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At least 739 records · Page 41Linked to original sources

Large-scale changes in bloater growth and condition in Lake Huron

Native Bloaters Coregonus hoyi have exhibited multiple strong year-classes since 2005 and now are the most abundant benthopelagic offshore prey fish in Lake Huron, following the crash of nonnative Alewives Alosa pseudoharengus and substantial declines in nonnative Rainbow Smelt Osmerus mordax . Despite recent recoveries in Bloater abundance, marketable-size (>229 mm) Bloaters remain scarce. We used annual survey data to assess temporal and spatial dynamics of Bloater body condition and lengths at age in the main basin of Lake Huron from 1973 to 2014. Basinwide lengths at age were modeled by cohort for the 1973–2003 year-classes using a von Bertalanffy growth model with time-varying Brody growth coefficient ( k ) and asymptotic length ( ) parameters. Median Bloater weights at selected lengths were estimated to assess changes in condition by modeling weight–length relations with an allometric growth model that allowed growth parameters to vary spatially and temporally. Estimated Bloater lengths at age declined 14–24% among ages 4–8 for all year-classes between 1973 and 2004. Estimates of declined from a peak of 394 mm (1973 year-class) to a minimum of 238 mm (1998 year-class). Observed mean lengths at age in 2014 were at all-time lows, suggesting that year-classes comprising the current Bloater population would have to follow growth trajectories unlike those characterizing the 1973–2003 year-classes to attain marketable size. Furthermore, estimated weights of 250-mm Bloaters (i.e., a large, commercially valuable size-class) declined 17% among all regions from 1976 to 2007. Decreases in body condition of large Bloaters are associated with lower lipid content and may be linked to marked declines in abundance of the amphipods Diporeia spp. in Lake Huron. We hypothesize that since at least 1976, large Bloaters have become more negatively buoyant and may have incurred an increasingly greater metabolic cost performing diel vertical migrations to prey upon the opossum shrimp Mysis diluviana and zooplankton.

Lake Huron↗

Informing our successors: What botanical information for Santa Cruz Island will researchers and conservation managers in the century ahead need the most?

Climate changes are predicted to drive changes in plant species composition and vegetation cover around the world. Preserved specimens and other botanical information that we gather today—a period future practitioners may look back on as an early stage of modern anthropogenic climate change—will be of value to conservation managers and conservation biologists in the decades and centuries ahead. Here, we present suggestions for the systematic collection, long-term curation (in museums, herbaria, and other research institutions), and maintenance of plant specimens, along with associated data and analyses on the plants and vegetation present today and in the past. The primary aim of this systematic survey is to provide information of high value to conservation researchers and managers both in the near term (the next several years) and through the century to come. Such a systematic survey would build on a strong foundation of research and adaptive management on the island. It would fill gaps in less well-studied groups of organisms and identify environmental, ecological, and cultural factors related to current patterns of distribution. It would also archive previously collected data, photographs, and other materials which would otherwise gradually degrade and become inaccessible. As a case study, we use Santa Cruz Island, California, which is managed for conservation. We are confident that the same approach may be applied to other lands and waters around the world. We argue that there is a particular need to collect and archive herbarium specimens and seeds from today's populations, activities largely overlooked in recent decades. We encourage conservation researchers and managers to consider what information will be most important for future managers and to help launch studies, monitoring programs, and collections to prepare their successors for success.

Western North American Naturalist↗

Water velocity, turbulence, and migration rate of subyearling fall Chinook salmon in the free-flowing and impounded Snake River

