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USGS2001

Fire and grazing regulate belowground processes in tallgrass prairie

In tallgrass prairie, belowground processes are even more important than in forested systems because aboveground biomass and standing dead litter are periodically removed by frequent fires or grazers. Thus, studies that address factors regulating belowground processes are especially relevant for tallgrass prairie. We predicted that effects of grazing and burning differ belowground and that changes in root productivity caused by burning or grazing provide feedback that affects ecosystem fluxes of C and N. These differences in belowground response should be driven largely by changes in N dynamics and the degree to which burning and grazing affect the pathway and magnitude of N loss and the degree of N limitation in these systems. Fire, the major pathway of N loss in ungrazed tallgrass prairie, should result in reduced net N mineralization and N availability. We expected plants to compensate for increased N limitation by increasing their allocation to roots, as manifested in increased soil respiration and C cycling belowground. In contrast, grazing conserves N in the ecosystem by redistributing the N once contained in grass to labile forms in urine and dung. Thus, we predicted that grazing should increase N cycling rates and N availability to plants. Consequently, grazed plants should be less N limited and should allocate less C to roots and more to shoots. This, in turn, should decrease belowground C cycling, manifested as reduced soil CO 2 flux. We explored the roles of grazing and burning on root growth in experimental watersheds at Konza Prairie, Kansas, USA. To assess effects of fire on root productivity, we installed root ingrowth cores in two watersheds without grazers that differ in fire frequency: annually vs. infrequently burned (four years since the last fire). To assess effects of grazing, we installed root ingrowth cores in an annually burned watershed grazed by bison and in fenced controls (exclosures). Within bison “grazing lawns,” root ingrowth cores were installed in lightly and heavily grazed patches. Concurrently, we measured in situ rates of net N mineralization and soil respiration as indices of soil N and C cycling. Annual burning resulted in a 25% increase in root growth compared to the unburned watershed (four years since last fire), as plants compensated for N limitation by increasing allocation to roots. Grazing had the opposite effect: it decreased root growth, especially in heavily grazed patches (∼30% less than in fenced controls). Grazing by ungulates increased N cycling and availability. Therefore, grazed plants, instead of being N limited, experienced C limitation as shoots regrew and plants allocated less C to roots. Interestingly, root ingrowth on the long-term unburned watershed was as low as in lightly grazed patches in the grazed watershed. Thus, seemingly disparate treatments such as infrequent burning (characterized by accumulation of detritus aboveground) and grazing (periodic biomass removal) both had higher levels of N availability than annually burned prairie in the absence of grazers. Root growth in unburned and grazed watersheds must be limited by resources other than N (e.g., C in grazing lawns or light in infrequently burned prairie). Burning and grazing also altered root tissue chemistry in contrasting ways that further accentuated the root growth differences caused by these treatments. Frequent fires lowered substrate quality of roots (C:N = 60), thus increasing N limitation. In contrast, grazing and infrequent burning improved root tissue quality (C:N = 40), promoting faster cycling of N. These large differences in root growth and tissue chemistry can result in profound ecosystem-level changes. Grazing increased net N mineralization rates from 87% to 617% compared to watersheds without grazers, whereas annual burning decreased it by ∼50% compared to unburned prairie. Although grazing speeded up N cycling, it reduced soil respiration by 50% compared to fenced controls, presumably because of reduced root mass. On the other hand, annual burning increased soil respiration, presumably because of increased root biomass. Ultimately, differences in the quantity and quality of roots provide feedback to affect C and N cycling and help to maintain and even promote the fundamental differences in N cycling between burning and grazing in tallgrass prairie.

Ecology↗

USGS2016

The Iġnik Sikumi Field Experiment, Alaska North Slope: Design, operations, and implications for CO 2 −CH 4 exchange in gas hydrate reservoirs

