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Acoustic telemetry and fisheries management

This paper reviews the use of acoustic telemetry as a tool for addressing issues in fisheries management, and serves as the lead to the special Feature Issue of Ecological Applications titled “Acoustic Telemetry and Fisheries Management” . Specifically, we provide an overview of the ways in which acoustic telemetry can be used to inform issues central to the ecology, conservation, and management of exploited and/or imperiled fish species. Despite great strides in this area in recent years, there are comparatively few examples where data have been applied directly to influence fisheries management and policy. We review the literature on this issue, identify the strengths and weaknesses of work done to date, and highlight knowledge gaps and difficulties in applying empirical fish telemetry studies to fisheries policy and practice. We then highlight the key areas of management and policy addressed, as well as the challenges that needed to be overcome to do this. We conclude with a set of recommendations about how researchers can, in consultation with stock assessment scientists and managers, formulate testable scientific questions to address and design future studies to generate data that can be used in a meaningful way by fisheries management and conservation practitioners. We also urge the involvement of relevant stakeholders (managers, fishers, conservation societies, etc.) early on in the process (i.e. in the co-creation of research projects), so that all priority questions and issues can be addressed effectively.

Ecological Applications↗

Magnetic anomaly map of North America

This digital Magnetic Anomaly database and map for the North American continent is the result of a joint effort by the Geological Survey of Canada (GSC), U.S. Geological Survey (USGS), and Consejo de Recursos Minerales of Mexico (CRM). The database and map represent a substantial upgrade from the previous compilation of Magnetic Anomaly data for North America, now over a decade old (Committee for the Magnetic Anomaly Map of North America, 1987). This integrated, readily accessible, modern digital database of magnetic anomaly data will be a powerful tool for further evaluation of the structure, geologic processes, and tectonic evolution of the continent and may also be used to help resolve societal and scientific issues that span national boundaries. The North American magnetic anomaly map derived from the digital database provides a comprehensive magnetic view of continental-scale trends not available in individual data sets, helps link widely separated areas of outcrop, and unifies disparate geologic studies. This booklet outlines the data processing and compilation procedures used to produce the magnetic anomaly database and map that accompany this booklet.

Special Map↗

Gene pool boundaries for the Yosemite toad (Anaxyrus canorus) reveal asymmetrical migration within meadow neighborhoods

The Yosemite toad ( Anaxyrus [ Bufo ] canorus ) is a federally threatened species of meadow-specializing amphibian endemic to the high-elevation Sierra Nevada Mountains of California. The species is one of the first amphibians to undergo a large demographic collapse that was well-documented, and is reputed to remain in low abundance throughout its range. Recent phylogeographic work has demonstrated that Pleistocene toad lineages diverged and then admixed to differing extents across an elevational gradient. Although lineage divisions may have significant effects on evolutionary trajectories over large spatial and temporal scales, present-day population dynamics must be delineated in order to manage and conserve the species effectively. In this study, we used a double-digest RADseq dataset to address three primary questions: (1) Are single meadows or neighborhoods of nearby meadows most correlated with population boundaries? (2) Does asymmetrical migration occur among neighborhoods of nearby meadows? (3) What topographic or hydrological variables predict such asymmetrical migration in these meadow neighborhoods? Hierarchical STRUCTURE and AMOVA analyses suggested that populations are typically circumscribed by a single meadow, although 84% of meadows exist in neighborhoods of at least two meadows connected by low levels of migration, and over half (53%) of neighborhoods examined display strong asymmetrical migration. Meadow neighborhoods often contain one or more large and flat “hub” meadows that experience net immigration, surrounded by smaller and topographically rugged “satellite” meadows with net emigration. Hubs tend to contain more genetic diversity and could be prioritized for conservation and habitat management and as potential sources for reestablishment efforts.

California↗

Water quality, hydrology, and simulated response to changes in phosphorus loading of Mercer Lake, Iron County, Wisconsin, with special emphasis on the effects of wastewater discharges