We studied the migratory behavior of subyearling fall Chinook salmon Oncorhynchus tshawytscha in free-flowing and impounded reaches of the Snake River to evaluate the hypothesis that velocity and turbulence are the primary causal mechanisms of downstream migration. The hypothesis states that impoundment reduces velocity and turbulence and alters the migratory behavior of juvenile Chinook salmon as a result of their reduced perception of these cues. At a constant flow (m3 /s), both velocity (km/d) and turbulence (the SD of velocity) decreased from riverine to impounded habitat as cross-sectional areas increased. We found evidence for the hypothesis that subyearling Chinook salmon perceive velocity and turbulence cues and respond to these cues by varying their behavior. The percentage of the subyearlings that moved faster than the average current speed decreased as fish made the transition from riverine reaches with high velocities and turbulence to upper reservoir reaches with low velocities and turbulence but increased to riverine levels again as the fish moved further down in the reservoir, where velocity and turbulence remained low. The migration rate (km/d) decreased in accordance with longitudinal reductions in velocity and turbulence, as predicted by the hypothesis. The variation in migration rate was better explained by a repeatedmeasures regression model containing velocity (Akaike’s information criterion ¼ 1,769.0) than a model containing flow (2,232.6). We conclude that subyearling fall Chinook salmon respond to changes in water velocity and turbulence, which work together to affect the migration rate.

Transactions of the American Fisheries Society↗

Numerical modeling of an estuary: A comprehensive skill assessment

Numerical simulations of the Hudson River estuary using a terrain-following, three-dimensional model (Regional Ocean Modeling System (ROMS)) are compared with an extensive set of time series and spatially resolved measurements over a 43 day period with large variations in tidal forcing and river discharge. The model is particularly effective at reproducing the observed temporal variations in both the salinity and current structure, including tidal, spring neap, and river discharge-induced variability. Large observed variations in stratification between neap and spring tides are captured qualitatively and quantitatively by the model. The observed structure and variations of the longitudinal salinity gradient are also well reproduced. The most notable discrepancy between the model and the data is in the vertical salinity structure. While the surface-to-bottom salinity difference is well reproduced, the stratification in the model tends to extend all the way to the water surface, whereas the observations indicate a distinct pycnocline and a surface mixed layer. Because the southern boundary coindition is located near the mouth the estuary, the salinity within the domain is particularly sensitive to the specification of salinity at the boundary. A boundary condition for the horizontal salinity gradient, based on the local value of salinity, is developed to incorporate physical processes beyond the open boundary not resolved by the model. Model results are sensitive to the specification of the bottom roughness length and vertical stability functions, insofar as they influence the intensity of vertical mixing. The results only varied slightly between different turbulence closure methods of k-??, k-??, and k-kl. Copyright 2005 by the American Geophysical Union.

New York↗

Flood-inundation maps for the lower Pawcatuck River in Westerly, Rhode Island, and Stonington and North Stonington, Connecticut

A series of 11 digital flood-inundation maps was developed for a 5.5-mile reach of the lower Pawcatuck River in Westerly, Rhode Island, and Stonington and North Stonington, Connecticut, by the U.S. Geological Survey (USGS) in cooperation with the Town of Westerly, Rhode Island, and the Rhode Island Office of Housing and Community Development. The coverage of the maps extends from downstream from the Ashaway River inflow at the State Border between Hopkinton and Westerly, Rhode Island, and North Stonington, Connecticut, to about 500 feet (ft) downstream from the U.S. Route 1/Broad Street bridge on the State border between Westerly, Rhode Island, and Stonington, Connecticut. A one-dimensional step-backwater hydraulic model created and calibrated for an ongoing (2018) Federal Emergency Management Agency Flood-Insurance Study for New London County, Connecticut and Washington County, Rhode Island was updated for this study. The hydraulic model reflects the removal of the White Rock dam during 2015–16, and was calibrated using the stage-discharge relation at the USGS Pawcatuck River at Westerly, Rhode Island, streamgage (01118500) and documented high-water marks from the March 30, 2010, flood, which had a peak flow slightly greater than the estimated 0.2-percent annual exceedance probability floodflow. The hydraulic model was used to compute water-surface profiles for 11 flood stages at 1-ft intervals referenced to the USGS Pawcatuck River at Westerly, Rhode Island, streamgage (01118500) and ranging from 6.0 ft (3.32 ft, North American Vertical Datum of 1988), which is the National Weather Service Advanced Hydrologic Prediction Service flood category “action stage,” to 16.0 ft (13.32 ft, North American Vertical Datum of 1988), which is the maximum stage of the stage-discharge relation at the streamgage and exceeds the National Weather Service Advanced Hydrologic Prediction Service flood category “major flood stage” of 11.0 ft. The simulated water-surface profiles were combined with a geographic information system digital elevation model derived from light detection and ranging (lidar) data with a 1.0-ft vertical accuracy to create flood-inundation maps. The flood-inundation maps depict estimates of the areal extent and depth of flooding corresponding to 11 selected flood stages at the streamgage. The flood-inundation maps depict only riverine flooding and do not depict any tidal backwater or coastal storm surge that could occur in the lower part of the river reach. The flood-inundation maps can be accessed through the USGS Flood Inundation Mapping Science website at https://water.usgs.gov/osw/flood_inundation . Near-real-time stages and discharges at the Pawcatuck River streamgage can be obtained from the USGS National Water Information System at https://waterdata.usgs.gov/ . The National Weather Service Advanced Hydrologic Prediction Service provides flood forecast of stage for this site (WSTR1) at https://water.weather.gov/ahps/ . The availability of flood-inundation maps referenced to current and forecasted water levels at the USGS Pawcatuck River at Westerly, Rhode Island streamgage (01118500) can provide emergency management personnel and residents with information that is critical for flood response activities such as evacuations and road closures, and postflood recovery efforts. The flood-inundation maps are nonregulatory but provide Federal, State, and local agencies and the public with estimates of the potential extent of flooding during flood events.

