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At least 73 records · Page 4Linked to original sources

The distribution of nuclear genetic variation and historical demography of sea otters

The amount and distribution of population genetic variation is crucial information for the design of effective conservation strategies for endangered species and can also be used to provide inference about demographic processes and patterns of migration. Here, we describe variation at a large number of nuclear genes in sea otters Enhydra lutris ssp. We surveyed 14 variable microsatellite loci and two genes of the major histocompatibility complex (MHC) in up to 350 California sea otters Enhydra lutris nereis , which represents ∼10% of the subspecies' population, and 46 otters from two Alaskan sites. We utilized methods for detecting past reductions in effective population size to examine the effects of near extinction from the fur trade. Summary statistic tests largely failed to find a signal of a recent population size reduction (within the past 200 years), but a Bayesian method found a signal of a strong reduction over a longer time scale (up to 500 years ago). These results indicate that the reduction in size began long enough ago that much genetic variation was lost before the 19th century fur trade. A comparison of geographic distance and pairwise relatedness for individual otters found no evidence of kin-based spatial clustering for either gender. This indicates that there is no population structure, due to extended family groups, within the California population. A survey of population genetic variation found that two of the MHC genes, DQB and DRB, had two alleles present and one of the genes, DRA, was monomorphic in otters. This contrasts with other mammals, where they are often the most variable coding genes known. Genetic variation in the sea otter is among the lowest observed for a mammal and raises concerns about the long-term viability of the species, particularly in the face of future environmental changes.

Animal Conservation

Optimal management decisions are robust to unknown dynamics in an amphibian metapopulation plagued by disease

Identifying conservation actions to recover threatened species can be challenging due to many ecological uncertainties. For example, major threats to a species' conservation are commonly known or suspected, but the specific impacts on population or metapopulation dynamics can be uncertain. This is frequently the case with emerging infectious diseases, including chytridiomycosis, a global driver of amphibian population declines caused by the fungal pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans . While these diseases are known to cause amphibian declines and extirpations, the mechanisms of their landscape-scale spread are still largely unknown. Such uncertainty can lead to inaction which may jeopardize timely recovery of a species. Decision analysis is a pragmatic approach to making transparent and defensible decisions while dealing with uncertainties. We investigated whether optimal actions aimed at recovering boreal toad ( Anaxyrus boreas boreas ) metapopulations in the southern Rocky Mountains are robust to the unknown dynamics of Bd spread using value of information and regret analyses. Value of information is a decision-analytic tool for calculating the value of new information in terms of performance on management objectives, while regret measures the cost of acting under incorrect information. We further conducted a stochastic sensitivity analysis to identify the relative effects of metapopulation parameters on system dynamics. We found optimal actions were robust to the unknown dynamics of Bd spread. While boreal toad breeding occurrence is highly sensitive to Bd distribution, the optimal decision is not. Resolving the unknown dynamics of Bd spread would lead to a minimal gain of less than one breeding toad subpopulation at the end of 50 years, given the currently available management actions. Applying a decision-analytic framework coupled with value of information and regret analyses can help frame how uncertainties affect decisions in a way that empowers decision makers.

Animal Conservation

Influence of space use on fitness and the reintroduction success of the Laysan teal

Translocation is an important tool for wildlife conservation and biodiversity restoration, but an inefficient one because of the unpredictability of success. Predictors of success such as habitat quality of the release site and number of individuals released have been identified, but the dynamics of successful translocations remain poorly understood. In particular, little is known about the relationship of individual post-release movements to population establishment. In 2004, Laysan teal Anas laysanensis were reintroduced by translocating 20 wild birds from Laysan Island to Midway Atoll. Twenty-two additional wild founders were brought the next year. We monitored the survival, reproductive success and movements of the 42 translocated individuals and their offspring for 4 years. Additionally, we monitored population size from 2004 to 2010. Unlike most translocations, we did not observe elevated post-release mortality despite flight-feather trimming to prevent immediate dispersal off-island: first year survival was > 90% and survival rates until 2009 were 0.65±0.08 for founding adults. Laysan teal flew between the two main islands of Midway Atoll, and offspring had significantly larger maximum movement distances than founders. We monitored 84 nests and observed a significant, negative relationship of home range size to productivity for founding females. Flightless founders did not show fidelity to their release sites, but had strong fidelity to annual home ranges after attaining flight. Although we observed a component Allee effect on mate-finding, this did not translate into a demographic Allee effect, and generally, the high fitness of founders contributed substantially to successful population establishment. Laysan teal abundance increased linearly until 2009, but showed evidence of population regulation afterwards. The population estimate was 473 (95% confidence interval 439–508) in 2010. On the much larger main Hawaiian Islands, we expect greater post-release movement, a stronger component Allee effect, lower survival and lower reproductive rates because of predation to preclude successful reintroductions of this species to sites without predator management.

