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At least 73 records · Page 4Linked to original sources

Fish movement and habitat use depends on water body size and shape

Home ranges are central to understanding habitat diversity, effects of fragmentation and conservation. The distance that an organism moves yields information on life history, genetics and interactions with other organisms. Present theory suggests that home range is set by body size of individuals. Here, we analyse estimates of home ranges in lakes and rivers to show that body size of fish and water body size and shape influence home range size. Using 71 studies including 66 fish species on five continents, we show that home range estimates increased with increasing water body size across water body shapes. This contrasts with past studies concluding that body size sets home range. We show that water body size was a consistently significant predictor of home range. In conjunction, body size and water body size can provide improved estimates of home range than just body size alone. As habitat patches are decreasing in size worldwide, our findings have implications for ecology, conservation and genetics of populations in fragmented ecosystems. ?? 2008 Blackwell Munksgaard.

Ecology of Freshwater Fish↗

Evaluating the effect of salinity on a simulated American Crocodile ( Crocodylus acutus ) population with applications to conservation and Everglades restoration

Everglades restoration will alter the hydrology of South Florida, affecting both water depth and salinity levels in the southern fringes of the Everglades, the habitat of the endangered American crocodile ( Crocodylus acutus ). A key question is what the effects of these hydrologic changes will be on the crocodile population. Reliable predictions of the viability of endangered species under a variety of management scenarios are of vital importance in conservation ecology. Juvenile American crocodiles are thought to be sensitive to high salinity levels, suffering reduced mass, and potentially reduced survivorship and recruitment. This could negatively impact the population recovery. We addressed the management issue of how the crocodile population will respond to alterations in hydrology with a spatially explicit individual-based model. The model is designed to relate water levels, salinities, and dominant vegetation to crocodile distribution, abundance, population growth, individual growth, survival, nesting effort, and nesting success. Our analysis shows that Everglades restoration, through its effects on water flow to estuaries, may benefit crocodile populations if increased freshwater flow reduces the chance that regional salinity levels exceed levels where small individuals lose mass. In addition, we conclude that conservation priority should be placed on reducing anthropogenic sources of mortality on large individuals, such as road mortality. Finally, research should focus on estimates of annual survivorship for large individuals.

Florida↗

Acoustic telemetry and fisheries management

This paper reviews the use of acoustic telemetry as a tool for addressing issues in fisheries management, and serves as the lead to the special Feature Issue of Ecological Applications titled “Acoustic Telemetry and Fisheries Management” . Specifically, we provide an overview of the ways in which acoustic telemetry can be used to inform issues central to the ecology, conservation, and management of exploited and/or imperiled fish species. Despite great strides in this area in recent years, there are comparatively few examples where data have been applied directly to influence fisheries management and policy. We review the literature on this issue, identify the strengths and weaknesses of work done to date, and highlight knowledge gaps and difficulties in applying empirical fish telemetry studies to fisheries policy and practice. We then highlight the key areas of management and policy addressed, as well as the challenges that needed to be overcome to do this. We conclude with a set of recommendations about how researchers can, in consultation with stock assessment scientists and managers, formulate testable scientific questions to address and design future studies to generate data that can be used in a meaningful way by fisheries management and conservation practitioners. We also urge the involvement of relevant stakeholders (managers, fishers, conservation societies, etc.) early on in the process (i.e. in the co-creation of research projects), so that all priority questions and issues can be addressed effectively.

Ecological Applications↗

Exploiting common senses: Sensory ecology meets wildlife conservation and management

Multidisciplinary approaches to conservation and wildlife management are often effective in addressing complex, multi-factor problems. Emerging fields such as conservation physiology and conservation behaviour can provide innovative solutions and management strategies for target species and systems. Sensory ecology combines the study of ‘how animals acquire’ and process sensory stimuli from their environments, and the ecological and evolutionary significance of ‘how animals respond’ to this information. We review the benefits that sensory ecology can bring to wildlife conservation and management by discussing case studies across major taxa and sensory modalities. Conservation practices informed by a sensory ecology approach include the amelioration of sensory traps, control of invasive species, reduction of human–wildlife conflicts and relocation and establishment of new populations of endangered species. We illustrate that sensory ecology can facilitate the understanding of mechanistic ecological and physiological explanations underlying particular conservation issues and also can help develop innovative solutions to ameliorate conservation problems.

