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At least 73 records · Page 4Linked to original sources

In-vitro replication of Chelonid herpesvirus 5 in organotypic skin cultures from Hawaiian green turtles (Chelonia mydas)

Fibropapillomatosis (FP) is a tumor disease of marine turtles associated with Chelonid herpesvirus 5 (ChHV5) that has historically been refractory to growth in tissue culture. Here, we show for the first time de novo formation of ChHV5-positive intranuclear inclusions in cultured green turtle cells, which is indicative for active lytic replication of the virus. The minimal requirements to achieve lytic replication in cultured cells included 1) either in-vitro culturing of ChHV5-positive tumor biopsies (plugs) or organotypic cultures (rafts) consisting of ChHV5-positive turtle fibroblasts in collagen rafts seeded with turtle keratinocytes and 2) keratinocyte maturation induced by raising raft or biopsy cultures to the air-liquid interface. Virus growth was confirmed by detailed electron microscopic studies revealing intranuclear sun-shaped capsid factories, tubules, various stages of capsid formation, nuclear export by budding into the perinuclear space, tegumentation, and envelopment to complete de novo virus production. Membrane synthesis was also observed as a sign for active viral replication. Interestingly, cytoplasmic particles became associated with keratin filaments, a feature not seen in conventional monolayer cell cultures where most studies of herpesvirus replication have been performed. Our findings draw a rich and realistic picture of ChHV5 replication in cells derived from its natural host and may be crucial not only to better understand ChHV5 circulation but also to eventually complete Koch's postulates for FP. Moreover, the principles described here may serve as model to culture other viruses that are resistant to replication in conventional cell culture.

Hawai'i

Apollo 11 voice transcript pertaining to the geology of the landing site

On July 20, 1969, America's Eagle touched down in southwestern Mare Tranquillitatis beginning man's firsthand exploration of the moon. This document is an edited record of the conversations between astronauts Neil Armstrong and Edwin "Buzz" Aldrin, Jr., at Tranquility Base, and Bruce McCandless at Mission Control in Houston during the approximately 22 hours spent on the lunar surface. It includes additional commentary during their return to Earth. It is a condensation hopefully of all the verbal data having geological significance. All discussions and observations documenting the lunar landscape, its geologic characteristics, the rocks and soils collected, and the photographic record are retained along with supplementary remarks essential to the continuity of events during the mission. We have deleted the words of mechanical housekeeping and engineering data, attempting not to lose the personal and philosophical aspects of this intensely human experience. The sources of this verbal transcript are the complete audio tapes recorded during the mission and the Technical Air-to-Ground Voice Transcription published by NASA. The voice record is listed chronologically given in days, hours, minutes, and seconds. These are the Ground Elapsed Times (GET) after launch from Kennedy Space Center which was 9:32 a.m. EDT on July 16, 1969. Figure 1 shows the vicinity of the landing site that was described, sampled, and photographed by the Apollo 11 crewmen.

Final Report

Migration, foraging, and residency patterns for Northern Gulf loggerheads: implications of local threats and international movements

Northern Gulf of Mexico (NGoM) loggerheads ( Caretta caretta ) make up one of the smallest subpopulations of this threatened species and have declining nest numbers. We used satellite telemetry and a switching state-space model to identify distinct foraging areas used by 59 NGoM loggerheads tagged during 2010–2013. We tagged turtles after nesting at three sites, 1 in Alabama (Gulf Shores; n = 37) and 2 in Florida (St. Joseph Peninsula; n = 20 and Eglin Air Force Base; n = 2). Peak migration time was 22 July to 9 August during which >40% of turtles were in migration mode; the mean post-nesting migration period was 23.0 d (±13.8 d SD). After displacement from nesting beaches, 44 turtles traveled to foraging sites where they remained resident throughout tracking durations. Selected foraging locations were variable distances from tagging sites, and in 5 geographic regions; no turtles selected foraging sites outside the Gulf of Mexico (GoM). Foraging sites delineated using 50% kernel density estimation were located a mean distance of 47.6 km from land and in water with mean depth of −32.5 m; other foraging sites, delineated using minimum convex polygons, were located a mean distance of 43.0 km from land and in water with a mean depth of −24.9 m. Foraging sites overlapped with known trawling activities, oil and gas extraction activities, and the footprint of surface oiling during the 2010 Deepwater Horizon oil spill (n = 10). Our results highlight the year-round use of habitats in the GoM by loggerheads that nest in the NGoM. Our findings indicate that protection of females in this subpopulation requires both international collaborations and management of threats that spatially overlap with distinct foraging habitats.