Laysan Island;Midway Atoll

Carnivore re-colonisation: Reality, possibility and a non-equilibrium century for grizzly bears in the southern Yellowstone ecosystem

Most large native carnivores have experienced range contractions due to conflicts with humans, although neither rates of spatial collapse nor expansion have been well characterised. In North America, the grizzly bear (Ursus arctos) once ranged from Mexico northward to Alaska, however its range in the continental USA has been reduced by 95-98%. Under the U. S. Endangered Species Act, the Yellowstone grizzly bear population has re-colonised habitats outside Yellowstone National Park. We analysed historical and current records, including data on radio-collared bears, (1) to evaluate changes in grizzly bear distribution in the southern Greater Yellowstone Ecosystem (GYE) over a 100-year period, (2) to utilise historical rates of re-colonisation to project future expansion trends and (3) to evaluate the reality of future expansion based on human limitations and land use. Analysis of distribution in 20-year increments reflects range reduction from south to north (1900-1940) and expansion to the south (1940-2000). Expansion was exponential and the area occupied by grizzly bears doubled approximately every 20 years. A complementary analysis of bear occurrence in Grand Teton National Park also suggests an unprecedented period of rapid expansion during the last 20-30 years. The grizzly bear population currently has re-occupied about 50% of the southern GYE. Based on assumptions of continued protection and ecological stasis, our model suggests total occupancy in 25 years. Alternatively, extrapolation of linear expansion rates from the period prior to protection suggests total occupancy could take > 100 years. Analyses of historical trends can be useful as a restoration tool because they enable a framework and timeline to be constructed to pre-emptively address the social challenges affecting future carnivore recovery. ?? 2004 The Zoological Society of London.

Idaho, Montana, Wyoming

Rehabilitating sea otters: Feeling good versus being effective

This chapter examines the complexities of assessing the merits and drawbacks of wildlife rehabilitation. Wildlife rehabilitation is often costly, and the resulting benefits differ depending on whether one’s interest is in the welfare of individual animals or conserving populations. Two examples of this dilemma include the rehabilitation of oiled sea otters following the Exxon Valdez spill in Prince William Sound, Alaska, and the rehabilitation of stranded sea otter pups in central California. In the first example, substantial financial investment resulted in little or no benefits for population conservation. In the second example, the potential for population-level benefits is context dependent: in populations near carrying capacity the conservation impacts are negligible, whereas in isolated, low-density populations rehabilitation and release can be an effective conservation tool. Wildlife rehabilitation is valued by people for various reasons, but recognizing and acknowledging the difference between individual and population welfare is an important step toward effective wildlife conservation.

Book chapter

Ghost of habitat past: historic habitat affects the contemporary distribution of giant garter snakes in a modified landscape.

Historic habitat conditions can affect contemporary communities and populations, but most studies of historic habitat are based on the reduction in habitat extent or connectivity. Little is known about the effects of historic habitat on contemporary species distributions when historic habitat has been nearly completely removed, but species persist in a highly altered landscape. More than 93% of the historic wetlands in the Central Valley of California, USA, have been drained and converted to agricultural and other uses, but agricultural wetlands, such as rice and its supporting infrastructure of canals, allow some species to persist. Little is known about the distribution of giant garter snakes Thamnophis gigas , a rare aquatic snake species inhabiting this predominantly agricultural landscape, or the variables that affect where this species occurs. We used occupancy modeling to examine the distribution of giant garter snakes at the landscape scale in the Sacramento Valley (northern portion of the Central Valley) of California, with an emphasis on the relative strength of historic and contemporary variables (landscape-scale habitat, local microhabitat, vegetation composition and relative prey counts) for predicting giant garter snake occurrence. Proximity to historic marsh best explained variation in the probability of occurrence of giant garter snakes at the landscape scale, with greater probability of occurrence near historic marsh. We suspect that the importance of distance to historic marsh represents dispersal limitations of giant garter snakes. These results suggest that preserving and restoring areas near historic marsh, and minimizing activities that reduce the extent of marsh or marsh-like (e.g. rice agriculture, canal) habitats near historic marsh may be advantageous to giant garter snakes.

