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Hydrogeologic characterization of the Cahuilla Valley and Terwilliger Valley Groundwater Basins, Riverside County, California

The relation between the groundwater and the amount of natural recharge to the Cahuilla Valley and Terwilliger Valley groundwater basins is not well understood. During the 20th century, the reliance on groundwater near Anza, California, used for agricultural, domestic, and municipal reasons has increased, and there is the potential for changes in groundwater availability related to climate change. Several types of existing data were evaluated, and new data were collected for this study, with the goal of characterizing the region’s hydrogeology. The study’s scope included constructing a geologic framework model to show where the groundwater-bearing units are present and their relation to each other, estimating the major components of the groundwater budget, and understanding local short-term and regional long-term groundwater flow and how that has changed since the early 1900s. Two electrical resistivity tomography surveys were done in the Durasno Valley about 2,150 feet apart to identify the thickness of the alluvium, its horizontal extent, and the depth-to-basement along two profiles perpendicular to Cahuilla Creek. The subsurface sediments were mostly horizontally layered and the transitional boundary between the alluvium and basement was thinner and shallower along the upgradient profile where the depth-to-basement was about 70 feet below land surface; the depth-to-basement at the downgradient profile was more than about 140 feet below land surface. The results from the surveys were used to place four monitoring wells at two sites along the survey profiles. Artesian flow from the deepest well at the downgradient site indicated that the decomposed and competent basement likely contributed some groundwater to the overlying alluvium, laterally, from below, or both. A digital three-dimensional geologic framework model was constructed using EarthVision software to represent the subsurface geometry of the alluvium, decomposed basement, and competent basement. Maps and cross sections of the modeled thicknesses of the alluvium and decomposed basement, and the modeled elevation of the top of the competent basement, were made to show the subsurface geometry of vertical faults, selected wells, and the groundwater-bearing units. Because natural recharge is related to the variable cycles of precipitation, estimates are difficult to quantify. Recharge and runoff have extreme interannual variability in the study area; recharge and runoff can be sporadic, and a substantive amount may not occur in some years. Estimates of recharge from a previous study and the regional-scale Basin Characterization Model for California for four different periods ranged from 3,800 acre-feet/year for 1897–1947 to 5,900 acre-feet/year for 1971–2000. Potential recharge from the disposal of domestic septic systems may have been as much as 500 acre-feet in 2020. It was estimated that between about 400 and 2,400 acre-feet/year of groundwater is lost through evapotranspiration by vegetation and evaporation from open water bodies, but the main source of discharge is through pumpage, mainly used for agriculture from the alluvium in the Cahuilla Valley and Terwilliger Valley groundwater basins. The estimated total pumpage for 1991–2021 ranged from about 1,140 acre-feet in 2019 to about 3,450 acre-feet in 1994. When summed, the cumulative amount of estimated pumpage between 1991 and 2021 was about 81,400 acre-feet. The general direction of groundwater flow is from the northeast along the San Jacinto fault zone at the headwaters of Cahuilla and Hamilton Creeks, to the surface-water outlets at the west and southeast parts of the study area. Groundwater-level data from the 1950s and earlier indicate that there was a natural groundwater divide between the Cahuilla Valley and Terwilliger Valley groundwater basins, but the changing magnitude and extent of the groundwater depressions caused by pumping since about 1950 indicate that the location of the natural groundwater boundary between the Cahuilla Valley and Terwilliger Valley groundwater basins has migrated over time. Flow from the upper to the lower parts of the Cahuilla Valley groundwater basin roughly follows the course of Cahuilla Creek through the narrow Durasno Valley where an estimated volume of flow in April 2019 was about 10–150 acre-feet/year. Short-term trends in groundwater levels, particularly in wells where groundwater is shallow and in the basement unit, show how some areas respond quickly to recharge and discharge. Wells located further to the east within the Cahuilla Valley groundwater basin in the alluvium show much less of a response to recharge events; areas of sustained pumpage from the alluvium, primarily for agriculture, show long-term declines in groundwater levels and generally do not show the effects of storm events or recent runoff. Groundwater levels in wells that are farthest from where most of the recharge occurs and where pumping has been the greatest, had some of the largest long-term groundwater-level declines at a rate of about 0.8 foot/year between 1971 and 2021.

