hawaiʻi show a population trend contrary to population trends in all other areas or are an artifact of a sparsely sampled area. Trends by elevation suggest a large decrease in numbers of ʻIʻiwi at elevations below 1,200 meters on Kauaʻi and northeast Maui. Low elevation ʻIʻiwi populations also appear to have decreased in other regions, although low-elevation areas are not surveyed as often as other areas because of their lack of native forest birds. An exception to this pattern was the lower portions of the Hakalau Forest National Wildlife Refuge Kona Unit in the central leeward part of the island of Hawaiʻi, where populations appeared stable at the lower elevations. Based on the most recent surveys (up to 2012), approximately 50 percent of ʻIʻiwi live in a narrow, 500-meter band at elevations of 1,200–1,700 meters, suggesting that ʻIʻiwi are vulnerable to future shifts in climate.

Hawai'i↗
USGS2012

Quantification of water-level variability effect on plant species populations using paleoecological and hydrological time series data

Soil cores provide valuable data on historical changes in vegetation and hydrologic conditions. Empirical models were developed to quantify the effect of meteorological and hydrologic forcing on plant species distributions over a 110-year period in Water Conservation Area 1 (WCA1) in the Florida Everglades, also known as the Arthur R. Marshall Loxahatchee National Wildlife Refuge. Empirical models that predict plant species distributions at sites within WCA1 were developed by linking temporally sparse seed bank data from soil cores with continuous multi-decadal daily meteorological and hydrologic time series data. The meteorological data included rainfall and maximum daily temperatures that spanned the entire study period of 110 years. The hydrologic data included stage data from two gages in WCA1 established in 1954. These stage data were hindcasted to be concurrent with the meteorological data by using correlation models that fit measured stages as a function of the meteorological parameters. The historical plant species data came from seven peat cores from WCA1. Different depths from each core were carbon-dated and assayed for relative percentages of 83 plant species using pollen counts. The oldest dates were more than 1,000 years old; however, only core data that overlapped the study period were used, for a total of 67 assays among the seven cores. Twenty-three of the species had ratios of at least 5 percent for one or more of the 67 assays, hereafter referred to as the "top23". Using the assays as input vectors, the top23 were grouped using the k-means clustering into four plant classes that represented the extent to which the various species have historically appeared together. This reduced the modeling problem to one of predicting the relative ratios of the four plant classes from the hindcasted stage time-series data. A separate empirical model was developed for each class using a multi-layer perceptron artificial neural network, which provides multivariate, nonlinear curve fitting. The models predicted the relative ratios of the classes, and the sums of the predictions are near 1. The coefficient of determination (R2) of the models varied from 0.87 to 0.96, indicating that the relative ratios of the plant classes are predictable, and therefore controllable, from stage forcing. Similar soil cores are available for the Coastal Plain of North Carolina and are planned for the Congaree National Park in South Carolina.

Florida↗
USGS2008

Yellow-billed Cuckoo Distribution, Abundance, and Habitat Use Along the Lower Colorado River and Its Tributaries, 2007 Annual Report

