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At least 721 records · Page 40Linked to original sources

USGS2024

Handling effects on dispersal of PIT-tagged Flannelmouth Sucker

Objective Handling and tagging migrating fish might alter their behavior, limiting inference from mark–recapture studies. Posthandling flight of tributary spawning Flannelmouth Sucker Catostomus latipinnis was previously identified in Coal Creek in the upper Colorado River basin. Our objective was to determine if similar issues were present at McElmo Creek in the San Juan River basin. Methods We compared emigration timing of Flannelmouth Sucker that had been handled and tagged with passive integrated transponder tags during their tributary spawning run to individuals tagged in previous years and detected both entering and exiting the tributary. Linear mixed-effects models were used to examine intrinsic and extrinsic factors contributing to exit timing. Result Sex and tagging year were associated with emigration timing, but handling did not result in posthandling flight from McElmo Creek. Females exited the tributary ~3 days before males, and larger fish emigrated earlier than smaller adults. Conclusion Differences in capture technique and timing, available spawning habitat, and fish motivation across river systems may contribute to differences in posthandling emigration of tributary spawning Flannelmouth Sucker.

Colorado, Utah↗

USGS2019

Assessment of operational and structural factors influencing performance of fish collectors in forebays of high-head dams

Providing efficient downstream passage is critical for improving populations of migratory fishes in impounded river systems. High‐head dams, such as those used for water storage or flood‐risk management, pose unique passage challenges requiring unique solutions. Systems to collect fish in dam forebays (“forebay collectors”) for transport to downstream release locations have been used at some high‐head dams in the western United States since the 1950s. Collection efficiency of these facilities has ranged from nearly 0% to 100%, suggesting the need for a better understanding of factors affecting performance in these complex environments if they are to be designed and deployed at new sites. We compiled information on environmental, structural, and performance characteristics of seven existing forebay collectors to quantify factors affecting their performance based on a meta‐analysis using a data set containing 52 separate collection estimates. Covariates included species type (steelhead Oncorhynchus mykiss, Chinook Salmon O. tshawytscha, Coho Salmon O. kisutch, and Sockeye Salmon O. nerka), collector inflow, collector entrance area, relative size of the dam forebay, and whether or not nets were used to enhance collection. We found that inflow, the use of lead nets, the size of the collector entrance area, the relative size of the dam forebay, and the interaction between collector entrance and forebay areas were significant predictors of collection performance. There was also evidence for differences between species. Chinook Salmon exhibited the lowest collection rates among the projects we examined, while steelhead collection rates were highest. These results provide guidance to design more efficient forebay collectors and improve the success of existing systems.

Oregon, Washington↗

USGS2020

Genetic family reconstruction characterizes Lake Sturgeon use of newly constructed spawning habitat and larval dispersal

Since 2004, seven spawning reefs have been constructed in the St. Clair–Detroit River system to remediate lost spawning habitat and increase recruitment of Lake Sturgeon Acipenser fulvescens . Assessment of management actions by collecting and enumerating eggs and larvae provided evidence of spawning Lake Sturgeon and survival of eggs until larval dispersal at constructed reef sites. However, the number of spawners contributing sampled offspring ( N s ), effective number of breeders ( N b ), and extent of larval dispersal was unknown. Genetic reconstruction of familial relationships assigned eggs and larvae ( n = 725) collected in 2015 and 2016 to full‐ and half‐sibling groups and estimated N s , N b , and genetic connectivity. We used a modified COLONY simulation module to simulate and convert 18 microsatellite loci (13 disomic and 5 polysomic) to 205 dominant present/absent markers to increase marker number and familial assignment accuracy in family reconstruction analysis. We assessed COLONY's ability to accurately infer familial relationships across small ( n = 50), moderate ( n = 125), and large ( n = 750) larval sample sizes using two assumed allele frequency distributions for polysomic loci. We found that with fewer offspring sampled, COLONY underestimated N s and with large sample sizes overestimated N s . However, estimates were usually within 12–16% of the simulated true N s . Across reefs, estimates of N s were 151 in 2015 and 208 in 2016, and N b was similar (158 in 2015 and 198 in 2016). Evidence of full‐ and half‐sibling larvae collected at multiple locations indicated that individual Lake Sturgeon spawned at multiple locations within years and larvae dispersed considerable distances. Estimating N s , N b , larval dispersal, and inferred genetic connectivity between locations provides managers with population demographic parameters to assess habitat remediation projects. Continued monitoring, including genetic family reconstruction, may provide insight into the long‐term effects of constructed spawning habitat on recruitment and population‐level genetic diversity.

