Biological impacts of minor shoreline structures on the coastal environment: state-of-the-art review. Vol. I, 156 pp. Vol. II,
Explore the source record for details and available documents.
FWS/OBS↗
SEARCH · Geology Reports
Results for “Biological Report”
Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.
Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.
Water-quality, bed-sediment, and biological data (October 2012 through September 2013) and statistical summaries of data for streams in the Clark Fork Basin, Montana
Water, bed sediment, and biota were sampled in streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency to characterize aquatic resources in the Clark Fork Basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2012 through September 2013. Bed-sediment and biota samples were collected once at 13 sites during August 2013. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2012 through September 2013. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. Turbidity and dissolved organic carbon were analyzed for water samples collected at the four sites where seasonal daily values of turbidity were being determined. Daily values of mean suspended-sediment concentration and suspended-sediment discharge were determined for four sites. Bed-sediment data include trace-element concentrations in the fine-grained fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical sum-maries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork Basin are provided for the period of record.
Montana↗
Climate variation and its effects on our land and water : Part C, Geological Survey climate plan
To better coordinate information being generated by the U.S. Geological Survey, a workshop was convened near Denver, Colo., on December 7-9, 1976, to exchange ideas about research that is oriented toward climate, climate variation, and the effects of climate on the Nation 's land and water resources. This is the first circular of a three-part report resulting from that workshop. Hydrologic records provide information to the earth scientist about the responses of ground water, surface water, and glaciers to climatic change; geologic sequences provide evidence of earth-surface water, and glaciers to climatic change; geologic sequences provide evidence of earth-surface responses to climatic change; biological records yield information about the effects of climatic change on the Earth 's biota; archeological records tell us where and how man was able to live under changing climatic conditions; and historical records allow the specific effects of short-term changes in climate to be accurately documented. The interrelation between present and past geologic environments, various methods of study , and the span of time over which the results can be applied are shown in a table. (Woodard-USGS)
Circular↗
Monitoring amphibians in Great Smoky Mountains National Park
Amphibian species have inexplicably declined or disappeared in many regions of the world, and in some instances, serious malformations have been observed. In the United States, amphibian declines frequently have occurred even in protected areas. Causes for the declines and malformations probably are varied and may not even be related. The seemingly sudden declines in widely separated areas, however, suggests a need to monitor amphibian populations as well as identify the causes when declines or malformations are discovered. In 2000, the President of the United States and Congress directed Department of the Interior (DOI) agencies to develop a plan to monitor the trends in amphibian populations on DOI lands and to conduct causes of declines. The DOI has stewardship responsibilities over vast land holdings in the United States, much of it occupied by, or potential habitat for, amphibians. The U.S. Geological Survey (USGS) was given lead responsibility for planning and organizing this program, named the Amphibian Research and Monitoring Initiative (ARMI). Authorization carried the mandate to set up a national amphibian monitoring program on Federal lands, to develop the sampling techniques and biometrical analyses necessary to determine status and trends, and to identify possible causes of amphibian declines and malformations. The biological importance of Great Smoky Mountains National Park has been recognized by its designation as an International Biosphere Reserve. As such, it is clearly the leading region of significance for amphibian research. Although no other region shares the wealth of amphibians as found in the Great Smokies (31 species of salamanders, and 13 of frogs), the entire southern and mid-section of the Appalachian Mountain chain is characterized by a high diversity of amphibians, and inventories and monitoring protocols developed in the Smokies likely will be applicable to other Appalachian National Park Service properties. From 1998 to 2001, USGS biologists carried out a pilot inventory and monitoring research project in Great Smoky Mountains National Park. A variety of inventory, sampling, and monitoring techniques were employed and tested. These included wide-scale visual encounter surveys of amphibians at terrestrial and aquatic sites, intensive monitoring of selected plots, randomly placed small-grid plot sampling, litterbag sampling in streams, monitoring nesting females of selected species, call surveys, and monitoring specialized habitats, such as caves. Coupled with information derived from amphibian surveys on Federal lands using various other techniques (automated frog call data loggers, PVC pipes, drift fences, terrestrial and aquatic traps), an amphibian monitoring program was designed to best meet the needs of biologists and natural resource managers after taking into consideration the logistics, terrain, and life histories of the species found within Great Smoky Mountains National Park. This report provides an overview of the Park’s amphibians, the factors affecting their distribution, a review of important areas of biodiversity, and a summary of amphibian life history in the Southern Appalachians. In addition, survey techniques are described as well as examples of how the techniques are set up, a critique of what the results tell the observer, and a discussion of the limitations of the techniques and the data. The report reviews considerations for site selection, outlines steps for biosecurity and for processing diseased or dying animals, and provides resource managers with a decision tree on how to monitor the Park’s amphibians based on different levels of available resources. It concludes with an extensive list of references for inventorying and monitoring amphibians. USGS and Great Smoky Mountains National Park biologists need to establish cooperative efforts and training to ensure that congressionally mandated amphibian surveys are performed in a statistically rigorous and biologically meaningful manner, and that amphibian populations on Federal lands are monitored to ensure their long-term survival. The research detailed in this report will aid these cooperative efforts.