Mercer Lake is a relatively shallow drainage lake in north-central Wisconsin. The area near the lake has gone through many changes over the past century, including urbanization and industrial development. To try to improve the water quality of the lake, actions have been taken, such as removal of the lumber mill and diversion of all effluent from the sewage treatment plant away from the lake; however, it is uncertain how these actions have affected water quality. Mercer Lake area residents and authorities would like to continue to try to improve the water quality of the lake; however, they would like to place their efforts in the actions that will have the most beneficial effects. To provide a better understanding of the factors affecting the water quality of Mercer Lake, a detailed study of the lake and its watershed was conducted by the U.S. Geological Survey in collaboration with the Mercer Lake Association. The purposes of the study were to describe the water quality of the lake and the composition of its sediments; quantify the sources of water and phosphorus loading to the lake, including sources associated with wastewater discharges; and evaluate the effects of past and future changes in phosphorus inputs on the water quality of the lake using eutrophication models (models that simulate changes in phosphorus and algae concentrations and water clarity in the lake). Based on analyses of sediment cores and monitoring data collected from the lake, the water quality of Mercer Lake appears to have degraded as a result of the activities in its watershed over the past 100 years. The water quality appears to have improved, however, since a sewage treatment plant was constructed in 1965 and its effluent was routed away from the lake in 1995. Since 2000, when a more consistent monitoring program began, the water quality of the lake appears to have changed very little. During the two monitoring years (MY) 2008-09, the average summer near-surface concentration of total phosphorus was 0.023 mg/L, indicating the lake is borderline mesotrophic-eutrophic, or has moderate to high concentrations of phosphorus, whereas the average summer chlorophyll a concentration was 3.3 mg/L and water clarity, as measured with a Secchi depth, was 10.4 ft, both indicating mesotrophic conditions or that the lake has a moderate amount of algae and water clarity. Although actions have been taken to eliminate the wastewater discharges, the bottom sediment still has slightly elevated concentrations of several pollutants from wastewater discharges, lumber operations, and roadway drainage, and a few naturally occurring metals (such as iron). None of the concentrations, however, were high enough above the defined thresholds to be of concern. Based on nitrogen to phosphorus ratios, the productivity (algal growth) in Mercer Lake should typically be limited by phosphorus; therefore, understanding the phosphorus input to the lake is important when management efforts to improve or prevent degradation of the lake water quality are considered. Total inputs of phosphorus to Mercer Lake were directly estimated for MY 2008-09 at about 340 lb/yr and for a recent year with more typical hydrology at about 475 lb/yr. During these years, the largest sources of phosphorus were from Little Turtle Inlet, which contributed about 45 percent, and the drainage area near the lake containing the adjacent urban and residential developments, which contributed about 24 percent. Prior to 1965, when there was no sewage treatment plant and septic systems and other untreated systems contributed nutrients to the watershed, phosphorus loadings were estimated to be about 71 percent higher than during around 2009. In 1965, a sewage treatment plant was built, but its effluent was released in the downstream end of the lake. Depending on various assumptions on how much effluent was retained in the lake, phosphorus inputs from wastewater may have ranged from 0 to 342 lb. Future highway and stormwater improvements have been identified in the Mercer Infrastructure Improvement Project, and if they are done with the proposed best management practices, then phosphorus inputs to the lake may decrease by about 40 lb. Eutrophication models [Canfield and Bachman model (1981) and Carlson Trophic State Index equations (1977)] were used to predict how the water quality of Mercer Lake should respond to changes in phosphorus loading. A relatively linear response was found between phosphorus loading and phosphorus and chlorophyll a concentrations in the lake, with changes in phosphorus concentrations being slightly less (about 80 percent) and changes in chlorophyll a concentrations being slightly more (about 120 percent) than the changes in phosphorus loadings to the lake. Water clarity, indicated by Secchi depths, responded more to decreases in phosphorus loading than to increases in loading. Results from the eutrophication models indicated that the lake should have been negatively affected by the wastewater discharges. Prior to 1965, when there was no sewage treatment plant effluent and inputs from the septic systems and other untreated systems were thought to be high, the lake should have been eutrophic; near the surface, average phosphorus concentrations were almost 0.035 mg/L, chlorophyll a concentrations were about 7 μg/L, and Secchi depths were about 6 ft, which agreed with the shallower Secchi depths during this time estimated from the sediment-core analysis. The models indicated that between 1965 and 1995, when the lake retained some of the effluent from the new sewage treatment plant, water quality should have been between the conditions estimated prior to 1965 and what was expected during typical hydrologic conditions around MY 2008-09. The models also indicated that if the future Mercer Infrastructure Improvement Project is conducted with the best management practices as proposed, the water quality in the lake could improve slightly from that measured during 2006-10. Because of the small amount of phosphorus that is presently input into Mercer Lake any additional phosphorus added to the lake could degrade water quality; therefore, management actions can usefully focus on minimizing future phosphorus inputs. Phosphorus released from the sediments of a degraded lake often delays its response to decreases in external phosphorus loading, especially in shallow, frequently mixed systems. Mercer Lake, however, remains stratified throughout most of the summer, and phosphorus released from the sediments represents only about 6 percent, or a small fraction, of the total phosphorus load to the lake. Therefore, the phosphorus trapped in the sediments should minimally affect the long-term water quality of the lake and should not delay the response in its productivity to future changes in nutrient loading from its watershed.

Wisconsin↗

An integrated approach to modeling changes in land use, land cover, and disturbance and their impact on ecosystem carbon dynamics: a case study in the Sierra Nevada Mountains of California

Increased land-use intensity (e.g. clearing of forests for cultivation, urbanization), often results in the loss of ecosystem carbon storage, while changes in productivity resulting from climate change may either help offset or exacerbate losses. However, there are large uncertainties in how land and climate systems will evolve and interact to shape future ecosystem carbon dynamics. To address this we developed the Land Use and Carbon Scenario Simulator (LUCAS) to track changes in land use, land cover, land management, and disturbance, and their impact on ecosystem carbon storage and flux within a scenario-based framework. We have combined a state-and-transition simulation model (STSM) of land change with a stock and flow model of carbon dynamics. Land-change projections downscaled from the Intergovernmental Panel on Climate Change’s (IPCC) Special Report on Emission Scenarios (SRES) were used to drive changes within the STSM, while the Integrated Biosphere Simulator (IBIS) ecosystem model was used to derive input parameters for the carbon stock and flow model. The model was applied to the Sierra Nevada Mountains ecoregion in California, USA, a region prone to large wildfires and a forestry sector projected to intensify over the next century. Three scenario simulations were conducted, including a calibration scenario, a climate-change scenario, and an integrated climate- and land-change scenario. Based on results from the calibration scenario, the LUCAS age-structured carbon accounting model was able to accurately reproduce results obtained from the process-based biogeochemical model. Under the climate-only scenario, the ecoregion was projected to be a reliable net sink of carbon, however, when land use and disturbance were introduced, the ecoregion switched to become a net source. This research demonstrates how an integrated approach to carbon accounting can be used to evaluate various drivers of ecosystem carbon change in a robust, yet transparent modeling environment.