Gulf of Mexico

General circulation model simulations of winter and summer sea-level pressures over North America

Temporal variability of synoptic-scale circulation is a dominant factor in regional temporal climate variations. In the midlatitudes, temporal variability of synoptic-scale circulation has been found to be related to temporal variations in regional air temperature and precipitation. General circulation model (GCM) simulations of long-term changes in synoptic-scale circulation may be useful in assessing the effects of climate change on regional air temperature and precipitation. Atmospheric pressure is an important component of synoptic-scale circulation. In this paper, observed sea-level pressures were used to evaluate winter and summer sea-level pressures over North America simulated by the Goddard Institute for Space Studies (GISS) and the Geophysical Fluid Dynamics Laboratory (GFDL) general circulation models. The objective of the study is to determine how similar the spatial and temporal distributions of GCM-simulated daily sea-level pressures over North America are to observed distributions. Overall, both models are better at reproducing observed within-season variance of winter and summer sea-level pressures than they are at simulating the magnitude of mean winter and summer sea-level pressures. Results indicate that winter sea-level pressures are better simulated by the GISS model than by the GFDL model. The GFDL model simulates anomalously high winter sea-level pressures over north-eastern North America. In summer, the GISS model underestimates sea-level pressures, whereas the GFDL model overestimates sea-level pressures over most of North America. Kolmogorov-Smirnov tests indicate that much of the error in model simulations can be attributed to differences between simulated and observed means. Comparisons of spatial correlation matrices of observed and simulated sea-level pressures indicate that GCMs simulate spatial variability of sea-level pressures that is similar to observed. These results suggest that GCMs are able to simulate major components of synoptic-scale circulation over North America, especially for winter.

International Journal of Climatology

Application of an updated atmospheric model to explore volcano infrasound propagation and detection in Alaska

Winds and temperature gradients greatly affect the long-range propagation of infrasound . The spatio-temporal variability of these parameters must therefore be accurately characterized to correctly interpret recorded infrasound at long distances, specifically to differentiate between source and propagation effects. Here we present the first results of an open source reanalysis model, termed Alaska Volcano Observatory Ground-to-Space (AVO-G2S), constructed to accurately characterize the atmosphere and model long-range infrasound propagation from volcanic eruptions in Alaska. We select a number of case studies to examine recent eruptions of Alaskan volcanoes whose ash emissions posed a threat to air traffic, including the two most recent eruptions of Pavlof Volcano and two typical explosions from Cleveland Volcano. Strong tropospheric ducting and low noise at the station during the 21 July 2015 explosion of Cleveland Volcano led to an automated detection of the explosion at an infrasound array 992 km away, whereas low signal-to-noise ratio for the 6 November 2014 Cleveland Volcano explosion helps explain the non-detection in real-time of a predicted strong stratospheric arrival. For the November 2014 Pavlof eruption, discrepancies between local seismic data and a distal infrasound array 460 km away cannot be solely explained by changes in atmospheric conditions, though some features of the complex propagation predictions follow the trends in long-range infrasound signals. The most recent eruption of Pavlof Volcano in March 2016 shows minimal changes in propagation conditions throughout the eruption and therefore indicates that the signals detected at long-range primarily reflect source processes. These results show how detailed examination of the acoustic propagation conditions provides insight into detection capability and eruption dynamics. Future work will implement AVO-G2S and high-resolution long-range infrasound propagation modeling in real-time for Alaskan volcanoes of interest.