Conservation Physiology↗

Desert Tortoise translocation plan for the U.S. Department of the Army National Training Center and Fort Irwin Western Training Area

The U.S. Department of the Army proposes to commence military activity at the Fort Irwin National Training Center within the Western Training Area (WTA) and to translocate Mojave Desert tortoises ( Gopherus agassizii ; hereafter tortoise) that will be affected to the Western Training Area Translocation Site (WTATS). This desert tortoise translocation plan provides a timeline of activities, actions for which permits may be required, and guidelines for assessing the short-term and long-term success of this desert tortoise translocation. Importantly, the monitoring projects described are designed to document the ultimate effects of the Army's translocation action (not just inform future translocations elsewhere). Results from the translocation, corresponding monitoring, and research projects will inform future translocations throughout the Mojave Desert for expanding human development. The plan has three main objectives: (1) provide guidelines to achieve a safe, humane, and successful translocation of tortoises from the WTA, with minimal effect to resident desert tortoises at sites where translocated animals are released (recipient sites); (2) study translocated, resident, and reference animals (tortoises living near translocation areas but whose home ranges do not overlap those of translocated or resident tortoises) to learn as much as possible about the ecology, conservation, and management of the desert tortoise; and (3) define best management practices for successful translocation and provide metrics to evaluate success over multiple time scales, which we identify for the short- and long-term. The procedures to plan, implement, monitor, and study translocation of tortoises were written using terms and conditions outlined in the U.S. Fish and Wildlife Service Biological Opinion 2021 that described effects of the expansion of the military base boundary, as well as recommendations provided in the Desert Tortoise Recovery Plan (and 5-year review). We provide guidance on appropriate translocation timing and procedures, as well as on how tortoise ecology and habitat can best be studied to further knowledge on tortoise translocation. The plan provides analysis for landscape tortoise density and abundance estimates, suitable sites for translocation of tortoises, and short- and long-term metrics that are addressed and measured by specific monitoring and research projects that can be used to assess the success of translocation activities.

California↗

Simultaneous modeling of habitat suitability, occupancy, and relative abundance: African elephants in Zimbabwe

The recent development of statistical models such as dynamic site occupancy models provides the opportunity to address fairly complex management and conservation problems with relatively simple models. However, surprisingly few empirical studies have simultaneously modeled habitat suitability and occupancy status of organisms over large landscapes for management purposes. Joint modeling of these components is particularly important in the context of management of wild populations, as it provides a more coherent framework to investigate the population dynamics of organisms in space and time for the application of management decision tools. We applied such an approach to the study of water hole use by African elephants in Hwange National Park, Zimbabwe. Here we show how such methodology may be implemented and derive estimates of annual transition probabilities among three dry-season states for water holes: (1) unsuitable state (dry water holes with no elephants); (2) suitable state (water hole with water) with low abundance of elephants; and (3) suitable state with high abundance of elephants. We found that annual rainfall and the number of neighboring water holes influenced the transition probabilities among these three states. Because of an increase in elephant densities in the park during the study period, we also found that transition probabilities from low abundance to high abundance states increased over time. The application of the joint habitat–occupancy models provides a coherent framework to examine how habitat suitability and factors that affect habitat suitability influence the distribution and abundance of organisms. We discuss how these simple models can further be used to apply structured decision-making tools in order to derive decisions that are optimal relative to specified management objectives. The modeling framework presented in this paper should be applicable to a wide range of existing data sets and should help to address important ecological, conservation, and management problems that deal with occupancy, relative abundance, and habitat suitability.

Hwange National Park↗

Recruitment phenology and pelagic larval duration in Caribbean amphidromous fishes