North Carolina, Tennessee↗
Bighorn sheep ( Ovis canadensis ) survivorship and habitat studies in Bighorn Canyon National Recreation Area and surrounding lands, Wyoming and Montana, 2000–2003
In the 1850s, bighorn sheep (Ovis canadensis) were numerous and distributed throughout the Bighorn and Pryor Mountains of Montana and Wyoming. After European settlement, bighorn sheep populations declined, and local extinctions occurred in much of their historic range in the western United States. The current bighorn sheep population of Bighorn Canyon National Recreation Area (BICA) is the product of several reintroductions into BICA and surrounding lands. Following a release in 1973 and growth rates near maximum potential of 19.8% per year, the population grew to an estimated peak population of about 211 animals in 1993 and 1994 (Kissell and others, 1996). Recent counts indicate the bighorn sheep population has declined. Kissell and others (1996) reported that the population began to decline rapidly in 1995 and 1996. He noted low ewe:lamb ratios during the decline phase. Bighorn sheep numbers declined to the lowest minimum viable population size of 100 animals recommended by several bighorn sheep experts (Bailey, 1990; Berger, 1990; Smith and others, 1991). National Park Service (NPS) and Bureau of Land Management (BLM) managers were concerned about the decline and requested a study of its causes. In 2000, the U.S. Geological Survey- Biological Resources Division (USGS-BRD) received funding to start a 3-year study of survivorship, condition, and population growth rate of the BICA bighorn sheep population. Several possibilities exist for the bighorn sheep decline. The herd may have experienced a rapid population expansion, followed by a decline to stability at a lower long-term carrying capacity. This pattern of apparently overshooting carrying capacity following an initial release has been reported for a number of ungulates (Caughley, 1976). Disease may have caused the decline; predation and/or competition with wild horses (Equus caballus) may also have been factors. A spatial model of wild horse carrying capacity (Coughenour, 1999) was developed to assist managers in evaluating wild horse population numbers. Studies of summer consumption rates by wild horses and other ungulates were conducted by James Detling and students from Colorado State University (Peterson and others, 1997; Gerhardt and Detling, 1998; Fahnestock, 1998). Diets and habitat use of wild horses, bighorn sheep and mule deer were studied by Coates and Schemnitz (1989) and Kissell and others (1996). Both Coates and Schemnitz (1989) and Kissell and others (1996) reported a high degree of dietary overlap between wild horses and bighorn sheep. However, Kissell and others (1996) concluded that a high degree of spatial separation between wild horses and bighorn sheep, at least under the study conditions, precluded any significant negative competitive influences. The most important overlap of bighorn sheep and wild horses seems to be on winter range. Competition can be difficult to determine, since current conditions may not reveal competition that has already occurred. Managers remained concerned about the declining bighorn population for the following reasons: Our objectives for the study were to: Evaluate current disease problems and mortality rates, including predation rates, in bighorn sheep through captures and monitoring of bighorn sheep. Determine winter spatial relations of wild horses and bighorn sheep through aerial surveys of winter range. Conduct habitat measurements to determine why bighorn sheep were not using what had been mapped with a GIS-based habitat model as suitable bighorn sheep habitat, and sample winter and summer consumption rates of key forage species to see if there were other factors precluding use of these areas by bighorn sheep. Compare winter lamb recruitment rates and total vegetation consumption rates on bighorn sheep winter use areas, with and without wild horses present. Complete year-round GIS-based distribution maps for wild horses and bighorn sheep in order to identify key areas of species overlap and key areas of species separation for potential habitat improvements. NPS park staff asked USGS to answer the following questions: (a) how large is the population?; (b) how many rams are in the population?; (c) in addition to low lamb recruitment, is mortality or dispersal of adults likely contributing to the decline?; and (d) is trophy hunting of rams contributing to the decline?