California

Irrigation as a fuel pump to freshwater ecosystems

We generated a detailed time series of total dissolved hydrolyzable amino acids (DHAA) in a watershed dominated by irrigated agriculture in northern California, USA to investigate the roles of hydrologic and seasonal changes on the composition of dissolved organic matter (DOM). DHAA are sensitive indicators of the degradation state and reactivity of DOM. DHAA concentrations ranged from 0.55 to 9.96 μM (median 3.51 ± 1.80 μM), with expected peaks during high-discharge storms and unexpected high values throughout the low-discharge irrigation season. Overall, summer irrigation was a critical hydrologic regime for DOM cycling since it mobilized DOM similar in concentration and reactivity to DOM released during storms. Together, irrigation and storm flows exported DOM with (1) the largest DHAA contributions to the dissolved organic carbon and the dissolved organic nitrogen pools, (2) the largest proportion of basic amino acids, and (3) the lowest degradation extent based on multiple indices. In this highly disturbed terrestrial system, UV–vis absorbance did not correlate with DHAA concentrations, while classic interpretations of common amino acid indicators (e.g., proportion of basic amino acids, degradation index, percent of non-protein amino acids) were prone to conflicting characterizations of DOM reactivity. Therefore, a new parameter (processing ratio, PR) derived from individual amino acid concentrations was developed that demonstrated a strong potential for mechanistic-driven characterization of the extent of DOM diagenesis in freshwaters. Irrigated agriculture altered stream biogeochemistry by releasing a continuous supply of reactive DOM (lowest PR values), thereby providing an additional energy source to downstream ecosystems.

California

Mediterranean California’s water use future under multiple scenarios of developed and agricultural land use change

With growing demand and highly variable inter-annual water supplies, California’s water use future is fraught with uncertainty. Climate change projections, anticipated population growth, and continued agricultural intensification, will likely stress existing water supplies in coming decades. Using a state-and-transition simulation modeling approach, we examine a broad suite of spatially explicit future land use scenarios and their associated county-level water use demand out to 2062. We examined a range of potential water demand futures sampled from a 20-year record of historical (1992–2012) data to develop a suite of potential future land change scenarios, including low/high change scenarios for urbanization and agriculture as well as “lowest of the low” and “highest of the high” anthropogenic use. Future water demand decreased 8.3 billion cubic meters (Bm 3 ) in the lowest of the low scenario and decreased 0.8 Bm 3 in the low agriculture scenario. The greatest increased water demand was projected for the highest of the high land use scenario (+9.4 Bm 3 ), high agricultural expansion (+4.6 Bm 3 ), and high urbanization (+2.1 Bm 3 ) scenarios. Overall, these scenarios show agricultural land use decisions will likely drive future demand more than increasing municipal and industrial uses, yet improved efficiencies across all sectors could lead to potential water use savings. Results provide water managers with information on diverging land use and water use futures, based on historical, observed land change trends and water use histories.

California

Accumulation of pesticides in pacific chorus frogs (Pseudacris regilla) from California's Sierra Nevada Mountains, USA

Pesticides are receiving increasing attention as potential causes of amphibian declines, acting singly or in combination with other stressors, but limited information is available on the accumulation of current-use pesticides in tissue. The authors examined potential exposure and accumulation of currently used pesticides in pond-breeding frogs (Pseudacris regilla) collected from 7 high elevations sites in northern California. All sites sampled are located downwind of California's highly agricultural Central Valley and receive inputs of pesticides through precipitation and/or dry deposition. Whole frog tissue, water, and sediment were analyzed for more than 90 current-use pesticides and pesticide degradates using gas chromatography–mass spectrometry. Two fungicides, pyraclostrobin and tebuconazole, and one herbicide, simazine, were the most frequently detected pesticides in tissue samples. Median pesticide concentration ranged from 13 µg/kg to 235 µg/kg wet weight. Tebuconazole and pyraclostrobin were the only 2 compounds observed frequently in frog tissue and sediment. Significant spatial differences in tissue concentration were observed, which corresponded to pesticide use in the upwind counties. Data generated indicated that amphibians residing in remote locations are exposed to and capable of accumulating current-use pesticides. A comparison of P. regilla tissue concentrations with water and sediment data indicated that the frogs are accumulating pesticides and are potentially a more reliable indicator of exposure to this group of pesticides than either water or sediment.