California↗

Temperature-dependent variations in mineralogy, major element chemistry and the stable isotopes of boron, lithium and chlorine resulting from hydration of rhyolite glass: Constraints from hydrothermal experiments at 150 to 350°C and 25 MPa

Rhyolite-hosted hydrothermal systems in the continental crust contain valuable energy and mineral resources that make them of special interest across several scientific disciplines. Despite extensive research on these systems, the temperature-dependence of chemical reactions between host rocks and aqueous-rich fluids and the mineralogical transformations resulting from these reactions are not well quantified. To expand our understanding of the controlling processes operating in these systems, we carried out seven laboratory experiments in which rhyolite was reacted with deionized water at 150 °C to 350 °C and 25 MPa. An additional experiment at 200 °C was carried out to examine the effect of dissolved CO 2 on the reactions. The overarching goal of this experimental study was to provide new insights on the temperature-dependence of water-rock interaction in continental hydrothermal systems. We applied a wide range of chemical, isotopic and mineralogical methods to analyze the reacted rhyolite and waters, and the major observations are: (1) the rhyolite progressively hydrates with increasing temperature between 150 °C to a maximum of 8.2 wt% H 2 O at 275 °C; hydration then decreases until 350 °C in conjunction with the destruction of the rhyolite glass and crystallization of secondary mineral phases; (2) the ratio of molecular water (H 2 O m ) to hydroxyl (OH − ) of the water that is dissolved in the reacted rhyolite decreases from ∼7 at 150 °C to ∼4 at 250 °C; (3) the main secondary minerals formed are the zeolite ferrierite (T ≥ 275 °C); biotite, albite and cristobalite mainly form at higher experimental temperatures (T ≥ 300 °C); (4) the reacted waters are nearly saturated with respect to amorphous silica; (5) at temperatures ≥ 275 °C nearly all the chlorine is leached into solution; (6) fluorine leaching from the rhyolite gradually increases between 150 °C and 250 °C, but then gradually decreases at higher temperatures and is incorporated into a secondary mineral phase; (7) dissolved CO 2 in the water enhances alkali metal cation leaching from the rhyolite; and (8) calculated Na-K and silica geothermometer temperatures differ from the experimental temperatures by varying amounts. In addition, apart from some small lithium isotope fractionation at temperatures ≤ 250 °C, the stable isotopes of boron, lithium and chlorine do not fractionate during rhyolite-water reactions, and the stable isotope compositions of these species in the reacted water are similar to those in the reactant rhyolite. These results provide new insights for a broad range of applications, including quantifying processes involving rhyolite glass hydration (obsidian hydration dating, perlite formation and discriminating secondary from magmatic water in rhyolitic matrix-glass of volcanic pyroclasts), for geothermal energy and mineral deposit exploration and for monitoring volcanoes.

