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At least 739 records · Page 41Linked to original sources

USGS2018

Greater sage-grouse vital rates after wildfire

Greater sage-grouse ( Centrocercus urophasianus ) have been subject to long-term and continuing declines in population and habitat since European settlement of western North America. Increased wildfire activity constitutes a primary threat to the species in western portions of their range, with documented declines in wildfire-affected populations. Following a 187,000-ha wildfire in southeastern Oregon and northern Nevada, USA, we used global positioning system (GPS) telemetry to monitor nest initiation, nest survival, nesting habitat, and adult survival of female sage-grouse during 2013 and 2014. We used known-fate models in Program MARK to estimate daily nest survival and monthly adult survival in relation to temporal patterns, physiological characteristics of females, and habitat and land-cover characteristics. We assessed habitat characteristics using geographic information system (GIS)-derived measures of post-fire habitat condition and land cover. Nest initiation rate following the fire was comparable to that observed in unaltered habitat. We observed nesting rates of 90% and 100% during 2013 and 2014, respectively, and renesting rates of 23% and 57% during the same years. Daily nest survival was consistently low in comparison to rates observed in concurrent studies in the region, for first nests during both years, and for second nests during 2013, but survival markedly increased for second nests during 2014. Sage-grouse generally did not leave the fire perimeter to nest, with 64% and 73% of nests located in the fire boundary during 2013 and 2014, respectively. Approximately 27% of nests were located in burned habitat during 2013, and 20% of nests in 2014 were located in burned habitat. Adult survival varied by month, and although patterns of monthly survival were similar between years, monthly survival rates were significantly reduced from the beginning of the study through the end of the first post-fire growing season. Our results indicate that sage-grouse continue to use fire-affected habitat in the years immediately following wildfire and sage-grouse experienced lower nest survival and adult female survival than other populations during the same period.

Oregon↗

USGS2001

Mourning dove productivity in California during 1992-95: Was it sufficient to balance mortality?

Mourning dove ( Zenaida macroura ) populations have declined steadily in the western United States since 1966. We investigated the role of recruitment in this long-term problem by studying nesting ecology of mourning doves from March to September 1992-95, in the northern Central Valley, California, USA. We studied nesting doves in blue oak woodlands ( Quercus douglasii ), willow-cottonwood riparian habitats ( Salix spp., Populus fremontii ), and commercial walnut, prune, pistachio, and cherry orchards. We used 3,047 nests for our analyses. Doves initiated nests from 14 March to 28 August; nesting season lengths ranged from 105 to 158 days. Only 2-5% of nests remained active after 1 September each year, and latest dates that young fledged ranged from 28 August to 21 September. Mayfield estimates of nest success rates varied inconsistently among study areas; annual success rates ranged from 35-59% for incubation, 49-79% for brooding, and 22-45% for total. Akaike's Information Criteria (AIC) analysis showed that total nest success was higher during years with relatively warm-dry springs (March-May, 1992 and 1994 [35-45% success]) than years with relatively cool-wet springs (1993 and 1995 [22-37% success]). Additionally, AIC analysis showed that fledglings produced/pair and fledglings/nesting attempt were highest during the warm-dry years. Likewise, we recorded more total pairs, nests, and total fledglings, and longer nesting seasons during the warm-dry years. The lower limit of the 95% confidence interval for fledglings produced/pair for all years exceeded the value of 2.5 previously estimated with banding data from 1967-74 as the value required to maintain breeding populations in California. Thus, if our productivity estimates reflected the general population, and annual survival rates had not changed, recruitment should have been adequate to produce an increasing population. Since this was not occurring, managers should complement population surveys with annual banding and harvest surveys to enable thorough examination of the relationships among survival, productivity, and abundance.

California↗

USGS2017

Declining survival of black brant from subarctic and arctic breeding areas

Since the mid 1990s, the number of black brant ( Branta bernicla nigricans ; brant) nests on the Yukon‐Kuskokwim Delta (YKD), Alaska, USA, the historically predominant breeding area of brant, has declined steadily. This has caused researchers and managers to question if arctic breeding populations can compensate for the reduction in brant nests on the YKD. An important component of the assessment of brant population dynamics is having current estimates of first‐year and adult survival. We banded brant at 4 locations in Arctic Alaska and western Canada, and at 1 location in the subarctic, the Tutakoke River (TR) colony on the YKD, 1990–2015. We used joint live and dead mark‐recapture models to estimate first‐year and adult (≥1 yr old) survival of brant. We also used band recovery rates from a Brownie model to assess temporal trends in band recovery rates of adult brant. First‐year survival of brant hatched at TR declined from approximately 0.60 to <0.20 and, although first‐year survival generally was higher for goslings marked in the Arctic, their survival declined from approximately 0.70 in the early 1990s to ≤0.45 in the 2010s. Annual survival of adult females decreased from an average of 0.881 (95% CI = 0.877–0.885) to 0.822 (95% CI = 0.815–0.829) at TR and from 0.851 (95% CI = 0.843–0.860) to 0.821 (95% CI = 0.805–0.836) in the Arctic, from 1990 to 2014. Band recovery rates of adults generally were <1.25% until the last several years of study, when they reached ≤3.5%. Although the current harvest rates may be partially additive to natural mortality, we do not believe that harvest is the main influence on the declines in survival. The general decline in survival rates of brant breeding across a large geographic area may be influenced by a reduction in the quality of migration and wintering ground habitats. We suggest an analysis of seasonal survival of brant to test the hypothesis that declining habitat quality on wintering or spring migration areas is reducing survival. Our results suggest that the number of breeding pairs at TR will continue to decline and also brings into question the ability of arctic breeding populations to grow at a rate necessary to offset the declines on the YKD. Researchers should continue to closely monitor survival and harvest rates of brant, and assess methods currently used to monitor their abundance.