Animal Conservation

Effects of a flooding event on a threatened black bear population in Louisiana

The Louisiana black bear, Ursus americanus luteolus, is listed as threatened under the Endangered Species Act as a result of habitat loss and human-related mortality. Information on population-level responses of large mammals to flooding events is scarce, and we had a unique opportunity to evaluate the viability of the Upper Atchafalaya River Basin (UARB) black bear population before and after a significant flooding event. We began collecting black bear hair samples in 2007 for a DNA mark-recapture study to estimate abundance (N) and apparent survival (φ). In 2011, the Morganza Spillway was opened to divert floodwaters from the Mississippi River through the UARB, inundating > 50% of our study area, potentially impacting recovery of this important bear population. To evaluate the effects of this flooding event on bear population dynamics, we used a robust design multistate model to estimate changes in transition rates from the flooded area to non-flooded area (ψ F → NF ) before (2007–2010), during (2010–2011) and after (2011–2012) the flood. Average N across all years of study was 63.2 ( SE = 5.2), excluding the year of the flooding event. Estimates of ψ F → NF increased from 0.014 ( SE = 0.010; meaning that 1.4% of the bears moved from the flooded area to non-flooded areas) before flooding to 0.113 ( SE = 0.045) during the flood year, and then decreased to 0.028 ( SE = 0.035) after the flood. Although we demonstrated a flood effect on transition rates as hypothesized, the effect was small (88.7% of the bears remained in the flooded area during flooding) and φ was unchanged, suggesting that the 2011 flooding event had minimal impact on survival and site fidelity.

Louisiana

Post-release monitoring of Antillean manatees: an assessment of the Brazilian rehabilitation and release programme

Mammalian reintroduction programmes frequently aim to reconnect isolated sub-populations and restore population viability. However, these long-term objectives are rarely evaluated due to the inadequacy of post-release monitoring. Here, we report the results of a unique long term telemetry-based monitoring programme for rehabilitated Antillean manatees (Trichechus manatus manatus) reintroduced into selected sites in northeast Brazil with the aim of reconnecting isolated relict populations. Twenty-one satellite-tagged rehabilitated manatees, 13 males and 8 females, were released into the wild from two sites between November 2008 and June 2013. Individual accumulation curves were plotted and home ranges were calculated through the fixed kernel method using 95% of the utilization distribution. The number and size of the Centres of Activity (COAs) were calculated using 50% of the utilization distribution. Manatees displayed a dichotomous pattern of movement, with individuals either characterized by sedentary habits or by much more extensive movements. Moreover, home range size was not significantly influenced by gender, age at release or release site. COAs were strongly associated with sheltered conditions within reefs and estuaries, and also by the presence of freshwater and feeding sites. Our data confirm that manatee reintroductions in Brazil have the potential to reconnect distant sub-populations. However, pre-release identification of potential long-distance migrants is currently unfeasible, and further analysis would be required to confirm genetic mixing of distant sub-populations.

Animal Conservation

Avian community responses to post-fire forest structure: Implications for fire management in mixed conifer forests

Fire is a natural process and the dominant disturbance shaping plant and animal communities in many coniferous forests of the western US. Given that fire size and severity are predicted to increase in the future, it has become increasingly important to understand how wildlife responds to fire and post-fire management. The Angora Fire burned 1243 hectares of mixed conifer forest in South Lake Tahoe, California. We conducted avian point counts for the first 3 years following the fire in burned and unburned areas to investigate which habitat characteristics are most important for re-establishing or maintaining the native avian community in post-fire landscapes. We used a multi-species occurrence model to estimate how avian species are influenced by the density of live and dead trees and shrub cover. While accounting for variations in the detectability of species, our approach estimated the occurrence probabilities of all species detected including those that were rare or observed infrequently. Although all species encountered in this study were detected in burned areas, species-specific modeling results predicted that some species were strongly associated with specific post-fire conditions, such as a high density of dead trees, open-canopy conditions or high levels of shrub cover that occur at particular burn severities or at a particular time following fire. These results indicate that prescribed fire or managed wildfire which burns at low to moderate severity without at least some high-severity effects is both unlikely to result in the species assemblages that are unique to post-fire areas or to provide habitat for burn specialists. Additionally, the probability of occurrence for many species was associated with high levels of standing dead trees indicating that intensive post-fire harvest of these structures could negatively impact habitat of a considerable proportion of the avian community.