Geochimica et Cosmochimica Acta↗

Special topic—Eruption plumes and clouds

Introduction Explosive eruptions create plumes of volcanic ash and gas that can rise more than 30,000 feet (9.1 kilometers [km]) above sea level within minutes of eruption onset. The resulting clouds disperse under prevailing winds and may cause hazardous conditions hundreds to thousands of kilometers from the volcano, including in international airspace. Rapid detection and characterization of explosive activity is vital to mitigate the wide-ranging effects of volcanic ash. Ashfall thicknesses as small as a millimeter or so on the ground can affect infrastructure, agriculture, and air quality, requiring extensive clean-up procedures (Schuster, 1981; Warrick and others, 1981, U.S. Geological Survey, 2022). Volcanic clouds also pose substantial threats to aircraft. Since 1953, 88 encounters between airplanes and ash clouds have been documented worldwide (International Civil Aviation Organization, 2015, appendix F), resulting in aircraft damage and, in 9 cases, engine failure (Guffanti and others, 2010). In 1982, two large passenger planes suffered complete engine failure owing to eruptions in Indonesia (Global Volcanism Program, 1982) and a similar incident occurred over Alaska in 1989 (Casadevall, 1994). In all three cases, they were able to restart some engine capability and land safely once they emerged from the ash clouds, although with substantial damage (Guffanti and others, 2010). The clear threat to aviation has led to establishment of nine Volcanic Ash Advisory Centers (VAAC) around the world to monitor and rapidly disseminate information about volcanic eruptions to the aviation community. U.S. Geological Survey (USGS) volcano observatories issue the Volcano Observatory Notice for Aviation that informs of preeruptive unrest or eruptive activity. When ash-producing eruptions do occur, volcano observatories work closely with their regional VAAC to ensure consistency and accuracy in eruption onset time, cloud altitude, ash production, and duration as reported in Volcanic Ash Advisories. Explosive volcanism in the United States and Commonwealth of the Northern Mariana Islands prompts 50–100 such advisories in any given year (table J1). This collaborative effort is greatly aided by USGS detection and monitoring of eruption clouds to ensure a timely and coordinated response. To support these efforts to provide guidance on ash transport and fallout, the USGS developed the Ash3d volcanic ash dispersion model ( https://vsc-ash.wr.usgs.gov/ash3d-gui ) (Schwaiger and others, 2012). Automated simulations are run daily by the USGS for volcanoes that are in elevated states of unrest, and in response mode when eruptions occur. During eruptions, the model output is provided to local National Weather Service Weather Forecast Offices to guide them in the issuance of their information products (such as special weather statements, ashfall advisories, or ashfall warnings), as well as to State and local governments and the public. Characterization of the eruption source is needed to estimate the parameters used to initialize the Ash3d model, and by the Anchorage and Washington VAACs to initialize other dispersion models that inform forecasts for the airborne volcanic cloud. The source parameters that can be provided by observation during an eruption include eruption start time, eruption cloud height over time, and eruption duration. Other, nonobservable source parameters, such as mass eruption rate and grain-size distribution, are based on empirical correlations and study of historical deposits. The goal is to provide a time series of cloud heights, mass eruption rates, and particle-size distributions that accurately reflects current conditions. When feasible, the USGS also provides guidance on the nature of ongoing eruptions and forecasts future activity using petrologic monitoring of collected tephra samples. The aims of providing accurate observable parameters are achieved through analysis of (1) near-real-time meteorological satellite data, (2) ground-based cameras (see of Flinders, A.F., Lowenstern, J.B., Coombs, M.L., and Poland, M.P., eds., Recommended capabilities and instrumentation for volcano monitoring in the United States: U.S. Geological Survey Scientific Investigations Report 2024–5062–G, 11 p., https://doi.org/10.3133/sir20245062g.">chapter G , this volume; Orr and others, 2024), (3) weather radar, (4) volcanic lightning detection, and (5) ground-based ash sensors and sampling. Explosive eruptions can be detected by a variety of geophysical monitoring, including infrasound (see of Flinders, A.F., Lowenstern, J.B., Coombs, M.L., and Poland, M.P., eds., Recommended capabilities and instrumentation for volcano monitoring in the United States: U.S. Geological Survey Scientific Investigations Report 2024–5062–C, 11 p., https://doi.org/10.3133/sir20245062c.">chapter C , this volume; Lyons and others, 2024) and seismicity (see of Flinders, A.F., Lowenstern, J.B., Coombs, M.L., and Poland, M.P., eds., Recommended capabilities and instrumentation for volcano monitoring in the United States: U.S. Geological Survey Scientific Investigations Report 2024–5062–B, 9 p., https://doi.org/10.3133/sir20245062b.">chapter B , this volume; Thelen and others, 2024). However, those methods cannot quantify the altitude, ash content, and dispersal dynamics of resulting volcanic clouds. Ideally, all available sources of monitoring data are synthesized to develop a coherent understanding of eruptive activity. The guidance summarized here provides a framework for characterizing volcanic clouds in the atmosphere and tracking the evolution of explosive eruption dynamics.

Scientific Investigations Report↗

Water Quality and Hydrology of Silver Lake, Barron County, Wisconsin, With Special Emphasis on Responses of a Terminal Lake to Changes in Phosphorus Loading and Water Level

Silver Lake is typically an oligotrophic-to-mesotrophic, soft-water, terminal lake in northwestern Wisconsin. A terminal lake is a closed-basin lake with surface-water inflows but no surface-water outflows to other water bodies. After several years with above-normal precipitation, very high water levels caused flooding of several buildings near the lake and erosion of soil around much of the shoreline, which has been associated with a degradation in water quality (increased phosphorus and chlorophyll a concentrations and decreased water clarity). To gain a better understanding of what caused the very high water levels and degradation in water quality and collect information to better understand the lake and protect it from future degradation, the U.S. Geological Survey did a detailed study from 2004 to 2008. This report describes results of the study; specifically, lake-water quality, historical changes in water level, water and phosphorus budgets for the two years monitored in the study, results of model simulations that demonstrate how changes in phosphorus inputs affect lake-water quality, and the relative importance of changes in hydrology and changes in the watershed to the water quality of the lake. From 1987 to about 1996, water quality in Silver Lake was relatively stable. Since 1996, however, summer average total phosphorus concentrations increased from about 0.008 milligrams per liter (mg/L) to 0.018 mg/L in 2003, before decreasing to 0.011 mg/L in 2008. From 1996 to 2003, Secchi depths decreased from about 14 to 7.4 feet, before increasing to about 19 feet in 2008. Therefore, Silver Lake is typically classified as oligotrophic to mesotrophic; however, during 2002-4, the lake was classified as mesotrophic to eutrophic. Because productivity in Silver Lake is limited by phosphorus, phosphorus budgets for the lake were constructed for monitoring years 2005 and 2006. The average annual input of phosphorus was 216 pounds: 78 percent from tributary and nearshore runoff and 22 percent from atmospheric deposition. Because Silver Lake is hydraulically mounded above the local groundwater system, little or no input of phosphorus to the lake is from groundwater and septic systems. Silver Lake had previously been incorrectly described as a groundwater flowthrough lake. Phosphorus budgets were constructed for a series of dry years (low water levels) and a series of wet years (high water levels). About 6 times more phosphorus was input to the lake during wet years with high water levels than during the dry years. Phosphorus from erosion represented 13-20 percent of the phosphorus input during years with very high water levels. Results from the Canfield and Bachman eutrophication model and Carlson trophic state index equations demonstrated that water quality in Silver Lake directly responds to changes in external phosphorus input, with the percent change in chlorophyll a being about 80 percent of the percent change in total phosphorus input and the change in Secchi depth and total phosphorus concentrations being about 40 and 50 percent of the percent change in input, respectively. Therefore, changes in phosphorus input should impact water quality. Specific scenarios were simulated with the models to describe the effects of natural (climate-driven) and anthropogenic (human-induced) changes. Results of these scenarios demonstrated that several years of above-normal precipitation cause sustained high water levels and a degradation in water quality, part of which is due to erosion of the shoreline. Results also demonstrated that 1) changes in tributary and nearshore runoff have a dramatic effect on lake-water quality, 2) diverting water into the lake to increase the water level is expected to degrade the water quality, and 3) removal of water to decrease the water level of the lake is expected to have little effect on water quality. Fluctuations in water levels since 1967, when records began for the lake, are representative