Journal of Wildlife Management↗

USGS2008

Seasonal survival of radiomarked emperor geese in western Alaska

The population of emperor geese ( Chen canagica ) in western Alaska, USA, declined by >50% from the 1960s to the mid‐1980s and has increased only slightly since. Rates of population increase among arctic geese are especially sensitive to changes in adult survival. Improving adult survival in seasons or geographic areas where survival is low may be the best means of increasing the emperor goose population. We monitored fates of 133 adult female emperor geese that were radiomarked with surgically implanted very high frequency or satellite radiotransmitters from 1999 to 2004 to assess whether monthly survival varied among years, seasons, or geographic areas. Because of uncertainties in determining whether a bird had died based on the radio signal, we analyzed 2 versions of the data. One version used conservative criteria to identify which birds had died based on radio signals and the other used more liberal criteria. In the conservative version of the data we detected 12 mortalities of emperor geese, whereas in the liberal interpretation there were 18 mortalities. In both versions, the models with greatest support indicated that monthly survival varied seasonally and that compared to most seasons estimated monthly survival was lower (φ = 0.95–0.98) in May and August when emperor geese were mainly on the Yukon‐Kuskokwim Delta. From 44% to 47% of annual mortality occurred in those months. Estimated monthly survival was higher (φ = 0.98–1.0) from September through March when emperor geese were at autumn staging or wintering areas and in June and July when birds were nesting, rearing broods, or molting. Estimated annual survival was 0.85 (95% CI = 0.77–0.92) in the best‐supported model when we used conservative criteria to identify mortalities and 0.79 (95% CI = 0.74–0.85) under the best model using liberal mortality criteria. Lower survival in August and May corresponded to periods when subsistence harvest of emperor geese was likely highest. Managers may be able to most effectively influence population growth rate of emperor geese by reducing subsistence harvest on the Yukon‐Kuskokwim Delta in May and August.

Alaska↗

USGS2021

Efficacy of manipulating reproduction of common ravens to conserve sensitive prey species: Three case studies

Expansion of human enterprise across western North America has resulted in an increase in availability of anthropogenic resource subsidies for generalist species. This has led to increases in generalists’ population numbers across landscapes that were previously less suitable for their current demographic rates. Of particular concern are growing populations of common ravens ( Corvus corax ; ravens), because predation by ravens is linked to population declines of sensitive species. Ecosystem managers seek management options for mitigating the adverse effects of raven predation where unsustainable predator–prey conflicts exist. We present 3 case studies examining how manipulating reproductive success of ravens influences demographic rates of 2 sensitive prey species. Two case studies examine impacts of removing raven nests or oiling raven eggs on nest survival of greater sage-grouse ( Centrocercus urophasianus ; sage-grouse) within Wyoming and the Great Basin of California and Nevada, USA, respectively. The third case study uses Mojave desert tortoise ( Gopherus agassizii ; tortoise) decoys to examine effects of oiling raven eggs on depredation rates of juvenile tortoises in the Mojave Desert in California. Initial trial years from all 3 case studies were consistent in finding improved vital rates associated with the application of strategies for reducing reproductive success of ravens. Specifically, removal of raven nests resulted in increased nest survival of sage-grouse within treatment areas where predation by ravens was the primary cause of nest failure. In addition, nest survival of sage-grouse and survival of juvenile tortoise decoys was higher following a treatment of oiling the eggs of ravens in their nests at 2 sites within the Great Basin and 4 tortoise conservation areas in the Mojave Desert in California. Along with specialized technologies that can make techniques such as egg-oiling more feasible, these findings support these management practices as important tools for managing ravens, especially in areas where breeding ravens have negative impacts on sensitive prey species.

