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SAFRR tsunami scenario: Impacts on California ecosystems, species, marine natural resources, and fisheries

We evaluate the effects of the SAFRR Tsunami Scenario on California’s ecosystems, species, natural resources, and fisheries. We discuss mitigation and preparedness approaches that can be useful in Tsunami planning. The chapter provides an introduction to the role of ecosystems and natural resources in tsunami events (Section 1). A separate section focuses on specific impacts of the SAFRR Tsunami Scenario on California’s ecosystems and endangered species (Section 2). A section on commercial fisheries and the fishing fleet (Section 3) documents the plausible effects on California’s commercial fishery resources, fishing fleets, and communities. Sections 2 and 3 each include practical preparedness options for communities and suggestions on information needs or research. Our evaluation indicates that many low-lying coastal habitats, including beaches, marshes and sloughs, rivers and waterways connected to the sea, as well as nearshore submarine habitats will be damaged by the SAFRR Tsunami Scenario. Beach erosion and complex or high volumes of tsunami-generated debris would pose major challenges for ecological communities. Several endangered species and protected areas are at risk. Commercial fisheries and fishing fleets will be affected directly by the tsunami and indirectly by dependencies on infrastructure that is damaged. There is evidence that in some areas intact ecosystems, notably sand dunes, will act as natural defenses against the tsunami waves. However, ecosystems do not provide blanket protection against tsunami surge. The consequences of ecological and natural resource damage are estimated in the millions of dollars. These costs are driven partly by the loss of ecosystem services, as well as cumulative and follow-on impacts where, for example, increased erosion during the tsunami can in turn lead to subsequent damage and loss to coastal properties. Recovery of ecosystems, natural resources and fisheries is likely to be lengthy and expensive. Preparedness is key to enhancing resilience to ecological impacts.

California

Fisheries sustainability: Perceptions from the ninth World Fisheries Congress

The World Fisheries Congress (WFC) is one of the largest global gatherings of fisheries professionals and scientists. It is held every 4 years with the purpose of sharing ideas and perspectives about new research, emerging issues, scientific breakthroughs, and governance related to fisheries science, industry, conservation, and management. The ninth WFC, held in Seattle (USA) in 2024, focused on fish and fisheries at the food–water–energy nexus and understanding fisheries sustainability from diverse perspectives. Fisheries sustainability is a goal shared globally that faces challenges across spatial scales from the implementation of good governance and accelerating anthropogenic pressures. Leveraging the unique opportunity to gain insights from WFC delegates, this study assesses perceptions of fisheries sustainability from diverse representation across career stage, geo­graphic region, and professional and cultural backgrounds. Survey results show that respondents (i.e., WFC delegates who chose to take the survey) perceived limited progress towards fisheries sustainability, often with a variable and unclear definition of what sustainability entails. Fish were primarily valued from a provisioning resource perspective, with environmental aspects of fisheries management and conservation seen as the area with the most progress and the greatest needs, rather than economic or social dimensions of fisheries.

Fisheries

Unharvested fishes in the U. S. commercial fishery of western Lake Erie in 1969

Potential commercial fish production was estimated for U.S. waters of western Lake Erie in 1969 from pounds landed and pounds discarded. Periodic observations of catches in haul seines and trap nets revealed that about 37% of the catch (by weight) in haul seines and 26% of that in trap nets were low-value fishes that were discarded. Projection of these discarded catches to include the total fishing effort indicated that an additional 2.8 million lb of low-value species would have been landed in 1969 if a reasonable profit had been assured. It is concluded that the sustained yield could be increased considerably with only a moderate increase in fishing effort.

Special Scientific Report - Fisheries

Use of fish corrals in the seine fishery of the Virgin Islands

Although selected aspects of the commercial fishery in the Virgin Islands have been documented since the early 1930's, fish corrals and their use have not been described. This account, based on personal observations made during 1985-86, summarizes commercial fishing methods in the Virgin Islands (U.S. and British), documents the use of fish corrals, and serves as an introduction to the methodologies of this harvesting technique. Interviews of commercial fishermen about how and when fish corrals are used provided information not available from direct observation.