Connecticut, Rhode Island↗

Effects of human activity of breeding American Oystercatchers, Cumberland Island National Seashore, Georgia, USA

Abstract.-Increased human use of coastal areas threatens the United States population of American Oystercatchers (Haematopus palliatus), a species of special concern. Biologists often attribute its low numbers and reproductive success to human disturbance, but the mechanism by which human presence reduces reproductive success is not well understood. During the 2003 and 2004 breeding seasons, 32 nesting attempts of American Oystercatchers were studied on Cumberland Island National Seashore (CINS). Behavior was examined with and without human activity in the area to determine how human activity affected behavior. The oystercatchers' behavioral responses (proportion time) were analyzed with and without human or intraspecific disturbances using mixed models regression analysis. Proportions of time human activities were present (< 300 m from oystercatchers) during observations averaged 0.14 (N = 32, 95% CI = 0.08-0.20). During incubation, pedestrian activity near (< 137 m) oystercatchers reduced the frequency of occurrence of reproductive behavior, but pedestrian activity far (138-300 m) from oystercatchers had no effect. Vehicular and boat activities (< 300 m) had minimal effects on behavior during incubation. During brood rearing, an effect of pedestrian activity near oystercatchers was not evident; however, pedestrian activity far from oystercatchers increased the frequency of reproductive behavior. Vehicular and boat activity had no effects on behavior during brood rearing. Of 32 nesting attempts, two failed (<10%) because of human disturbance and were located in areas of greater human activity (south end). Managers on CINS should minimize pedestrian activity near nests (< 137 m) during incubation. During brood rearing, protection from pedestrian activity should be increased, when possible, to >137 m and vehicular activity should be minimized at current levels or less.