St. Clair–Detroit River system, Lake Michigan, Lak↗

USGS2001

Growth rate responses of Missouri and lower Yellowstone river fishes to a latitudinal gradient

Growth rate coefficients estimated for channel catfish Ictalurus punctatus, emerald shiners Notropis atherinoides, freshwater drums Aplodinotus grunniens, river carpsuckers Carpiodes carpio and saugers Stizostedion canadense collected in 1996-1998 from nine river sections of the Missouri and lower Yellowstone rivers at two life-stages (young-of-the-year and age 1 + years) were significantly different among sections. However, they showed no river-wide latitudinal trend except for age 1 + years emerald shiners that did show a weak negative relation between growth and both latitude and length of growing season. The results suggest growth rates of fishes along the Missouri River system are complex and could be of significance in the management and conservation of fish communities in this altered system. ?? 2001 The Fisheries Society of the British Isles.

Journal of Fish Biology↗

USGS2017

Influences of Relative Sea-Level Rise and Mississippi River Delta Plain Evolution on the Holocene Middle Amite River, Southeastern Louisiana

The Holocene geomorphic history of southeastern Louisiana's middle Amite River is recorded in the stratigraphy of three alloformations, identified in decreasing age as the Watson (WAT), Denham Springs (DS), and Magnolia Bridge (MAG). The WAT meander belt formed by at least 9000 yr B.P., when sea level was lower and the Amite River was tributary to a larger ancestral drainage basin. The DS became an active meander belt by at least 3000 yr B.P., in response to relative sea-level rise and eastward progradation of the Mississippi River delta plain. The MAG developed its meander belt, in part, during the European settlement of the drainage basin, and is now attempting to adjust to modern anthropogenic influences. Geomorphic influences on the middle Amite River floodplain have temporal and spatial components that induce regional- and local-scale effects. Regional extrinsic influences caused meander belt avulsion that produced alloformations. However, local influences produced intrinsic geomorphic thresholds that modified channel morphology within a meander belt but did not induce alloformation development. Base-level influences of the relative sea-level rise and the Mississippi River delta plain were so dominant that the effects of possible climate change were not recognized in the Holocene Amite River system.

Quaternary Research↗

USGS1993

Accumulation and effects of lead and cadmium on wood ducks near a mining and smelting complex in Idaho

A study of wood ducks ( Aix sponsa ) was conducted along the Coeur d'Alene River system in northern Idaho in 1986 and 1987. Most of this area has been subjected to severe contamination from lead and other metals from mining and smelting since the 1880s. In 1986, a preliminary study of wood duck nesting was conducted in the contaminated area; incubating hens captured in nest boxes were bled and weighed. Blood samples were used to determine lead and cadmium concentrations and physiological characteristics. In 1987, an intensive study of wood ducks involved trapping and monitoring nest boxes in the contaminated area. Blood and tissue samples were also taken from wood ducks from a reference area without known contamination from metals. Lead levels in blood and tissues of most wood ducks from the contaminated area frequently exceeded those considered hazardous to birds; maximum levels (wet weight) of lead were 8 μg g −1 in blood and 14 μg g −1 in liver. Changes in physiological characteristics constituted the only evidence of potentially adverse effects from lead. In the contaminated area, nesting success (55% unadjusted, 35% Mayfield estimate) was less than in other areas where predation was low and nest boxes were used; but lead concentrations and physiological characteristics of blood were similar in successful and unsuccessful hens. Values of ALAD, hemoglobin, and body mass were negatively correlated with blood concentrations of lead, whereas protoporphyrin was positively correlated with lead levels in the blood. Some of the protoporphyrin values (1,091 μg dl −1 in a male and 756 μg dl −1 in a female) equalled those associated with lead toxicosis in experimental birds. ALAD activity was low in most birds from the contaminated area; values of 0 were obtained from 11 birds. Lead levels in blood, ALAD, protoporphyrin, and hemoglobin were significantly different between birds from the contaminated and reference areas. Concentrations of lead in ingesta of wood ducks ranged from 0.9 to 610 μg g −1 in the contaminated area and 0.2 to 0.6 μg g −1 in the reference area. Levels of cadmium in kidneys of wood ducks ranged from 1μg g −1 to 20 μg g −1 in the contaminated area and from only to 0.1 μg g −1 to 1 μg g −1 in the reference area. Cadmium concentrations were less than known effect levels.