California

Using Landsat and MODIS satellite collections to examine extent, timing, and potential impacts of surface water inundation in California croplands☆

The state of California, United States of America produces many crop products that are both utilized domestically and exported throughout the world. With nearly 39,000 km 2 of croplands, monitoring unintentional and intentional surface water inundation is important for water resource management and flood hazard readiness. We examine inundation dynamics in California croplands from 2003 to 2020 by intersecting monthly surface water maps (n = 216 months) derived using two satellite remote sensing platforms (Landsat and Moderate Resolution Imaging Spectroradiometer [MODIS]) with a high-quality cropland map generated by the California Department of Water Resources. Surface water maps were produced using the Dynamic Surface Water Extent model, in which satellite image pixels are classified into different levels of detection confidence. Our analysis focused on calculating monthly and annual occurrence of “high confidence” water for each satellite collection across eight cropland types and 58 counties. Results indicate that 49.9% (MODIS) to 56.4% (Landsat) of croplands were inundated at least once during the 18-year timespan. Rice crops, due to their unique need of consistent surface water and dominance as a crop type in CA, had the highest proportion of and mean annual inundation area, while citrus crops had the lowest. Mean monthly inundation patterns in most croplands followed California's precipitation patterns with high inundation during the winter and spring rainy season. At the county level, croplands in the southern Central Valley typically had high occurrences of inundation in conjunction with large crop areas. Exposure and sensitivity of inundation for three crop types (citrus, deciduous, and vineyards) that are typically less associated with intentional inundation were geographically variable, but overall were generally highest in counties in the southern Central Valley, California's primary agricultural region. Flood and precipitation related crop insurance claims indicated that rice had the highest mean indemnity payout for any month with damages typically occurring in March and April. Insurance claims were also high in deciduous fruit and nut crops, which had peak damages in February. A comparison between inundation results and insurance claims suggests that the inundation mapped by our process coincides with claim activity. These data elucidate water inundation patterns across the state that can serve to inform farmers, insurers, decision makers, resource managers, and flood mitigation professionals.

California

Surface-air mercury fluxes across Western North America: A synthesis of spatial trends and controlling variables

Mercury (Hg) emission and deposition can occur to and from soils, and are an important component of the global atmospheric Hg budget. This paper focuses on synthesizing existing surface-air Hg flux data collected throughout the Western North American region and is part of a series of geographically focused Hg synthesis projects. A database of existing Hg flux data collected using the dynamic flux chamber (DFC) approach from almost a thousand locations was created for the Western North America region. Statistical analysis was performed on the data to identify the important variables controlling Hg fluxes and to allow spatiotemporal scaling. The results indicated that most of the variability in soil-air Hg fluxes could be explained by variations in soil-Hg concentrations, solar radiation, and soil moisture. This analysis also identified that variations in DFC methodological approaches were detectable among the field studies, with the chamber material and sampling flushing flow rate influencing the magnitude of calculated emissions. The spatiotemporal scaling of soil-air Hg fluxes identified that the largest emissions occurred from irrigated agricultural landscapes in California. Vegetation was shown to have a large impact on surface-air Hg fluxes due to both a reduction in solar radiation reaching the soil as well as from direct uptake of Hg in foliage. Despite high soil Hg emissions from some forested and other heavily vegetated regions, the net ecosystem flux (soil flux + vegetation uptake) was low. Conversely, sparsely vegetated regions showed larger net ecosystem emissions, which were similar in magnitude to atmospheric Hg deposition (except for the Mediterranean California region where soil emissions were higher). The net ecosystem flux results highlight the important role of landscape characteristics in effecting the balance between Hg sequestration and (re-)emission to the atmosphere.