Alaska

Report for explosion and earthquake data acquired in the 1999 Seismic Hazards Investigation of Puget Sound (SHIPS), Washington

This report describes the acquisition, processing, and quality of seismic reflection and refraction data obtained in the Seattle basin, central Puget Lowland, western Washington, in September 1999 during the Seismic Hazards Investigation of Puget Sound (SHIPS). As a sequel to the 1998 SHIPS air gun experiment (also known as 'Wet SHIPS'), the 1999 experiment, nicknamed 'Dry SHIPS,' acquired a 112-km-long east-west trending multichannel seismic reflection and refraction line in the Seattle basin. One thousand and eight seismographs were deployed at a nominal spacing of 100 meters, and 29 shot points were detonated at approximately 4 km intervals along the seismic line. The wide-angle seismic profile was designed to (1) determine the E-W geometry of Seattle basin, (2) measure the seismic velocities within the basin, and (3) define the basement structure underlying the Seattle basin. In this report, we describe the acquisition of these data, discuss the processing and merging of the data into common shot gathers, and illustrate the acquired profiles. We also describe the format and content of the archival tapes containing the SEGY-formatted, common-shot gathers. Data quality is variable, but useful data were acquired from all 29 shot points fired along the Dry SHIPS seismic line. The data show pronounced travel time delays associated with the low velocity sedimentary rocks filling the Seattle basin. Thirty-five REFTEK stations, deployed at 4 km intervals along the Dry SHIPS line, recorded 26 regional earthquakes and blasts and 17 teleseismic events, including the main shock and several aftershocks of the Mw=7.6 Chi-Chi (Taiwan) earthquake of 9/20/1999. The teleseismic recordings of the Chi-Chi (Taiwan) mainshock provide useful signals down to 10 second periods. They document a significant (factor between 5 and 10) focusing of compressional- and shear-wave energy by the Seattle basin at periods between 1 and 2 seconds relative to 'bedrock' sites east and west of the basin. Signal durations in the Seattle basin were also substantially increased relative to 'bedrock' sites in the Olympic peninsula and Cascade foothills.

Open-File Report

Climate change scenarios for air and water temperatures in the upper San Francisco Estuary: Implications for thermal regimes and Delta Smelt

Climate projections and their effects in the San Francisco Estuary have been evaluated as part of the US Geological Survey’s CASCaDE2 project. Understanding the ecological effects of climate change can help manage and maintain the ecological health and productivity of the San Francisco Estuary. In this study, we assessed downscaled air temperature data from 10 global climate models (GCMs) under two representative concentration pathway (RCP) trajectories for greenhouse gas concentrations for three regions of the San Francisco Estuary: Sacramento–San Joaquin Delta, Suisun and Grizzly bays, and Suisun Marsh. We also used previously derived regression models to estimate future water temperatures at 16 locations in the upper San Francisco Estuary. We used a thermal regime approach to summarize water temperature projections to investigate changes to the thermal regime of the upper San Francisco Estuary, and used the Delta Smelt (Hypomesus transpacificus) to demonstrate the effects that a warming climate may have on the habitat needs of this fish species. Our results suggested there were no major differences in the extent of air-temperature warming among the three regions. Annual average air temperatures were projected to increase approximately 2.0 °C and 4.7 °C by the end of the century for the low and high RCP scenarios, respectively. We found timing, frequency, and magnitude metrics varied by period and RCP scenario, while duration and variability metrics varied by space for water-temperature thermal regimes. For example, the spawning window for Delta Smelt (thermal-regime duration metric) is projected to expand in the future, with spawning starting earlier for both RCP scenarios for most sites. Although our thermal-regime analysis focused on the life history of Delta Smelt, similar approaches could be used to assess climate-change threats to a wide array of native and invasive terrestrial and aquatic species found in San Francisco Estuary.

California

A passive microwave snow depth algorithm with a proxy for snow metamorphism

Passive microwave brightness temperatures of snowpacks depend not only on the snow depth, but also on the internal snowpack properties, particularly the grain size, which changes through the winter. Algorithms that assume a constant grain size can yield erroneous estimates of snow depth or water equivalent. For snowpacks that are subject to temperatures well below freezing, the bulk temperature gradient through the snowpack controls the metamorphosis of the snow grains. This study used National Weather Service (NWS) station measurements of snow depth and air temperature from the Northern US Great Plains to determine temporal and spatial variability of the snow depth and bulk snowpack temperature gradient. This region is well suited for this study because it consists primarily of open farmland or prairie, has little relief, is subject to very cold temperatures, and has more than 280 reporting stations. A geostatistical technique called Kriging was used to grid the randomly spaced snow depth measurements. The resulting snow depth maps were then compared with the passive microwave observations from the Special Sensor Microwave Imager (SSM/I). Two snow seasons were examined: 1988-89, a typical snow year, and 1996-97, a record year for snow that was responsible for extensive flooding in the Red River Basin. Inspection of the time series of snow depth and microwave spectral gradient (the difference between the 19 and 37 GHz bands) showed that while the snowpack was constant, the spectral gradient continued to increase. However, there was a strong correlation (0.6 < R2 < 0.9) between the spectral gradient and the cumulative bulk temperature gradient through the snowpack (TGI). Hence, TGI is an index of grain size metamorphism that has occurred within the snowpack. TGI time series from 21 representative sites across the region and the corresponding SSM/I observations were used to develop an algorithm for snow depth that requires daily air temperatures. Copyright ?? 2002 John Wiley & Sons, Ltd.

