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At least 739 records · Page 41Linked to original sources
USGS2018

Degradation of 100‐m‐scale rocky ejecta craters at the InSight Landing Site on Mars and implications for surface processes and erosion rates in the hesperian and amazonian

Rocky ejecta craters (RECs) at the Interior Exploration using Seismic Investigations, Geodesy and Heat Transport (InSight) landing site on Elysium Planitia, Mars, provide constraints on crater modification and rates for the Hesperian and Amazonian. The RECs are between 10 m and 1.2 km in diameter and exhibit five classes of preservation. Class 1 represents pristine craters with sharp rims and abundant ejected rocks. From Classes 2 to 5, rims become more subdued, craters are infilled, and the ejecta become discontinuously distributed. High‐Resolution Imaging Science Experiment digital elevation models indicate a maximum depth to diameter ratio of ~0.15, which is lower than pristine models for craters of similar size. The low ratio is related to the presence of a loosely consolidated regolith and early‐stage eolian infill. Rim heights have an average height to diameter ratio of ~0.03 for the most pristine class. The size‐frequency distribution of RECs, plotted using cumulative and differential methods, indicates that crater classes within the diameter range of 200 m to 1.2 km are separated by ~100 to 200 Myr. Smaller craters degrade faster, with classes separated by <100 Myr. Rim erosion can be entirely modeled by nonlinear diffusional processes using the calculated timescales and a constant diffusivity of 8 × 10 −7 m 2 /year for craters 200 to 500 m in diameter. Diffusion models only partly capture depth‐related degradation, which requires eolian infill. Depth degradation and rim erosion rates are 10 −2 to 10 −3 m/Myr, respectively. The rates are consistent with relatively slow modification that is typical of the last two epochs of Martian history.

Journal of Geophysical Research - Planets↗
USGS2021

Palaeoceanographic changes in the late Pliocene promoted rapid diversification in pelagic seabirds

Aim Palaeoceanographic changes can act as drivers of diversification and speciation, even in highly mobile marine organisms. Shearwaters are a group of globally distributed and highly mobile pelagic seabirds. Despite a recent well-resolved phylogeny, shearwaters have controversial species limits, and show periods of both slow and rapid diversification. Here, we explore the role of palaeoceanographic changes on shearwaters' diversification and speciation. We investigate shearwater biogeography and the evolution of a key phenotypic trait, body size, and we assess the validity of their current taxonomy. Location Worldwide. Taxa Shearwaters (Order Procellariiformes, Family Procellariidae, Genera Ardenna , Calonectris and Puffinus ). Methods We generated genomic (ddRAD) data to infer a time-calibrated species tree for the shearwaters. We estimated ancestral ranges and evaluated the roles of founder events, vicariance and surface ocean currents in driving diversification. We performed phylogenetic generalised least squares to identify potential predictors of variability in body size along the phylogeny. To assess the validity of the current taxonomy, we analysed genomic patterns of recent shared ancestry and differentiation among shearwater taxa. Results We identified a period of high dispersal and rapid speciation during the Late Pliocene–early Pleistocene. Species dispersal appears to be favoured by surface ocean currents, and founder events are supported as the main mode of speciation in these highly mobile pelagic seabirds. Body mass shows significant associations with life strategies and local conditions. The current taxonomy shows some incongruences with the patterns of genomic divergence. Main Conclusions A reduction of neritic areas during the Pliocene seems to have driven global extinctions of shearwater species, followed by a subsequent burst of speciation and dispersal probably promoted by Plio-Pleistocene climatic shifts. Our findings extend our understanding on the drivers of speciation and dispersal of highly mobile pelagic seabirds and shed new light on the important role of palaeoceanographic events.

Journal of Biogeography↗
USGS2006

Winter habitat selection of mule deer before and during development of a natural gas field

Increased levels of natural gas exploration, development, and production across the Intermountain West have created a variety of concerns for mule deer (Odocoileus hemionus) populations, including direct habitat loss to road and well-pad construction and indirect habitat losses that may occur if deer use declines near roads or well pads. We examined winter habitat selection patterns of adult female mule deer before and during the first 3 years of development in a natural gas field in western Wyoming. We used global positioning system (GPS) locations collected from a sample of adult female mule deer to model relative frequency or probability of use as a function of habitat variables. Model coefficients and predictive maps suggested mule deer were less likely to occupy areas in close proximity to well pads than those farther away. Changes in habitat selection appeared to be immediate (i.e., year 1 of development), and no evidence of well-pad acclimation occurred through the course of the study; rather, mule deer selected areas farther from well pads as development progressed. Lower predicted probabilities of use within 2.7 to 3.7 km of well pads suggested indirect habitat losses may be substantially larger than direct habitat losses. Additionally, some areas classified as high probability of use by mule deer before gas field development changed to areas of low use following development, and others originally classified as low probability of use were used more frequently as the field developed. If areas with high probability of use before development were those preferred by the deer, observed shifts in their distribution as development progressed were toward less-preferred and presumably less-suitable habitats.