California, Nevada, Wyoming↗

USGS2011

Habitat and landscape effects on abundance of Missouri's grassland birds

Of 6 million ha of prairie that once covered northern and western Missouri, <36,500 ha remain, with planted, managed, and restored grasslands comprising most contemporary grasslands. Most grasslands are used as pasture or hayfields. Native grasses largely have been replaced by fescue ( Festuca spp.) on most private lands (almost 7 million ha). Previously cropped fields set aside under the Conservation Reserve Program (CRP) varied from a mix of cool-season grasses and forbs, or mix of native warm-season grasses and forbs, to simple tall-grass monocultures. We used generalized linear mixed models and distance sampling to assess abundance of 8 species of breeding grassland birds on 6 grassland types commonly associated with farm practices in Missouri and located in landscapes managed for grassland-bird conservation. We selected Bird Conservation Areas (BCAs) for their high percentage of grasslands and grassland-bird species, and for <5% forest cover. We used an information-theoretic approach to assess the relationship between bird abundance and 6 grassland types, 3 measures of vegetative structure, and 2 landscape variables (% grassland and edge density within a 1-km radius). We found support for all 3 levels of model parameters, although there was less support for landscape than vegetation structure effects likely because we studied high-percentage-grassland landscapes (BCAs). Henslow's sparrow ( Ammodramus henslowii ) counts increased with greater percentage of grassland, vegetation height-density, litter depth, and shrub cover and lower edge density. Henslow's sparrow counts were greatest in hayed native prairie. Dickcissel ( Spiza americana ) counts increased with greater vegetation height-density and were greatest in planted CRP grasslands. Grasshopper sparrow ( A. savannarum ) counts increased with lower vegetation height, litter depth, and shrub cover. Based on distance modeling, breeding densities of Henslow's sparrow, dickcissel, and grasshopper sparrow in the 6 grassland types ranged 0.9–2.6, 1.4–3.2, and 0.1–1.5 birds/ha, respectively. We suggest different grassland types and structures (vegetation height, litter depth, shrub cover) are needed to support priority grassland-bird species in Missouri.

Journal of Wildlife Management↗

USGS2017

Post-breeding migration and connectivity of red knots in the Western Atlantic

Red knots ( Calidris canutus rufa ) have 3 distinct nonbreeding regions: 1 in the southeastern United States and Caribbean, another on the northeast coast of Brazil in the Maranhão region, and a third along the Patagonian coasts of Chile and Argentina. Effective conservation and recovery of this threatened long-distance migrant will require knowledge of population structure, migration ecology, and abundance and distribution throughout the annual cycle. We conducted a stopover population and biogeographic assessment of knots at the Altamaha River Delta, Georgia, an important stopover area in the southeastern United States. We estimated stopover population size and stopover duration during post-breeding migration in 2011 at the Altamaha study area using mark-resight data, and we inferred nonbreeding regions for this stopover population using stable isotope ratios of carbon and nitrogen in feathers, and observations (sightings and captures) during boreal winter from across the hemisphere. With an integrated Bayesian analysis of all these data, we also estimated the number of birds in the southeastern United States and northern Brazil during boreal winter. For mark-resight analyses in Georgia, we made observations of marked individuals during 14 weeks from early August to early November 2011 and detected 814 individually marked birds. We used the Jolly-Seber mark-recapture model and estimated the southbound passage population at approximately 23,400 red knots. In ongoing studies elsewhere, isotope samples were collected from 175 (21%) of the 814 birds detected in our study, and ≥1 sighting or capture record during boreal winter was located in data repositories for 659 birds (81%). Isotopic signatures and boreal winter records indicate that the majority (82–96%) of the birds that stopped at the Altamaha Delta spend the boreal winter in the northern part of the nonbreeding range (southeast USA, Caribbean, and northern Brazil). Knots migrating to the southeastern United States, Caribbean, or Brazil remained on the Altamaha Delta for 42 days, whereas birds migrating to Tierra del Fuego remained only 21 days. Combining our estimate of the Altamaha stopover population size (23,400 birds) and the estimated proportion in the northern nonbreeding region (82–96%), we derived a minimum estimate of the number of knots in the southeastern United States, Caribbean, and northern South America during the boreal winter: approximately 20,800 knots, of which approximately 10,400 knots occupy the southeastern United States and 5,400 occupy Brazil. Our results provide additional evidence that coastal Georgia is an important migration area for red knots, and provide information about population structure and migratory connectivity that will be valuable for conservation planning.

Georgia↗

USGS2016

Enhancing and restoring habitat for the desert tortoise

Habitat has changed unfavorably during the past 150 y for the desert tortoise Gopherus agassizii , a federally threatened species with declining populations in the Mojave Desert and western Sonoran Desert. To support recovery efforts, we synthesized published information on relationships of desert tortoises with three habitat features (cover sites, forage, and soil) and candidate management practices for improving these features for tortoises. In addition to their role in soil health and facilitating recruitment of annual forage plants, shrubs are used by desert tortoises for cover and as sites for burrows. Outplanting greenhouse-grown seedlings, protected from herbivory, has successfully restored (>50% survival) a variety of shrubs on disturbed desert soils. Additionally, salvaging and reapplying topsoil using effective techniques is among the more ecologically beneficial ways to initiate plant recovery after severe disturbance. Through differences in biochemical composition and digestibility, some plant species provide better-quality forage than others. Desert tortoises selectively forage on particular annual and herbaceous perennial species (e.g., legumes), and forage selection shifts during the year as different plants grow or mature. Nonnative grasses provide low-quality forage and contribute fuel to spreading wildfires, which damage or kill shrubs that tortoises use for cover. Maintaining a diverse “menu” of native annual forbs and decreasing nonnative grasses are priorities for restoring most desert tortoise habitats. Reducing herbivory by nonnative animals, carefully timing herbicide applications, and strategically augmenting annual forage plants via seeding show promise for improving tortoise forage quality. Roads, another disturbance, negatively affect habitat in numerous ways (e.g., compacting soil, altering hydrology). Techniques such as recontouring road berms to reestablish drainage patterns, vertical mulching (“planting” dead plant material), and creating barriers to prevent trespasses can assist natural recovery on decommissioned backcountry roads. Most habitat enhancement efforts to date have focused on only one factor at a time (e.g., providing fencing) and have not included proactive restoration activities (e.g., planting native species on disturbed soils). A research and management priority in recovering desert tortoise habitats is implementing an integrated set of restorative habitat enhancements (e.g., reducing nonnative plants, improving forage quality, augmenting native perennial plants, and ameliorating altered hydrology) and monitoring short- and long-term indicators of habitat condition and the responses of desert tortoises to habitat restoration.