Hydrological Processes

Methane in groundwater from a leaking gas well, Piceance Basin, Colorado, USA

Site-specific and regional analysis of time-series hydrologic and geochemical data collected from 15 monitoring wells in the Piceance Basin indicated that a leaking gas well contaminated shallow groundwater with thermogenic methane. The gas well was drilled in 1956 and plugged and abandoned in 1990. Chemical and isotopic data showed the thermogenic methane was not from mixing of gas-rich formation water with shallow groundwater or natural migration of a free-gas phase. Water-level and methane-isotopic data, and video logs from a deep monitoring well, indicated that a shale confining layer ~125 m below the zone of contamination was an effective barrier to upward migration of water and gas. The gas well, located 27 m from the contaminated monitoring well, had ~1000 m of uncemented annular space behind production casing that was the likely pathway through which deep gas migrated into the shallow aquifer. Measurements of soil gas near the gas well showed no evidence of methane emissions from the soil to the atmosphere even though methane concentrations in shallow groundwater (16 to 20 mg/L) were above air-saturation levels. Methane degassing from the water table was likely oxidized in the relatively thick unsaturated zone (~18 m), thus rendering the leak undetectable at land surface. Drilling and plugging records for oil and gas wells in Colorado and proxies for depth to groundwater indicated thousands of oil and gas wells were drilled and plugged in the same timeframe as the implicated gas well, and the majority of those wells were in areas with relatively large depths to groundwater. This study represents one of the few detailed subsurface investigations of methane leakage from a plugged and abandoned gas well. As such, it could provide a useful template for prioritizing and assessing potentially leaking wells, particularly in cases where the leakage does not manifest itself at land surface.

Colorado

Reducing loss of life and property from disasters: A societal benefit area of the strategic plan for U.S. Integrated Earth Observation System (IEOS)

Natural and technological disasters, such as hurricanes and other extreme weather events, earthquakes, volcanic eruptions, landslides and debris flows, wildland and urban-interface fires, floods, oil spills, and space-weather storms, impose a significant burden on society. Throughout the United States, disasters inflict many injuries and deaths, and cost the nation $20 billion each year (SDR, 2003). Disasters in other countries can affect U.S. assets and interests overseas (e.g. the eruption of Mt. Pinatubo in the Philippines, which effectively destroyed Clark Air Force Base). Also, because they have a disproportionate impact on developing countries, disasters are major barriers to sustainable development. Improving our ability to assess, predict, monitor, and respond to hazardous events is a key factor in reducing the occurrence and severity of disasters, and relies heavily on the use of information from well-designed and integrated Earth observation systems. To fully realize the benefits gained from the observation systems, the information derived must be disseminated through effective warning systems and networks, with products tailored to the needs of the end users and the general public.

Open-File Report

Potential warming-induced changes in stream water sources between proglacial and non-glacial streams, south-central Alaska

Snow and ice-melt are essential for global water resources. Rising air temperatures are causing vegetation encroachment and shrubification of previously snow- and ice-covered landscapes, and precipitation regimes are changing. Collectively, these changes will likely affect the hydrology of mountain environments, although the exact ways in which the hydrology will change are poorly understood. Changing source waters (i.e., the proportion of ice-melt, snowmelt, rain and groundwater) affect the timing and magnitude of streamflow and affect stream temperature, sediment, solute and nutrient fluxes. We investigate spatial and seasonal source water contributions across sub-watersheds of the Nellie Juan River watershed on Alaska's Kenai Peninsula, which differ in glacier cover, elevation and land cover, using a space-for-time approach. To do so, we use a three-endmember mixing model to quantify the contribution of rain, snow/ice-melt and deep groundwater. We show that snow/ice-melt peak later in proglacial streams compared to non-glacial streams. Endmember contributions in non-glacial streams generally vary with elevation and season. We also found that groundwater is a major contributor to streamflow across the study area, contributing between 12% and 47% seasonally, and may become increasingly important as snowpack and ice-melt decrease. This research characterises the shift from a glacierised to a deglaciating landscape through the lens of source water contribution. Broadly, these findings could help improve understanding of how water resources in glacierised watersheds are affected by warming air temperatures.