Report↗
Database of the geologic map of North America— Adapted from the map by J.C. Reed, Jr. and others (2005)
Introduction The Geological Society of America's (GSA) Geologic Map of North America (Reed and others, 2005a; 1:5,000,000) shows the geology of a significantly large area of the Earth, centered on North and Central America and including the submarine geology of parts of the Atlantic and Pacific Oceans. This map is now converted to a Geographic Information System (GIS) database that contains all geologic and base-map information shown on the two printed map sheets and the accompanying explanation sheet. We anticipate this map database will be revised at some unspecified time in the future, likely through the actions of a steering committee managed by the GSA and staffed by scientists from agencies including those responsible for the original map compilation. Regarding the use of this product, as noted by the map's compilers: “The Geologic Map of North America is an essential educational tool for teaching the geology of North America to university students and for the continuing education of professional geologists in North America and elsewhere. In addition, simplified maps derived from the Geologic Map of North America are useful for enlightening younger students and the general public about the geology of the continent.” With publication of this database, the preparation of any type of simplified map is made significantly easier. More important perhaps, the database provides a more accessible means to explore the map information and to compare and analyze it in conjunction with other types of information (for example, land use, soils, biology) to better understand the complex interrelations among factors that affect Earth resources, hazards, ecosystems, and climate.
Data Series↗
Pesticide toxicity index for freshwater aquatic organisms, 2nd edition
The U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program is designed to assess current water-quality conditions, changes in water quality over time, and the effects of natural and human factors on water quality for the Nation's streams and ground-water resources. For streams, one of the most difficult parts of the assessment is to link chemical conditions to effects on aquatic biota, particularly for pesticides, which tend to occur in streams as complex mixtures with strong seasonal patterns. A Pesticide Toxicity Index (PTI) was developed that combines pesticide exposure of aquatic biota (measured concentrations of pesticides in stream water) with acute toxicity estimates (standard endpoints from laboratory bioassays) to produce a single index value for a sample or site. The development of the PTI was limited to pesticide compounds routinely measured in NAWQA studies and to toxicity data readily available from existing databases. Qualifying toxicity data were found for one or more types of test organisms for 124 of the 185 pesticide compounds measured in NAWQA samples, but with a wide range of available bioassays per compound (1 to 232). In the databases examined, there were a total of 3,669 bioassays for the 124 compounds, including 398 48-hour EC50 values (concentration at which 50 percent of test organisms exhibit a sublethal response) for freshwater cladocerans, 699 96-hour LC50 values (concentration lethal to 50 percent of test organisms) for freshwater benthic invertebrates, and 2,572 96-hour LC50 values for freshwater fish. The PTI for a particular sample is the sum of toxicity quotients (measured concentration divided by the median toxicity concentration from bioassays) for each detected pesticide, and thus, is based on the concentration addition model of pesticide toxicity. The PTI can be calculated for specific groups of pesticides and for specific taxonomic groups. Although the PTI does not determine whether water in a sample is toxic to aquatic organisms, its values can be used to rank or compare the toxicity of samples or sites on a relative basis for use in further analysis or additional assessments. The PTI approach may be useful as a basis for comparing the potential significance of pesticides in different streams on a common basis, for evaluating relations between pesticide exposure and observed biological conditions, and for prioritizing where further studies are most needed.