This 2007 annual report details the second season of a 2-year study documenting western yellow-billed cuckoo (Coccyzus americanus occidentalis) distribution, abundance, and habitat use throughout the Lower Colorado River Multi-Species Conservation Program boundary area. We conducted cuckoo surveys at 40 sites within 14 areas, between 11 June and 9 September 2007. The 169 surveys across all sites yielded 163 yellow-billed cuckoo detections. Cuckoos were detected at 25 of the 40 sites, primarily at the Bill Williams River National Wildlife Refuge (NWR) study area (n = 139 detections; 85 percent of all detections). Detections declined slightly through the cuckoo breeding season, with most detections occurring in the first and second survey periods (n = 92; 54 percent). We detected breeding activity only at the Bill Williams River NWR, where we confirmed 27 breeding events, including two nesting observations. However, the breeding status of most detected birds was unknown. We used playback broadcast recordings to survey for yellow-billed cuckoos. Compared to simple point counts or surveys, this method increases the number of detections of this secretive, elusive species. It has long been suspected that cuckoos have a fairly low response rate, and that the standard survey method of using broadcast recordings might fail to detect all birds present in an area. In 2007, we found that the majority (84 percent) of cuckoo detections were solicited through broadcast at all study sites. The number of solicited detections was highest during the first survey period and declined as the breeding season progressed, while the number of unsolicited detections (cuckoos heard calling before broadcast was initiated) remained fairly constant through the first, second, and third survey periods. The majority (66 percent) of cuckoo detections, solicited or unsolicited, were aural, 23 percent were both heard and seen, and 11 percent were visual detections only. We also found that 50 percent of all responses by cuckoos were evenly split between the first and second broadcasts at sites with >10 detections, while 45 percent of responses occurred after a single broadcast at the sites with <10 detections. We refined our collection of vegetation data in 2007 and found that across the entire study area the dominant tree species were tamarisk (Tamarix spp.), willow (Salix spp.), and cottonwood (Populus spp.). The smallest size class (<8 cm diameter at breast height) trees were the most common and were dominated by tamarisk, but cottonwood and willows were well represented in the larger size classes. Sites that were occupied by yellow-billed cuckoos generally had higher canopies, denser cover in the upper layers of the canopy, and sparse shrub layers compared to unoccupied sites that consistently had higher densities of woody species. As most occupied sites were within the Bill Williams River NWR and most unoccupied sites were at Grand Canyon National Park/Lake Mead National Recreation Area, vegetation characteristics at these study areas drove the cuckoo distribution patterns we observed in 2007. However, there was a range of habitat conditions in locations that were used by yellow-billed cuckoos across the entire lower Colorado River Multi-Species Conservation Program study area. We measured microclimate variables (temperature, relative humidity, soil moisture) at occupied and unoccupied sites, and found that, across the entire study area, occupied sites were consistently cooler during the day and more humid during the day and night compared to unoccupied sites, but that soil moisture did not differ between occupied and unoccupied sites. While most cuckoo detections occurred at Bill Williams River NWR, with generally cooler and more humid conditions, cuckoos were also detected at study areas that had hotter and dryer microclimate conditions. We did not find any relationship of canopy cover characteristics to temperature or soil moisture, suggesting

Open-File Report↗
USGS2011

Vegetation communities at Big Muddy National Fish and Wildlife Refuge, Missouri

New and existing data were used to describe and map vegetation communities at Big Muddy National Fish and Wildlife Refuge. Existing data had been gathered during the growing seasons of 2002, 2003, and 2004. New data were collected in 2007 to describe previously unsampled communities and communities within which insufficient data had been collected. Plot data and field observations were used to describe 17 natural and semi-natural communities at the Association level of the National Vegetation Classification System (NVCS). Four ruderal communities not included in the NVCS are also described. Data were used to inform delineation of communities using aerial photos from 2000, 2002, 2003, 2005, 2006, and 2007. During this process, eleven additional land cover classes including cultural features, managed vegetation communities, and water features were identified. These features were mapped, some were described, but no vegetation data were collected. In 2009, nearly all community polygons were field visited and classified to the Association level. When necessary, polygon boundaries were adjusted based on field observations. The final map includes 482 polygons of 27 land cover classes encompassing 3,174 hectares on 5 units of the refuge. Data and information will inform the development of the refuge Comprehensive Conservation Plan.

Missouri↗
USGS2000

Hind limb malformations in free-living northern leopard frogs (Rana pipiens) from Maine, Minnesota, and Vermont suggest multiple etiologies

Background Reports of malformed frogs have increased throughout the North American continent in recent years. Most of the observed malformations have involved the hind limbs. The goal of this study was to accurately characterize the hind limb malformations in wild frogs as an important step toward understanding the possible etiologies. Methods During 1997 and 1998, 182 recently metamorphosed northern leopard frogs (Rana pipiens) were collected from Minnesota, Vermont, and Maine. Malformed hind limbs were present in 157 (86%) of these frogs, which underwent necropsy and radiographic evaluation at the National Wildlife Health Center. These malformations are described in detail and classified into four major categories: (1) no limb (amelia); (2) multiple limbs or limb elements (polymelia, polydactyly, polyphalangy); (3) reduced limb segments or elements (phocomelia, ectromelia, ectrodactyly, and brachydactyly; and (4) distally complete but malformed limb (bone rotations, bridging, skin webbing, and micromelia). Results Amelia and reduced segments and/or elements were the most common finding. Frogs with bilateral hind limb malformations were not common, and in only eight of these 22 frogs were the malformations symmetrical. Malformations of a given type tended to occur in frogs collected from the same site, but the types of malformations varied widely among all three states, and between study sites within Minnesota. Conclusions Clustering of malformation type suggests that developmental events may produce a variety of phenotypes depending on the timing, sequence, and severity of the environmental insult. Hind limb malformations in free-living frogs transcend current mechanistic explanations of tetrapod limb development.

Maine, Minnesota, Vermont↗