Amphidromous fishes are major components of oceanic tropical island stream ecosystems, such as those of the Caribbean island, Puerto Rico. Fishes with this life history face threats related to the requirement for connectivity between freshwater and marine environments during early life stages. Pelagic larval duration and recruitment phenology are 2 early life-history processes that are crucial for the biology, ecology, conservation, and management of amphidromous fishes. However, these processes are understudied in the Caribbean in general and have never been quantified in Puerto Rico. We quantified recruit abundance, recruitment phenology, and pelagic larval duration of several Caribbean amphidromous fish species in multiple rivers in Puerto Rico and explored the effects of environmental variables on recruit abundances. Two fish taxa—sirajo goby ( Sicydium spp.) and River Goby ( Awaous banana )—were exceptionally abundant as postlarvae and recruited to Caribbean rivers in pulsed migration episodes that were periodic at annual and lunar scales. Sirajo goby and River Goby recruit abundances varied among rivers, were greater at sunrise than at sunset, and were positively related to river discharge. The pelagic larval duration of 4 fish taxa ranged from a minimum of 28 d to a maximum of 103 d with means between 43 ± 7 d (SD) and 65 ± 11 d. We identified the last-quarter moon phase during the months of June through January as periods of maximum amphidromous fish recruitment to freshwater streams. The results and conclusions of our study can be applied to identify critical times to maintain river–ocean connectivity and stream flow for the benefit of the amphidromous fish population dynamics, stream ecology, and natural resources of the Caribbean.

Puerto Rico↗

Spatially realistic dynamic N-mixture models

Dispersal is a complex ecological process that can be driven by the abiotic environment, density-dependent processes and species mobility. Traditionally, dispersal has been studied with capture-based data that are often limited in space and time. More recently, spatial dynamic N-mixture models (i.e. N-mixture models accounting for dispersal among local populations and changes in abundance over time) allow the study of dispersal with count data. However, current spatial dynamic N-mixture models focus mainly on distance-based dispersal, limiting our ability to evaluate realistic patterns and drivers of dispersal at relevant spatial and temporal scales. We developed a spatially realistic dynamic N-mixture model that allows dispersal to be driven by environmental conditions and population density. Using simulations, we evaluated the inferential performance of this model when large proportions of sites are unsurveyed and the survey period is short, situations that are typical of real-world studies. We then used two case studies to illustrate the applications of this model, one representing a species with limited mobility in fragmented habitat (Chiricahua Leopard Frogs, Lithobates chiricahuensis , in isolated ponds) and the other representing a species with great mobility in continuous heterogeneous habitat (Common Nighthawks, Chordeiles minor , in grasslands). Our simulation study showed that the model provides valid inference even when the number of surveyed sites is small (𝑛 =10) or when the survey period is short for dynamic models (5 years), indicating that the model could have great practical value in real-world studies. The case study of Chiricahua Leopard Frogs showed that the model is capable of revealing pond-type-specific dispersal and predicting dispersal among ponds. The case study of Common Nighthawks showed the ability of the model to reveal the effect of primary productivity on dispersal and to map dispersal across the study area. Our effort demonstrates the potential of using count data to gain insights about complex yet realistic dispersal processes. The model that we introduce is flexible and adaptable for a broad range of situations in population and conservation ecology

Arizona, Kansas↗

Dispersal and spatial heterogeneity: Single species

A recent result for a reaction-diffusion equation is that a population diffusing at any rate in an environment in which resources vary spatially will reach a higher total equilibrium biomass than the population in an environment in which the same total resources are distributed homogeneously. This has so far been proven by Lou for the case in which the reaction term has only one parameter, m ( x ) "> m ( x ) m(x) , varying with spatial location x "> x x , which serves as both the intrinsic growth rate coefficient and carrying capacity of the population. However, this striking result seems rather limited when applies to real populations. In order to make the model more relevant for ecologists, we consider a logistic reaction term, with two parameters, r ( x ) "> r ( x ) r(x) for intrinsic growth rate, and K ( x ) "> K ( x ) K(x) for carrying capacity. When r ( x ) "> r ( x ) r(x) and K ( x ) "> K ( x ) K(x) are proportional, the logistic equation takes a particularly simple form, and the earlier result still holds. In this paper we have established the result for the more general case of a positive correlation between r ( x ) "> r ( x ) r(x) and K ( x ) "> K ( x ) K(x) when dispersal rate is small. We review natural and laboratory systems to which these results are relevant and discuss the implications of the results to population theory and conservation ecology.