Waterbirds↗

Bathymetry and capacity of Chambers Lake, Chester County, Pennsylvania

Introduction Chambers Lake is a manmade reservoir on Birch Run, a tributary to West Branch Brandywine Creek in Chester County, Pennsylvania. The lake was created in 1994 after the completion of Multi-Purpose Dam PA-436F (Hibernia Dam), which was built under the Watershed Protection & Flood Control Prevention Act (U.S. Soil Conservation Service, 1991). Hibernia dam is 1,700 feet upstream from the confluence of Birch Run with West Branch Brandywine Creek. The primary objectives for Hibernia Dam were to provide (1) flood control, (2) a supplemental source of water supply for the greater City of Coatesville public water system, and (3) recreational opportunities. The drainage basin of Chambers Lake encompasses approximately 4.5 square miles, and the lake covers a surface area of about 95 acres at normal pool, which is at an elevation of 579.2 feet above the North American Vertical Datum of 1988 (NAVD 88) [580.0 feet above the National Geodetic Vertical Datum of 1929 (NGVD 29)]. The crest of the auxiliary spillway of the dam is 586.6 feet above NAVD 88. The elevation of the auxiliary spillway is important to this investigation because this elevation defines the flood storage capacity of Chambers Lake. Water levels exceeding this elevation are routed through the auxiliary spillway and flow through adjoining woodland to Birch Run. The U.S. Geological Survey (USGS), in cooperation with Chester County Water Resources Authority (CCWRA) and the County of Chester, surveyed the bathymetry and selected above-water features of Chambers Lake in September 2014. The purpose of the survey was to develop an accurate representation of the surface of the bottom of Chambers Lake and to determine the stage area and reservoir-storage capacity relation as of September 2014. CCWRA is responsible for operation of the dam and water-supply reservoir. Since construction, CCWRA has used a stage&ndash;storage capacity relation developed from the original survey conducted in the 1990s to estimate the volume of water available for water supply and the available flood storage. The bathymetric mapping effort was initiated due to interest in potential changes in current (2014) storage capacity when compared to the stage&ndash;storage capacity relation developed during design. The generated bathymetric surface may serve as a baseline to which temporal changes in storage capacity, owing to sedimentation and other factors, can be compared. In addition, these data will improve the overall accuracy of the stage&ndash;storage capacity table that CCWRA uses for reservoir and flood management operations. This report describes the methods used to create a bathymetric map of Chambers Lake for the computation of reservoir storage capacity as of September 2014. The product is a bathymetric map and a table showing the storage capacity of the reservoir at 2-foot increments from minimum usable elevation up to full capacity at the crest of the auxiliary spillway.

Pennsylvania↗

Freshwater mussel population status and habitat quality in the Clinch River, Virginia and Tennessee, USA: a featured collection

The Clinch River of southwestern Virginia and northeastern Tennessee is arguably the most important river for freshwater mussel conservation in the United States. This featured collection presents investigations of mussel population status and habitat quality in the Clinch River. Analyses of historic water- and sediment-quality data suggest that water column ammonia and water column and sediment metals, including Cu and Zn, may have contributed historically to declining densities and extirpations of mussels in the river's Virginia sections. These studies also reveal increasing temporal trends for dissolved solids concentrations throughout much of the river's extent. Current mussel abundance patterns do not correspond spatially with physical habitat quality, but they do correspond with specific conductance, dissolved major ions, and water column metals, suggesting these and/or associated constituents as factors contributing to mussel declines. Mussels are sensitive to metals. Native mussels and hatchery-raised mussels held in cages in situ accumulated metals in their body tissues in river sections where mussels are declining. Organic compound and bed-sediment contaminant analyses did not reveal spatial correspondences with mussel status metrics, although potentially toxic levels were found. Collectively, these studies identify major ions and metals as water- and sediment-quality concerns for mussel conservation in the Clinch River.

Tennessee, Virginia↗

New approaches for sampling and modeling native and exotic plant species richness

We demonstrate new multi-phase, multi-scale approaches for sampling and modeling native and exotic plant species to predict the spread of invasive species and aid in control efforts. Our test site is a 54,000-ha portion of Rocky Mountain National Park, Colorado, USA. This work is based on previous research wherein we developed vegetation sampling techniques to identify hot spots of diversity, important rare habitats, and locations of invasive plant species. Here we demonstrate statistical modeling tools to rapidly assess current patterns of native and exotic plant species to determine which habitats are most vulnerable to invasion by exotic species. We use stepwise multiple regression and modified residual kriging to estimate numbers of native species and exotic species, as well as probability of observing an exotic species in 30 × 30-m cells. Final models accounted for 62% of the variability observed in number of native species, 51% of the variability observed in number of exotic species, and 47% of the variability associated with observing an exotic species. Important independent variables used in developing the models include geographical location, elevation, slope, aspect, and Landsat TM bands 1-7. These models can direct resource managers to areas in need of further inventory, monitoring, and exotic species control efforts.