Scientific Investigations Report↗
Water-quality assessment of the White River Basin, Indiana: Analysis of selected information on nutrients, 1980-92
Water-quality data from 23 surfacewater-quality monitoring sites operated by the Indiana Department of Environmental Management and streamflow data from 11 U.S. Geological Survey streamflow-gaging stations in the White River Basin were analyzed to determine recent (1981 90 water years) water-quality conditions, trends, and river loads for ammonia, nitrate, total nitrogen, and total phosphorus. The White River Basin drains 11,349 square miles of central and south-central Indiana and is divided into two nearly equal subbasins the East Fork White River and the White River upstream from its confluence with the East Fork (called the "west fork" of the White River by the State's water-management agencies). Nutrient concentrations generally were higher in the more urbanized west fork than in the more rural east fork because of the much larger volumes of treated municipal sewage, combined-sewer overflows, and urban runoff discharged to the west fork. Concentrations of nutrients, especially ammonia and total phosphorus, were higher downstream from Muncie, Anderson, and Indianapolis than they were upstream from these cities. Nutrient concentrations decreased downstream from Indianapolis in the White River and in the downstream reach of the East Fork White River because of dilution, nitrification, adsorption to stream-bottom sediments, and uptake by aquatic vegetation. Seasonal variations in nutrient concentrations and the relations of nutrient concentrations to streamflow depended on the relative contributions of point and nonpoint sources of the nutrients. Total phosphorus increased with increasing streamflow at monitoring sites on the east fork but decreased with increasing streamflow at sites on the west fork. Increasing concentrations of phosphorus with increasing streamflow were consistent with nonpoint sources of phosphorus that wash off land surfaces, whereas decreasing concentrations of phosphorus with increasing streamflow were consistent with dilution of point sources of phosphorus. Median concentrations of total phosphorus were highest during summer and fall downstream from urban areas on the White River because streamflows that dilute point sources of phosphorus are lowest during summer and fall. Median concentrations of ammonia in the White River were highest in winter because of reduced biological uptake and nitrification of ammonia during cold temperatures.
Indiana↗
Relationship of Eastern hemlock ( Tsuga canadensis ) to the ecology of small streams in Delaware Water Gap National Recreation Area
Hemlock ravines in Delaware Water Gap National Recreation Area (DEWA) are highly valued because of their distinctive aesthetic, recreational and ecological qualities. We conducted a comparative study designed to determine the potential long-term consequences to aquatic communities of the suspected transition from hemlock-dominated forests to mixed hardwood forests as a result of hemlock woolly adelgid (HWA; Adelges tsugae) induced mortality. A landscape analysis of DEWA using Geographic Information Systems (GIs) was used to select 14 hemlock and hardwood site-pairs that were similar in topography (i.e., slope, terrain shape, aspect, light levels) and stream size (first or second order) but differed in forest composition. This paired watershed approach provided a powerful means to discern the influence of hemlock forests on stream communities. This study was designed to provide an aquatic perspective on potential losses of biological diversity should hemlock forests die.
New Jersey;Pennsylvania↗
Benthic invertebrates of fixed sites in the western Lake Michigan drainages, Wisconsin and Michigan, 1993-95
This report describes the variability in family-level benthic-invertebrate population data and the reliability of the data as a water-quality indicator for 11 fixed surface-water sites in the Western Lake Michigan Drainages study area of the National Water-Quality Assessment Program. Benthic-invertebrate-community measures were computed for the following: number of individuals, Hilsenhoff’s Family-Level Biotic Index, number and percent EPT (Ephemeroptera, Plecoptera, and Tricoptera), Margalef’s Diversity Index, and mean tolerance value. Relations between these measures and environmental setting, habitat, and of chemical water quality are examined. Benthic-invertebrate communities varied greatly among fixed sites and within individual streams among multiple-reach and multiple-year sampling. The variations between multiple reaches and years were sometimes larger than those found between different fixed sites. Factors affecting benthic invertebrates included both habitat and chemical quality. Generally, fixed-site streams with the highest diversity, greatest number of benthic invertebrates, and those at which community measures indicated the best water quality also had the best habitat and chemical quality. Variations among reaches are most likely related to differences in habitat. Variations among years are most likely related to climatic changes, which create variations in flow and/or chemical quality. The variability in the data analyzed in this study shows how benthic invertebrates are affected by differences in both habitat and water quality, making them useful indicators of stream health; however, a single benthic-invertebrate sample alone cannot be relied upon to accurately describe water quality of the streams in this study. Benthic-invertebrate data contributed valuable information on the biological health of the 11 fixed sites when used as one of several data sources for assessing water quality.