Journal of Wildlife Management↗
USGS2003

Athena Mars rover science investigation

Each Mars Exploration Rover carries an integrated suite of scientific instruments and tools called the Athena science payload. The primary objective of the Athena science investigation is to explore two sites on the Martian surface where water may once have been present, and to assess past environmental conditions at those sites and their suitability for life. The remote sensing portion of the payload uses a mast called the Pancam Mast Assembly (PMA) that provides pointing for two instruments: the Panoramic Camera (Pancam), and the Miniature Thermal Emission Spectrometer (Mini-TES). Pancam provides high-resolution, color, stereo imaging, while Mini-TES provides spectral cubes at mid-infrared wavelengths. For in-situ study, a five degree-of-freedom arm called the Instrument Deployment Device (IDD) carries four more tools: a Microscopic Imager (MI) for close-up imaging, an Alpha Particle X-Ray Spectrometer (APXS) for elemental chemistry, a Mo??ssbauer Spectrometer (MB) for the mineralogy of Fe-bearing materials, and a Rock Abrasion Tool (RAT) for removing dusty and weathered surfaces and exposing fresh rock underneath. The payload also includes magnets that allow the instruments to study the composition of magnetic Martian materials. All of the Athena instruments have undergone extensive calibration, both individually and using a set of geologic reference materials that are being measured with all the instruments. Using a MER-like rover and payload in a number of field settings, we have devised operations processes that will enable us to use the MER rovers to formulate and test scientific hypotheses concerning past environmental conditions and habitability at the landing sites. Copyright 2003 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗
USGS2006

Prediction of summer maximum and minimum temperature over the central and western United States: The roles of soil moisture and sea surface temperature

A statistical model based on canonical correlation analysis (CCA) was used to explore climatic associations and predictability of June–August (JJA) maximum and minimum surface air temperatures (Tmax and Tmin) as well as the frequency of Tmax daily extremes (Tmax90) in the central and western United States (west of 90°W). Explanatory variables are monthly and seasonal Pacific Ocean SST (PSST) and the Climate Division Palmer Drought Severity Index (PDSI) during 1950–2001. Although there is a positive correlation between Tmax and Tmin, the two variables exhibit somewhat different patterns and dynamics. Both exhibit their lowest levels of variability in summer, but that of Tmax is greater than Tmin. The predictability of Tmax is mainly associated with local effects related to previous soil moisture conditions at short range (one month to one season), with PSST providing a secondary influence. Predictability of Tmin is more strongly influenced by large-scale (PSST) patterns, with PDSI acting as a short-range predictive influence. For both predictand variables (Tmax and Tmin), the PDSI influence falls off markedly at time leads beyond a few months, but a PSST influence remains for at least two seasons. The maximum predictive skill for JJA Tmin, Tmax, and Tmax90 is from May PSST and PDSI. Importantly, skills evaluated for various seasons and time leads undergo a seasonal cycle that has maximum levels in summer. At the seasonal time frame, summer Tmax prediction skills are greatest in the Midwest, northern and central California, Arizona, and Utah. Similar results were found for Tmax90. In contrast, Tmin skill is spread over most of the western region, except for clusters of low skill in the northern Midwest and southern Montana, Idaho, and northern Arizona.