Western North American Naturalist↗

Migratory behavior and physiological development as potential determinants of life history diversity in fall Chinook Salmon in the Clearwater River

We studied the influence of behavior, water velocity, and physiological development on the downstream movement of subyearling fall‐run Chinook Salmon Oncorhynchus tshawytscha in both free‐flowing and impounded reaches of the Clearwater and Snake rivers as potential mechanisms that might explain life history diversity in this stock. Movement rates and the percentage of radio‐tagged fish that moved faster than the average current velocity were higher in the free‐flowing Clearwater River than in impounded reaches. This supports the notion that water velocity is a primary determinant of downstream movement regardless of a fish's physiological development. In contrast, movement rates slowed and detections became fewer in impounded reaches, where water velocities were much lower. The percentage of fish that moved faster than the average current velocity continued to decline and reached zero in the lowermost reach of Lower Granite Reservoir, suggesting that the behavioral disposition to move downstream was low. These findings contrast with those of a similar, previous study of Snake River subyearlings despite similarity in hydrodynamic conditions between the two studies. Physiological differences between Snake and Clearwater River migrants shed light on this disparity. Subyearlings from the Clearwater River were parr‐like in their development and never showed the increase in gill Na + /K + ‐ATPase activity displayed by smolts from the Snake River. Results from this study provide evidence that behavioral and life history differences between Snake and Clearwater River subyearlings may have a physiological basis that is modified by environmental conditions.

Idaho, Washington↗

Forecasting the probability of future groundwater levels declining below specified low thresholds in the conterminous U.S.

We present a logistic regression approach for forecasting the probability of future groundwater levels declining or maintaining below specific groundwater-level thresholds. We tested our approach on 102 groundwater wells in different climatic regions and aquifers of the United States that are part of the U.S. Geological Survey Groundwater Climate Response Network. We evaluated the importance of current groundwater levels, precipitation, streamflow, seasonal variability, Palmer Drought Severity Index, and atmosphere/ocean indices for developing the logistic regression equations. Several diagnostics of model fit were used to evaluate the regression equations, including testing of autocorrelation of residuals, goodness-of-fit metrics, and bootstrap validation testing. The probabilistic predictions were most successful at wells with high persistence (low month-to-month variability) in their groundwater records and at wells where the groundwater level remained below the defined low threshold for sustained periods (generally three months or longer). The model fit was weakest at wells with strong seasonal variability in levels and with shorter duration low-threshold events. We identified challenges in deriving probabilistic-forecasting models and possible approaches for addressing those challenges.

Journal of the American Water Resources Associatio↗

Extremes of heat, drought and precipitation depress reproductive performance in shortgrass prairie passerines

Climate change elevates conservation concerns worldwide because it is likely to exacerbate many identified threats to animal populations. In recent decades, grassland birds have declined faster than other North American bird species, a loss thought to be due to habitat loss and fragmentation and changing agricultural practices. Climate change poses additional threats of unknown magnitude to these already declining populations. We examined how seasonal and daily weather conditions over 10 years influenced nest survival of five species of insectivorous passerines native to the shortgrass prairie and evaluate our findings relative to future climate predictions for this region. Daily nest survival ( n = 870) was best predicted by a combination of daily and seasonal weather variables, age of nest, time in season and bird habitat guild. Within a season, survival rates were lower on very hot days (temperatures &ge; 35 &deg;C), on dry days (with a lag of 1 day) and on stormy days (especially for those species nesting in shorter vegetation). Across years, survival rates were also lower during warmer and drier breeding seasons. Clutch sizes were larger when early spring temperatures were cool and the week prior to egg-laying was wetter and warming. Climate change is likely to exacerbate grassland bird population declines because projected climate conditions include rising temperatures, more prolonged drought and more intense storms as the hydrological cycle is altered. Under varying realistic scenarios, nest success estimates were halved compared to their current average value when models both increased the temperature (3 &deg;C) and decreased precipitation (two additional dry days during a nesting period), thus underscoring a sense of urgency in identifying and addressing the current causes of range-wide declines.