Idaho↗

USGS1979

Martian channels and the search for extraterrestrial life

The origin of the channels on Mars has been a subject of intense interest since they were first recognized on early Mariner 9 images (Driscoll, 1972; Masursky, 1973). Their presence on the planet, and their striking resemblance to terrestrial flood channels related to glacial outbursts or to dendritic river systems has suggested to most investigators (Baker, 1974, 1977; Nummedal, 1978; Carr, 1979; Masursky et al., 1977) that they were formed by running water. Because life as we know it is dependent on water, the discovery by the 'Mariner cameras', of watercut channels and volcanoes as a source for water, and water ice in the residual north polar cap by Viking, has reaffirmed the choice of Mars as the best target for the search for extraterrestrial life. ?? 1979 Springer-Verlag.

Journal of Molecular Evolution↗

USGS2012

Dealing with uncertainty when assessing fish passage through culvert road crossings

Assessing the passage of aquatic organisms through culvert road crossings has become increasingly common in efforts to restore stream habitat. Several federal and state agencies and local stakeholders have adopted assessment approaches based on literature-derived criteria for culvert impassability. However, criteria differ and are typically specific to larger-bodied fishes. In an analysis to prioritize culverts for remediation to benefit imperiled, small-bodied fishes in the Upper Coosa River system in the southeastern United States, we assessed the sensitivity of prioritization to the use of differing but plausible criteria for culvert impassability. Using measurements at 256 road crossings, we assessed culvert impassability using four alternative criteria sets represented in Bayesian belief networks. Two criteria sets scored culverts as either passable or impassable based on alternative thresholds of culvert characteristics (outlet elevation, baseflow water velocity). Two additional criteria sets incorporated uncertainty concerning ability of small-bodied fishes to pass through culverts and estimated a probability of culvert impassability. To prioritize culverts for remediation, we combined estimated culvert impassability with culvert position in the stream network relative to other barriers to compute prospective gain in connected stream habitat for the target fish species. Although four culverts ranked highly for remediation regardless of which criteria were used to assess impassability, other culverts differed widely in priority depending on criteria. Our results emphasize the value of explicitly incorporating uncertainty into criteria underlying remediation decisions. Comparing outcomes among alternative, plausible criteria may also help to identify research most needed to narrow management uncertainty.

Environmental Management↗

USGS2016

Organizing environmental flow frameworks to meet hydropower mitigation needs

The global recognition of the importance of natural flow regimes to sustain the ecological integrity of river systems has led to increased societal pressure on the hydropower industry to change plant operations to improve downstream aquatic ecosystems. However, a complete reinstatement of natural flow regimes is often unrealistic when balancing water needs for ecosystems, energy production, and other human uses. Thus, stakeholders must identify a prioritized subset of flow prescriptions that meet ecological objectives in light of realistic constraints. Yet, isolating aspects of flow regimes to restore downstream of hydropower facilities is among the greatest challenges of environmental flow science due, in part, to the sheer volume of available environmental flow tools in conjunction with complex negotiation-based regulatory procedures. Herein, we propose an organizational framework that structures information and existing flow paradigms into a staged process that assists stakeholders in implementing environmental flows for hydropower facilities. The framework identifies areas where regulations fall short of the needed scientific process, and provide suggestions for stakeholders to ameliorate those situations through advanced preparation. We highlight the strengths of existing flow paradigms in their application to hydropower settings and suggest when and where tools are most applicable. Our suggested framework increases the effectiveness and efficiency of the e-flow implementation process by rapidly establishing a knowledge base and decreasing uncertainty so more time can be devoted to filling knowledge gaps. Lastly, the framework provides the structure for a coordinated research agenda to further the science of environmental flows related to hydropower environments.