Marine Fisheries Review

Polyphasic characterization of Aeromonas salmonicida isolates recovered from salmonid and non-salmonid fish

Michigan's fisheries rely primarily upon the hatchery propagation of salmonid fish for release in public waters. One limitation on the success of these efforts is the presence of bacterial pathogens, including Aeromonas salmonicida, the causative agent of furunculosis. This study was undertaken to determine the prevalence of A. salmonicida in Michigan fish, as well as to determine whether biochemical or gene sequence variability exists among Michigan isolates. A total of 2202 wild, feral and hatchery-propagated fish from Michigan were examined for the presence of A. salmonicida. The examined fish included Chinook salmon, Oncorhynchus tshawytscha (Walbaum), coho salmon, O. kisutcha (Walbaum), steelhead trout, O. mykiss (Walbaum), Atlantic salmon, Salmo salar L., brook trout, Salvelinus fontinalis (Mitchill), and yellow perch, Perca flavescens (Mitchill). Among these, 234 fish yielded a brown pigment-producing bacterium that was presumptively identified as A. salmonicida. Further phenotypic and phylogenetic analyses identified representative isolates as Aeromonas salmonicida subsp. salmonicida and revealed some genetic and biochemical variability. Logistic regression analyses showed that infection prevalence varied according to fish species/strain, year and gender, whereby Chinook salmon and females had the highest infection prevalence. Moreover, this pathogen was found in six fish species from eight sites, demonstrating its widespread nature within Michigan.

Journal of Fish Diseases

Twenty five years of Federal fishery research on the Great Lakes

The major purpose of this publication is to present an annotated bibliography of papers resulting from Federal investigations on the Great Lakes fish and fisheries since the formal initiation of a continuing research program by the Fish and Wildlife Service. It is believed that this purpose can be served best by prefacing that bibliography with a brief account of the origins of Great Lakes Fishery Investigations, of the circumstances that have guided their course, and of the scientists who have participated in the several studies.

Special Scientific Report - Fisheries

Dynamic hypoxic zones in Lake Erie compress fish habitat, altering vulnerability to fishing gears

Seasonal degradation of aquatic habitats from hypoxia occurs in numerous freshwater and coastal marine systems and can result in direct mortality or displacement of fish. Yet, fishery landings from these systems are frequently unresponsive to changes in the severity and extent of hypoxia, and population-scale effects have been difficult to measure except in extreme hypoxic conditions with hypoxia-sensitive species. We investigated fine-scale temporal and spatial variability in dissolved oxygen in Lake Erie as it related to fish distribution and catch efficiencies of both active (bottom trawls) and passive (trap nets) fishing gears. Temperature and dissolved oxygen loggers placed near the edge of the hypolimnion exhibited much higher than expected variability. Hypoxic episodes of variable durations were frequently punctuated by periods of normoxia, consistent with high-frequency internal waves. High-resolution interpolations of water quality and hydroacoustic surveys suggest that fish habitat is compressed during hypoxic episodes, resulting in higher fish densities near the edges of hypoxia. At fixed locations with passive commercial fishing gear, catches with the highest values occurred when bottom waters were hypoxic for intermediate proportions of time. Proximity to hypoxia explained significant variation in bottom trawl catches, with higher catch rates near the edge of hypoxia. These results emphasize how hypoxia may elevate catch rates in various types of fishing gears, leading to a lack of association between indices of hypoxia and fishery landings. Increased catch rates of fish at the edges of hypoxia have important implications for stock assessment models that assume catchability is spatially homogeneous.

Ohio

U.S. Federal fishery research on the Great Lakes through 1956

The major purpose of this publication is to present an annotated bibliography of papers resulting from Federal investigations on the Great Lakes fish and fisheries since the formal initiation of a continuing research program by the Fish and Wildlife Service. It is believed that this purpose can be served best by prefacing that bibliography with a brief account of the origins of Great Lakes Fishery Investigations, of the circumstances that have guided their course. The present article is a revision and expansion of the author's earlier publication: 25 years of Federal Fishery Research on the Great Lakes (Special Scientific Report-Fisheries No. 85, 1952). Two circumstances made a revision desirable at this time. First, publications since 1952 have added greatly to the literature based on Federal studies on the Great Lakes. Second, the Great Lakes Fishery Commission, established by treaty with Canada, was organized in Ottowa in April 1956 and held its first annual meeting in Ann Arbor in November 1956. The entry of the Commission on the scene marks the start of an era of further expansion and heightens in past activities.