The Iġnik Sikumi Gas Hydrate Exchange Field Experiment was conducted by ConocoPhillips in partnership with the U.S. Department of Energy, the Japan Oil, Gas and Metals National Corporation, and the U.S. Geological Survey within the Prudhoe Bay Unit on the Alaska North Slope during 2011 and 2012. The primary goals of the program were to (1) determine the feasibility of gas injection into hydrate-bearing sand reservoirs and (2) observe reservoir response upon subsequent flowback in order to assess the potential for CO 2 exchange for CH 4 in naturally occurring gas hydrate reservoirs. Initial modeling determined that no feasible means of injection of pure CO 2 was likely, given the presence of free water in the reservoir. Laboratory and numerical modeling studies indicated that the injection of a mixture of CO 2 and N 2 offered the best potential for gas injection and exchange. The test featured the following primary operational phases: (1) injection of a gaseous phase mixture of CO 2 , N 2 , and chemical tracers; (2) flowback conducted at downhole pressures above the stability threshold for native CH 4 hydrate; and (3) an extended (30-days) flowback at pressures near, and then below, the stability threshold of native CH 4 hydrate. The test findings indicate that the formation of a range of mixed-gas hydrates resulted in a net exchange of CO 2 for CH 4 in the reservoir, although the complexity of the subsurface environment renders the nature, extent, and efficiency of the exchange reaction uncertain. The next steps in the evaluation of exchange technology should feature multiple well applications; however, such field test programs will require extensive preparatory experimental and numerical modeling studies and will likely be a secondary priority to further field testing of production through depressurization. Additional insights gained from the field program include the following: (1) gas hydrate destabilization is self-limiting, dispelling any notion of the potential for uncontrolled destabilization; (2) gas hydrate test wells must be carefully designed to enable rapid remediation of wellbore blockages that will occur during any cessation in operations; (3) sand production during hydrate production likely can be managed through standard engineering controls; and (4) reservoir heat exchange during depressurization was more favorable than expected—mitigating concerns for near-wellbore freezing and enabling consideration of more aggressive pressure reduction.

Energy & Fuels↗

USGS2017

Field-trip guide for exploring pyroclastic density current deposits from the May 18, 1980, eruption of Mount St. Helens, Washington

Pyroclastic density currents (PDCs) are one of the most dangerous phenomena associated with explosive volcanism. To help constrain damage potential, a combination of field studies, laboratory experiments, and numerical modeling are used to establish conditions that influence PDC dynamics and depositional processes, including runout distance. The objective of this field trip is to explore field relations that may constrain PDCs at the time of emplacement. The PDC deposits from the May 18, 1980, eruption of Mount St. Helens are well exposed along the steep flanks (10–30° slopes) and across the pumice plain (5–12° slopes) as far as 8 km north of the volcano. The pumice plain deposits represent deposition from a series of concentrated PDCs and are primarily thick (3–12 m), massive, and poorly sorted. In contrast, the steep east-flank deposits are stratified to cross-stratified, suggesting deposition from PDCs where turbulence strongly influenced transport and depositional processes. The PDCs that descended the west flank were largely nondepositional; they maintained a higher flow energy and carrying capacity than PDCs funneled through the main breach, as evidenced by the higher concentration of large blocks in their deposits. The PDC from the west flank collided with PDCs funneled through the breach at various points along the pumice plain. Evidence for flow collision will be explored and debated throughout the field trip. Evidence for substrate erosion and entrainment is found (1) along the steep eastern flank of the volcano, which has a higher degree of rough, irregular topography relative to the west flanks where PDCs were likely nonerosive, (2) where PDCs encountered debris-avalanche hummocks across the pumice plain, and (3) where PDCs eroded and entrained material deposited by PDCs produced during earlier phases of the eruption. Two features interpreted as large-scale (tens of meters wide) levees and a large (~200 m wide) channel scour-and-fill feature provide the first evidence of self-channelization within PDCs sustained for minutes to tens of minutes (total volume of deposits is ~0.12 km 3 ; area covered is ~15.5 km 2 ; Rowley and others, 1981). Our ability to interpret the deposits of PDCs is critical for understanding transport and depositional processes that control PDC dynamics. The results of extensive work on the May 18, 1980, PDC deposits show that slope and irregular topography strongly influence PDC flow path, dynamics, criticality (for example, supercritical versus subcritical), carrying capacity, and erosive capacity. However, the influence of these conditions on ultimate flow runout and damage potential warrants further exploration through the combination of field, experimental, and numerical approaches.