Environmental Management↗

USGS2021

High-speed lava flow infrasound from Kīlauea’s fissure 8 and its utility in monitoring effusion rate

The 2018 eruption of Kīlauea Volcano produced large and destructive lava flows from the fissure 8 (Ahu ‘aila ‘au) vent with flow velocities up to 17 m s −1 , highly variable effusion rates over both short (minutes) and long (hours) time scales, and a proximal channel or spillway that displayed flow features similar to open channel flow in river systems. Monitoring such dynamic vent and lava flow systems is a challenge. Our results demonstrate that infrasound, combined with ground-based observations and imagery from unoccupied aircraft systems (UAS), can be used to distinguish vent degassing activity from high-speed lava flow activity. We use spectral characteristics and the infrasound frequency index (FI) to distinguish spillway infrasound from vent infrasound. Comparing FI with flow speeds derived from UAS videos reveals that spillway infrasound only occurs when flow speeds were sufficiently high to cause a supercritical flow state and breaking waves (Froude values > 1.7), and we propose that the spillway signals are produced primarily through the interaction of the turbulent lava-free surface with the atmosphere. We show that FI can also provide a means to track bulk effusion rate. Our results indicate that infrasound offers a new way to characterize lava flow channel hydraulics and is a powerful tool for monitoring effusive eruptions when high-speed flows are possible.

Hawaii↗

USGS2015

Assessing dorsal scute microchemistry for reconstruction of shortnose sturgeon life histories

The imperiled status of sturgeons worldwide places priority on the identification and protection of critical habitats. We assessed the micro-structural and micro-chemical scope for a novel calcified structure, dorsal scutes, to be used for reconstruction of past habitat use and group separation in shortnose sturgeon ( Acipenser brevirostrum ). Dorsal scutes contained a dual-layered structure composed of a thin multi-layered translucent zone lying dorsally above a thicker multi-layered zone. Banding in the thick multi-layered zone correlated strongly with pectoral fin spine annuli supporting the presence of chronological structuring that could contain a chemical record of past environmental exposure. Trace element profiles (Sr:Ca), collected using both wavelength dispersive electron microprobe analysis and laser ablation inductively coupled mass spectrometry, suggest scutes record elemental information useful for tracing transitions between freshwater and marine environments. Moreover, mirror-image like Sr:Ca profiles were observed across the dual-zone structuring of the scute that may indicate duplication of the microchemical profile in a single structure. Additional element:calcium ratios measured in natal regions of dorsal scutes (Ba:Ca, Mg:Ca) suggest the potential for further refinement of techniques for identification of river systems of natal origin. In combination, our results provide proof of concept that dorsal scutes possess the necessary properties to be used as structures for reconstructions of past habitat use in sturgeons. Importantly, scutes may be collected non-lethally and with less injury than current structures, like otoliths and fin spines, affording an opportunity for broader application of microchemical techniques.

Environmental Biology of Fishes↗

USGS2015

Population connectivity and genetic structure of burbot ( Lota lota ) populations in the Wind River Basin, Wyoming

Burbot ( Lota lota ) occur in the Wind River Basin in central Wyoming, USA, at the southwestern extreme of the species’ native range in North America. The most stable and successful of these populations occur in six glacially carved mountain lakes on three different tributary streams and one large main stem impoundment (Boysen Reservoir) downstream from the tributary populations. Burbot are rarely found in connecting streams and rivers, which are relatively small and high gradient, with a variety of potential barriers to upstream movement of fish. We used high-throughput genomic sequence data for 11,197 SNPs to characterize the genetic diversity, population structure, and connectivity among burbot populations on the Wind River system. Fish from Boysen Reservoir and lower basin tributary populations were genetically differentiated from those in the upper basin tributary populations. In addition, fish within the same tributary streams fell within the same genetic clusters, suggesting there is movement of fish between lakes on the same tributaries but that populations within each tributary system are isolated and genetically distinct from other populations. Observed genetic differentiation corresponded to natural and anthropogenic barriers, highlighting the importance of barriers to fish population connectivity and gene flow in human-altered linked lake-stream habitats.