Scientific Investigations Report↗

U.S. Geological Survey Core Research Center: A gateway to subsurface discovery for geoscience research

The U.S. Geological Survey (USGS) operates the Core Research Center (CRC) in Denver, Colorado, USA, a public access repository of rock cores from over 9800 wells and drill cuttings from over 53 000 wells, primarily from states in or adjacent to the Rocky Mountain Region. Annually, approximately 1400 visitors use the collection for traditional and innovative research. The CRC has an online, searchable database which includes downloadable core photos, analytical data, and thin-section images. When visitors sample for analyses, the results must be returned to the CRC for public dissemination providing immediate, free access to users while sparing the finite, irreplaceable collection from redundant testing. A representative quantity of every core depth is preserved in perpetuity. Studies on CRC materials, paired with new extraction methods, have unlocked new productive deposits. Materials drilled and curated decades ago remain in high demand while materials receiving little attention today may be crucial for future research. The collection provides immediate, inexpensive access to subsurface materials at a fraction of the cost of new drilling, sparing money, time and environmental impacts.

Geological Society, London, Special Publications↗

Theory, construction and operation of simple tensiometers

The tensiometer, introduced by Richards and Gardner (1936) has been a tool often ignored in unsaturated zone investigations. Hazardous waste disposal studies that require values of unsaturated zone matric potentials will expand tensiometer use. Familiarity with operation and installation principles is necessary to ensure quality data collection. The essential elements of a tensiometer are a porous cup connected with tubing to a vacuum gauge; all are filled with water. When the porous cup is buried in unsaturated soil, the soil draws water through the cup wall, until the water tension inside the cup equals the surrounding soil-water tension. The tension is transmitted through the water filled tube to an accessible vacuum gauge (manometer or transducer) and is recorded manually or automatically. Although specialized tensiometers exist, the tensiometer presented here in detail is suited to diverse on-site applications. Constructed from readily available, inexpensive parts, it can measure as much as 0.85 bar of tension. Design features include a flushing system for removal of entrapped air or mercury, and an easily maintained modular network of nylon manometers and water-supply tubes. Good hydraulic connection between porous cup and soil and meticulous backfill procedures are necessary for accurate measurement of representative matric potentials. Proper and consistent use of tensiometers should yield reliable values of matric potentials, and lead to a better understanding of unsaturated zone processes.

Groundwater Monitoring and Remediation↗

Lake Michigan Diversion Accounting land cover change estimation by use of the National Land Cover Dataset and raingage network partitioning analysis

The U.S. Army Corps of Engineers (USACE), Chicago District, is responsible for monitoring and computation of the quantity of Lake Michigan water diverted by the State of Illinois. As part of this effort, the USACE uses the Hydrological Simulation Program–FORTRAN (HSPF) with measured meteorological data inputs to estimate runoff from the Lake Michigan diversion special contributing areas (SCAs), the North Branch Chicago River above Niles and the Little Calumet River above South Holland gaged basins, and the Lower Des Plaines and the Calumet ungaged that historically drained to Lake Michigan. These simulated runoffs are used for estimating the total runoff component from the diverted Lake Michigan watershed, which is accountable to the total diversion by the State of Illinois. The runoff is simulated from three interpreted land cover types in the HSPF models: impervious, grass, and forest. The three land cover data types currently in use were derived from aerial photographs acquired in the early 1990s. This study used the National Land Cover Dataset (NLCD) and developed an automated process for determining the area of the three land cover types, thereby allowing faster updating of future models, and for evaluating land cover changes by use of historical NLCD datasets. The study also carried out a raingage partitioning analysis so that the segmentation of land cover and rainfall in each modeled unit is directly applicable to the HSPF modeling. Historical and existing impervious, grass, and forest land acreages partitioned by percentages covered by two sets of raingages for the Lake Michigan diversion SCAs, gaged basins, and ungaged basins are presented.