Science of the Total Environment

Western water and climate change

The western United States is a region long defined by water challenges. Climate change adds to those historical challenges, but does not, for the most part, introduce entirely new challenges; rather climate change is likely to stress water supplies and resources already in many cases stretched to, or beyond, natural limits. Projections are for continued and, likely, increased warming trends across the region, with a near certainty of continuing changes in seasonality of snowmelt and streamflows, and a strong potential for attendant increases in evaporative demands. Projections of future precipitation are less conclusive, although likely the northernmost West will see precipitation increases while the southernmost West sees declines. However, most of the region lies in a broad area where some climate models project precipitation increases while others project declines, so that only increases in precipitation uncertainties can be projected with any confidence. Changes in annual and seasonal hydrographs are likely to challenge water managers, users, and attempts to protect or restore environmental flows, even where annual volumes change little. Other impacts from climate change (e.g., floods and water-quality changes) are poorly understood and will likely be location dependent. In this context, four iconic river basins offer glimpses into specific challenges that climate change may bring to the West. The Colorado River is a system in which overuse and growing demands are projected to be even more challenging than climate-change-induced flow reductions. The Rio Grande offers the best example of how climate-change-induced flow declines might sink a major system into permanent drought. The Klamath is currently projected to face the more benign precipitation future, but fisheries and irrigation management may face dire straits due to warming air temperatures, rising irrigation demands, and warming waters in a basin already hobbled by tensions between endangered fisheries and agricultural demands. Finally, California's Bay-Delta system is a remarkably localized and severe weakness at the heart of the region's trillion-dollar economy. It is threatened by the full range of potential climate-change impacts expected across the West, along with major vulnerabilities to increased flooding and rising sea levels.

Ecological Applications

Dissolved organic carbon and disinfection by-product precursor release from managed peat soils

A wetland restoration demonstration project examined the effects of a permanently flooded wetland on subsidence of peat soils. The project, started in 1997, was done on Twitchell Island, in the Sacramento-San Joaquin Delta of California. Conversion of agricultural land to a wetland has changed many of the biogeochemical processes controlling dissolved organic carbon (DOC) release from the peat soils, relative to the previous land use. Dissolved organic C in delta waters is a concern because it reacts with chlorine, added as a disinfectant in municipal drinking waters, to form carcinogenic disinfection byproducts (DBPs), including trihalomethanes (THMs) and haloacetic acids (HAAs). This study explores the effects of peat soil biogeochemistry on DOC and DBP release under agricultural and wetland management. Results indicate that organic matter source, extent of soil organic matter decomposition, and decomposition pathways all are factors in THM formation. The results show that historical management practices dominate the release of DOC and THM precursors. However, within-site differences indicate that recent management decisions can contribute to changes in DOC quality and THM precursor formation. Not all aromatic forms of carbon are highly reactive and certain environmental conditions produce the specific carbon structures that form THMs. Both HAA and THM precursors are elevated in the DOC released under wetland conditions. The findings of this study emphasize the need to further investigate the roles of organic matter sources, microbial decomposition pathways, and decomposition status of soil organic matter in the release of DOC and DBP precursors from delta soils under varying land-use practices.

California

Cuyama Valley, California hydrologic study: An assessment of water availability

Water resources are under pressure throughout California, particularly in agriculturally dominated valleys. Since 1949, the Cuyama Valley’s irrigated acreage has increased from 13 to 35 percent of the valley. Increased agriculture has contributed to the demand for water beyond natural recharge. The tools and information developed for this study can be used to help understand the Cuyama Valley aquifer system, an important resource of Santa Barbara County.

California

A summary of ground-water pumpage in the Central Valley, California, 1961-77

In the Central Valley of California, a great agricultural economy has been developed in a semiarid environment. This economy is supported by imported surface water and 9 to 15 million acre-feet per year of ground water. Estimates of ground-water pumpage computed from power consumption have been compiled and summarized. Under ideal conditions, the accuracy of the methods used is about 3 percent. This level of accuracy is not sustained over the entire study area. When pumpage for the entire area is mapped, the estimates seem to be consistent areally and through time. A multiple linear-regression model was used to synthesize data for the years 1961 through 1977, when power data were not available. The model used a relation between ground-water pumpage and climatic indexes to develop a full suite of pumpage data to be used as input to a digital ground-water model, one of the products of the Central Valley Aquifer Project. Statistical analysis of well-perforation data from drillers ' logs and water-temperature data was used to determine the percentage of pumpage that was withdrawn from each of two horizontal layers. (USGS)

Water-Resources Investigations Report

Numerical simulation of ground-water flow in the central part of the western San Joaquin Valley, California