Ibis↗

Eukaryotic viruses in wastewater samples from the United States

Human fecal matter contains a large number of viruses, and current bacterial indicators used for monitoring water quality do not correlate with the presence of pathogenic viruses. Adenoviruses and enteroviruses have often been used to identify fecal pollution in the environment; however, other viruses shed in fecal matter may more accurately detect fecal pollution. The purpose of this study was to develop a baseline understanding of the types of viruses found in raw sewage. PCR was used to detect adenoviruses, enteroviruses, hepatitis B viruses, herpesviruses, morbilliviruses, noroviruses, papillomaviruses, picobirnaviruses, reoviruses, and rotaviruses in raw sewage collected throughout the United States. Adenoviruses and picobirnaviruses were detected in 100% of raw sewage samples and 25% and 33% of final effluent samples, respectively. Enteroviruses and noroviruses were detected in 75% and 58% of raw sewage samples, respectively, and both viral groups were found in 8% of final effluent samples. This study showed that adenoviruses, enteroviruses, noroviruses, and picobirnaviruses are widespread in raw sewage. Since adenoviruses and picobirnaviruses were detected in 100% of raw sewage samples, they are potential markers of fecal contamination. Additionally, this research uncovered previously unknown sequence diversity in human picobirnaviruses. This baseline understanding of viruses in raw sewage will enable educated decisions to be made regarding the use of different viruses in water quality assessments. Copyright ?? 2009, American Society for Microbiology. All Rights Reserved.

Applied and Environmental Microbiology↗

Effects of lipid extraction on stable isotope ratios in avian egg yolk: Is arithmetic correction a reliable alternative?

Many studies of nutrient allocation to egg production in birds use stable isotope ratios of egg yolk to identify the origin of nutrients. Dry egg yolk contains >50% lipids, which are known to be depleted in 13 C. Currently, researchers remove lipids from egg yolk using a chemical lipid-extraction procedure before analyzing the isotopic composition of protein in egg yolk. We examined the effects of chemical lipid extraction on ?? 13 C, ?? 15 N, and ?? 34 S of avian egg yolk and explored the utility of an arithmetic lipid correction model to adjust whole yolk ?? 13 C for lipid content. We analyzed the dried yolk of 15 captive Spectacled Eider (Somateriafischeri) and 20 wild King Eider (S. spectabilis) eggs, both as whole yolk and after lipid extraction with a 2:1 chloroform:methanol solution. We found that chemical lipid extraction leads to an increase of (mean ?? SD) 3.3 ?? 1.1% in ?? 13 C, 1.1 ?? 0.5% in ?? 15 N, and 2.3 ?? 1.1% in ?? 34 S. Arithmetic lipid correction provided accurate values for lipid-extracted S13C in captive Spectacled Eiders fed on a homogeneous high-quality diet. However, arithmetic lipid correction was unreliable for wild King Eiders, likely because of their differential incorporation of macronutrients from isotopically distinct environments during migration. For that reason, we caution against applying arithmetic lipid correction to the whole yolk ?? 13 C of migratory birds, because these methods assume that all egg macronutrients are derived from the same dietary sources. ?? 2010 The American Ornithologists' Union.

The Auk↗

Evaluating the sustainability of a cisco fishery in Thunder Bay, Ontario, under alternative harvest policies

Sustainable management of fish stocks is promoted through the application of management strategy evaluations (MSEs), providing information to managers on the relative performance of alternative management approaches (strategies) while accounting for uncertainty. In this study, we developed a simplified MSE of a stock of Cisco Coregonus artedi in Thunder Bay, Ontario, to determine both the sustainability of the current harvest control rule (i.e., a constant exploitation rate [ U ] of 10%) and the performance of alternative harvest control rules in meeting fishery objectives. Success in meeting fishery objectives was evaluated through attained yields, interannual variation in yields, magnitude of spawning stock biomass (SB), and the risk of reaching low SB—performance metrics established based on consultation with an advisory group to Lake Superior fishery managers. Our simulations explicitly accounted for uncertainty in the frequency of strong year‐classes being produced by Cisco, the stock–recruit relationship, stock abundance, and the sex‐specific nature of roe harvest. Assuming that future productivity is similar to the productivity observed over the period from 1985 to 2015, results suggest that the current U of 10% is sustainable in terms of maintaining SB above 20% of the unfished level. Variants of constant U control rules that included thresholds defining when U is to decrease as a function of SB increased yield, decreased risk, and increased the magnitude of SB at the end of the simulation period. However, these advantages came at the expense of greater interannual variation in yield. Constant catch control rules greatly underperformed constant U control rules in terms of magnitude in yield; however, they did reduce interannual variation in yield compared to constant U control rules. Furthermore, conditional versions of constant catch control rules (i.e., threshold stock sizes below which the catch limit was reduced) mitigated risks of staying at low stock size.