Illinois↗

A preliminary report of the geohydrology of the Mississippi salt-dome basin

The U.S. Department of Energy is investigating the suitability of salt domes in the Mississippi salt-dome basin as repositories for storing radioactive wastes. The Department of Energy has requested that the U.S. Geological Survey describe the groundwater hydrology of the Mississippi salt-dome basin, giving special attention to direction and rate of movement of water. In this first part of a continuing investigation the data obtained from one year of extensive literature search and data compilation are summarized. The regional groundwater hydrology in the salt-dome basin is defined with respect to (1) groundwater flow, (2) facies changes, (3) geological structure, (4) recharge and discharge, (5) freshwater-saltwater relations, and (6) identification of localities where additional data are needed. From the 50 piercement-type salt domes in the Mississippi salt-dome basin three domes (Richton, Cypress Creek, and Lampton) were selected for more intensive study. To further evaluate the geohydrology of Richton, Lampton, and Cypress Creek domes as possible sites for storage of radioactive waste, an intensive geohydrologic study based on a comprehensive test drilling program near the domes is planned. (USGS)

Mississippi↗

USGS Environmental health science strategy: providing environmental health science for a changing world: Public review release

America has an abundance of natural resources. We have bountiful clean water, fertile soil, and unrivaled national parks, wildlife refuges, and public lands. These resources enrich our lives and preserve our health and wellbeing. These resources have been maintained because of our history of respect for their value and an enduring commitment to their vigilant protection. Awareness of the social, economic, and personal value of the health of our environment is increasing. The emergence of environmentally driven diseases caused by environmental exposure to contaminants and pathogens is a growing concern worldwide. New health threats and patterns of established threats are affected by both natural and anthropogenic changes to the environment. Human activities are key drivers of emerging (new and re-emerging) health threats. Societal demands for land and natural resources, a better quality of life, improved economic prosperity, and the environmental impacts associated with these demands will continue to increase. Natural earth processes, climate trends, and related climatic events will add to the environmental impact of human activities. These environmental drivers will influence exposure to disease agents, including viral, bacterial, prion, and fungal pathogens, parasites, natural earth materials, toxins and other biogenic compounds, and synthetic chemicals and substances. The U.S. Geological Survey (USGS) defines environmental health science broadly as the interdisciplinary study of relations among the quality of the physical environment, the health of the living environment, and human health. The interactions among these three spheres are driven by human activities, ecological processes, and natural earth processes; the interactions affect exposure to contaminants and pathogens and the severity of environmentally driven diseases in animals and people. This definition provides USGS with a framework for synthesizing natural science information from across the Bureau and providing it to environmental, natural resource, agricultural, and public-health managers. The USGS is a Federal science agency with a broad range of natural science expertise relevant to environmental health. USGS provides scientific information and tools as a scientific basis for management and policy decision making. USGS specializes in science at the environment-health interface, by characterizing the processes that affect the interaction among the physical environment, the living environment, and people, and the resulting factors that affect ecological and human exposure to disease agents. This report describes a 10-year strategy that encompasses the portfolio of USGS environmental health science. It summarizes national environmental health priorities that USGS is best suited to address, and will serve as a strategic framework for USGS environmental health science goals, actions, and outcomes for the next decade. Implementation of this strategy is intended to aid coordination of USGS environmental health activities and to provide a focal point for disseminating information to stakeholders. The "One Health" paradigm advocated by the World Health Organization (WHO, 2011), and the American Veterinary Medicine Association (AVMA, 2008), among others, is based on a general recognition that the health of humans, animals, and the environment are inextricably linked. Thus, successful efforts to protect that health will require increased interdisciplinary research and increased communication and collaboration among the broader scientific and health community. This strategy is built upon that paradigm. The vision, mission, and five cornerstone goals of the USGS Environmental Health Science Strategy were developed with significant input from a wide range of stakeholders. Vision - The USGS is a premier source of the environmental health science needed to safeguard the health of the environment, fish, wildlife, and people. Mission - The mission of USGS in environmental health science is to contribute scientific information to environmental, natural resource, agricultural, and public-health managers, who use that science to support sound decision making. USGS provides the science to: - Goal 1: Identify, prioritize, and detect contaminants and pathogens of emerging environmental concern. - Goal 2: Reduce the impact of contaminants on the environment, fish, wildlife, and people. - Goal 3: Reduce the impact of pathogens on the environment, fish, wildlife, and people. - Goal 4: Discover the complex interactions and combined effects of exposure to contaminants and pathogens. - Goal 5: Prepare for and respond to environmental impacts and related health threats of natural and anthropogenic disasters. Goals 1 through 4 are intended to provide science to address environmental health threats in a logical order, from informing prevention and preparedness, to supporting systematic management response to environmental health issues. Goal 4 addresses the interaction among contaminants and pathogens, an issue of emerging concern in environmental health science. Goal 5 acknowledges the fact that natural and anthropogenic disasters can cause immediate and prolonged adverse environmental health threats. This strategy proposes that USGS take the following strategic science actions to achieve each of the five goals of this strategy: Goal 1: Identify, prioritize, and detect contaminants and pathogens of emerging environmental concern. - Strategic Science Action 1. - Prioritize contaminants and pathogens of emerging concern to guide research, detection, and management activities. - Strategic Science Action 2. - Conduct surveillance and monitoring to provide early warning of emerging health threats. - Strategic Science Action 3. - Develop approaches and tools that identify vulnerable environmental settings, ecosystems, and species. Goal 2: Reduce the impact of contaminants on the environment, fish, wildlife, and people. - Strategic Science Action 1. - Systematically characterize the sources, occurrence, transport and fate of environmental contaminants to guide efforts to manage and mitigate contamination. - Strategic Science Action 2. - Evaluate the threats of contamination on the health of the environment, fish, wildlife, and people, and inform the associated management and protection efforts. - Strategic Science Action 3. - Characterize potential human exposure to support establishment of health-based standards or guidelines and contamination-reduction efforts. Goal 3: Reduce the impact of pathogens on the environment, fish, wildlife, and people. - Strategic Science Action 1. - Determine the biotic and abiotic factors that control the ecology of infectious diseases affecting natural populations of aquatic and terrestrial species and potential transmission to other animals and humans. - Strategic Science Action 2. - Establish how natural and anthropogenic environmental changes affect the distribution and severity of infectious diseases in natural populations of aquatic and terrestrial species and potential transmission to other animals and humans. - Strategic Science Action 3. - Develop surveillance systems to identify changing patterns of disease activity in priority geographic areas. Goal 4: Discover the complex interactions and combined effects of exposure to contaminants and pathogens. - Strategic Science Action 1. - Identify how exposure to one class of disease agents (contaminants or pathogens) can make an organism more susceptible to effects from exposure to the other class of disease agents. - Strategic Science Action 2. - Implement interdisciplinary studies that characterize the effects of combined exposure to pathogens and contaminants. Goal 5: Prepare for and respond to the environmental impacts and related health threats of natural and anthropogenic disasters. - Strategic Science Action 1. - Establish a formal interdisciplinary science capability to rapidly assess the environmental health risks associated with disasters. - Strategic Science Action 2. - Enhance methods to anticipate, prepare for, and identify environmental, ecological, and related health impacts of future disasters. This strategy is one of seven USGS science strategies developed concurrently: - Climate and Land Use Change - Core Science Systems - Ecosystems - Energy and Mineral Resources - Environmental Health - Natural Hazards - Water. This strategy describes how USGS will address the highest priority environmental health issues facing the Nation. The ultimate intended outcome of this science strategy is prevention and reduction of adverse impacts to the quality of the environment, the health of our living resources, and human health. Communication with, and receiving input from, partners and stakeholders regarding their science needs is essential for successful implementation of this strategy. It is incumbent on USGS to reach out to all stakeholders to ensure that USGS efforts are focused on the highest priority environmental health issues and that products are provided in the most timely and usable form to all those who can use them. USGS must reach out to the scientific community, internally and externally, to ensure that our efforts are integrated with and take full advantage of the activities of others.