California

Origins of lead in populations of raptors

Although poisoning from anthropogenically derived lead threatens wildlife of many species, routes of lead exposure are unclear and rarely empirically tested. We used blood lead concentration and isotope ratio ( 207 Pb/ 206 Pb) data from populations of four species of raptors from across North America to test hypotheses associated with lead exposure via inhalation versus ingestion. Mean variation in blood lead concentration among cohort siblings was non‐zero at nests of ferruginous hawks Buteo regalis and osprey Pandion haliaetus ( P < 0.001 and P < 0.001), indicating exposure via episodic ingestion. However, within‐nest variation in blood lead concentration was not significantly different from zero among cohort siblings at nests of bald eagles Haliaeetus leucocephalus and golden eagles Aquila chrysaetos ( P = 0.014 and P = 0.023), consistent with exposure via continuous inhalation. Isotope ratio data corroborated the lead concentration data and within‐nest average and variance of blood lead concentrations were positively correlated ( r = 0.70 to 0.94), indicating episodic ingestion. This study provides some of the first empirical population‐level data to evaluate mechanisms of lead exposure and demonstrates the importance of lead ingestion to avian predators and scavengers.

Alaska, Arizona, California, Idaho, Michigan, Mont

Immigration does not offset harvest mortality in groups of a cooperatively breeding carnivore

The effects of harvest on cooperatively breeding species are often more complex than simply subtracting the number of animals that died from the group count. Changes in demographic rates, particularly dispersal, could offset some effects of harvest mortality in groups but this is rarely explored with cooperative breeders. We asked whether a cooperatively breeding species known for long-distance dispersal could compensate for the effect of harvest mortality on density by adopting immigrants into the group. We used genetic samples to estimate the minimum density of gray wolves ( Canis lupus ) and proportion of immigrants in groups in the northern US Rocky Mountains after an annual harvest regime was initiated and in the Canadian Rocky Mountains where wolves were managed consistently under an annual harvest regime. We tested whether immigration (1) compensated, (2) partially compensated or (3) did not compensate numerically for harvest mortality in groups and hypothesized immigration would increase with increasing harvest intensity. Density of wolves in groups declined after harvest was initiated whereas immigration into groups was consistently low and did not change with harvest in the US study area. Immigration into groups was similarly low and density even lower in the Canadian study area compared to the US study area. Our results indicate immigration did not compensate for harvest mortality in groups in two separate populations of a cooperatively breeding carnivore. We hypothesize the social structure of wolf groups may limit the potentially compensatory response of immigration in some populations.

Animal Conservation

The effect of group size on reproduction in cooperatively breeding gray wolves depends on density

In cooperatively breeding species, large group size is often positively related to reproductive success and group persistence. We have a poor understanding, however, of how group sizes within a population affect reproduction particularly as density varies. We hypothesized that at low densities, wolves in both small and large groups would have similar reproductive rates. At high densities, however, wolves in small groups would have lower reproductive rates compared to those in large groups. Using empirical data from radio-collared wolves in Idaho and Yellowstone National Park, WY, USA (1996–2012), we compared reproductive rates (i.e. proportion reproducing, litter size, pup survival) among small and large groups of wolves as density fluctuated within the populations. Reproductive rates were generally lower for individuals in small groups compared to those in large groups, particularly as density increased. Pup survival, however, was slightly higher for wolves in small groups compared to large groups except at very high densities. Polygamy increased with density regardless of group size, suggesting a polygamy threshold for wolves. Large group size resulted in less parturition failure, more breeding females per group, larger litter sizes, and ultimately more pups recruited per group. Large group size appears advantageous for several, but not all, aspects of reproduction particularly when population density is high.