Journal of Mathematical Biology↗

Microhabitat and biology of Sphaerium striatinum in a central New York stream

In many lotic systems, drastic declines in freshwater bivalve populations, including fingernail clams (Sphaeriidae), have created concerns about biodiversity and future ecosystem services. We examined the local occurrence of the historically common fingernail clam, Sphaerium striatinum , in a central New York stream. We sampled the density of sphaeriids and measured the associated habitat variables (substrate, depth, water flow) to test within-stream multivariate benthic microhabitat association. Size distribution, density, and diel feeding periodicity were measured as focal aspects of fingernail clam biology and ecology. S. striatinum tended to be found in microhabitats that had harder substrates and faster flow. The Labrador Creek fingernail clam local population had positive indicators (size distribution, density). There was significant diel periodicity in feeding behavior. The clams fed most actively during the 0400–0800 h periods. This kind of behavioral periodicity can indicate a significant ecological interaction between predators and bivalve prey. Increased understanding of the behavioral ecology of small native freshwater bivalves in an unimpacted headwater stream is a fundamental building block for development of overall ecological conservation goals for freshwater bivalves and their lotic habitats.

New York↗

Forecasting water levels using the ConvLSTM algorithm in the Everglades, USA

Forecasting water levels in complex ecosystems like wetlands can support effective water resource management, ecological conservation, and understanding surface and groundwater hydrology. Predictive models can be used to simulate the complex interactions among natural processes, hydrometeorological factors, and human activities. The Greater Everglades in the USA is a well-known example of an ecosystem where complexity has motivated adoption of machine learning algorithms in water level prediction studies. This paper aims to contribute to extending existing machine learning algorithms by integrating spatiotemporal data with deep-learning algorithms in the forecasting process. In this study, a deep-learning model is developed to predict water levels on a regional scale, covering a large area of approximately 9,138 square kilometers in the Everglades ecosystem. This model has the architecture of Convolutional Long Short-Term Memory which can deal with spatiotemporal data by capturing both spatial and temporal dependencies in the training data. The forecasting capabilities of this model (referred to as the global model) are assessed by comparing the global model to two Artificial Neural Networks developed at two different gaging stations, referred to here as local models. One local model is developed at a gaging station directly influenced by nearby water control structures, whereas the other is developed at a gaging station located farther away from these structures. By leveraging data from the Everglades Depth Estimation Network spanning from January 2002 to May 2023, the global and local models were trained to forecast water levels with a two-day lead time. Our findings suggest that both the global and local models perform with approximately the same level of accuracy, with Mean Absolute Relative Error values ranging from 0.38% to 1.4% at the selected stations. The developed global model has demonstrated strong potential as a standalone forecasting tool for the entire study area in the Everglades and could eliminate the need for developing multiple local models. This finding also highlights how machine learning can capture complex spatial and temporal relationships to generate accurate water level predictions on a regional scale.

Florida↗

Same view through a different lens: Comparing population trends for North American birds using eBird and the Breeding Bird Survey

Confidently estimating population trends is of vital importance for a wide range of ecological, conservation, and management applications. North America has 2 major data sources for estimating population trends of breeding birds—the North American Breeding Bird Survey (BBS) and the global participatory science project eBird. Because the surveys differ in protocols, coverage, and data analysis, their trend estimates are expected to vary in magnitude, direction, and/or precision for at least some species and regions. Here, we compare independently derived estimates of population change between 2012 and 2022 for every combination of species and bird conservation region (BCR) covered by both surveys ( n = 5,577 combinations) as well as aggregated across entire ranges or within the U.S. or Canada. Uncertainty was substantial for both surveys, though more prevalent for BBS (81% of credibility intervals for estimates included zero) than eBird (34% of confidence intervals overlapped zero). We found agreement of trend directions between the 2 surveys. Only 1.3% of estimated trends were significant in opposite directions between the 2 surveys for all species/BCR combinations, with the median difference in trend magnitude being –0.02% (BBS minus eBird trend). Correlations between the 2 were strongest for estimates that were graded as being high credibility compared to estimates judged to have medium or low credibility. Both surveys were subject to species, taxonomic, and regional effects that influenced agreement. Overall, we show where trend estimates derived from BBS and eBird agree, explore where they diverge, present several comparisons to assist in interpreting results from both surveys, and inform efforts to integrate information from each.