Michigan, Wisconsin↗
Water-quality, bed-sediment, and biological data (October 2013 through September 2014) and statistical summaries of data for streams in the Clark Fork Basin, Montana
Water, bed sediment, and biota were sampled in streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize aquatic resources in the Clark Fork Basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2013 through September 2014. Bed-sediment and biota samples were collected once at 14 sites during August 2014. This report presents the analytical results and qualityassurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2013 through September 2014. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. At 12 sites, dissolved organic carbon and turbidity samples were collected. In addition, nitrogen (nitrate plus nitrite) samples were collected at two sites. Daily values of mean suspended-sediment concentration and suspended-sediment discharge were determined for four sites. Seasonal daily values of turbidity were determined for four sites. Bed-sediment data include trace-ele­ment concentrations in the fine-grained fraction. Biological data include trace-element concentrations in wholebody tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork Basin are provided for the period of record.
Montana↗
Visitor and community survey results for Kilauea Point National Wildlife Refuge and Lighthouse: Completion report
The U.S. Fish and Wildlife Service (USFWS) and the Central Federal Lands Highway Division of the Federal Highway Administration, U.S. Department of Transportation are currently pursuing the planning and potential design of an alternative transportation system (ATS) for Kilauea Point National Wildlife Refuge (Refuge or Kilauea Point NWR). The USFWS and CFLHD seek an alternative transportation solution that provides the highest quality visitor experience and is sensitive to biological and cultural resources and the needs of the local community. In planning the alternative transportation system, managers need to consider how an ATS would change factors such as visitor access, visitor experience, visitor willingness to pay, and visitor net economic benefits. The Policy Analysis and Science Assistance branch (PASA) at the U.S. Geological Survey Fort Collins Science Center is dedicated to studying relations between humans and the environment. The objective of PASA is to conduct studies to understand how humans are affected by environmental management decisions and how human activities impact use and conservation of natural resources.
Hawaii↗
Determination of steroid hormones and related compounds in filtered and unfiltered water by solid-phase extraction, derivatization, and gas chromatography with tandem mass spectrometry
A new analytical method has been developed and implemented at the U.S. Geological Survey National Water Quality Laboratory that determines a suite of 20 steroid hormones and related compounds in filtered water (using laboratory schedule 2434) and in unfiltered water (using laboratory schedule 4434). This report documents the procedures and initial performance data for the method and provides guidance on application of the method and considerations of data quality in relation to data interpretation. The analytical method determines 6 natural and 3 synthetic estrogen compounds, 6 natural androgens, 1 natural and 1 synthetic progestin compound, and 2 sterols: cholesterol and 3--coprostanol. These two sterols have limited biological activity but typically are abundant in wastewater effluents and serve as useful tracers. Bisphenol A, an industrial chemical used primarily to produce polycarbonate plastic and epoxy resins and that has been shown to have estrogenic activity, also is determined by the method. A technique referred to as isotope-dilution quantification is used to improve quantitative accuracy by accounting for sample-specific procedural losses in the determined analyte concentration. Briefly, deuterium- or carbon-13-labeled isotope-dilution standards (IDSs), all of which are direct or chemically similar isotopic analogs of the method analytes, are added to all environmental and quality-control and quality-assurance samples before extraction. Method analytes and IDS compounds are isolated from filtered or unfiltered water by solid-phase extraction onto an octadecylsilyl disk, overlain with a graded glass-fiber filter to facilitate extraction of unfiltered sample matrices. The disks are eluted with methanol, and the extract is evaporated to dryness, reconstituted in solvent, passed through a Florisil solid-phase extraction column to remove polar organic interferences, and again evaporated to dryness in a reaction vial. The method compounds are reacted with activated -methyl--trimethylsilyl trifluoroacetamide at 65 degrees Celsius for 1 hour to form trimethylsilyl or trimethylsilyl-enol ether derivatives that are more amenable to gas chromatographic separation than the underivatized compounds. Analysis is carried out by gas chromatography with tandem mass spectrometry using calibration standards that are derivatized