The occurrence of selenium in agricultural drain water in the central part of the western San Joaquin Valley, California, has focused concern on strategies for managing shallow, saline ground water. To assess alternatives to agricultural drains, a three-dimensional, finite-difference numerical model of the regional groundwater flow system was developed. This report documents the mathematical approach used to model the flow system, the data base on which the model is based, and the methods used to calibrate the model. The 550-square-mile study area includes parts of the Panoche Creek alluvial fan and parts of the Little Panoche Creek and Cantua Creek alluvial fans. The model simulates transient flow in the semiconfined and confined zones above and below the Corcoran Clay Member of the Tulare Formation of Pleistocene age. The model incorporates areally distributed ground-water recharge, areally and vertically distributed pumping, regional-collector drains in the Wesdands Water District (operative from 1980 to 1985), on-farm drains in parts of the Panoche, Broadview, and Firebaugh Water Districts, and bare-soil evaporation (which occurs if the water table is within 7 feet of land surface). The model also incorporates texture-based estimates of hydraulic conductivity, where texture is defined as the fraction of coarse-grained deposits present in a given subsurface interval. The numerical model was developed using hydrologic data from 1972 to 1988. Most of the parameters incorporated into the model were evaluated independently of the model, including system geometry, the distribution of texture, the altitudes of the water table and potentiometric surface of the confined zone in 1972 (initial condition), the hydraulic conductivity of coarse-grained deposits derived from the Coast Ranges, the hydraulic conductivity of coarse-grained deposits derived from the Sierra Nevada, specific storage, recharge, pumping, and parameters needed to incorporate drains and bare-soil evaporation. Four parameters were calibration variables: the hydraulic conductivity of fine-grained deposits in the semiconfined zone, the hydraulic conductivity of the Corcoran Clay Member, specific yield, and the transmissivity of the confined zone. The model was calibrated in two phases. In the first phase, a steady-state model of the ground-water flow system in 1984 was used to constrain the relation between the hydraulic conductivity of fine-grained deposits in the semiconfined zone and the hydraulic conductivity of the Corcoran Clay Member, thus reducing the number of independent variables from four to three. In the second phase of calibration, the change in altitude of the water table from 1972 to 1984, the change in altitude of the potentiometric surface of the confined zone from 1972 to 1984, and the number of model cells subject to bare-soil evaporation from 1972 to 1988 were used to evaluate the remaining three variables. The calibrated model reproduces the average change in water-table altitude (1972-84) to within 0.4 foot (average measured change 11.5 feet) and the average change in confined zone head (1972- 84) to within 19 feet (average measured change 120 feet). The simulated time-series record of the total number of model cells subject to bare-soil evaporation (each cell is 1 mile square) is within the range of the measured data. The measured values are at a minimum in October and a maximum in July. The October values ranged from 103 in 1972 to 132 in 1984 (the drains were closed in 1985) to 151 in 1988. The July values ranged from 144 in 1973 to 198 in 1984, to 204 in 1988. The simulated values ranged from 103 in 1972 to 161 in 1984, to 208 in 1988.

Water Supply Paper

Dissolved organic carbon concentrations and compositions, and trihalomethane formation potentials in waters from agricultural peat soils, Sacramento-San Joaquin Delta, California; implications for drinking-water quality

Water exported from the Sacramento-San Joaquin River delta (Delta) is an important drinking-water source for more than 20 million people in California. At times, this water contains elevated concentrations of dissolved organic carbon and bromide, and exceeds the U.S. Environmental Protection Agency's maximum contaminant level for trihalomethanes of 0.100 milligrams per liter if chlorinated for drinking water. About 20 to 50 percent of the trihalomethane precursors to Delta waters originates from drainage water from peat soils on Delta islands. This report elucidates some of the factors and processes controlling and affecting the concentration and quality of dissolved organic carbon released from peat soils and relates the propensity of dissolved organic carbon to form trihalomethanes to its chemical composition. Soil water was sampled from near-surface, oxidized, well-decomposed peat soil (upper soil zone) and deeper, reduced, fibrous peat soil (lower soil zone) from one agricultural field in the west central Delta over 1 year. Concentrations of dissolved organic carbon in the upper soil zone were highly variable, with median concentrations ranging from 46.4 to 83.2 milligrams per liter. Concentrations of dissolved organic carbon in samples from the lower soil zone were much less variable and generally slightly higher than samples from the upper soil zone, with median concentrations ranging from 49.3 to 82.3 milligrams per liter. The dissolved organic carbon from the lower soil zone had significantly higher aromaticity (as measured by specific ultraviolet absorbance) and contained significantly greater amounts of aromatic humic substances (as measured by XAD resin fractionation and carbon-13 nuclear magnetic resonance analysis of XAD isolates) than the dissolved organic carbon from the upper soil zone. These results support the conclusion that more aromatic forms of dissolved organic carbon are produced under anaerobic conditions compared to aerobic conditions. Dissolved organic carbon concentration, trihalomethane formation potential, and ultraviolet absorbance were all highly correlated, showing that trihalomethane precursors increased with increasing dissolved organic carbon and ultraviolet absorbance for whole water samples. Contrary to the generally accepted conceptual model for trihalomethane formation that assumes that aromatic forms of carbon are primary precursors to trihalomethanes, results from this study indicate that dissolved organic carbon aromaticity appears unrelated to trihalomethane formation on a carbon-normalized basis. Thus, dissolved organic carbon aromaticity alone cannot fully explain or predict trihalomethane precursor content, and further investigation of aromatic and nonaromatic forms of carbon will be needed to better identify trihalomethane precursors.