Western United States↗
USGS2013

Food availability and foraging near human developments by black bears

Understanding the relationship between foraging ecology and the presence of human-dominated landscapes is important, particularly for American black bears ( Ursus americanus ), which sometimes move between wildlands and urban areas to forage. The food-related factors influencing this movement have not been explored, but can be important for understanding the benefits and costs to black bear foraging behavior and the fundamental origins of bear conflicts. We tested whether the scarcity of wildland foods or the availability of urban foods can explain when black bears forage near houses, examined the extent to which male bears use urban areas in comparison to females, and identified the most important food items influencing bear movement into urban areas. We monitored 16 collared black bears in and around Missoula, Montana, during 2009 and 2010, while quantifying the rate of change in green vegetation and the availability of 5 native berry-producing species outside the urban area, the rate of change in green vegetation, and the availability of apples and garbage inside the urban area. We used parametric time-to-event models in which an event was a bear location collected within 100 m of a house. We also visited feeding sites located near houses and quantified food items bears had eaten. The probability of a bear being located near a house was 1.6 times higher for males, and increased during apple season and the urban green-up. Fruit trees accounted for most of the forage items at urban feeding sites (49%), whereas wildland foods composed <10%. Black bears foraged on human foods near houses even when wildland foods were available, suggesting that the absence of wildland foods may not influence the probability of bears foraging near houses. Additionally, other attractants, in this case fruit trees, appear to be more important than the availability of garbage in influencing when bears forage near houses.

Montana↗
USGS2003

Inferences on the hydrothermal system beneath the resurgent dome in Long Valley Caldera, east-central California, USA, from recent pumping tests and geochemical sampling

Quaternary volcanic unrest has provided heat for episodic hydrothermal circulation in the Long Valley caldera, including the present-day hydrothermal system, which has been active over the past 40 kyr. The most recent period of crustal unrest in this region of east-central California began around 1980 and has included periods of intense seismicity and ground deformation. Uplift totaling more than 0.7 m has been centered on the caldera's resurgent dome, and is best modeled by a near-vertical ellipsoidal source centered at depths of 6-7 km. Modeling of both deformation and microgravity data now suggests that (1) there are two inflation sources beneath the caldera, a shallower source 7-10 km beneath the resurgent dome and a deeper source ???15 km beneath the caldera's south moat and (2) the shallower source may contain components of magmatic brine and gas. The Long Valley Exploration Well (LVEW), completed in 1998 on the resurgent dome, penetrates to a depth of 3 km directly above this shallower source, but bottoms in a zone of 100??C fluid with zero vertical thermal gradient. Although these results preclude extrapolations of temperatures at depths below 3 km, other information obtained from flow tests and fluid sampling at this well indicates the presence of magmatic volatiles and fault-related permeability within the metamorphic basement rocks underlying the volcanic fill. In this paper, we present recently acquired data from LVEW and compare them with information from other drill holes and thermal springs in Long Valley to delineate the likely flow paths and fluid system properties under the resurgent dome. Additional information from mineralogical assemblages in core obtained from fracture zones in LVEW documents a previous period of more vigorous and energetic fluid circulation beneath the resurgent dome. Although this system apparently died off as a result of mineral deposition and cooling (and/or deepening) of magmatic heat sources, flow testing and tidal analyses of LVEW water level data show that relatively high permeability and strain sensitivity still exist in the steeply dipping principal fracture zone penetrated at a depth of 2.6 km. The hydraulic properties of this zone would allow a pressure change induced at distances of several kilometers below the well to be observable within a matter of days. This indicates that continuous fluid pressure monitoring in the well could provide direct evidence of future intrusions of magma or high-temperature fluids at depths of 5-7 km. ?? 2003 Elsevier B.V. All rights reserved.

California↗
USGS2012

Patterns and controlling factors of species diversity in the Arctic Ocean

Aim The Arctic Ocean is one of the last near-pristine regions on Earth, and, although human activities are expected to impact on Arctic ecosystems, we know very little about baseline patterns of Arctic Ocean biodiversity. This paper aims to describe Arctic Ocean-wide patterns of benthic biodiversity and to explore factors related to the large-scale species diversity patterns. Location Arctic Ocean. Methods We used large ostracode and foraminiferal datasets to describe the biodiversity patterns and applied comprehensive ecological modelling to test the degree to which these patterns are potentially governed by environmental factors, such as temperature, productivity, seasonality, ice cover and others. To test environmental control of the observed diversity patterns, subsets of samples for which all environmental parameters were available were analysed with multiple regression and model averaging. Results Well-known negative latitudinal species diversity gradients (LSDGs) were found in metazoan Ostracoda, but the LSDGs were unimodal with an intermediate maximum with respect to latitude in protozoan foraminifera. Depth species diversity gradients were unimodal, with peaks in diversity shallower than those in other oceans. Our modelling results showed that several factors are significant predictors of diversity, but the significant predictors were different among shallow marine ostracodes, deep-sea ostracodes and deep-sea foraminifera. Main conclusions On the basis of these Arctic Ocean-wide comprehensive datasets, we document large-scale diversity patterns with respect to latitude and depth. Our modelling results suggest that the underlying mechanisms causing these species diversity patterns are unexpectedly complex. The environmental parameters of temperature, surface productivity, seasonality of productivity, salinity and ice cover can all play a role in shaping large-scale diversity patterns, but their relative importance may depend on the ecological preferences of taxa and the oceanographic context of regions. These results suggest that a multiplicity of variables appear to be related to community structure in this system.