concurrently with the sample extracts. Analyte concentrations are quantified relative to specific IDS compounds in the sample, which directly compensate for procedural losses (incomplete recovery) in the determined and reported analyte concentrations. Thus, reported analyte concentrations (or analyte recoveries for spiked samples) are corrected based on recovery of the corresponding IDS compound during the quantification process. Recovery for each IDS compound is reported for each sample and represents an absolute recovery in a manner comparable to surrogate recoveries for other organic methods used by the National Water Quality Laboratory. Thus, IDS recoveries provide a useful tool for evaluating sample-specific analytical performance from an absolute mass recovery standpoint. IDS absolute recovery will differ and typically be lower than the corresponding analyte’s method recovery in spiked samples. However, additional correction of reported analyte concentrations is unnecessary and inappropriate because the analyte concentration (or recovery) already is compensated for by the isotope-dilution quantification procedure. Method analytes were spiked at 10 and 100 nanograms per liter (ng/L) for most analytes (10 times greater spike levels were used for bisphenol A and 100 times greater spike levels were used for 3--coprostanol and cholesterol) into the following validation-sample matrices: reagent water, wastewater-affected surface water, a secondary-treated wastewater effluent, and a primary (no biological treatment) wastewater effluent. Overall method recovery for all analytes in these matrices averaged 100 percent, with overall relative standard deviation of 28 percent. Mean recoveries of the 20 individual analytes for spiked reagent-water samples prepared along with field samples and analyzed in 2009–2010 ranged from 84–104 percent, with relative standard deviations of 6–36 percent. Concentrations for two analytes, equilin and progesterone, are reported as estimated because these analytes had excessive bias or variability, or both. Additional database coding is applied to other reported analyte data as needed, based on sample-specific IDS recovery performance. Detection levels were derived statistically by fortifying reagent water at six different levels (0.1 to 4 ng/L) and range from about 0.4 to 4 ng/L for 16 analytes. Interim reporting levels applied to analytes in this report range from 0.8 to 8 ng/L. Bisphenol A and the sterols (cholesterol and 3-beta-coprostanol) were consistently detected in laboratory and field blanks. The minimum reporting levels were set at 100 ng/L for bisphenol A and at 200 ng/L for the two sterols to prevent any bias associated with the presence of these compounds in the blanks. A minimum reporting level of 2 ng/L was set for 11-ketotestosterone to minimize false positive risk from an interfering siloxane compound emanating as chromatographic-column bleed, from vial septum material, or from other sources at no more than 1 ng/L.
Techniques and Methods↗
Deep-sea coral research and technology program: Alaska deep-sea coral and sponge initiative final report
Deep-sea coral and sponge ecosystems are widespread throughout most of Alaska’s marine waters. In some places, such as the central and western Aleutian Islands, deep-sea coral and sponge resources can be extremely diverse and may rank among the most abundant deep-sea coral and sponge communities in the world. Many different species of fishes and invertebrates are associated with deep-sea coral and sponge communities in Alaska. Because of their biology, these benthic invertebrates are potentially impacted by climate change and ocean acidification. Deepsea coral and sponge ecosystems are also vulnerable to the effects of commercial fishing activities. Because of the size and scope of Alaska’s continental shelf and slope, the vast majority of the area has not been visually surveyed for deep-sea corals and sponges. NOAA’s Deep Sea Coral Research and Technology Program (DSCRTP) sponsored a field research program in the Alaska region between 2012–2015, referred to hereafter as the Alaska Initiative. The priorities for Alaska were derived from ongoing data needs and objectives identified by the DSCRTP, the North Pacific Fishery Management Council (NPFMC), and Essential Fish Habitat-Environmental Impact Statement (EFH-EIS) process. This report presents the results of 15 projects conducted using DSCRTP funds from 2012-2015. Three of the projects conducted as part of the Alaska deep-sea coral and sponge initiative included dedicated at-sea cruises and fieldwork spread across multiple years. These projects were the eastern Gulf of Alaska Primnoa pacifica study, the Aleutian Islands mapping study, and the Gulf of Alaska fish productivity study. In all, there were nine separate research cruises carried out with a total of 109 at-sea days conducting research. The remaining projects either used data and samples collected by the three major fieldwork projects or were piggy-backed onto existing research programs at the Alaska Fisheries Science Center (AFSC).