California

Emergent insect production in post-harvest flooded agricultural fields used by waterbirds

California’s Tulare Lake Basin (TLB) is one of the most important waterbird areas in North America even though most wetlands there have been converted to cropland. To guide management programs promoting waterbird beneficial agriculture, which includes flooding fields between growing periods, we measured emergence rates of insects, an important waterbird food, in three crop types (tomato, wheat, alfalfa) in the TLB relative to water depth and days flooded during August–October, 2003 and 2004. We used corrected Akaike’s Information Criterion values to compare a set of models that accounted for our repeated measured data. The best model included crop type and crop type interacting with days flooded and depth flooded. Emergence rates (mg m −2 day −1 ) were greater in tomato than wheat or alfalfa fields, increased with days flooded in alfalfa and tomato but not wheat fields, and increased with water depth in alfalfa and wheat but not tomato fields. To investigate the relationship between the range of diel water temperatures and insect emergence rates, we reared Chironomus dilutus larvae in environmental chambers under high (15–32°C) and low fluctuation (20–26°C) temperature regimes that were associated with shallow and deep (respectively) sampling sites in our fields. Larval survival (4×) and biomass (2×) were greater in the low thermal fluctuation treatment suggesting that deeply flooded areas would support greater insect production.

Wetlands

Dicofol and DDT residues in lizard carcasses and bird eggs from Texas, Florida, and California

Dicofol is an organochlorine agricultural pesticide used to control mites. The principal commercial dicofol product is known as Kelthane TM. More than 70% of dicofol product (about 3 million Ib or 1.4 million kg) sold annually in the U.S. is applied in California, Arizona, Texas, and Florida. Florida citrus and California cotton receive more than half the total (Clark 1990). In laboratory studies, dicofol, which is structurally similar to DDT, had adverse impacts on reproduction in fish (deformed larvae, delayed hatching), birds (reduced eggshell thickness, reduced hatchability), and mammals (reduced insemination rate, reduced pregnancy rate, failure to produce young) (see Clark 1990 for review). Overall, the reproduction of birds seems less sensitive to dicofol than to DDE. However, in birds, dietary concentrations of dicofol between 1 and 10 µg/g (wet weight) fed to captive adult females caused such problems as eggshell thinning, reduced hatching success, or reduced fertility in American kestrels ( Falco sparverius ) (Fry et al. 1988, Clark et al. 1990) and eastern screech-owls ( Otus asio ) (Wiemeyer et al. 1989). In spite of these laboratory findings, there have been no intensive field investigations of possible reproductive effects of dicofol on wild birds. Such studies must wait until field residue data are sufficient to identify populations with high exposure. If dicofol accumulates in birds in the field and heavily exposed populations can be identified, then their reproduction can be studied. Residues have not been reported from reptiles. Analytical screening of wildlife tissue samples for organochlorine chemicals only rarely includes dicofol, and this may explain why the relative hazard of dicofol to wildlife populations is poorly known.