Washington↗

USGS2015

Evidence of low genetic variation and rare alleles in a bottlenecked endangered island endemic, the Lasan Teal (Anas laysanensis)

Genetic diversity is assumed to reflect the evolutionary potential and adaptability of populations, and thus quantifying the genetic diversity of endangered species is useful for recovery programs. In particular, if conservation strategies include reintroductions, periodic genetic assessments are useful to evaluate whether management efforts have resulted in the maximization or loss of genetic variation within populations over generations. In this study, we collected blood, feather, and tissue samples during 1999–2009 and quantified genetic diversity for a critically endangered waterfowl species endemic to the Hawaiian archipelago, the Laysan teal or duck (Anas laysanensis; n = 239 individual birds sampled). The last extant population of this species at Laysan Island was sourced in 2004–2005 for a ‘wild to wild’ translocation of 42 individuals for an experimental reintroduction to Midway Atoll. To inform future management strategies, we compared genetic diversity sampled from the source population (n = 133 Laysan birds) including 23 of Midway’s founders and offspring of the translocated population 2–5 years post release (n = 96 Midway birds). We attempted to identify polymorphic markers by screening nuclear microsatellite (N = 83) and intronic loci (N = 19), as well as the mitochondrial control region (mtDNA) for a subset of samples. Among 83 microsatellite loci screened, six were variable. We found low nuclear variation consistent with the species’ historical population bottlenecks and sequence variation was observed at a single intron locus. We detected no variation within the mtDNA. We found limited but similar estimates of allelic richness (2.58 alleles per locus) and heterozygosity within islands. Two rare alleles found in the Laysan Island source population were not present in the Midway translocated group, and a rare allele was discovered in an individual on Midway in 2008. We found similar genetic diversity and low, but statistically significant, levels of differentiation (0.6%) between island populations suggesting that genetic drift (as a result of translocation-induced population bottlenecking) has had a limited effect within five years post-release. Our results have utility for informing translocation and genetic management decisions.

Hawaii↗

USGS2021

11-Deoxycortisol is a stress responsive and gluconeogenic hormone in the jawless vertebrate, the sea lamprey (Petromyzon marinus)

Although corticosteroid-mediated hepatic gluconeogenic activity in response to stress has been extensively studied in fishes and other vertebrates, there is little information on the stress response in basal vertebrates. In sea lamprey ( Petromyzon marinus ), a representative member of the most basal extant vertebrate group Agnatha, 11-deoxycortisol and deoxycorticosterone are the major circulating corticosteroids. The present study examined changes in circulating glucose and 11-deoxycortisol concentrations in response to a physical stressor. Furthermore, the gluconeogenic actions of 11-deoxycortisol and deoxycorticosterone were examined. Within 6 h of exposure of larval and juvenile sea lamprey to an acute handling stress, plasma 11-deoxycortisol levels increased 15- and 6-fold, respectively, and plasma glucose increased 3- and 4-fold, respectively. Radiometric receptor binding studies revealed that a corticosteroid receptor (CR) is present in the liver at lower abundance than in other tissues (gill and anterior intestine) and that the binding affinity of the liver CR was similar for 11-deoxycortisol and deoxycorticosterone. Transcriptional tissue profiles indicate a wide distribution of cr transcription, kidney-specific transcription of steroidogenic acute regulatory protein ( star ) and liver-specific transcription of phosphoenolpyruvate carboxykinase ( pepck ). Ex vivo incubation of liver tissue with 11-deoxycortisol resulted in dose-dependent increases in pepck mRNA levels. Finally, intraperitoneal administration of 11-deoxycortisol and deoxycorticosterone demonstrated that only 11-deoxycortisol resulted in an increase in plasma glucose. Together, these results provide the first direct evidence for the gluconeogenic activity of 11-deoxycortisol in an agnathan, indicating that corticosteroid regulation of plasma glucose is a basal trait among vertebrates.

Journal of Experimental Biology↗

USGS2006

Forecasting runout of rock and debris avalanches

Physically based mathematical models and statistically based empirical equations each may provide useful means of forecasting runout of rock and debris avalanches. This paper compares the foundations, strengths, and limitations of a physically based model and a statistically based forecasting method, both of which were developed to predict runout across three-dimensional topography. The chief advantage of the physically based model results from its ties to physical conservation laws and well-tested axioms of soil and rock mechanics, such as the Coulomb friction rule and effective-stress principle. The output of this model provides detailed information about the dynamics of avalanche runout, at the expense of high demands for accurate input data, numerical computation, and experimental testing. In comparison, the statistical method requires relatively modest computation and no input data except identification of prospective avalanche source areas and a range of postulated avalanche volumes. Like the physically based model, the statistical method yields maps of predicted runout, but it provides no information on runout dynamics. Although the two methods differ significantly in their structure and objectives, insights gained from one method can aid refinement of the other.