Mojave Desert↗

USGS2020

Annotated bibliography of scientific research on greater sage-grouse published from 2015 to 2019

The greater sage-grouse ( Centrocercus urophasianus ; hereafter GRSG) has been a focus of scientific investigation and management action for the past two decades. The 2015 U.S. Fish and Wildlife Service listing determination of “not warranted” was in part due to a large-scale collaborative effort to develop strategies to conserve GRSG populations and their habitat and to reduce threats to both. New scientific information augments existing knowledge and can help inform updates or modifications to existing plans for managing GRSG and sagebrush ecosystems. However, the sheer number of scientific publications can be a challenge for managers tasked with evaluating and determining the need for potential updates to existing planning documents. To assist in this process, the U.S. Geological Survey (USGS) has reviewed and summarized the scientific literature published since January 1, 2015. The first GRSG literature summary was published early in 2018. Here we provide an update to that document by adding summaries of articles published between January 6, 2018 and October 2, 2019. To identify articles and reports published about GRSG, we first conducted a structured search of three reference databases (Web of Science, Scopus, and Google Scholar) using the search term “greater sage-grouse.” We refined the initial list of products by (1) removing duplicates, (2) excluding products that were not published as research or scientific review articles in peer-reviewed journals or as formal technical reports, and (3) retaining only those products for which GRSG or their habitat was a research focus. We summarized the contents of each product by using a consistent structure (background, objectives, methods, location, findings, and implications) and assessed the content of each product relevant to a list of 31 management topics. These topics include GRSG biology and habitat characteristics along with potential management actions, land uses, and environmental factors related to GRSG management and conservation. We also noted which articles/reports created new geospatial data. Our original search, conducted on January 7, 2018, and the application of our criteria, resulted in the inclusion of 169 published products (2 of these products were published corrections to journal articles). This update adds summaries of 69 products published between then and October 2, 2019. The management topics most commonly addressed were GRSG behavior or demographics and GRSG habitat selection or habitat characteristics at broad or site scales. Few products addressed captive breeding, recreation, wild horses and burros, and range management structures (including fences). The management topics with the largest increase in representation between the 2018 GRSG literature summary and this update were GRSG survival and GRSG population estimates or targets, which were each addressed in 16 percent of products in the original literature summary document, but were addressed in 30 and 33 percent, respectively, of newly summarized products. Topics with the largest declines in representation were conifer expansion, - 17 to 10 percent, and new geospatial data, -31 to 21 percent. We include in this annotated bibliography the full citation, Digital Object Identifier (DOI), product summary, and management topics addressed by each product. The online version of this bibliography (https://apps.usgs.gov/gsgbib/index.php) is searchable by topic and location and includes links to journal landing pages for each original publication. A substantial body of literature has been compiled on research explicitly related to the conservation, management, monitoring, and assessment of GRSG. These studies may inform planning and management actions that seek to balance conservation, economic, and social objectives and manage diverse resource uses and values across the western United States. The review process for this product included requesting input on each summary from one or more authors of the original peer-reviewed article or report and a formal review of the entire document by three independent reviewers for the original document and by two independent reviewers for the updated document and, subsequently, the USGS Bureau Approving Official. This process is consistent with USGS Fundamental Science Practices.

Arizona, California, Colorado, Idaho, Kansas, Mont↗

USGS2022

Accounting for residual heterogeneity in double-observer sightability models decreases bias in burro abundance estimates

Feral burros ( Equus asinus ) and horses ( E. ferus caballus ) inhabiting public land in the western United States are intended to be managed at population levels established to promote a thriving, natural ecological balance. Double-observer sightability (M DS ) models, which use detection records from multiple observers and sighting covariates, perform well for estimating feral horse abundances, but their effectiveness for use in burro populations is less understood. These M DS models help minimize detection bias, yet bias can be further reduced with models that account for unmodeled variation, or residual heterogeneity, in detection probability. In populations containing radio-marked individuals, residual heterogeneity can be estimated with M DS models by including a covariate that corresponds to the marked status of a group (M H models). Another approach is to use information from detections missed by both observers to account for the characteristics that make groups more or less likely to be detected, or recaptured, by the second observer (M R models). We used aerial survey data from 3 burro populations (Sinbad Herd Management Area, UT [2016–2018], Lake Pleasant Herd Management Area, AZ [2017], and Fort Irwin National Training Center, CA [2016–2017]) to develop M DS models applicable for feral burros in the southwestern United States. Our objectives were to quantify precision and bias of standard M DS surveys for feral burros and to examine which model type for incorporating residual heterogeneity (M H or M R ) would result in the least-biased estimates of burro populations relative to the minimum number known alive (MNKA) within the Sinbad Herd Management Area. Standard M DS model estimates achieved a mean coefficient of variation of 0.08, while underestimating MNKA by an average of 27.1%. Accounting for residual heterogeneity through recapture probability in M R models resulted in estimates closer to MNKA than M H models (9.5% vs. 16.5% less than MNKA). Our results indicate that M DS models can achieve precise enough estimates to monitor feral burro populations, but they routinely produce negatively biased estimates. We encourage the use of radio-collars to reduce bias in future burro surveys by accounting for residual heterogeneity through M R models.