Journal of Biogeography↗
USGS2018

Macroecological patterns of sexual size dimorphism in turtles of the world

Sexual size dimorphism (SSD) is a well-documented phenomenon in both plants and animals; however, the ecological and evolutionary mechanisms that drive and maintain SSD patterns across geographic space at regional and global scales are understudied, especially for reptiles. Our goal was to examine geographic variation of turtle SSD and to explore ecological and environmental correlates using phylogenetic comparative methods. We use published body size data on 135 species from nine turtle families to examine how geographic patterns and the evolution of SSD are influenced by habitat specialization, climate (annual mean temperature and annual precipitation) and climate variability, latitude, or a combination of these predictor variables. We found that geographic variation, magnitude and direction of turtle SSD are best explained by habitat association, annual temperature variance and annual precipitation. Use of semi-aquatic and terrestrial habitats was associated with male-biased SSD, whereas use of aquatic habitat was associated with female-biased SSD. Our results also suggest that greater temperature variability is associated with female-biased SSD. In contrast, wetter climates are associated with male-biased SSD compared with arid climates that are associated with female-biased SSD. We also show support for a global latitudinal trend in SSD, with females being larger than males towards the poles, especially in the families Emydidae and Geoemydidae. Estimates of phylogenetic signal for both SSD and habitat type indicate that closely related species occupy similar habitats and exhibit similar direction and magnitude of SSD. These global patterns of SSD may arise from sex-specific reproductive behaviour, fecundity and sex-specific responses to environmental factors that differ among habitats and vary systematically across latitude. Thus, this study adds to our current understanding that while SSD can vary dramatically across and within turtle species under phylogenetic constraints, it may be driven, maintained and exaggerated by habitat type, climate and geographic location.

Journal of Evolutionary Biology↗
USGS2002

Evaluation of canoe surveys for anurans along the Rio Grande in Big Bend National Park, Texas

Surveys for amphibians along large rivers pose monitoring and sampling problems. We used canoes at night to spotlight and listen for anurans along four stretches of the Rio Grande in Big Bend National Park, Texas, in 1998 and 1999. We explored temporal and spatial variation in amphibian counts and species richness and assessed relationships between amphibian counts and environmental variables, as well as amphibian-habitat associations along the banks of the Rio Grande. We documented seven anuran species, but Rio Grande leopard frogs ( Rana berlandieri ) accounted for 96% of the visual counts. Chorus surveys along the river detected similar or fewer numbers of species, but orders of magnitude fewer individuals compared to visual surveys. The number of species varied on average by 37% across monthly and nightly surveys. We found similar average coefficients of variation in counts of Rio Grande leopard frogs on monthly and nightly bases (CVs = 42–44%), suggesting that canoe surveys are a fairly precise technique for counts of this species. Numbers of Rio Grande leopard frogs observed were influenced by river gage levels and air and water temperatures, suggesting that surveys should be conducted under certain environmental conditions to maximize counts and maintain consistency. We found significant differences in species richness and bullfrog ( Rana catesbeiana ) counts among the four river stretches. Four rare anuran species were found along certain stretches but not others, which could represent either sampling error or unmeasured environmental or habitat differences among the river stretches. We found a greater association of Rio Grande leopard frogs with mud banks compared to rock or cliff (canyon) areas and with seepwillow and open areas compared to giant reed and other vegetation types. Canoe surveys appear to be a useful survey technique for anurans along the Rio Grande and may work for other large river systems as well.