Conference Paper↗

USGS2003

Comment on “Isotopic fractionation between Fe(III) and Fe(II) in aqueous solutions” by Clark Johnson et al., [Earth Planet. Sci. Lett. 195 (2002) 141–153]

In a recent contribution [1] , Johnson et al. reported the equilibrium isotope fractionation factor between dissolved Fe(II) and Fe(III) in aqueous solutions at pH=2.5 and 5.5. They suggest that because the iron isotope fractionation observed in their experiments spans virtually the entire range observed in sedimentary rocks, Fe(II)–Fe(III) aqueous speciation may play a major role in determining iron isotope variations in nature where Fe(II) and Fe(III) can become physically separated. They discounted earlier conclusions by us and others [2] ; [3] that significant equilibrium fractionation between specific coexisting Fe(II)- or Fe(III)-aqueous complexes (e.g., between aqueous Fe(II)(OH) x(aq) and Fe(II) (aq) ion) is capable of producing iron isotope contrasts that can be preserved in nature. This is an important contribution not only because the authors recognize the importance of abiotic equilibrium iron isotope fractionation in nature in contrast to previous assertions [4] , but also because it will help to focus discussion on the development and evaluation of experimental approaches that can reveal abiotic fractionation mechanisms. However, in this Comment we propose that the experiments presented in this paper cannot be interpreted as straightforwardly as Johnson et al. contend. In particular, we show that in one of their critical experiments attainment of either isotope mass balance or equilibrium was not demonstrated, and thus the results of that experiment cannot be used to calculate an Fe(II)–Fe(III) equilibrium fractionation factor.

Earth and Planetary Science Letters↗

USGS2004

Gas evolution in eruptive conduits: Combining insights from high temperature and pressure decompression experiments with steady-state flow modeling

In this paper we examine the consequences of bubble nucleation mechanism on eruptive degassing of rhyolite magma. We use the results of published high temperature and pressure decompression experiments as input to a modified version of CONFLOW, the numerical model of Mastin and Ghiorso [(2000) U.S.G.S. Open-File Rep. 00-209, 53 pp.] and Mastin [(2002) Geochem. Geophys. Geosyst. 3, 10.1029/2001GC000192] for steady, two-phase flow in vertical conduits. Synthesis of the available experimental data shows that heterogeneous nucleation is triggered at ΔP <5–20 MPa in water-saturated rhyolite and leads to equilibrium degassing through a discrete nucleation event. Typically 10 5 –10 7 bubbles/cm 3 are produced which evolve Gaussian bubble size distributions. Homogeneous nucleation requires ΔP >120–150 MPa, and leads to disequilibrium degassing at extreme H 2 O supersaturation. In this latter case, nucleation is an ongoing process controlled by changing supersaturation conditions. Exponential bubble size distributions are often produced with number densities of 10 6 –10 9 bubbles/cm 3 . Our numerical analysis adopts an end-member approach that specifically compares equilibrium degassing with delayed, disequilibrium degassing characteristic of homogeneously-nucleating systems. The disequilibrium simulations show that delaying nucleation until ΔP =150 MPa restricts degassing to within ∼1500 m of the surface. Fragmentation occurs at similar porosity in both the disequilibrium and equilibrium modes (∼80 vol%), but at the distinct depths of ∼500 m and ∼2300 m, respectively. The vesiculation delay leads to higher pressures at equivalent depths in the conduit, and the mass flux and exit pressure are each higher by a factor of ∼2.0. Residual water contents in the melt reaching the vent are between 0.5 and 1.0 wt%, roughly twice that of the equilibrium model.