Alaska

Common and distinguishing features of the bacterial and fungal communities in biological soil crusts and shrub root zone soils

Soil microbial communities in dryland ecosystems play important roles as root associates of the widely spaced plants and as the dominant members of biological soil crusts (biocrusts) colonizing the plant interspaces. We employed rRNA gene sequencing (bacterial 16S/fungal large subunit) and shotgun metagenomic sequencing to compare the microbial communities inhabiting the root zones of the dominant shrub, Larrea tridentata (creosote bush), and the interspace biocrusts in a Mojave desert shrubland within the Nevada Free Air CO 2 Enrichment (FACE) experiment. Most of the numerically abundant bacteria and fungi were present in both the biocrusts and root zones, although the proportional abundance of those members differed significantly between habitats. Biocrust bacteria were predominantly Cyanobacteria while root zones harbored significantly more Actinobacteria and Proteobacteria. Pezizomycetes fungi dominated the biocrusts while Dothideomycetes were highest in root zones. Functional gene abundances in metagenome sequence datasets reflected the taxonomic differences noted in the 16S rRNA datasets. For example, functional categories related to photosynthesis, circadian clock proteins, and heterocyst-associated genes were enriched in the biocrusts, where populations of Cyanobacteria were larger. Genes related to potassium metabolism were also more abundant in the biocrusts, suggesting differences in nutrient cycling between biocrusts and root zones. Finally, ten years of elevated atmospheric CO 2 did not result in large shifts in taxonomic composition of the bacterial or fungal communities or the functional gene inventories in the shotgun metagenomes.

Nevada

Songbirds as sentinels of mercury in terrestrial habitats of eastern North America

Mercury (Hg) is a globally distributed environmental contaminant with a variety of deleterious effects in fish, wildlife, and humans. Breeding songbirds may be useful sentinels for Hg across diverse habitats because they can be effectively sampled, have well-defined and small territories, and can integrate pollutant exposure over time and space. We analyzed blood total Hg concentrations from 8,446 individuals of 102 species of songbirds, sampled on their breeding territories across 161 sites in eastern North America [geometric mean Hg concentration = 0.25 &mu;g/g wet weight (ww), range <0.01&ndash;14.60 &mu;g/g ww]. Our records span an important time period&mdash;the decade leading up to implementation of the USEPA Mercury and Air Toxics Standards, which will reduce Hg emissions from coal-fired power plants by over 90 %. Mixed-effects modeling indicated that habitat, foraging guild, and age were important predictors of blood Hg concentrations across species and sites. Blood Hg concentrations in adult invertebrate-eating songbirds were consistently higher in wetland habitats (freshwater or estuarine) than upland forests. Generally, adults exhibited higher blood Hg concentrations than juveniles within each habitat type. We used model results to examine species-specific differences in blood Hg concentrations during this time period, identifying potential Hg sentinels in each region and habitat type. Our results present the most comprehensive assessment of blood Hg concentrations in eastern songbirds to date, and thereby provide a valuable framework for designing and evaluating risk assessment schemes using sentinel songbird species in the time after implementation of the new atmospheric Hg standards.

Ecotoxicology

The impact of ventilation patterns on calcite dissolution rates within karst conduits