Texas↗
USGS2019

Microbial associations of four species of algal symbiont-bearing Foraminifers from the Florida Reef Tract, USA

While microbiome research is a rapidly expanding field of study, relatively little is known of the microbiomes associated with Foraminifera. This preliminary study investigated microbes associated with four species of Foraminifera, representing two taxonomic orders, which host three kinds of algal endosymbionts. A major objective was to explore potential influences on the microbiome composition, including phylogenetic relatedness among the host species, similarities in algal symbionts hosted, and environmental conditions from which the specimens were collected. Samples examined from two locations along the middle Florida Keys reef tract included 45 foraminiferal specimens and four environmental samples. Bacterial DNA extraction from individual specimens was followed by amplification and amplicon sequencing of the V4 variable region of the 16S rRNA gene; results were obtained from 21 specimens. The Order Miliolida, Family Soritidae, was represented by 5–8 specimens of each of three species: Archaias angulatus and Cyclorbiculina compressa , which both host chlorophyte symbionts, and Sorites orbiculus , which hosts dinoflagellate symbionts. Three Ar. angulatus specimens from which the microbiome was successfully sequenced shared 177 OTUs. Six C. compressa specimens successfully sequenced shared 58 OTUs, of which 31 were also shared by the three specimens of Ar. angulatus . Four successfully sequenced S. orbiculus specimens shared 717 unique OTUs. The 13 soritid specimens shared 26 OTUs, 23 of which represented Proteobacteria, predominantly of the bacterial family Rhodobacteraceae. The fourth foraminiferal species, Amphistegina gibbosa (Order Rotaliida) hosts diatom endosymbionts. Bacterial DNA extraction was attempted on 16 Am. gibbosa , including both normal-appearing and partly-bleached specimens. Only six OTUs, four of which represented Proteobacteria, were found in all eight specimens successfully sequenced. The partly bleached specimens shared nearly twice as many unique microbial OTUs (32) as the normal-appearing specimens (19). All Am. gibbosa specimens shared only four microbial OTUs with the soritid species, three of which may have been contaminants, indicating minimal commonality between the microbiomes of Am. gibbosa and the soritid taxa.

Florida↗
USGS1991

A geochemical model of the Platanares geothermal system, Honduras

Results of exploration drilling combined with results of geologic, geophysical, and hydrogeochemical investigations have been used to construct a geochemical model of the Platanares geothermal system, Honduras. Three coreholes were drilled, two of which produced fluids from fractured Miocene andesite and altered Cretaceous to Eocene conglomerate at 450 to 680 m depth. Large volume artesian flows of 160-165??C, predominantly bicarbonate water are chemically similar to, but slightly less saline than widespread boiling hot-spring waters. The chemistry of the produced fluid is dominated by equilibrium reactions in sedimentary rocks at greater depths and higher temperatures than those measured in the wells. Chemical, isotope, and gas geothermometers indicate a deep fluid temperature of 200-245??C and reflect a relatively short residence time in the fractures feeding the wells. Chloride-enthalpy relations as well as isotopic and chemical compositions of well discharges, thermal springs, and local cold waters support a conceptual model of ascending high-temperature (minimum 225??C) parent fluid that has cooled conductively to form the 160-165??C shallow (to 680 m) fluid encountered by the wells. The hot-spring waters are formed by boiling and steam loss from more or less conductively cooled parent fluid. The more dilute boiling spring waters (Cl = ???32 mg/kg) have cooled from > 225??C to about 160??C by conduction and from 160??C to 98??C by boiling. The most concentrated boiling spring waters (Cl = 37 mg/kg) have cooled from > 225??C to about 200??C by conduction and from 200??C to 98??C by boiling. Intermediate concentrations reflect mixed cooling paths. ?? 1991.

Journal of Volcanology and Geothermal Research↗
USGS2022

Tracking the desert's edge with a Pleistocene relict

In addition to the Sky Islands of the southwestern U.S. and northwestern Mexico, a series of 900–1200 m desert peaks surrounded by arid lowlands support temperate affiliated species at their summits. The presence of disjunct long-lived plant taxa on under-explored desert mountains, especially Isla Tiburón at 29° latitude in the Gulf of California, suggests a more southerly extent of Ice Age woodlands than previously understood. The phylogeography of the desert edge species Canotia holacantha (Celastraceae) was investigated to test the hypothesis that insular desert peak populations represent remnants of Pleistocene woodlands rather than recent dispersal events. Sequences of four chloroplast DNA regions totaling 2032 bp were amplified from 74 individuals of 14 populations across the entire range of C. holacantha as well as nine individuals that represented the other two species in its clade ( C. wendtii and Acanthothamnus aphyllus ) and two outgroups. Results suggest that a Canotia common ancestor occurred on the landscape, which underwent a population contraction ca. 15 kya. The Isla Tiburón C. holacantha population and the Chihuahuan Desert microendemic C. wendtii have the greatest genetic differentiation, are sister to one another, and basal to all other Canotia populations. Three haplotypes within C. holacantha were recovered, which correspond to regional geography and thus identified as the Arizona, Sonora, and Tiburón haplotypes, within which Acanthothamnus aphyllus is nested rather than as a sister genus. These results indicate a once broad distribution of Canotia / Acanthothamnus when the current peripheral desert ecotone habitat was more widespread during the Pleistocene, now present in relict populations on the fringes of the southern desert, in the Chihuahuan Desert, with scattered populations on desert peaks, and a common or abundant distribution at the northern boundary of the Sonoran Desert. These results suggest Canotia has tracked the shift of the desert's edge both in latitude and elevation since the end of the last Ice Age.