Open-File Report↗

Evolution of the Creede Caldera and its relation to mineralization in the Creede mining district, Colorado

At 25 Ma a major epithermal silver and base metal deposit formed in rhyolitic welded tuff near Creede, Colorado. Nearly 24000 metric tons of silver, appreciable lead, and small amounts of zinc, copper, and gold, have been produced from large, crustified veins under Bachelor and Bulldog Mountains north and northwest of Creede. Prior geologic, hydrologic, and stable-isotope studies showed that ore deposition was associated with the mixing and boiling of waters from diverse sources and suggester that a critical part of the ore-forming fluid may have originated within the ancient lake and sediments of the lacustrine Creede Formation that filled the Creede caldera. Two drill holes that sampled the heretofore hidden lower half of the Creede Formation are the focus of this book. The Creede caldera formed at 26.9 Ma within a high constructional plateau of silicic ashflows that covered and were sporadically interlayed with, intermediate lavas and lahars from large stratovolcanoes. The Creede caldera lake had an inflow evaporation balance that did not permit rapid filling to create a brim-full deep lake. Thus salts were evaporatively concentrated; but, with the exception of possible gypsum, no evaporite minerals preserved. Cool springs deposited travertine as mounds and contributed to limestone interlaminations within the sediment. The lake bottom was anoxic, and bacterial reduction of sulfate led to extreme sulfur isotopic fractionation in diagenetic pyrite. The caldera gradually resurged, converting the initial equant lake into an arcuate moat. Resurgent doming, alluvial fans, lacustrine sediments, ashfalls, and lava domes displaced water, lifted the lake so that it overlapped what later became the southern edge of the mineralized are, and eventually filled the basin. At 25.1 Ma an unseen pluton intruded beneath the northen part of the Creede district and created a convecting olume that drew in brine from the Creede caldera fill, meteotic water from highlands to the north, and possibly a fluid carrying radiogenic lead. These waters mixed and boiled as they approached the surface and moved southward, deposited a zoned epithermal deposit a few hundred meters below the paleosurface, and finally discharged into the top of the Creede Formation. The sulfide in the ores was the igneous derivation, but the sulfate was a mixture of biogenic sulfur from the Creede Formation, oxidized igneous sulfide, and thermochemically reduced and partially oxygen exchanged sulfate. The studies of the Creede caldera provide key observational and conceptual elements for the generalized model of the Creede ore deposit. The relation of the Creed ore deposit to a brine reservoir has broad significance because other brine accumulations (as in the Great Basin, the Green River Basin, or the playas of the Altiplano offer similar setting and exploration opportunities.