Journal of Wildlife Management↗

USGS2010

Revisions of rump fat and body scoring indices for deer, elk, and moose

Because they do not require sacrificing animals, body condition scores (BCS), thickness of rump fat (MAXFAT), and other similar predictors of body fat have advanced estimating nutritional condition of ungulates and their use has proliferated in North America in the last decade. However, initial testing of these predictors was too limited to assess their reliability among diverse habitats, ecotypes, subspecies, and populations across the continent. With data collected from mule deer ( Odocoileus hemionus ), elk ( Cervus elaphus ), and moose ( Alces alces ) during initial model development and data collected subsequently from free-ranging mule deer and elk herds across much of the western United States, we evaluated reliability across a broader range of conditions than were initially available. First, to more rigorously test reliability of the MAXFAT index, we evaluated its robustness across the 3 species, using an allometric scaling function to adjust for differences in animal size. We then evaluated MAXFAT, rump body condition score (rBCS), rLIVINDEX (an arithmetic combination of MAXFAT and rBCS), and our new allometrically scaled rump-fat thickness index using data from 815 free-ranging female Roosevelt and Rocky Mountain elk ( C. e. roosevelti and C. e. nelsoni ) from 19 populations encompassing 4 geographic regions and 250 free-ranging female mule deer from 7 populations and 2 regions. We tested for effects of subspecies, geographic region, and captive versus free-ranging existence. Rump-fat thickness, when scaled allometrically with body mass, was related to ingesta-free body fat over a 38–522-kg range of body mass ( r 2 = 0.87; P < 0.001), indicating the technique is remarkably robust among at least the 3 cervid species of our analysis. However, we found an underscoring bias with the rBCS for elk that had >12% body fat. This bias translated into a difference between subspecies, because Rocky Mountain elk tended to be fatter than Roosevelt elk in our sample. Effects of observer error with the rBCS also existed for mule deer with moderate to high levels of body fat, and deer body size significantly affected accuracy of the MAXFAT predictor. Our analyses confirm robustness of the rump-fat index for these 3 species but highlight the potential for bias due to differences in body size and to observer error with BCS scoring. We present alternative LIVINDEX equations where potential bias from rBCS and bias due to body size are eliminated or reduced. These modifications improve the accuracy of estimating body fat for projects intended to monitor nutritional status of herds or to evaluate nutrition's influence on population demographics.

Journal of Wildlife Diseases↗

USGS2021

Estimating abundance and simulating fertility control in feral burros

Overabundant populations of feral equids are negatively impacting rangelands in the western United States. To effectively manage these populations, robust estimates of abundance and demography are necessary, as well as cost-effective methods of reducing abundance. We used a double-observer-sightability aerial survey method to estimate the number of feral burros (Equus asinus) occupying the Fort Irwin National Training Center (NTC), California, USA. We examined the efficacy of using porcine zona pellucida (PZP) immunocontraception as a control agent and used matrix population models to simulate how changes in demographic rates would influence abundance. We estimated there were 690 (CI: 618–752) feral burros within the surveyed area, but these are part of a much larger population that is not geographically isolated from those in the survey area. Sighting probabilities ranged from 0.19–0.98 and were most strongly influenced by distance from observer and group size. We estimated age-specific demographic rates at the NTC and compiled mean rates across burro populations in arid environments from the literature. Mean fecundity varied from 0.17 to 0.58 foals per adult female with younger females having lower fecundity. Mean survival was 0.90 for foals, 0.98 for yearlings, and 0.96 for adults. PZP vaccine treatment strategies that suppressed fertility for up to 10 years, predicted that burro abundance would be reduced by 67–88% after 15 years (compared with no treatment), but none of these strategies resulted in population extirpation. Our fieldwork also highlights the difficulty of administering PZP vaccination to large, free-ranging animals. Burro growth rates shifted from increasing to decreasing at adult survival rates below 0.84 and the population was predicted to become extirpated when adult survival declined below 0.60. In the absence of other methods to reduce burro numbers, our findings indicate that current formulations of PZP immunocontraception, which require multiple doses, would be inadequate for controlling population growth rates at the NTC and perhaps elsewhere. Development of longer-term fertility reduction agents and/or more efficient vaccine delivery techniques would likely improve the efficacy of fertility control for overabundant ungulate populations. Lack of geographic closure (physical barriers to migration) further complicates management efforts to reduce burro numbers.