Journal of Arid Environments↗
USGS2003

Athena Microscopic Imager investigation

The Athena science payload on the Mars Exploration Rovers (MER) includes the Microscopic Imager (MI). The MI is a fixed‐focus camera mounted on the end of an extendable instrument arm, the Instrument Deployment Device (IDD). The MI was designed to acquire images at a spatial resolution of 30 microns/pixel over a broad spectral range (400–700 nm). The MI uses the same electronics design as the other MER cameras but has optics that yield a field of view of 31 × 31 mm across a 1024 × 1024 pixel CCD image. The MI acquires images using only solar or skylight illumination of the target surface. A contact sensor is used to place the MI slightly closer to the target surface than its best focus distance (about 66 mm), allowing concave surfaces to be imaged in good focus. Coarse focusing (∼2 mm precision) is achieved by moving the IDD away from a rock target after the contact sensor has been activated. The MI optics are protected from the Martian environment by a retractable dust cover. The dust cover includes a Kapton window that is tinted orange to restrict the spectral bandpass to 500–700 nm, allowing color information to be obtained by taking images with the dust cover open and closed. MI data will be used to place other MER instrument data in context and to aid in petrologic and geologic interpretations of rocks and soils on Mars.

Journal of Geophysical Research E: Planets↗
USGS2006

Radiative transfer modeling of dust-coated Pancam calibration target materials: Laboratory visible/near-infrared spectrogoniometry

Laboratory visible/near-infrared multispectral observations of Mars Exploration Rover Pancam calibration target materials coated with different thicknesses of Mars spectral analog dust were acquired under variable illumination geometries using the Bloomsburg University Goniometer. The data were fit with a two-layer radiative transfer model that combines a Hapke formulation for the dust with measured values of the substrate interpolated using a He-Torrance approach. We first determined the single-scattering albedo, phase function, opposition effect width, and amplitude for the dust using the entire data set (six coating thicknesses, three substrates, four wavelengths, and phase angles 3??-117??). The dust exhibited single-scattering albedo values similar to other Mars analog soils and to Mars Pathfinder dust and a dominantly forward scattering behavior whose scattering lobe became narrower at longer wavelengths. Opacity values for each dust thickness corresponded well to those predicted from the particles sizes of the Mars analog dust. We then restricted the number of substrates, dust thicknesses, and incidence angles input to the model. The results suggest that the dust properties are best characterized when using substrates whose reflectances are brighter and darker than those of the deposited dust and data that span a wide range of dust thicknesses. The model also determined the dust photometric properties relatively well despite limitations placed on the range of incidence angles. The model presented here will help determine the photometric properties of dust deposited on the MER rovers and to track the multiple episodes of dust deposition and erosion that have occurred at both landing sites. Copyright 2006 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗
USGS2021