Journal of Volcanology and Geothermal Research↗

USGS2026

Variation in pathogen load and the pathogen load–infectiousness relationship broaden avian malaria’s distribution

Two aspects of host infectiousness shape pathogen transmission and distribution but are underappreciated: the relationship between pathogen load and infectiousness, and variability in pathogen load within species. We quantified the relationship between host pathogen load (parasitemia) for avian malaria ( Plasmodium relictum ) and infectiousness for biting Culex quinquefasciatus mosquitoes with experimental infections in canaries ( Serinus canaria ). Using this relationship, we estimated the infectiousness of 17 bird species in 11 communities in Hawaiʻi and quantified the relative contributions of infection stage (acute versus chronic) to transmission. We show that infectiousness to mosquitoes increased with parasitemia, temperature, and time since feeding. The relationship’s gradual (low) parasitemia slope resulted in a wide range of parasitemias being partly infectious, and high within-host species variability in parasitemia led to extensive overlap in infectiousness among hosts. Disproportionate mosquito host utilization (inferred from relative infection prevalence) elevated the importance of a few host species, yet broad overlap in species infectiousness resulted in similar total infectiousness across most bird communities. This similarity likely contributed to avian malaria’s widespread distribution throughout Hawaiʻi despite diverse host community assemblages. Our findings highlight the importance of both the shape of the pathogen load–infectiousness relationship and within-species variability in determining a pathogen’s host range, transmission intensity, and spatial spread.

Nature Communications↗

USGS2023

Damage amplification during repetitive seismic waves in mechanically loaded rocks

Cycles of stress build-up and release are inherent to tectonically active planets. Such stress oscillations impart strain and damage, prompting mechanically loaded rocks and materials to fail. Here, we investigate, under uniaxial conditions, damage accumulation and weakening caused by time-dependent creep (at 60, 65, and 70% of the rocks’ expected failure stress) and repeating stress oscillations (of ± 2.5, 5.0 or 7.5% of the creep load), simulating earthquakes at a shaking frequency of ~ 1.3 Hz in volcanic rocks. The results show that stress oscillations impart more damage than constant loads, occasionally prompting sample failure. The magnitudes of the creep stresses and stress oscillations correlate with the mechanical responses of our porphyritic andesites, implicating progressive microcracking as the cause of permanent inelastic strain. Microstructural investigation reveals longer fractures and higher fracture density in the post-experimental rock. We deconvolve the inelastic strain signal caused by creep deformation to quantify the amount of damage imparted by each individual oscillation event, showing that the magnitude of strain is generally largest with the first few oscillations; in instances where pre-existing damage and/or the oscillations’ amplitude favour the coalescence of micro-cracks towards system scale failure, the strain signal recorded shows a sharp increase as the number of oscillations increases, regardless of the creep condition. We conclude that repetitive stress oscillations during earthquakes can amplify the amount of damage in otherwise mechanically loaded materials, thus accentuating their weakening, a process that may affect natural or engineered structures. We specifically discuss volcanic scenarios without wholesale failure, where stress oscillations may generate damage, which could, for example, alter pore fluid pathways, modify stress distribution and affect future vulnerability to rupture and associated hazards.

Scientific Reports↗

USGS2004

Is predation on waterfowl nests density dependent? Tests at three spatial scales

We tested whether predation on duck nests ( Anas spp.) was density dependent at three spatial scales using artificial and natural nests in the Suisun Marsh, California, USA. At the largest spatial scale, we used 5 years (1998–2002) of data to examine the natural variation in duck nest success and nest densities among 8–16 fields per year, each 5–33 ha in size (n=62 fields). At an intermediate spatial scale, we deployed artificial nests (2000, n=280) within 1-ha plots at three experimental densities (5, 10, and 20 nests ha −1 ) in a complete randomized block design and examined differences in nest predation. At the smallest spatial scale, we examined nest success in relation to nearest-neighbor fates and distances for artificial (2000, n=280) and natural nests (2000, n=507). We detected no relationship between nest success and the density of natural nests among fields in any year, nor when we pooled data for all years after controlling for year effects. The proportion of artificial nests that survived also did not depend on experimental nest densities within 1-ha plots. Overall, 15.0±12.4%, 15.0±11.0%, and 6.2±4.3% of artificial nests survived the 32-day exposure period in the low, intermediate, and high nest densities, respectively. Additionally, we detected no consistent effect of nearest-neighbor fate or distance on the success of artificial or natural nests. Thus, our results provide no evidence of density-dependent predation on duck nests at any scale of analysis, in contrast to a number of previous studies. Variation among geographical locations in the degree to which predation is density-dependent may reflect the composition of the predator community and the availability of alternate prey.