Special Scientific Report - Fisheries

Climate impacts to inland fishes: Shifting research topics over time

Climate change remains a primary threat to inland fishes and fisheries. Using topic modeling to examine trends and relationships across 36 years of scientific literature on documented and projected climate impacts to inland fish, we identify ten representative topics within this body of literature: assemblages, climate scenarios, distribution, climate drivers, population growth, invasive species, populations, phenology, physiology, and reproduction. These topics are largely similar to the output from artificial intelligence application (i.e., ChatGPT) search prompts, but with some key differences. The field of climate impacts on fish has seen dramatic growth since the mid-2000s with increasing popularity of topics related to drivers, assemblages, and phenology. The topics were generally well-dispersed with little overlap of common words, apart from phenology and reproduction which were closely clustered. Pairwise comparisons between topics revealed potential gaps in the literature including between reproduction and distribution and between physiology and phenology. A better understanding of these relationships can help capitalize on existing literature to inform conservation and sustainable management of inland fishes with a changing climate.

PLOS Climate

Temporal trends in macroscopic indicators of fish health in the South Branch of the Potomac River

Over recent decades, the South Branch of the Potomac River, WV, has experienced fish kills and episodes of suppressed health in adult fishes that have spanned small stretches to nearly 120 km of contiguous habitat. Although factors such as endocrine disruption, chemical contaminants, and infectious agents have been detected, no single causal mechanism has been identified. To gain information about the temporal nature of abnormalities, differences in life stage impacts, and potential risk factors, investigations of rank scores of macroscopic indicators of fish health were conducted utilizing seasonal and annual boat electrofishing surveys for Smallmouth Bass Micropterus dolomieu (SMB) and Golden Redhorse Moxostoma erythrurum (GDR). Gill and body abnormalities were assigned rank scores for each fish based on visual severity and were tested for correlation with seasonal climatic (flow and stream temperature) and environmental factors (stream pH, dissolved oxygen, and turbidity). Analyses between juveniles and adults for these species indicated body lesions were more common for adult GDR and gill lesions were more common for adult SMB. Significantly higher rank sums of adult gill abnormalities corresponded with heavy annual mortality of SMB from ages 2-3 (86%), the age at which this species transitions from juvenile to adult length. Higher ranks were frequently assigned to fish of both species for gill and body/fin lesions during summer and fall samples. Low stream discharges and lower pH units correlated with elevations of body raised lesion (GDR) and erosions (GDR and SMB), as well as erosions of gill lamellae (SMB). This study connects the disciplines of fisheries management, fish health, and environmental monitoring, providing information gained through tracking macroscopic conditions of these two indicator species for the focusing of future studies and better understanding risks to fish health.

West Virginia

Drivers and synergies in the management of inland fisheries: Searching for sustainable solutions

Freshwater is a shared resource. Water challenges (i.e., too much, too little, too dirty) are recognized to have global implications. Many sectors rely upon water and, in some cases, the limited availability of water leads to tough decisions. Though inland fish and fisheries play important roles in providing food security, human well-being, and ecosystem productivity, this sector is often underappreciated in water resource planning because valuation is difficult and governance is complex, unclear, or non-existent. Additionally, inland fisheries are an economically small sector and, in most cases, the value of inland fisheries will never be the main driver of decision making. At the 2015 Global Conference on Inland Fisheries, we convened a Drivers and Synergies panel and working group to discuss competing sectors (e.g., hydropower, transportation, agriculture, mining and oil and gas extraction, forestry, tourism and recreation, and aquaculture) and large-scale drivers which exist predominately outside of the water sectors (e.g., economic growth, diversifying economies, population growth, urbanization, and climate change). Drivers will influence these sectors and tradeoffs will be made. Management of sustainable inland water systems requires making informed choices emphasizing those services that will provide sustainable benefits for humans while maintaining well-functioning ecological systems.

Conference Paper

A history of human impacts on the Lake Erie fish community

The fisheries scientist working in the island region of Lake Erie has access to an extremely large and diverse freshwater fish community. It is the intention of this essay to discuss briefly that community and the impacts of human activities to provide future students and researchers with both current and historical information. Human settlements and development within the basin are discussed, followed by a description of the major stresses on the community, the impacts of those stresses, and the resulting or present-day fish community.