California↗

USGS2020

Reptiles under the conservation umbrella of the greater sage‐grouse

In conservation paradigms, management actions for umbrella species also benefit co‐occurring species because of overlapping ranges and similar habitat associations. The greater sage‐grouse ( Centrocercus urophasianus ) is an umbrella species because it occurs across vast sagebrush ecosystems of western North America and is the recipient of extensive habitat conservation and restoration efforts that might benefit sympatric species. Biologists' understanding of how non‐target species might benefit from sage‐grouse conservation is, however, limited. Reptiles, in particular, are of interest in this regard because of their relatively high diversity in shrublands and grasslands where sage‐grouse are found. Using spatial overlap of species distributions, land cover similarity statistics, and a literature review, we quantified which reptile species may benefit from the protection of intact sage‐grouse habitat and which may be affected by recent (since about 1990) habitat restoration actions targeting sage‐grouse. Of 190 reptile species in the United States and Canadian provinces where greater sage‐grouse occur, 70 (37%) occur within the range of the bird. Of these 70 species, about a third (11 snake and 11 lizard species) have >10% of their distribution area within the sage‐grouse range. Land cover similarity indices revealed that 14 of the 22 species (8 snake and 6 lizard species) had relatively similar land cover associations to those of sage‐grouse, suggesting greater potential to be protected under the sage‐grouse conservation umbrella and greater potential to be affected, either positively or negatively, by habitat management actions intended for sage‐grouse. Conversely, the remaining 8 species are less likely to be protected because of less overlap with sage‐grouse habitat and thus uncertain effects of sage‐grouse habitat management actions. Our analyses of treatment databases indicated that from 1990 to 2014 there were at least 6,400 treatments implemented on public land that covered approximately 4 million ha within the range of the sage‐grouse and, of that, >1.5 million ha were intended to at least partially benefit sage‐grouse. Whereas our results suggest that conservation of intact sagebrush vegetation communities could benefit ≥14 reptiles, a greater number than previously estimated, additional research on each species' response to habitat restoration actions is needed to assess broader claims of multi‐taxa benefits when it comes to manipulative sage‐grouse habitat management. Published 2020. This article is a U.S. Government work and is in the public domain in the USA.

Idaho, Montana↗

USGS2021

Feral horse space use and genetic characteristics from fecal DNA

Feral horses ( Equus ferus caballus ) in the western United States are managed by the Bureau of Land Management (BLM) and United States Forest Service in designated areas on public lands with a goal of maintaining populations in balance with multiple uses of the landscape. Small, isolated populations can be at risk of extirpation from stochastic events and deleterious genetic effects resulting from inbreeding and reduced heterozygosity. The genetic diversity of feral horse herds is periodically monitored using blood or hair samples collected during management gathers (i.e., occasions when the herd is rounded up). We conducted a study to examine genetic characteristics of the feral horse population at the BLM Little Book Cliffs Herd Management Area (HMA) in Colorado, USA, using non-invasively collected fecal samples. Additionally, we explored whether genotypes could be used to document space use and potential sub-population development. We used a random sampling scheme, walking transects in sampling areas covering most of the HMA to find and collect fecal samples of all ages, except those that were deteriorating. We collected >1,800 fecal samples from across the study area in May, August, and October 2014. We then identified unique individuals using a suite of microsatellite loci. Our estimates of genetic diversity from fecal samples were higher than those reported from blood and hair samples taken during recent horse gathers, likely because our sample size and spatial distribution was larger. Genotypes revealed that some individuals were found only in certain parts of the study area and at a higher proportion than random; thus, they could be considered residents in those sampling areas. Using discriminant function analyses, we detected 5 genetic groups in the sample population, but these did not correspond to individuals in specific parts of the study area. Our results support the use of fecal DNA to augment direct observations of horse presence and could be used to detect habitat use and areas of high density. Non-invasive techniques such as fecal DNA sampling can help managers decide whether new individuals need to be translocated to a closed population to maintain genetic diversity without the human safety and animal welfare concerns associated with gathers and invasive techniques.

Colorado↗

USGS2018

Grizzly bear depredation on grazing allotments in the Yellowstone ecosystem

Grizzly bear (Ursus arctos) conflicts with humans, including livestock depredation on public land grazing allotments, have increased during the last several decades within the Greater Yellowstone Ecosystem (GYE) in the western United States as the grizzly bear population has grown in number and occupied range. Minimizing conflicts and improving conservation efficacy requires information on the relationships between livestock depredations, allotment management, grizzly bear habitat conditions, and their interactions. We used generalized linear mixed models to evaluate spatio-temporal relationships between grizzly bear depredation of livestock and the characteristics of 316 United States Department of Agriculture Forest Service and National Park Service grazing allotments in the GYE during 1992–2014. We evaluated relationships at 2 spatial extents, representing daily and annual grizzly bear activity areas. During the study period, more grazing allotments became occupied by grizzly bears and most livestock depredations were associated with these areas of population expansion. Number of livestock (beta = 1.15 +/- 0.19 [SE]) and grizzly bear density index (beta = 1.13 +/- 0.10) had the greatest effects on the number of livestock depredation events relative to other allotment attributes. Estimated number of depredation events increased by approximately 20% when cow-calf pairs increased by 100 pairs and grizzly bear density index increased by 1 bear/196 km2 (the average annual home-range size of a female grizzly bear in the GYE). Additionally, grazing allotment size was positively related to the number of depredation events (beta = 0.56 +/- 0.16), whereas the presence of bull cattle or horses was associated with an approximately 50% reduction in depredations (beta = -0.71 +/- 0.37). Livestock depredation events were greater for allotments with lower road density (beta = -0.89 +/- 0.28), less rugged terrain (beta = -0.57 +/- 0.25), higher vegetative primary productivity (beta = 0.33 +/- 0.16), and more whitebark pine coverage (beta = 0.30 +/- 0.15). Relationships between depredations and grizzly bear habitat conditions varied across spatial extents. As the grizzly bear population continues to expand, natural resource managers and livestock producers could focus efforts on allotments with a higher density of grizzly bears, fewer roads, and quality grizzly bear habitat, including higher vegetative productivity, when developing cooperative management plans and preventative measures to reduce the likelihood of depredation. The perspectives gained from our analysis provide context for long-term, landscape-level planning to accommodate livestock production on public lands while meeting conservation goals for grizzly bears.