Gulf of Mexico blue hole harbors high levels of novel microbial lineages

Exploration of oxygen-depleted marine environments has consistently revealed novel microbial taxa and metabolic capabilities that expand our understanding of microbial evolution and ecology. Marine blue holes are shallow karst formations characterized by low oxygen and high organic matter content. They are logistically challenging to sample, and thus our understanding of their biogeochemistry and microbial ecology is limited. We present a metagenomic and geochemical characterization of Amberjack Hole on the Florida continental shelf (Gulf of Mexico). Dissolved oxygen became depleted at the hole’s rim (32 m water depth), remained low but detectable in an intermediate hypoxic zone (40–75 m), and then increased to a secondary peak before falling below detection in the bottom layer (80–110 m), concomitant with increases in nutrients, dissolved iron, and a series of sequentially more reduced sulfur species. Microbial communities in the bottom layer contained heretofore undocumented levels of the recently discovered phylum Woesearchaeota (up to 58% of the community), along with lineages in the bacterial Candidate Phyla Radiation (CPR). Thirty-one high-quality metagenome-assembled genomes (MAGs) showed extensive biochemical capabilities for sulfur and nitrogen cycling, as well as for resisting and respiring arsenic. One uncharacterized gene associated with a CPR lineage differentiated hypoxic from anoxic zone communities. Overall, microbial communities and geochemical profiles were stable across two sampling dates in the spring and fall of 2019. The blue hole habitat is a natural marine laboratory that provides opportunities for sampling taxa with under-characterized but potentially important roles in redox-stratified microbial processes.

Interational Society of Microbial Ecology (ISME) J↗
USGS1991

Exploration drilling and reservoir model of the Platanares geothermal system, Honduras, Central America

Results of drilling, logging, and testing of three exploration core holes, combined with results of geologic and hydrogeochemical investigations, have been used to present a reservoir model of the Platanares geothermal system, Honduras. Geothermal fluids circulate at depths ??? 1.5 km in a region of active tectonism devoid of Quaternary volcanism. Large, artesian water entries of 160 to 165??C geothermal fluid in two core holes at 625 to 644 m and 460 to 635 m depth have maximum flow rates of roughly 355 and 560 l/min, respectively, which are equivalent to power outputs of about 3.1 and 5.1 MW(thermal). Dilute, alkali-chloride reservoir fluids (TDS ??? 1200 mg/kg) are produced from fractured Miocene andesite and Cretaceous to Eocene redbeds that are hydrothermally altered. Fracture permeabillity in producing horizons is locally greater than 1500 and bulk porosity is ??? 6%. A simple, fracture-dominated, volume-impedance model assuming turbulent flow indicates that the calculated reservoir storage capacity of each flowing hole is approximately 9.7 ?? 106 l/(kg cm-2), Tritium data indicate a mean residence time of 450 yr for water in the reservoir. Multiplying the natural fluid discharge rate by the mean residence time gives an estimated water volume of the Platanares system of ??? 0.78 km3. Downward continuation of a 139??C/km "conductive" gradient at a depth of 400 m in a third core hole implies that the depth to a 225??C source reservoir (predicted from chemical geothermometers) is at least 1.5 km. Uranium-thorium disequilibrium ages on calcite veins at the surface and in the core holes indicate that the present Platanares hydrothermal system has been active for the last 0.25 m.y. ?? 1991.

Journal of Volcanology and Geothermal Research↗
USGS2023

The smaller, the better? First evaluation of growth and mortality in crayfish internally tagged with p-Chips

Small-bodied aquatic animals present a challenge to researchers seeking to uniquely mark individuals for scientific study. Microtransponder tags, such as p-Chips, represent the smallest electronic animal tags available to meet this need. The use of p-Chips to tag freshwater crayfishes, however, has not been explored. The goal of this study, therefore, was to determine the effects of p-Chip tagging on growth and survival of crayfishes in a controlled laboratory environment. We also investigated potential influences from variables such as sex, reproductive form, number of molt events, and crayfish size on mortality. We internally tagged individuals of the woodland crayfish Faxonius hylas (Faxon, 1890) (12.2–26.6 mm carapace length; CL) with either one p-Chip (single-tag) or one p-Chip and one visual implant elastomer tag (double-tagged) and observed the effects over a period of 90 days. Survival probability over time was not statistically different ( P > 0.05) among tagging groups, sex, and reproductive form. Survival rates were similar across all tagging groups, with 75% in the control group, 77% in the double-tagged group, and 78% in the single-tag group. A strong correlation, however, was observed between survival and the number of molt events. Additionally, there was a negative correlation between survival and crayfish size (CL), indicating a higher risk of mortality for larger individuals. There were no statistically significant differences in growth in CL ( P = 0.30) or mass ( P = 0.19) among the tagging groups. We conclude that p-Chips are a viable tagging option for the study of crayfishes given their size, readability, and retention through molting cycles. We recommend that future studies repeat this experiment using smaller individuals to determine the minimum crayfish size compatible with p-Chip tagging. It is also important to test p-Chips with other crayfish species and compare the growth and mortality of crayfish tagged with p-Chips in natural habitats.

Journal of Crustacean Biology↗