Book chapter

Adapting inland fisheries management to a changing climate

Natural resource decision makers are challenged to adapt management to a changing climate while balancing short-term management goals with long-term changes in aquatic systems. Adaptation will require developing resilient ecosystems and resilient management systems. Decision makers already have tools to develop or ensure resilient aquatic systems and fisheries such as managing harvest and riparian zones. Because fisheries management often interacts with multiple stakeholders, adaptation strategies involving fisheries managers and other partners focused on land use, policy, and human systems, coupled with long-term monitoring, are necessary for resilient systems. We show how agencies and organizations are adapting to a changing climate in Minnesota and Ontario lakes and Montana streams. We also present how the Florida Fish and Wildlife Commission created a management structure to develop adaptation strategies. These examples demonstrate how organizations and agencies can cope with climate change effects on fishes and fisheries through creating resilient management and ecological systems.

Fisheries

Status and future of Lake Huron fish communities

In 1993, fishery management agencies with jurisdiction over Lake Huron fish populations developed draft fish community objectives in response to the Joint Strategic Plan for Management of Great Lakes Fisheries. The Joint Strategic Plan charged the Great Lakes Fishery Commission sponsored Lake Huron Committee to define objectives for what the fish community of Lake Huron should look like in the future, and to develop means for measuring progress toward the objectives. The overall management objective for Lake Huron is to 'over the next two decades restore an ecologically balanced fish community dominated by top predators and consisting largely of self-sustaining, indigenous and naturalized species and capable of sustaining annual harvests of 8.9 million kg'. This paper represents the first attempt at consolidating current biological information from different management agencies on a lake-wide basis for the purpose of assessing the current status and dynamics of Lake Huron fishes.

Book chapter

Effects of air exposure on survival of Yellowstone Cutthroat Trout angled from a stream with warm water temperatures

We evaluated the effects of air exposure on Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri caught and released in a cold-water stream with elevated water temperatures (i.e., > 14°C) in southeastern Idaho. Anglers caught fish in a 2.3-km section of Fall Creek, Idaho, during August 2018. Sampled fish remained underwater while we measured and then tagged them with T-bar anchor tags. We exposed fish to air for 0, 30, or 60 s and then released them at the point of capture. We continuously monitored temperature during the study period. Water temperatures during the study varied from 10.0 to 19.7°C and averaged 14.9°C (SE = 0.08). In total, anglers caught 161 Yellowstone Cutthroat Trout over 10 d. Of those fish, we did not expose 54 to air; we exposed 54 to air for 30 s, and 53 for 60 s. We used electrofishing to recapture tagged fish and estimate relative survival. Relative survival was highest for fish exposed to air for 60 s (0.40 [SE = 0.25]) followed by 0 s (0.35 [SE = 0.25]) and 30 s (0.30 [SE = 0.27]), but differences were not statistically significant. Results from this study are consistent with other air-exposure studies suggesting that air exposure of 60 s or less is not likely a concern in Yellowstone Cutthroat Trout fisheries. Releasing fish as quickly as possible is always encouraged, but management regulations restricting air exposure seem unnecessary given the collective body of field-based research on air exposure. Nevertheless, similar studies on other systems and species are warranted.

Idaho

Fishing for food: Quantifying recreational fisheries harvest in Wisconsin lakes

Recreational fisheries have high economic worth, valued at US$190 billion globally. An important, but underappreciated, secondary value of recreational catch is its role as a source of food. This contribution is poorly understood due to difficulty in estimating recreational harvest at spatial scales beyond a single system, as traditionally estimated from individual creel surveys. Here, we address this gap using 28‐year creel surveys of ~300 Wisconsin inland lakes. We develop a statistical model of recreational harvest for individual lakes and then scale‐up to unsurveyed lakes (3,769 lakes; 73% of statewide lake surface area). We generate a statewide estimate of recreational lake harvest of ~4,200 metric tons and an estimated annual angler consumption rate of ~1.1 kg, nearly equal to the total estimated United States per capita freshwater fish consumption. An important ecosystem service, recreational harvest makes significant contributions to human diets and plays an often‐unheralded role in food security.