Oikos↗

USGS2006

Parent birds assess nest predation risk and adjust their reproductive strategies

Avian life history theory has long assumed that nest predation plays a minor role in shaping reproductive strategies. Yet, this assumption remains conspicuously untested by broad experiments that alter environmental risk of nest predation, despite the fact that nest predation is a major source of reproductive failure. Here, we examined whether parents can assess experimentally reduced nest predation risk and alter their reproductive strategies. We experimentally reduced nest predation risk and show that in safer environments parents increased investment in young through increased egg size, clutch mass, and the rate they fed nestlings. Parents also increased investment in female condition by increasing the rates that males fed incubating females at the nest, and decreasing the time that females spent incubating. These results demonstrate that birds can assess nest predation risk at large and that nest predation plays a key role in the expression of avian reproductive strategies. ?? 2006 Blackwell Publishing Ltd/CNRS.

Ecology Letters↗

USGS1981

Growth and survival of Atlantic salmon fed various starter diets

Growth and survival were compared for groups of first‐feeding fry of Atlantic salmon (Salmo salar) fed various commercially available and experimental starter diets. In two separate 8‐ to 9‐week studies, survival was highest (more than 90%) in fish fed a semimoist closed‐formula commercial diet (BioDiet). In one study, fish grew fastest on BioDiet, whereas in the second study they grew fastest on a liver‐supplemented diet. Some diets were not eaten by the fish, resulting in little growth and less than 40% survival.

Progressive Fish-Culturist↗

USGS2001

Sarcocystis neurona infections in sea otter (Enhydra lutris): Evidence for natural infections with sarcocysts and transmission of infection to opossums (Didelphis virginiana)

Although Sarcocystis neurona has been identified in an array of terrestrial vertebrates, recent recognition of its capacity to infect marine mammals was unexpected. Here, sarcocysts from 2 naturally infected sea otters (Enhydra lutris) were characterized biologically, ultrastructurally, and genetically. DNA was extracted from frozen muscle of the first of these sea otters and was characterized as S. neurona by polymerase chain reation (PCR) amplification followed by restriction fragment length polymorphism analysis and sequencing. Sarcocysts from sea otter no. 1 were up to 350 I?m long, and the villar protrusions on the sarcocyst wall were up to 1.3 I?m long and up to 0.25 I?m wide. The villar protrusions were tapered towards the villar tip. Ultrastructurally, sarcocysts were similar to S. neurona sarcocysts from the muscles of cats experimentally infected with S. neurona sporocysts. Skeletal muscles from a second sea otter failed to support PCR amplification of markers considered diagnostic for S. neurona but did induce the shedding of sporocysts when fed to a laboratory-raised opossum (Didelphis virginiana). Such sporocysts were subsequently fed to knockout mice for the interferon-gamma gene, resulting in infections with an agent identified as S. neurona on the basis of immunohistochemistry, serum antibodies, and diagnostic sequence detection. Thus, sea otters exposed to S. neurona may support the development of mature sarcocysts that are infectious to competent definitive hosts.

Washington↗

USGS2004

Movements of flightless long-tailed ducks during wing molt

We examined the movements of flightless Long-tailed Ducks ( Clangula hyemalis ) during the wing molt in the near-shore lagoons of the Beaufort Sea in Alaska. Estimates of site fidelity during the 21-day flightless period ranged from 1-100%, with considerable variation among locations and within locations among years. There was no effect of low-level experimental disturbance or an underwater seismic survey on site fidelity of molting Long-tailed Ducks. Birds molting along a relatively consistent habitat gradient were more likely to move than those molting in a fragmented habitat. While flocks of birds are consistently observed in the same locations, these data suggest considerable turnover within these aggregations. These results, in conjunction with other studies, suggest that forage is relatively uniformly distributed within lagoons. We conclude that habitat selection by molting Long-tailed Ducks is likely influenced by protection from wind and associated waves.