Erosion rates in streams vary dramatically over time, as differences in streamflow and sediment load enhance or inhibit erosion processes. Within cave streams, and other bedrock channels incising soluble rocks, changes in water chemistry are an important factor in determining how erosion rates will vary in both time and space. Prior studies in surface streams, springs, and caves suggest that variation in dissolved CO 2 is the strongest control on variation in calcite dissolution rates. However, the controls on CO 2 variation remain poorly quantified. Limited data suggest that ventilation of karst systems can substantially influence dissolved CO 2 within karst conduits. However, the interactions among cave ventilation, air-water CO 2 exchange, and dissolution dynamics have not been studied in detail. In this study, three years of time series measurements of dissolved and gaseous CO 2 , cave airflow velocity, and specific conductance from Blowing Springs Cave, Arkansas, were analyzed and used to estimate continuous calcite dissolution rates and quantify the correlations between those rates and potential physical and chemical drivers. We find that chimney effect airflow creates temperature-driven switches in airflow direction, and that the resulting seasonal changes in airflow regulate both gaseous and dissolved CO 2 within the cave. As in previous studies, partial pressure of CO 2 ( p CO 2 ) is the strongest chemical control of dissolution rate variability. However, we also show that cave airflow direction, rather than streamflow, is the strongest physical driver of changes in dissolution rate, contrary to the typical situation in surface channel erosion where floods largely determine the timing and extent of geomorphic work. At the study site, chemical erosion is typically active in the summer, during periods of cave downdraft (airflow from upper to lower entrances), and inactive in the winter, during updraft (airflow from lower to upper entrances). Storms provide only minor perturbations to this overall pattern. We also find that airflow direction modulates dissolution rate variation during storms, with higher storm variability during updraft than during downdraft. Finally, we compare our results with the limited set of other studies that have examined dissolution rate variation within cave streams and draw an initial hypothesis that evolution of cave ventilation patterns strongly impacts how dissolution rate dynamics evolve over the lifetime of karst conduits.

Arkansas, Missouri

Cruise report for P1-13-LA, U.S. Geological Survey gas hydrates research cruise, R/V Pelican April 18 to May 3, 2013, deepwater Gulf of Mexico

The U.S. Geological Survey led a seismic acquisition cruise in the Gulf of Mexico from April 18 to May 3, 2013, with the objectives of (1) achieving improved imaging and characterization at two established gas hydrate study sites, and (2) refining geophysical methods for gas hydrate characterization in other locations. We conducted this acquisition aboard the R/V Pelican, and used a pair of 105/105-cubic-inch generator/injector air guns to provide seismic energy that we recorded using a 450-meter 72-channel digital hydrophone streamer and 25 multicomponent ocean-bottom seismometers. In the area of lease block Green Canyon 955, we deployed 21 ocean-bottom seismometers and acquired approximately 400 kilometers of high-resolution two-dimensional streamer seismic data in a grid with line spacing as small as 50 meters and along radial lines that provide source offsets up to 10 kilometers and diverse azimuths for the ocean-bottom seismometers. In the area of lease block Walker Ridge 313, we deployed 25 ocean-bottom seismometers and acquired approximately 450 kilometers of streamer seismic data in a grid pattern with line spacing as small as 250 meters and along radial lines that provide source offsets up to 10 kilometers for the ocean-bottom seismometers. The data acquisition effort was conducted safely and met the scientific objectives.

Open-File Report

High-resolution seismic-reflection profiles collected by the R/V Columbus Iselin, cruise CI 7807-1, in the Baltimore Canyon outer continental shelf area, offshore New Jersey

High-resolution seismic-reflection profiles were collected by the U.S. Geological Survey (USGS) aboard R/V COLUMBUS ISELIN, cruise 7807-1, from 18 August to 4 September 1978 over the Continental Slope of the Eastern United States between Wilmington and Hudson Canyons. These data were acquired as part of a study to determine potential geologic hazards to petroleum development of the Baltimore Canyon trough area. On this cruise, the Continental Slope between Lindenkohl and Carteret Canyons was surveyed along lines spaced one-half nautical mile apart to study the size and distribution of mass-wasting features as a guide to assess the importance of mass wasting processes on the Continental Slope. The seismic-reflection profiles were placed to complement other data gathered previously by the USGS. Track-line distances totaled 2,050 km of 40-in3 air-gun (with wave shaper) profiles, 2,100 km of 800-J sparker data, and 2,100 km of 3 .5-kHz data. The air-gun and sparker profiles are of high quality, but the 3.5-kHz system did not function well and achieved no subbottom penetration. The side-scan sonar system was operated along the uppermost Continental Slope to investigate its potential for use in this environment. Data were acquired over 22 km of ship's track. Navigation was by Loran-C (5-minute fix interval). The original records can be examined at the U.S. Geological Survey offices in Woods Hole, Massachusetts 02543. Microfilm copies of the data are available for purchase from the National Geophysical and Solar-Terrestrial Data Center (NGSDC), Boulder, Colorado 80303.