Wisconsin

Feeding response of sport fish after electrical immobilization, chemical sedation, or both

Fishery managers frequently capture wild fish for a variety of fishery management activities. Though some activities can be accomplished without immobilizing the fish, others are accomplished more readily, humanely, and safely (for both the handler and the fish) when fish are immobilized by physical (e.g., electrical immobilization) or chemical sedation. A concern regarding the use of chemical sedatives is that chemical residues may remain in the fillet tissue after the fish recovers from sedation. If those residues are harmful to humans, there is some risk that a postsedated fish released to public waters may be caught and consumed by an angler. To characterize this risk, a series of four trials were conducted. Three trials assessed feeding activity after hatchery-reared fish were electrically immobilized, chemically sedated, or both, and one trial assessed the likelihood of an angler catching a wild fish that had been electrically immobilized and chemically sedated. Results from the first trial indicated that the feeding activity of laboratory habituated fish was variable among and within species after electrical immobilization, chemical sedation, or both. Results from the second trial indicated that the resumption of feeding activity was rapid after being mildly sedated for 45 min. Results from the third trial indicated that the feeding activity of outdoor, hatchery-reared fish was relatively aggressive after fish had been chemically sedated. Results from the fourth trial indicated that the probability of capturing wild fish in a more natural environment by angling after fish had been electrically immobilized and chemically sedated is not likely, i.e., in a group of five fish caught, 3 out of 100 times one would be a fish that had been sedated.

North American Journal of Fisheries Management

Applications of a broad-spectrum tool for conservation and fisheries analysis: Aquatic gap analysis

Natural resources support all of our social and economic activities, as well as our biological existence. Humans have little control over most of the physical, biological, and sociological conditions dictating the status and capacity of natural resources in any particular area. However, the most rapid and threatening influences on natural resources typically are anthropogenic overuse and degradation. In addition, living natural resources (i.e., organisms) do not respect political boundaries, but are aware of their optimal habitat and environmental conditions. Most organisms have wider spatial ranges than the jurisdictional boundaries of environmental agencies that deal with them; even within those jurisdictions, information is patchy and disconnected. Planning and projecting effects of ecological management are difficult, because many organisms, habitat conditions, and interactions are involved. Conservation and responsible resource use involves wise management and manipulation of the aspects of the environment and biological communities that can be effectively changed. Tools and data sets that provide new insights and analysis capabilities can enhance the ability of resource managers to make wise decisions and plan effective, long-term management strategies. Aquatic gap analysis has been developed to provide those benefits. Gap analysis is more than just the assessment of the match or mis-match (i.e., gaps) between habitats of ecological value and areas with an appropriate level of environmental protection (e.g., refuges, parks, preserves), as the name suggests. Rather, a Gap Analysis project is a process which leads to an organized database of georeferenced information and previously available tools to examine conservation and other ecological issues; it provides a geographic analysis platform that serves as a foundation for aquatic ecological studies. This analytical tool box allows one to conduct assessments of all habitat elements within an area of interest. Aquatic gap analysis naturally focuses on aquatic habitats. The analytical tools are largely based on specification of the species-habitat relations for the system and organism group of interest (Morrison et al. 2003; McKenna et al. 2006; Steen et al. 2006; Sowa et al. 2007). The Great Lakes Regional Aquatic Gap Analysis (GLGap) project focuses primarily on lotic habitat of the U.S. Great Lakes drainage basin and associated states and has been developed to address fish and fisheries issues. These tools are unique because they allow us to address problems at a range of scales from the region to the stream segment and include the ability to predict species specific occurrence or abundance for most of the fish species in the study area. The results and types of questions that can be addressed provide better global understanding of the ecological context within which specific natural resources fit (e.g., neighboring environments and resources, and large and small scale processes). The geographic analysis platform consists of broad and flexible geospatial tools (and associated data) with many potential applications. The objectives of this article are to provide a brief overview of GLGap methods and analysis tools, and demonstrate conservation and planning applications of those data and tools. Although there are many potential applications, we will highlight just three: (1) support for the Eastern Brook Trout Joint Venture (EBTJV), (2) Aquatic Life classification in Wisconsin, and (3) an educational tool that makes use of Google Earth (use of trade or product names does not imply endorsement by the U.S. Government) and Internet accessibility.

Gap Analysis Bulletin