Idaho, Montana, Wyoming↗

USGS2015

Intra-annual patterns in adult band-tailed pigeon survival estimates

Context: The band-tailed pigeon ( Patagioenas fasciata ) is a migratory species occurring in western North America with low recruitment potential and populations that have declined an average of 2.4% per year since the 1960s. Investigations into band-tailed pigeon demographic rates date back to the early 1900s, and existing annual survival rate estimates were derived in the 1970s using band return data. Aims: The primary purpose of the paper was to demonstrate that the apparent paradox between band-tailed pigeon population dynamics (long-term steady decline) and breeding season survival rates (very high) can be explained by changes in survival probability during the remainder of the year. Methods: We trapped Pacific coast band-tailed pigeons during two separate periods: we equipped pigeons with very high frequency (VHF) radio-transmitters in 1999–2000 (1999 = 20; 2000 = 34); and outfitted pigeons with solar powered platform transmitting terminal (PTT) transmitters in 2006–08 (n = 20). We used known fate models to estimate annual survival rates and seasonal survival variation among four periods based on an annual behavioural cycle based on phenological events (nesting, autumn migration, winter and spring migrations). We used model averaged parameter estimates to account for model selection uncertainty. Key results: Neither body condition nor sex were associated with variation in band-tailed pigeon survival rates. Weekly survival during the nesting season did not differ significantly between VHF-marked (0.996; CI = 0.984–0.999) and PTT-marked pigeons (0.998; CI = 0.990–1.00). Model averaged annual survival of PTT-marked pigeons was 0.682 (95% CI = 0.426–0.861) and was similar to annual survival estimated in previous studies using band return data. Survival probability was lowest during both migration periods and highest during the nesting period. Conclusions: Our survival estimates are consistent with those of prior studies and suggest that mortality risk is greatest during migration. Weekly survival probability during winter was nearly the same as during the nesting season; however, winter was the longest period and survival throughout winter was lower than other seasons. Implications: We present the first inter-seasonal analysis of survival probability of the Pacific coast race of band-tailed pigeons and illustrate important temporal patterns that may influence future species management including harvest strategies and disease monitoring.

Wildlife Research↗

USGS2012

Greater sage-grouse winter habitat use on the eastern edge of their range

Greater sage-grouse (Centrocercus urophasianus) at the western edge of the Dakotas occur in the transition zone between sagebrush and grassland communities. These mixed sagebrush (Artemisia sp.) and grasslands differ from those habitats that comprise the central portions of the sage-grouse range; yet, no information is available on winter habitat selection within this region of their distribution. We evaluated factors influencing greater sage-grouse winter habitat use in North Dakota during 2005–2006 and 2006–2007 and in South Dakota during 2006–2007 and 2007–2008. We captured and radio-marked 97 breeding-age females and 54 breeding-age males from 2005 to 2007 and quantified habitat selection for 98 of these birds that were alive during winter. We collected habitat measurements at 340 (177 ND, 163 SD) sage-grouse use sites and 680 random (340 each at 250 m and 500 m from locations) dependent sites. Use sites differed from random sites with greater percent sagebrush cover (14.75% use vs. 7.29% random; P < 0.001), percent total vegetation cover (36.76% use vs. 32.96% random; P ≤ 0.001), and sagebrush density (2.12 plants/m 2 use vs. 0.94 plants/m 2 random; P ≤ 0.001), but lesser percent grass cover (11.76% use vs. 16.01% random; P ≤ 0.001) and litter cover (4.34% use vs. 5.55% random; P = 0.001) and lower sagebrush height (20.02 cm use vs. 21.35 cm random; P = 0.13) and grass height (21.47 cm use vs. 23.21 cm random; P = 0.15). We used conditional logistic regression to estimate winter habitat selection by sage-grouse on continuous scales. The model sagebrush cover + sagebrush height + sagebrush cover × sagebrush height (w i = 0.60) was the most supported of the 13 models we considered, indicating that percent sagebrush cover strongly influenced selection. Logistic odds ratios indicated that the probability of selection by sage-grouse increased by 1.867 for every 1% increase in sagebrush cover (95% CI = 1.627–2.141) and by 1.041 for every 1 cm increase in sagebrush height (95% CI = 1.002–1.082). The interaction between percent sagebrush canopy cover and sagebrush height (β = −0.01, SE ≤ 0.01; odds ratio = 0.987 [95% CI = 0.983–0.992]) also was significant. Management could focus on avoiding additional loss of sagebrush habitat, identifying areas of critical winter habitat, and implementing management actions based on causal mechanisms (e.g., soil moisture, precipitation) that affect sagebrush community structure in this region.