California, Florida, Texas

Electrical resistivity investigation of fluvial geomorphology to evaluate potential seepage conduits to agricultural lands along the San Joaquin River, Merced County, California, 2012–13

Increased flows in the San Joaquin River, part of the San Joaquin River Restoration Program, are designed to help restore fish populations. However, increased seepage losses could result from these higher restoration flows, which could exacerbate existing drainage problems in neighboring agricultural lands and potentially damage crops. Channel deposits of abandoned river meanders that are hydraulically connected to the river could act as seepage conduits, allowing rapid and widespread water-table rise during restoration flows. There is a need to identify the geometry and properties of these channel deposits to assess their role in potential increased seepage effects and to evaluate management alternatives for reducing seepage. Electrical and electromagnetic surface geophysical methods have provided a reliable proxy for lithology in studies of fluvial and hyporheic systems where a sufficient electrical contrast exists between deposits of differing grain size. In this study, direct-current (DC) resistivity was used to measure subsurface resistivity to identify channel deposits and to map their subsurface geometry. The efficacy of this method was assessed by using DC resistivity surveys collected along a reach of the San Joaquin River in Merced County, California, during the summers of 2012 and 2013, in conjunction with borings and associated measurements from a hydraulic profiling tool. Modeled DC resistivity data corresponded with data from cores, hand-auger samples, a hydraulic profiling tool, and aerial photographs, confirming that DC resistivity is effective for differentiating between silt and sand deposits in this setting. Modeled DC resistivity data provided detailed two-dimensional cross-sectional resistivity profiles to a depth of about 20 meters. The distribution of high-resistivity units in these profiles was used as a proxy for identifying areas of high hydraulic conductivity. These data were used subsequently to guide the location and depth of wells installed onsite for monitoring flow in the channel deposits. Estimates of the cross-sectional area of channel deposits from DC resistivity pseudosections can provide critical input for groundwater-flow models designed to simulate river seepage and evaluate seepage-management alternatives.

California

Effects of groundwater pumping on agricultural drains in the Tule Lake subbasin, Oregon and California

Since 2001, irrigators in the upper Klamath Basin have increasingly turned to groundwater to compensate for reductions in surface-water allocation caused by shifts from irrigation use to instream flows for Endangered Species Act listed fishes. The largest increase in groundwater pumping has been in and around the Bureau of Reclamation’s Klamath Irrigation Project, which includes the Tule Lake subbasin in the southern part of the upper Klamath Basin. Agricultural drains on the Klamath Project are an important source of water for downstream irrigators and for the Tule Lake and Lower Klamath Lake National Wildlife Refuges. U.S. Geological Survey regional groundwater-flow model simulations and records of irrigation-return flow pumped from the Tule Lake subbasin into the adjacent Lower Klamath Lake subbasin have indicated that water-level declines from pumping may be causing decreased flow of shallow groundwater to agricultural drains. To better define the effect of increased pumping on drain flow and on the water balance of the groundwater system, the annual water volume pumped from drains in three subareas of the Tule Lake subbasin was estimated and a fine-grid, local groundwater model of the Tule Lake subbasin was constructed. Results of the agricultural-drain flow analysis indicate that groundwater discharge to drains has decreased such that flows in 2012 were approximately 32,400 acre-ft less than the 1997–2000 average flow. This decrease was concentrated in the northern and southeastern parts of the subbasin, which corresponds with the areas of greatest groundwater pumping. Model simulation results of the Tule Lake subbasin groundwater model indicate that increased supplemental pumping is the dominant stress to the groundwater system in the subbasin. Simulated supplemental pumping and decreased recharge from irrigation between 2000 and 2010 totaled 323,573 acre-ft, 234,800 acre-ft (73 percent) of which was from supplemental pumping. The response of the groundwater system to this change in stress included about 180,500 acre-ft (56 percent) of decreased groundwater discharge to drains and a 126,000 acre-ft (39 percent) reduction in aquifer storage. The remaining 5 percent came from reduced groundwater flow to other model boundaries, including the Lost River, the Tule Lake sumps, and interbasin flow.