Ornithological Applications↗

Weather events influence survival and recruitment of Coereba flaveola (Bananaquit) in the Caribbean

The West Indies is considered a biodiversity hotspot and a priority for ecological conservation efforts. Understanding how environmental conditions influence the survival of resident avifauna is an important information need given the predicted increases in drought and the frequency and intensity of severe storms in the region. Throughout much of the Caribbean, Coereba flaveola (Bananaquit) are widespread and abundant, traits that may facilitate understanding their response to environmental changes in the region. We used a 10-yr capture–mark–recapture data set to examine C. flaveola survival, recruitment, population growth, and age structure in the context of monthly and seasonal precipitation and temperatures, drought conditions, and occurrence and intensity of storm events. Our models suggested wing length, occurrence of storms, and drought all influenced survival. Both the incidence of storms and drier-than-average conditions in the preceding wet season (April–June) decreased survival. The sex of bird and net hours influenced capture probability, but weather influences on recruitment were equivocal. During nonstorm years, mean population growth was stable at 1.019 (95% confidence interval [CI]: 0.962, 1.098) but dropped to 0.843 (95% CI: 0.795, 0.846) in storm years. Increasing frequency of storms, such as back-to-back years, would likely push the growth rate lower. A protracted pattern of increased storm frequency, especially if coupled with a subsequent drought during the wet season, may lead to localized extirpations or strongly reduced populations.

British Virgin Islands, Guana Island↗

Changes in capture rates and body size among vertebrate species occupying an insular urban habitat reserve

Long‐term ecological monitoring provides valuable and objective scientific information to inform management and decision‐making. In this article, we analyze 22 years of herpetofauna monitoring data from the Point Loma Ecological Conservation Area (PLECA), an insular urban reserve near San Diego, CA. Our analysis showed that counts of individuals for one of the four most common terrestrial vertebrates declined, whereas counts for other common species increased or remained stable. Two species exhibited declines in adult body length, whereas biomass pooled over the five most common species increased over time and was associated with higher wet season precipitation. Although the habitat and vegetation at PLECA have remained protected and intact, we suspect that changes in arthropod communities may be driving changes in the abundance, growth, and development of insectivorous lizards. This study underscores the value of long‐term monitoring for establishing quantitative baselines to assess biological changes that would otherwise go undetected.

California↗

Characteristics of foraging sites and protein status in wintering muskoxen: insights from isotopes of nitrogen

Identifying links between nutritional condition of individuals and population trajectories greatly enhances our understanding of the ecology, conservation, and management of wildlife. For northern ungulates, the potential impacts of a changing climate to populations are predicted to be nutritionally mediated through an increase in the severity and variance in winter conditions. Foraging conditions and the availability of body protein as a store for reproduction in late winter may constrain productivity in northern ungulates, yet the link between characteristics of wintering habitats and protein status has not been established for a wild ungulate. We used a non‐invasive proxy of protein status derived from isotopes of N in excreta to evaluate the influence of winter habitats on the protein status of muskoxen in three populations in Alaska (2005–2008). Multiple regression and an information‐theoretic approach were used to compare models that evaluated the influence of population, year, and characteristics of foraging sites (components of diet and physiography) on protein status for groups of muskoxen. The observed variance in protein status among groups of muskoxen across populations and years was partially explained (45%) by local foraging conditions that affected forage availability. Protein status improved for groups of muskoxen as the amount of graminoids in the diet increased (−0.430 ± 0.31, β± 95% CI) and elevation of foraging sites decreased (0.824 ± 0.67). Resources available for reproduction in muskoxen are highly dependent upon demographic, environmental, and physiographic constraints that affect forage availability in winter. Due to their very sedentary nature in winter, muskoxen are highly susceptible to localized foraging conditions; therefore, the spatial variance in resource availability may exert a strong effect on productivity. Consequently, there is a clear need to account for climate–topography effects in winter at multiple scales when predicting the potential impacts of climatic shifts on population trajectories of muskoxen.

Oikos↗

INHABIT: A web-based decision support tool for invasive plant species habitat visualization and assessment across the contiguous United States

Narrowing the communication and knowledge gap between producers and users of scientific data is a longstanding problem in ecological conservation and land management. Decision support tools (DSTs), including websites or interactive web applications, provide platforms that can help bridge this gap. DSTs can most effectively disseminate and translate research results when producers and users collaboratively and iteratively design content and features. One data resource seldom incorporated into DSTs are species distribution models (SDMs), which can produce spatial predictions of habitat suitability. Outputs from SDMs can inform management decisions, but their complexity and inaccessibility can limit their use by resource managers or policy makers. To overcome these limitations, we present the Invasive Species Habitat Tool (INHABIT), a novel, web-based DST built with R Shiny to display spatial predictions and tabular summaries of habitat suitability from SDMs for invasive plants across the contiguous United States. INHABIT provides actionable science to support the prevention and management of invasive species. Two case studies demonstrate the important role of end user feedback in confirming INHABIT’s credibility, utility, and relevance.