NOAA Technical Memorandum↗
Central Plains Water Science Center bookmark
The U.S. Geological Survey Central Plains Water Science Center, serving the states of Kansas and Nebraska, has collected and interpreted hydrologic information for more than a century. Data collected include streamflow and gage height, reservoir content, water quality and water quantity, suspended sediment, and groundwater levels. Interpretative hydrologic studies are completed on national, regional, statewide, and local levels and cooperatively funded through partnerships with these agencies. The U.S. Geological Survey provides impartial scientific information to describe and understand the health of our ecosystems and environment; minimize loss of life and property from natural disasters; manage water, biological, energy, and mineral resources; and enhance and protect our quality of life. These collected data are in the National Water Information System (Kansas: https://dashboard.waterdata.usgs.gov/app/nwd/en/ and Nebraska: https://dashboard.waterdata.usgs.gov/app/nwd/en/ ), and all results are documented in reports that also are online (Kansas: https://www.usgs.gov/centers/kswsc and Nebraska: https://www.usgs.gov/centers/nebraska-water-science-center/publications ).
General Information Product↗
Evaluation of airborne thermal-infrared image data for monitoring aquatic habitats and cultural resources within the Grand Canyon
This study examined thermal-infrared (TIR) image data acquired using the airborne Advanced Thematic Mapper (ATM) sensor in the afternoon of July 25th, 2000 over a portion of the Colorado River corridor to determine the capability of these 100-cm resolution data to address some biologic and cultural resource requirements for GCMRC. The requirements investigated included the mapping of warm backwaters that may serve as fish habitats and the detection (and monitoring) of archaeological structures and natural springs that occur on land. This report reviews the procedure for calibration of the airborne TIR data to obtain surface water temperatures and shows the results for various river reaches within the acquired river corridor. With respect to mapping warm backwater areas, our results show that TIR data need to be acquired with a gain setting that optimizes the range of temperatures found within the water to increase sensitivity of the resulting data to a level of 0.1 °C and to reduce scan-line noise. Data acquired within a two-hour window around maximum solar heating (1:30 PM) is recommended to provide maximum solar heating of the water and to minimize cooling effects of late-afternoon shadows. Ground-truth data within the temperature range of the warm backwaters are necessary for calibration of the TIR data. The ground-truth data need to be collected with good locational accuracy. The derived water-temperature data provide the capability for rapid, wide-area mapping of warm-water fish habitats using a threshold temperature for such habitats. The collected daytime TIR data were ineffective in mapping (detecting) both archaeological structures and natural springs (seeps). The inability of the daytime TIR data to detect archaeological structures is attributed to the low thermal sensitivity (0.3 °C) of the collected data. The detection of subtle thermal differences between geologic materials requires sensitivities of at least 0.1 °C, which can be obtained by most TIR sensors using an appropriate gain setting. Simultaneous data collection for both land and water purposes can be achieved using sensors that collect TIR data in two separate channels, each channel using a gain setting most appropriate for land or water. The detection of archaeological structures and natural water seeps would also be improved by collection of data after sunset, which would require a separate data acquisition from that providing surface water temperature data and therefore additional cost. At this point, the cost for acquiring TIR data is quite high ($620/river-km) compared to the potential benefits of the data, unless reflected-wavelength data are also collected that can satisfy other GCMRC protocol requirements (such as mapping riparian vegetation). This is especially true if multiple data acquisitions are required during the year for temporal analyses of backwater areas. The cost for these data cannot be totally mitigated by its ability to partly replace the need for ground surveys of backwaters because calibration of the TIR data will require some ground-truth data from warm backwater areas (in addition to low-temperature main-stem data). However, the airborne data can provide a product that cannot be approached by ground surveys, that being an instantaneous (2 hour) map of surface water temperature over a 160-km stretch of the Grand Canyon.