Open-File Report

Interactions between soil thermal and hydrological dynamics in the response of Alaska ecosystems to fire disturbance

Soil temperature and moisture are important factors that control many ecosystem processes. However, interactions between soil thermal and hydrological processes are not adequately understood in cold regions, where the frozen soil, fire disturbance, and soil drainage play important roles in controlling interactions among these processes. These interactions were investigated with a new ecosystem model framework, the dynamic organic soil version of the Terrestrial Ecosystem Model, that incorporates an efficient and stable numerical scheme for simulating soil thermal and hydrological dynamics within soil profiles that contain a live moss horizon, fibrous and amorphous organic horizons, and mineral soil horizons. The performance of the model was evaluated for a tundra burn site that had both preburn and postburn measurements, two black spruce fire chronosequences (representing space-for-time substitutions in well and intermediately drained conditions), and a poorly drained black spruce site. Although space-for-time substitutions present challenges in model-data comparison, the model demonstrates substantial ability in simulating the dynamics of evapotranspiration, soil temperature, active layer depth, soil moisture, and water table depth in response to both climate variability and fire disturbance. Several differences between model simulations and field measurements identified key challenges for evaluating/improving model performance that include (1) proper representation of discrepancies between air temperature and ground surface temperature; (2) minimization of precipitation biases in the driving data sets; (3) improvement of the measurement accuracy of soil moisture in surface organic horizons; and (4) proper specification of organic horizon depth/properties, and soil thermal conductivity.

Alaska

Aquifer-system compaction and land subsidence: Measurements, analyses, and simulations – The Holly Site, Edwards Air Force Base, Antelope Valley, California

Land subsidence resulting from ground-water-level declines has long been recognized as a problem in Antelope Valley, California. At Edwards Air Force Base (EAFB), ground-water extractions have caused more than 150 feet of water-level decline, resulting in nearly 4 feet of subsidence. Differential land subsidence has caused sinklike depressions and earth fissures and has accelerated erosion of the playa lakebed surface of Rogers Lake at EAFB, adversely affecting the runways on the lakebed which are used for landing aircraft such as the space shuttles. Since 1990, about 0.4 foot of aquifer-system compaction has been measured at a deep (840 feet) borehole extensometer (Holly site) at EAFB. More than 7 years of paired ground-water-level and aquifer-system compaction measurements made at the Holly site were analyzed for this study. Annually, seasonal water-level fluctuations correspond to steplike variations in aquifer-system compaction; summer water-level drawdowns are associated with larger rates of compaction, and winter water-level recoveries are associated with smaller rates of compaction. The absence of aquifer-system expansion during recovery is consistent with the delayed drainage and resultant delayed, or residual, compaction of thick aquitards. A numerical one-dimensional MODFLOW model of aquitard drainage was used to refine estimates of aquifer-system hydraulic parameters that control compaction and to predict potential future compaction at the Holly site. The analyses and simulations of aquifer-system compaction are based on established theories of aquitard drainage. Historical ground-water-level and land-subsidence data collected near the Holly site were used to constrain simulations of aquifer-system compaction and land subsidence at the site for the period 1908-90, and ground-water-level and aquifer- system compaction measurements collected at the Holly site were used to constrain the model for the period 1990-97. Model results indicate that two thick aquitards, which total 129 feet or about half the aggregate thickness of all the aquitards penetrated by the Holly boreholes, account for most (greater than 99 percent) of the compaction measured at the Holly site during the period 1990-97. The results of three scenarios of future water-level changes indicate that these two thick aquitards account for most of the future compaction. The results also indicate that if water levels decline to about 30 feet below the 1997 water levels an additional 1.7 feet of compaction may occur during the next 30 years. If water levels remain at 1997 levels, the model predicts that only 0.8 foot of compaction may occur during the same period, and even if water levels recover to about 30 feet above 1997 water levels, another 0.5 foot of compaction may occur in the next 30 years. In addition, only a portion of the compaction that ultimately will occur likely will occur within the next 30 years; therefore, the residual compaction and associated land subsidence attributed to slowly equilibrating aquitards is important to consider in the long-term management of land and water resources at EAFB.

California