Thunder Bay↗

Advanced quantitative precipitation information: Improving monitoring and forecasts of precipitation, streamflow, and coastal flooding in the San Francisco Bay area

Advanced Quantitative Precipitation Information (AQPI) is a synergistic project that combines observations and models to improve monitoring and forecasts of precipitation, streamflow, and coastal flooding in the San Francisco Bay Area. As an experimental system, AQPI leverages more than a decade of research, innovation, and implementation of a statewide, state-of-the-art network of observations, and development of the next generation of weather and coastal forecast models. AQPI was developed as a prototype in response to requests from the water management community for improved information on precipitation, riverine, and coastal conditions to inform their decision-making processes. Observation of precipitation in the complex Bay Area landscape of California’s coastal mountain ranges is known to be a challenging problem. But, with new advanced radar network techniques, AQPI is helping fill an important observational gap for this highly populated and vulnerable metropolitan area. The prototype AQPI system consists of improved weather radar data for precipitation estimation; additional surface measurements of precipitation, streamflow, and soil moisture; and a suite of integrated forecast modeling systems to improve situational awareness about current and future water conditions from sky to sea. Together these tools will help improve emergency preparedness and public response to prevent loss of life and destruction of property during extreme storms accompanied by heavy precipitation and high coastal water levels—especially high-moisture laden atmospheric rivers. The Bay Area AQPI system could potentially be replicated in other urban regions in California, the United States, and worldwide.