Arizona↗
Environmental Setting of the Lower Merced River Basin, California
In 1991, the U.S. Geological Survey began to study the effects of natural and anthropogenic influences on the quality of ground water, surface water, biology, and ecology as part of the National Water-Quality Assessment (NAWQA) Program. As part of this program, the San Joaquin-Tulare Basins study unit is assessing parts of the lower Merced River Basin, California. This report provides descriptions of natural and anthropogenic features of this basin as background information to assess the influence of these and other factors on water quality. The lower Merced River Basin, which encompasses the Mustang Creek Subbasin, gently slopes from the northeast to the southwest toward the San Joaquin River. The arid to semiarid climate is characterized by hot summers (highs of mid 90 degrees Fahrenheit) and mild winters (lows of mid 30 degrees Fahrenheit). Annual precipitation is highly variable, with long periods of drought and above normal precipitation. Population is estimated at about 39,230 for 2000. The watershed is predominately agricultural on the valley floor. Approximately 2.2 million pounds active ingredient of pesticides and an estimated 17.6 million pounds active ingredient of nitrogen and phosphorus fertilizer is applied annually to the agricultural land.
Scientific Investigations Report↗
Annual Report for 2003 Wild Horse Research and Field Activities
As stated in the Wild Horse Fertility Control Field Trial Plan, the Bureau of Land Management (BLM) has an immediate need for a safe, effective contraceptive agent to assist in the management of the large number of wild horses on western rangelands. The BLM and the U.S. Geological Survey-Biological Resources Discipline (USGS/BRD) are testing the immunocontraceptive agent Porcine Zonae Pellucida (PZP) in field trials with three free-roaming herds of western wild horses. Extensive research has already been conducted on the safety, efficacy, and duration of PZP applications in both domestic and feral horses on eastern barrier islands and in some select trials I with wild horses in Nevada managed by the BLM. However, significant questions remain concerning the effects of I PZP application at the population level in the wild, as well as effects at the individual level on behavior, social structure, and harem dynamics of free-ranging animals. These questions are best answered with field trials on wild horse herds under a tight research protocol. The ultimate goal is to provide the BLM with the protocols and information necessary to begin using fertility control to regulate population growth rates in wild horse herds on a broader scale. Fertility control is intended to assist the conventional capture, removal, and adoption process as a I means of controlling excess numbers of wild horses and burros, and to greatly reduce the adoption costs and numbers of animals handled. Fertility control is not intended to totally replace the removal and adoption process. The USGSIBRD began assisting the BLM with field trials of immunocontraceptive fertility control of wild horses in early 2001. The first PZP treatments were applied during gathers at the Pryor Mountain Wild Horse Range in September 2001, and the Little Book Cliffs Wild Horse Range, Colorado, in July 2002. At those gathers, 5 horses were treated in the Pryor Mountain WHR, and 23 were treated in the Little Book Cliffs WHR with PZP. These initial treatments were followed by booster injections in 2002. The second injection is required in order to raise, and I maintain, the titer levels of mares high enough to be considered contracepted. By the end of 2002, 13 horses on the Pryor Mountain WHR had received both injections, as had 11 horses in the Little Book Cliffs WHR. In 2003, intensive research efforts were carried out by the USGSIBRD at three field locations; Pryor Mountain WHR, Little I Book Cliffs WHR, and McCullough Peaks Wild Horse Management Area. The work at these sites during this I calendar year included treatment of wild horse mares with PZP in the Pryor herd and Little Book Cliffs herd, development and implementation of behavioral research to investigate potential affects of PZP treatment, continued tracking of demography and foal production in all three herds, and early phases of investigating aerial population estimation survey techniques. Detailed descriptions of these research topics can be found in the Wild Horse and Burro Management Strategic Research Plan and the Wild Horse Fertility Control Field Trial Plan. Field work in 2003 was conducted by USGSIBRD and BLM staff with the assistance of many dedicated individuals. See I Acknowledgments for more details. This report is meant to highlight the activities of the 2003 field season, as well as to provide a general overview of the data collected. More in-depth data analysis will be conducted following the conclusion of each I phase of the research project, and in many cases will not be possible until several seasons of data are collected.
Open-File Report↗