Wyoming↗

USGS2026

Navigating uncertainty and competing objectives: Spring chinook salmon recovery in the upper Willamette river

Globally, anadromous fish populations are threatened with extinction due to multiple factors, including river impoundments that block migration, widespread alteration of physical habitat, temperature, and flow regimes, commercial and recreational harvest, changes in biological communities, and long-term climate trends. In this synthesis, we describe how physical and biological factors, policy and law, and public resource allocation affect management of spring-run Chinook Salmon ( Oncorhynchus tshawytscha ) in the Upper Willamette River (UWR), Oregon, USA. Efforts to restore salmon populations often involve trade-offs, for example, water management decisions must account for flood control, agricultural and municipal water use, and management of other species. UWR Chinook Salmon recovery efforts are also governed by multiple laws, policies, and action agencies that in some cases have incongruent objectives. Competing and conflicting objectives, combined with uncertainty regarding the outcomes of proposed management actions, create significant challenges for decision makers. Resource limitations, regulatory constraints, and incongruent objectives have created challenges for managers in the UWR, but opportunities exist for improved adaptive management and collaboration, which could build trust and engagement among stakeholders and ultimately support the successful implementation of decision tools. A suite of decision support tools that have been used in the Willamette River basin and elsewhere across the range of Pacific salmon have the potential to enhance decision processes. These tools can be effective when decision makers and stakeholders commit to long-term, collaborative utilization of the tools for decision making, and when available resources and regulatory environments are conducive to implementation and adaptive refinement of both the decision-support tools and management plans. The general biological and institutional principles discussed for UWR Chinook Salmon in this work apply more generally to populations of anadromous fishes across their range, especially to populations in highly regulated river systems.

Oregon↗

USGS2024

Tissue distribution and temporal and spatial assessment of per- and polyfluoroalkyl substances (PFAS) in smallmouth bass (Micropterus dolomieu) in the mid-Atlantic United States

Per- and polyfluoroalkyl substances (PFAS) have become an environmental issue worldwide. A first step to assessing potential adverse effects on fish populations is to determine if concentrations of concern are present in a region and if so, in which watersheds. Hence, plasma from adult smallmouth bass Micropterus dolomieu collected at 10 sites within 4 river systems in the mid-Atlantic region of the United States, from 2014 to 2019, was analyzed for 13 PFAS. These analyses were directed at better understanding the presence and associations with land use attributes in an important sportfish. Four substances, PFOS, PFDA, PFUnA, and PFDoA, were detected in every plasma sample, with PFOS having the highest concentrations. Sites with mean plasma concentrations of PFOS below 100 ng/ml had the lowest percentage of developed landcover in the upstream catchments. Sites with moderate plasma concentrations (mean PFOS concentrations between 220 and 240 ng/ml) had low (< 7.0) percentages of developed land use but high (> 30) percentages of agricultural land use. Sites with mean plasma concentrations of PFOS > 350 ng/ml had the highest percentage of developed land use and the highest number PFAS facilities that included military installations and airports. Four of the sites were part of a long-term monitoring project, and PFAS concentrations of samples collected in spring 2017, 2018, and 2019 were compared. Significant annual differences in plasma concentrations were noted that may relate to sources and climatic factors. Samples were also collected at two sites for tissue (plasma, whole blood, liver, gonad, muscle) distribution analyses with an expanded analyte list of 28 PFAS. Relative tissue distributions were not consistent even within one species of similar ages. Although the long-chained legacy PFAS were generally detected more frequently and at higher concentrations, emerging compounds such as 6:2 FTS and GEN X were detected in a variety of tissues.