Animal Conservation

Unexpected effect of geographic origin on post-translocation survival in a long-lived reptile, the gopher tortoise

Mitigation translocations move wildlife from specific areas due to conflict with humans over land use at the site. A critical decision when carrying out mitigation translocation is the acceptable distance across which animals can be moved. This decision trades off logistical expediency of unrestricted translocation with the risk of reducing translocation success due to environmental mismatch between origin and translocation site conditions. In this study, we used a large dataset of 502 individually identifiable carcasses to examine the role of geographic origin and translocation distance in the relative survival of 2822 translocated subadult and adult gopher tortoises ( Gopherus polyphemus ), a species experiencing large-scale mitigation translocation, at a recipient site in the Florida panhandle, USA. We hypothesized that if climate or habitat differences between the origin and translocation site influenced survival, tortoises translocated from within the Florida panhandle would have the highest survival. To the contrary, we found that survival slightly increased with increasing climatic difference between origin and recipient site, driven by higher survival of tortoises coming from central Florida sites compared to those from the panhandle and north Florida. This suggests that environmental mismatch due to long-distance translocation is not a main driver of mortality. These models also indicated an effect of season, with a survival advantage to tortoises translocated in the spring and late fall, relative to summer translocations, and a negative effect of initial density on survival. Finally, we also estimated the upper bound on annual survival in three well-monitored groups to be quite low (92–95%) for several years following release, suggesting caution when considering large translocated populations to be viable without first assessing adult survival. Our unexpected results highlight the importance of investigating species-specific sensitivities to translocation distances and indicate the limitations of assumed linear effects of translocation distance on outcomes.

Florida

Delayed positive responses of snowshoe hares to prescribed burning in a fire-adapted ecosystem

Wildlife populations near the periphery of a species’ range are vulnerable to changes in habitat conditions and climate. However, habitat management and maintenance can help with the persistence of these susceptible populations. Snowshoe hare ( Lepus americanus ) populations near the southern extent of their range are at risk of extirpation because of changing winter conditions, coupled with reduced early-successional habitat. Prescribed fire has been used to restore and maintain early-successional habitat in the southern range of snowshoe hares, but previous research suggests that burned areas might initially be unsuitable for hares. Therefore, more information is needed on the time required for hares to start using an area post-burning, and the long-term effects of prescribed fire on hare survival. We studied snowshoe hare habitat use and survival in northeastern Pennsylvania, where prescribed fire has been used for scrub oak barrens restoration. We used GPS locations from 71 hares and used resource selection functions to analyze hare selection for burned habitats of varying ages (0–12 years post-burn) and known-fate survival models to evaluate the effects of burning on survival. Hares started using burned areas ≥7 years post-burning but avoided areas burned 0–6 years prior. In addition, hare survival was positively associated with the amount of old burn habitat (≥7 years post-burn) used by an individual. Our results indicate that prescribed burning can be beneficial for hares, but that a time lag of ≥7 years is necessary for positive responses to occur. Planning burns within a mosaic of unburned areas could allow hares to persist during the 0–6 years post-burn when areas are not suitable for hares, which in turn could benefit the persistence of southern snowshoe hare populations. Collectively, our results highlight the importance of long-term demographic monitoring to understand wildlife population responses to management actions.

Pennsylvania

Unobserved individual and population level impacts of fishing gear entanglements on North Atlantic right whales

Fishing gear entanglements can compromise health and lower survival and reproductive output of wildlife, which can slow population growth or cause population declines. However, entanglements may go unobserved, making it difficult to quantify their effects on individuals' vital rates and a population's trajectory. Fishing gear entanglements are a leading cause of death for North Atlantic right whales, Eubalaena glacialis , an endangered species whose population has declined substantially over the last decade. Key sources of observation error have not been addressed when quantifying the effects of entanglement on this species. We formulated a hidden Markov model that integrated 28 years of photo identification records, visual health assessments, entanglement assessments, and hormone assays to estimate body condition dynamics, and entanglement, survival, and reproductive rates of female North Atlantic right whales. The model also accounted for observation errors, including entanglements and reproductive events that were unobserved. Whales entangled in fishing gear were drastically more likely to experience declines in body condition and had lower survival rates than whales that were not entangled. Additionally, only whales in good body condition became pregnant. Between 1994 and 2021 entanglements reduced the expected number of calves born by 12.9% (95% credible interval: 8.2%–19.6%) and the expected number of females alive at the end of 2021 by 18.5% (95% credible interval: 8.6%–29.4%). Fishing gear entanglements have reduced the North Atlantic right whale population's capacity to recover and have increased the importance of the health and survival of the remaining living whales. Therefore, reducing the risk of fishing gear entanglements is likely necessary for the population to recover.