California↗

California State Waters Map Series — Offshore of Salt Point, California

In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California&rsquo;s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of Salt Point map area is located in northern California, about 110 km north of San Francisco and 50 km south of Point Arena. The map area includes three California Marine Protected Areas: the southern portion of the Stewarts Point State Marine Reserve, the Salt Point State Marine Conservation Area, and the Gerstle Cove State Marine Reserve. The coast and shoreline are rugged and scenic, characterized by rocky promontories, steep bluffs capped by bare to forested marine terraces, kelp-rich coves, and nearshore rocks and pinnacles. The largely undeveloped onshore part of the map area is used primarily for grazing and recreation. U.S. Highway 1 extends along the coast through the map area, passing through Salt Point State Park, Kruse Rhododendron State Natural Reserve, and Stillwater Cove Regional Park. Sandy beaches are uncommon, present only in relatively protected coves. The seafloor in the map area extends from the shoreline to water depths of about 90 to 100 m. The nearshore to inner shelf area (to water depths of about 50 to 60 m) typically dips seaward about 1.0&deg; to 1.5&deg; and is underlain by bedrock and sand-sized to coarser grained sediment. The midshelf, underlain predominantly by muddy sediments, slopes more gently (less than 0.5&deg;). Surficial and shallow sediments were deposited in the last about 21,000 years during the approximately 125-m sea-level rise that followed the last major lowstand associated with the Last Glacial Maximum, at which time the entire Offshore of Salt Point map area was emergent and the shoreline was about 20 km west of the present-day shoreline. Tectonic influences that impact the shelf morphology and geology in the map area are related to local faulting, folding, uplift, and subsidence. The onshore part of the map area is cut by the northwest-striking San Andreas Fault&mdash;the right-lateral transform boundary between the North American and Pacific tectonic plates with an estimated slip rate of about 17 to 25 mm/yr in this area. The region between Fort Ross and Point Arena, west of the San Andreas Fault, is the known as the &ldquo;Gualala Block&rdquo; on the basis of its distinctive geology. The Gualala Block consists of a thick, discontinuous Upper Cretaceous to Miocene stratigraphic section, however, only the submarine fan deposits of the Paleocene and Eocene German Rancho Formation are exposed along the coast in the Offshore of Salt Point map area. The German Rancho Formation also forms all of the rugged seafloor bedrock outcrops in the map area. The western boundary of the Gualala Block lies 3 to 5 km offshore, perhaps at the shore-parallel Gualala Fault. High-resolution seismic-reflection data reveal shallow folding and faulting in inferred upper Pleistocene strata along the Gualala Fault trend, suggesting this structure is now or has been recently active. The last ground rupture in the map area occurred during the devastating great 1906 California earthquake (M7.8, 4/18/1906), thought to have nucleated on the San Andreas Fault about 100 kilometers to the south offshore of San Francisco. Circulation over the continental shelf in the map area is dominated by the southward-flowing California Current, the eastern limb of the North Pacific Gyre. Associated upwelling brings cool, nutrient-rich waters to the surface, resulting in high biological productivity. The current flow generally is southeastward during the spring and summer; however, during the fall and winter, the otherwise persistent northwest winds are sometimes weak or absent, causing the California Current to move farther offshore and the Davidson Current, a weaker, northward-flowing countercurrent, to become active. Throughout the year, this part of the central California coast is exposed to four wave climate regimes: the north Pacific swell, the southern swell, northwest wind waves, and local wind waves. The north Pacific swell dominates in winter months, with wave heights at offshore buoys ranging from 2 to 10 m and wave periods ranging from 10 to 25 s. During summer months, the largest waves come from the southern swell, generated by storms in the south Pacific and offshore Central America. Characteristically, these swells have smaller wave heights (0.3 to 3 m) and similarly long periods (range 10 to 25 s). Northwest wind waves affect the coast throughout the year, while local wind waves are most common from October to April. These two wind-wave regimes typically have wave heights of 1 to 4 m and short periods (3 to 10 s). Potential marine benthic habitats in the Offshore of Salt Point map area include unconsolidated continental shelf sediments, mixed continental shelf substrate, and hard continental shelf substrate. Rocky-shelf outcrops and rubble are considered to be promising potential habitats for rockfish and lingcod, both of which are recreationally and commercially important species.

California↗

Management of the brown-headed cowbird: Implications for endangered species and agricultural damage mitigation

The brown-headed cowbird ( Molothrus ater ; cowbird) is unique among North American blackbirds (Icteridae) because it is managed to mitigate the negative effects on endangered songbirds and economic losses in agricultural crops. Cowbird brood parasitism can further affect species that are considered threatened or endangered due to anthropogenic land uses. Historically, cowbirds have often been culled without addressing ultimate causes of songbird population declines. Similar to other North American blackbirds, cowbirds depredate agricultural crops, albeit at a lower rate reported for other blackbird species. Conflicting information exists on the extent of agricultural damage caused by cowbirds and the effectiveness of mitigation measures for application to management. In this paper, we reviewed the progress that has been made in cowbird management from approximately 2005 to 2020 in relation to endangered species. We also reviewed losses to the rice ( Oryza sativa ) crop attributed to cowbirds and the programs designed to reduce depredation. Of the 4 songbird species in which cowbirds have been managed, both the Kirtland’s warbler ( Dendroica kirtlandii ) and black-capped vireo ( Vireo atricapilla ) have been removed from the endangered species list following population increases in response to habitat expansion. Cowbird trapping has ceased for Kirtland’s warbler but continues for the vireo. In contrast, least Bell’s vireo ( V. bellii pusillus ) and southwestern willow flycatcher ( Empidonax traillii extimus ) still require cowbird control after modest increases in suitable habitat. Our review of rice depredation by cowbirds revealed models that have been created to determine the number of cowbirds that can be taken to decrease rice loss have been useful but require refinement with new data that incorporate cowbird population changes in the rice growing region, dietary preference studies, and current information on population sex ratios and female cowbird egg laying. Once this information has been gathered, bioenergetic and economic models would increase our understanding of the damage caused by cowbirds.

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