PLoSOne↗

Groundwater and surface-water interaction and effects of pumping in a complex glacial-sediment aquifer, phase 2, east-central Massachusetts

The U.S. Geological Survey, in cooperation with the Town of Framingham, Massachusetts, has investigated the potential of proposed groundwater withdrawals at the Birch Road well site to affect nearby surface water bodies and wetlands, including Lake Cochituate, the Sudbury River, and the Great Meadows National Wildlife Refuge in east-central Massachusetts. In 2012, the U.S. Geological Survey developed a Phase 1 numerical groundwater model of a complex glacial-sediment aquifer to synthesize hydrogeologic information and simulate potential future pumping scenarios. The model was developed with MODFLOW-NWT, an updated version of a standard USGS numerical groundwater flow modeling program that improves solution of unconfined groundwater flow problems. The groundwater model and investigations of the aquifer improved understanding of groundwater–surface-water interaction and the effects of groundwater withdrawals on surface-water bodies and wetlands in the study area. The initial work also revealed a need for additional information and model refinements to better understand this complex aquifer system. In this second phase of the study, the original groundwater flow model was revised to improve representation of groundwater and surface-water hydrology, stabilize the model, and reduce model error. The model was simplified by reducing the number of layers from 5 to 3 and adding the MODFLOW lake package (LAK) to simulate Lake Cochituate and Pod Meadow Pond and better represent interaction between the lakes and the aquifer. Model revisions improved stability and shortened run times, allowing use of automated parameter estimation software (PEST) to further refine the model hydraulic parameters and reduce simulation errors. Model simulations indicate that under average base-flow conditions, the Birch Road wells have a small effect on flow in the Sudbury River during most months, even at the maximum pumping rate of 4.9 ft 3 /s (3.17 Mgal/d). Maximum percent streamflow depletion in the Sudbury River caused by simulated pumping takes place during simulated drought conditions, when streamflow decreased by as much as 21 percent under maximum continuous pumping. Simulations also indicate that groundwater withdrawals at the Birch Road site could be managed so that adverse streamflow impacts are substantially ameliorated. Under the most ecologically conservative simulated drought conditions, simulated streamflow depletion was reduced from 21 percent to 3 percent by pumping at the maximum rate for 6 months rather than for 12 months. Simulations that return 10 percent of the Birch Road well withdrawals to Pod Meadow Pond indicate a modest reduction in the Sudbury River streamflow depletion and provide a larger percentage increase to streamflow just downstream of the pond. The groundwater model also indicates that well locations can have a large effect on the sustainable pumping rate and so should be chosen carefully. The model provides a tool for evaluating alternative pumping rates and schedules not included in this analysis.

Massachusetts↗

Rowing in the same direction using MIX— A tool to initiate the melding of individual disciplinary experts into an integrated interdisciplinary team

A common problem for interdisciplinary sustainability research is that scientists trained in different disciplines are often not rowing their boat effectively in the same direction. Sustainability tools can aid the implementation of this team-melding process. Here, our purpose is to illustrate our M ulti-step I ntegrated graphical and structured discussion e X ercise ( MIX ) tool that transforms diverse disciplinary experts into an interdisciplinary team. We use a visual puzzle-solving approach based on the blind men and the elephant metaphor (BMEM) because this story illustrates the shortcomings of siloed viewpoints and the need to integrate multiple perspectives. Our six-step MIX tool provides step-specific objectives, group activities, discussion questions, and learning outcomes. Activities promote experiential learning for team problem solving. The step-specific structured discussions are designed to get each individual to change their focus from their own discipline (i.e., an elephant trunk, tail, leg, or other isolated pieces of the whole animal) to the team’s interdisciplinary goal (i.e., the whole elephant or the entire multi-faceted problem). In our example proof of concept, we show that a narrow focus on only economic yield (trunk), ecological conservation (legs), or human values (tail) misrepresents the biologically involved sustainability problem (elephant) and blocks innovative solutions.

Sustainability↗