Animal Conservation

Breeder turnover, harvest, and food affect recruitment of young nonbreeders in groups of gray wolves

Groups of cooperative breeders typically have social hierarchies, with breeders at the top guiding group decisions and influencing the behavior of subordinates in the group. Because of breeders' strong influence on group dynamics and behaviors, breeder turnover can affect the survival of remaining group members. We lack a solid understanding of the nuanced but important effects of breeder turnover on group composition. I first asked how harvest (i.e., hunting and trapping) affected rates of breeder turnover in groups of gray wolves ( Canis lupus ) in Idaho, USA, from 2008 to 2020. Then, I asked how breeder turnover, group size, and food availability affected the recruitment of 1- and 2-year-old nonbreeders into groups. Harvest was associated with an increase in breeding female, but not breeding male, turnover. Breeding female turnover was negatively associated with the probability of 1-year-old, but not 2-year-old, nonbreeders being in a group the following year. The only significant variable associated with the recruitment of 2-year-old nonbreeders into groups was sex, as males were less likely than females to be present in groups at time (t+1) . Finally, an index of prey biomass was positively associated with the probability of 1-year-olds being present in groups at time (t+1) (i.e., apparent pup survival to age 1). I show that harvest, social factors such as breeder turnover, and food availability influence the presence of young nonbreeders in groups, ultimately affecting group composition in a cooperative breeder.

Idaho

Effects of southern flying squirrels Glaucomys volans on red-cockaded woodpecker Picoides borealis reproductive success

Anecdotal data gathered from many populations suggest that southern flying squirrel (SFS, Glaucomys volans ) use of the endangered red-cockaded woodpecker's (RCW, Picoides borealis ) nest and roost cavities may negatively affect RCW populations. We conducted a controlled experiment to determine the effects of SFSs on RCW reproductive success. During the 1994 and 1995 breeding seasons, SFSs were removed from 30 RCW clusters and 32 clusters served as controls. SFSs were the most frequently encountered occupants of RCW cavities and used 20–33% of RCW cavities in control and treatment clusters over both years. Treatment groups produced significantly more successful nests (≥ 1 fledgling) than control groups in 1994. In 1995 however, there was no difference in the number of successful nests. In both years, RCW groups nesting in treatment clusters produced significantly more fledglings than groups in control clusters in each of four experimental areas, averaging approximately 0.7 additional fledglings per nesting group. Loss of entire clutches or broods, possibly as a result of predation or abandonment, was a major factor limiting reproduction in control groups in 1994. In contrast, differences in partial brood loss appeared to be the cause of differential fledging success in 1995. Usurpation of RCW roost cavities by SFSs may have placed greater energetic demands on RCWs for cavity defence or thermoregulation, thus reducing energy available for reproduction. Our results show that SFS use of RCW cavities during the breeding season has a significant impact on RCWs and that management of RCW populations should include activities that either minimize SFS populations in RCW clusters or limit access of SFSs to RCW cavities.

Animal Conservation

Relative vulnerability of female turtles to road mortality

Recent studies suggest that freshwater turtle populations are becoming increasingly male-biased. A hypothesized cause is a greater vulnerability of female turtles to road mortality. We evaluated this hypothesis by comparing sex ratios from published and unpublished population surveys of turtles conducted on- versus off-roads. Among 38 166 turtles from 157 studies reporting sex ratios, we found a consistently larger female fraction in samples from on-roads (61%) than off-roads (41%). We conclude that female turtles are indeed more likely to cross roadways than are males, which may explain recently reported skewed sex ratios near roadways and signify eventual population declines as females are differentially eliminated. ?? 2006 The Zoological Society of London.

Animal Conservation