California, Oregon

Post-drought groundwater storage recovery in California’s Central Valley

Groundwater depletion is a major threat to agricultural and municipal water supply in California's Central Valley. Recent droughts during 2007–2009 and 2012–2016 exacerbated chronic groundwater depletion. However, it is unclear how much groundwater storage recovered from drought-related overdrafts during post-drought years, and how climatic conditions and water management affected recovery times. We estimated groundwater storage change in the Central Valley for April 2002 through September 2019 using four methods: GRACE satellite data, a water balance approach, a hydrologic simulation model, and monitoring wells. We also evaluated the sensitivity of drought recovery to different climate scenarios (recent climate ± droughts and future climate change scenarios: 20 GCMs and 2 RCPs) using water balance method and statistical sampling of historical climate data. Estimated Central Valley groundwater loss during the two droughts ranged from 19 km 3 (2007–2009) to 28 km 3 (2012–2016) (median of four methods). Median aquifer storage recovery was 34% and 19% of the overdraft during the 2010–2011 and 2017–2019 post-drought years, respectively. Numerical experiments show that recovery times are sensitive to climate forcing, with longer recovery times for a future climate scenario that replicate historical climatology relative to historical forcing with no droughts. Overdraft recovery times decrease by ∼2× with implementation of pumping restrictions (30th to 50th percentiles of historical groundwater depletion) to constrain groundwater depletion relative to no restrictions with a no-drought future climatology. This study highlights the importance of considering water management implications for future drought recoveries within the context of climate change scenarios.

California

Occurrence of nitrate and pesticides in ground water beneath three agricultural land-use settings in the eastern San Joaquin Valley, California, 1993-1995

The processes that affect nitrate and pesticide occurrence may be better understood by relating ground-water quality to natural and human factors in the context of distinct, regionally extensive, land- use settings. This study assesses nitrate and pesticide occurrence in ground water beneath three agricultural land-use settings in the eastern San Joaquin Valley, California. Water samples were collected from 60 domestic wells in vineyard, almond, and a crop grouping of corn, alfalfa, and vegetable land-use settings. Each well was sampled once during 1993?1995. This study is one element of the U.S. Geological Survey?s National Water-Quality Assessment Program, which is designed to assess the status of, and trends in, the quality of the nation?s ground- and surface-water resources and to link the status and trends with an understanding of the natural and human factors that affect the quality of water. The concentrations and occurrence of nitrate and pesticides in ground-water samples from domestic wells in the eastern alluvial fan physiographic region were related to differences in chemical applica- tions and to the physical and biogeochemical processes that charac- terize each of the three land-use settings. Ground water beneath the vineyard and almond land-use settings on the coarse-grained, upper and middle parts of the alluvial fans is more vulnerable to nonpoint- source agricultural contamination than is the ground water beneath the corn, alfalfa, and vegetable land-use setting on the lower part of the fans, near the basin physiographic region. Nitrate concentrations ranged from less than 0.05 to 55 milligrams per liter, as nitrogen. Nitrate concentrations were significantly higher in the almond land-use setting than in the vineyard land-use setting, whereas concentrations in the corn, alfalfa, and vegetable land-use setting were intermediate. Nitrate concentrations exceeded the maximum contaminant level in eight samples from the almond land- use setting (40 percent), in seven samples from the corn, alfalfa, and vegetable land-use setting (35 percent), and in three samples from the vineyard land-use setting (15 percent). The physical and chemical characteristics of the vineyard and the almond land-use settings are similar, characterized by coarse-grained sediments and high dissolved- oxygen concentrations, reflecting processes that promote rapid infiltration of water and solutes. The high nitrate concentrations in the almond land-use setting reflect the high amount of nitrogen appli- cations in this setting, whereas the low nitrate concentrations in the vineyard land-use setting reflect relatively low nitrogen applications. In the corn, alfalfa, and vegetable land-use setting, the relatively fine-grained sediments, and low dissolved-oxygen concentrations, reflect processes that result in slow infiltration rates and longer ground-water residence times. The intermediate nitrate concentrations in the corn, alfalfa, and vegetable land-use setting are a result of these physical and chemical characteristics, combined with generally high (but variable) nitrogen applications. Twenty-three different pesticides were detected in 41 of 60 ground- water samples (68 percent). Eighty percent of the ground-water samples from the vineyard land-use setting had at least one pesticide detection, followed by 70 percent in the almond land-use setting, and 55 percent in the corn, alfalfa, and vegetable land-use setting. All concentra- tions were less than state or federal maximum contaminant levels only 5 of the detected pesticides have established maximum contaminant levels) with the exception of 1,2-dibromo-3-chloropropane, which exceeded the maximum contaminant level of 0.2 micrograms per liter in 10 ground-water samples from vineyard land-use wells and in 5 ground- water samples from almond land-use wells. Simazine was detected most often, occurring in 50 percent of the ground-water samples from the vineyard land-use wells and in 30 percent

Water-Resources Investigations Report