Colorado↗

Multiple stressor effects in relation to declining amphibian populations

Original research discusses the protocols and approaches to studying the effects of multiple environmental stressors on amphibian populations and gives new perspectives on this complicated subject. This new publication integrates a variety of stressors that can act in concert and may ultimately cause a decline in amphibian populations. Sixteen peer-reviewed papers cover: Toxicity Assessment examines methods, which range from long-established laboratory approaches for evaluating adverse chemical effects to amphibians, to methods that link chemicals in surface waters, sediments, and soils with adverse effects observed among amphibians in the field. Field and Laboratory Studies illustrates studies in the evaluation of multiple stressor effects that may lead to declining amphibian populations. A range of laboratory and field studies of chemicals, such as herbicides, insecticides, chlorinated organic compounds, metals, and complex mixtures are also included. Causal Analysis demonstrates the range of tools currently available for evaluating "cause-effect" relationships between environmental stressors and declining amphibian populations. Audience: This new publication is a must-have for scientists and resource management professionals from diverse fields, including ecotoxicology, chemistry, ecology, field biology, conservation biology, and natural resource management.

Special Technical Report↗

Concentration and retention of Toxoplasma gondii surrogates from seawater by red abalone (Haliotis rufescens)

Small marine snails and abalone have been identified as high- and low-risk prey items, respectively, for exposure of threatened southern sea otters to Toxoplasma gondii , a zoonotic parasite that can cause fatal encephalitis in animals and humans. While recent work has characterized snails as paratenic hosts for T. gondii , the ability of abalone to vector the parasite has not been evaluated. To further elucidate why abalone predation may be protective against T. gondii exposure, this study aimed to determine whether: (1) abalone are physiologically capable of acquiring T. gondii ; and (2) abalone and snails differ in their ability to concentrate and retain the parasite. Abalone were exposed to T. gondii surrogate microspheres for 24 h, and fecal samples were examined for 2 weeks following exposure. Concentration of surrogates was 2–3 orders of magnitude greater in abalone feces than in the spiked seawater, and excretion of surrogates continued for 14 days post-exposure. These results indicate that, physiologically, abalone and snails can equally vector T. gondii as paratenic hosts. Reduced risk of T. gondii infection in abalone-specializing otters may therefore result from abalone's high nutritional value, which implies otters must consume fewer animals to meet their caloric needs.

Parasitology↗

Advanced and applied remote sensing of environmental conditions

"Remote sensing” is a general term for monitoring techniques that collect information without being in physical contact with the object of study. Overhead imagery from aircraft and satellite sensors provides the most common form of remotely sensed data and records the interaction of electromagnetic energy (usually visible light) with matter, such as the Earth’s surface. Remotely sensed data are fundamental to geographic science. The U.S. Geological Survey’s (USGS) Eastern Geographic Science Center (EGSC) is currently conducting and promoting the research and development of several different aspects of remote sensing science in both the laboratory and from overhead instruments. Spectroscopy is the science of recording interactions of energy and matter and is the bench science for all remote sensing. Visible and infrared analysis in the laboratory with special instruments called spectrometers enables the transfer of this research from the laboratory to multispectral (5–15 broad bands) and hyperspectral (50–300 narrow contiguous bands) analyses from aircraft and satellite sensors. In addition, mid-wave (3–5 micrometers, µm) and long-wave (8–14 µm) infrared data analysis, such as attenuated total reflectance (ATR) spectral analysis, are also conducted. ATR is a special form of vibrational infrared spectroscopy that has many applications in chemistry and biology but has recently been shown to be especially diagnostic for vegetation analysis.

Fact Sheet↗

Economic geology of the Bingham mining district, Utah

The field work of which this report represents the final results was first undertaken in the summer of the year 1900. This district had long been selected by the writer as worthy of special economic investigation, as well on account of the importance of its products as because of its geological structure and the peculiar relations of its ore deposits. It was not, however, until the summer mentioned above that the means at the disposal of the Survey, both pecuniary and scientific, justified its undertaking. As originally planned, the areal or surface geology was to have been worked out by Mr. Keith, who had already spent many years in unraveling the complicated geological structure of the Appalachian province, while Mr. Boutwell, who had more recently become attached to the Survey, was to have charge of the underground geology, or a study of the ore deposits, under the immediate supervision of the writer. When the time came for actually taking the field, it was found that the pressure of other work would not permit Mr. Keith to carry out fully the part allotted to him, and in consequence a part of his field work has fallen to Mr. Boutwell. Field work was commenced by the writer and Mr. Boutwell early in July, 1900. Mr. Keith joined the party on August 10, but was obliged to leave for other duties early in September. Mr. Boutwell carried on his field work continuously from July until December, taking up underground work after the snowfall had rendered work on the surface geology impracticable. The geological structure had proved to be unexpectedly intricate and complicated, so that, on the opening of the field season of 1901, it was found necessary to make further study in the light of results already worked out, and Mr. Boutwell spent some weeks in the district in the early summer of 1901. His field work that year, partly in California and partly in Arizona, as assistant to Mr. Waldemar Lindgren, lasted through the summer and winter and well into the spring of 1902, so that but little time , was left before he was obliged to take the field again in his study of the Park City district of Utah. Mr. Keith had been too closely occupied with his Appalachian work to complete his part,' and thus the publication of this report has been unusually delayed. While the delay is a cause for regret, this regret is much tempered by the consideration that had the report been published earlier many facts brought to light during the vigorous development of the region in late years, which have an important bearing upon the structure and genesis of the ore deposits, could not have been used in its preparation.

Utah↗