Waterbirds↗

USGS2018

Passive experimental warming decouples air and sediment temperatures in a salt marsh

Open top chambers (OTCs) are a commonly used passive warming technique in experimental warming studies. OTCs have been shown to be effective in multiple types of terrestrial systems, but their utility in wetland environments remains uncertain. The objective of this work was to evaluate the effectiveness of using OTCs to warm a temperate salt marsh across diurnal and seasonal cycles. We found that OTCs are effective at warming air temperatures on the marsh, with average air temperatures 1.6 ± 0.007 °C and 1.1 ± 0.006 °C warmer within the high and low marsh, respectively over a 16-month period. In contrast, OTCs were ineffective at warming sediments, especially during the day. In fact, sediment temperatures within the OTC were cooler during the day relative to ambient conditions. Such daytime warming of air, but cooling of sediments relative to ambient conditions resulted in a significant decoupling of above and belowground temperatures in the marsh (r = -0.99 and -0.82 on low and high marsh, respectively). Our data indicate that shading by OTCs was responsible for the daytime sediment cooling relative to ambient conditions during most of the year, as incoming solar radiation was reduced by 30% within OTCs. Wet sediments require more energy to heat than the air due to their higher specific heat capacity. Thus, reductions in radiation by OTCs prevented effective warming of sediments, but still allowed for the warming of air. In turn, we conclude that OTCs are not an effective method to experimentally warm tidal marsh sediments.

Limnology and Oceanography: Methods↗

USGS2024

Environmental DNA dynamics of three species of unionid freshwater mussels

North American freshwater mussels are of special conservation concern due to their high endemism and the multiple anthropogenic stressors affecting them. Of the over 300 species in North America, nearly one third of these species are federally listed as threatened or endangered. Environmental DNA (eDNA) analysis has been successful in detecting freshwater mussels and could aid in monitoring their populations. Production and degradation rates of eDNA for the species of interest are needed to inform interpretation of eDNA detections, allow possible modeling of relative abundance and population location, and aid in mussel conservation through population identification. Here, we designed and tested qPCR assays for three freshwater mussel species, mucket ( Ortmanniana ligamentina ), fatmucket ( Lampsilis siliquoidea ), and the federally endangered spectaclecase ( Cumberlandia monodonta ). We performed laboratory experiments under controlled conditions to measure eDNA shedding and degradation rates for each species. Different biomasses, temperatures, and food regimens were tested independently to determine if these factors influence the amount of DNA produced by the mussels. Degradation rates of eDNA were measured from experimental tank water after mussels were removed. Overall, we observed low eDNA shedding rates for freshwater mussels compared to previous studies of fish eDNA shedding rates. Furthermore, temperature and feeding showed limited or no significant effects in the species studied. Environmental DNA degradation rates were consistent with those reported in the literature for other taxa. Collectively, our results will be useful for designing eDNA monitoring studies, modeling eDNA dispersal, and interpreting eDNA results to help inform freshwater mussel conservation efforts.

Environmental DNA↗

USGS1998

Optical-cell evidence for superheated ice under gas-hydrate-forming conditions

We previously reported indirect but compelling evidence that fine-grained H 2 O ice under elevated CH 4 gas pressure can persist to temperatures well above its ordinary melting point while slowly reacting to form methane clathrate hydrate. This phenomenon has now been visually verified by duplicating these experiments in an optical cell while observing the very slow hydrate-forming process as the reactants were warmed from 250 to 290 K at methane pressures of 23 to 30 MPa. Limited hydrate growth occurred rapidly after initial exposure of the methane gas to the ice grains at temperatures well within the ice subsolidus region. No evidence for continued growth of the hydrate phase was observed until samples were warmed above the equilibrium H 2 O melting curve. With continued heating, no bulk melting of the ice grains or free liquid water was detected anywhere within the optical cell until hydrate dissociation conditions were reached (292 K at 30 MPa), even though full conversion of the ice grains to hydrate requires 6−8 h at temperatures approaching 290 K. In a separate experimental sequence, unreacted portions of H 2 O ice grains that had persisted to temperatures above their ordinary melting point were successfully induced to melt, without dissociating the coexisting hydrate in the sample tube, by reducing the pressure overstep of the equilibrium phase boundary and thereby reducing the rate of hydrate growth at the ice−hydrate interface. Results from similar tests using CO 2 as the hydrate-forming species demonstrated that this superheating effect is not unique to the CH 4 −H 2 O system.

Journal of Physical Chemistry B↗