Delaware, Maryland, New York, Pennsylvania, Virgin↗

USGS2013

Thresholds in the response of free-floating plant abundance to variation in hydraulic connectivity, nutrients, and macrophyte abundance in a large floodplain river

Duckweed and other free-floating plants (FFP) can form dense surface mats that affect ecosystem condition and processes, and can impair public use of aquatic resources. FFP obtain their nutrients from the water column, and the formation of dense FFP mats can be a consequence and indicator of river eutrophication. We conducted two complementary surveys of diverse aquatic areas of the Upper Mississippi River as an in situ approach for estimating thresholds in the response of FFP abundance to nutrient concentration and physical conditions in a large, floodplain river. Local regression analysis was used to estimate thresholds in the relations between FFP abundance and phosphorus (P) concentration (0.167 mg l −1 L), nitrogen (N) concentration (0.808 mg l −1 ), water velocity (0.095 m s −1 ), and aquatic macrophyte abundance (65 % cover). FFP tissue concentrations suggested P limitation was more likely in spring, N limitation was more likely in late summer, and N limitation was most likely in backwaters with minimal hydraulic connection to the channel. The thresholds estimated here, along with observed patterns in nutrient limitation, provide river scientists and managers with criteria to consider when attempting to modify FFP abundance in off-channel areas of large river systems.

Upper Mississippi River↗

USGS1991

A reconnaissance study of halogenated organic compounds in catfish from the lower Mississippi river and its major tributaries

Blue catfish, (Ictarurus furcatus), black bullhead catfish, (Ictalurus melas), channel catfish (Ictalurus punctatus), and flathead catfish (Pylodictus olivaris), were collected along a 1200 mile river reach of the Mississippi River and its major tributaries. Tissue samples were extracted and analyzed by fused silica capillary gas chromatography/mass spectrometry (GC/MS) to determine the concentrations of hydrophobic organic halogenated contaminants that have bioconcentrated within the tissues. The compounds identified in the tissue include chlordane, polychlorinated biphenyls (PCBs), DDT and its metabolites along with several other chlorinated pesticides. The data indicates that the southern reach of the river system appears to be more contaminated than the middle and upper reaches of the study area.

Chemosphere↗

USGS1987

Concentrations of metals in mink and other mammals from Washington and Idaho

From 1981 to 1983, concentrations dfof metals were determined in mink Mustela vison , muskrats Ondatra zibethica , and small mammals at one contaminated site in Idaho and at two less contaminated sites in Idaho and Washington. The highest concentrations of Pb and Cd occurred in samples from the Coeur d'Alene River system near or downstream from an extensive mining—smelting complex in northern Idaho. Maximum concentrations of Pb in the liver of a mink (22 μg g −1 ) and in pooled liver samples of both voles ( Microtus spp. , 5·8 μg g −1 ) and deer mice ( Peromyscus maniculatus , 10·5 μg g −1 ) were higher than those inducing serious problems, including mortality, in experimental mammals on Pb-contaminated diets. Concentrations of Cd, Cu, Hg, and Zn were generally low. Declines in certain mammal populations have probably occurred in northern Idah as a result of direct toxicity of metals and associated secondary effects on cover and food supply.

Idaho, Washington↗

USGS1978

Numerical simulation of dissolved silica in the San Fancisco Bay

A two-dimensional (vertical) steady-state numerical model that simulates water circulation and dissolved-silica distributions is applied to northern San Francisco Bay. The model (1) describes the strong influence of river inflow on estuarine circulation and, in turn, on the biologically modulated silica concentration, and (2) shows how rates of silica uptake relate to silica supply and mixing rates in modifying a conservative behavior. Longitudinal silica distributions influenced by biological uptake (assuming both vertically uniform and vertically decreasing uptake situations) show that uptake rates of 1 to 10 μg-at. l −1 day −1 are sufficient to depress silica concentrations at river inflows of 100–400 m 3 s −1 , respectively, and that the higher rates appear ineffective at inflows above 400 m 3 s −1 . The simulations further indicate that higher silica utilization in the null zone is not essential to depress silica concentrations strongly there. Advective water-replacement times at river inflows of 400, 200 and 100 m 3 s −1 are computed to be less than 25, 45 and 75 days, respectively, for a 120-km estuary-river system.

California↗