Journal of Wildlife Management↗

USGS1996

Detailed study of water quality, bottom sediment, and biota associated with irrigation drainage in the Klamath Basin, California and Oregon, 1990-92

The effect of irrigation drainage on the water quality and wildlife of the Klamath Basin in California and Oregon was evaluated during 1990-92 as part of the National Irrigation Water Quality Program of the U.S. Department of the Interior. The study focused on land serviced by the Bureau of Reclamation Klamath Project, which supplies irrigation water to agricultural land in the Klamath Basin and the Lost River Basin. The Tule Lake and Lower Klamath National Wildlife Refuges, managed by the U.S. Fish and Wildlife Service, are in the study area. These refuges provide critical resting and breeding habitat for waterfowl on the Pacific flyway and are dependent on irrigation drainwater from upstream agriculture for most of their water supply. Water-quality characteristics throughout the study area were typical of highly eutrophic systems during the summer months of 1991 and 1992. Dissolved-oxygen concentrations and pH tended to fluctuate each day in response to diurnal patterns of photosynthesis, and frequently exceeded criteria for protection of aquatic organisms. Nitrogen and phosphorus concentrations were generally at or above threshold levels characteristic of eutrophic lakes and streams. At most sites the bulk of dissolved nitrogen was organically bound. Elevated ammonia concentrations were common in the study area, especially downstream of drain inputs. High pH of water increased the toxicity of ammonia, and concentrations exceeded criteria at sites upstream and downstream of irrigated land. Concentrations of ammonia in samples from small drains on the Tule Lake refuge leaseland were higher than those measured in the larger, integrating drains at primary monitoring sites. The mean ammonia concentration in leaseland drains [1.21 milligrams per liter (mg/L)] was significantly higher than the mean concentration in canals delivering water to the leaseland fields (0.065 mg/L) and higher than concentrations reported to be lethal to Daphnia magna (median lethal concentration of 0.66 mg/L). Dissolved-oxygen concentrations also were lower, and Daphnia survivability measured during in situ bioassays was correspondingly lower in the leaseland drains than in water delivery canals. In static laboratory bioassays, water samples collected at the primary monitoring sites caused toxicity in up to 78 percent of Lemna minor tests, in up to 49 percent of Xenopus laevis tests, in 17 percent and 8 percent of Hyalella azteca and Pimephales promelas tests, respectively, and 0 percent in Daphnia magna tests. In situ exposure at the sites caused mortality in more than 83 percent of Pimephales tests and in more than 41 percent of Daphnia and Hyalella tests. Much of the observed toxicity appears to have been caused by low dissolved oxygen, high pH, and ammonia. Although water in the study area was toxic to a variety of organisms, no statistically significant differences in the degree of toxicity between sites were observed above or below irrigated agricultural land in any of the bioassays. Pesticides were frequently detected in water samples collected at the monitoring sites during the 1991 and 1992 irrigation seasons. Among the most frequently detected compounds were the herbicides simazine, metribuzin, EPTC, and metolachlor and the insecticide terbufos. All the insecticides detected were at concentrations substantially below acute toxicity values reported for aquatic organisms. The herbicide acrolein has been used extensively in the basin to manage aquatic plant growth in irrigation canals and drains. The concentration of acrolein was monitored in a canal near Tule Lake after an application in order to evaluate the potential for the pesticide to be transported to refuge waters. Although acrolein concentrations were toxic to fish in the channels adjacent to Tule Lake, very little of the canal water entered the refuge during the monitoring period. Organochlorine pesticide concentrations in 25 surficial sediment samples collected in 1990 were below baseline levels commonly found in soils and sediment. Seventeen sediment samples were analyzed for chlorophenoxy acid herbicides and two samples were analyzed for organophosphorus and carbamate insecticides in 1992. No pesticides were detected in any of these samples. Residues of the trace elements selenium, mercury, and arsenic in algae, invertebrates, fish, and avian eggs revealed no bioaccumulation problems. Concentrations of organochlorine compounds, especially of p,p' DDE, were associated with a mean 11-percent eggshell thinning in white-faced ibis. However, ibis populations appear to be increasing, and some eggs of ibis were relatively low in DDE concentration. DDE concentrations in eggs of western grebes were not as high as in the eggs of ibis. Concentrations and types of organochlorine compounds detected in grebe and ibis eggs were highly variable, indicating that the birds were exposed to these compounds outside the basin. Fish and invertebrates inhabiting drainwater were representative of pollution-tolerant species assemblages. The aquatic communities retained little of their historic ecological structure. Extensive hydrologic modifications and hypereutrophic conditions in Klamath Basin waterways have degraded the quality of aquatic habitat and altered aquatic communities.

California, Oregon↗