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At least 703 records · Page 39Linked to original sources
USGS1968

Mineral investigations in the Jabal Radwa quadrangle, northwest Hijaz, Saudi Arabia

Wadi sediments in the Jabal Radwa quadrangle in the Northwest Hijaz were sampled for trace element analysis as part of a mineral reconnaissance of Western Saudi Arabia that is being made by the Ministry of Petroleum and Mineral Resources and the U.S. Geological Survey. The Jabal Radwa quadrangle lies between 24?30? and 25?N. latitude and between 38? and 39? longitude. A photomosaic base at a scale of 1:100,000 was used for map compilation. Except for basalt flows of Tertiary or Quaternary age all the rocks of the area are believed to be of Precambrian age. An older group of slightly metamorphosed mafic and felsic volcanic rocks with interbedded metasedimentary rocks is unconformably overlain by argillite and slightly metamorphosed sandstone and conglomerate. The bedded rocks are cut by many intrusions that range in composition from olivine gabbro to syenite but are predominantly granite, granodiorite, and diorite. Little is known of the structure of the rocks. The layered rocks are strongly folded and commonly dip at high angles. Faults are common and many appear to be large; some contacts have been offset several hundred meters. Most of the larger faults trend northeasterly or northwesterly but some trend east and others nearly north.

Open-File Report↗
USGS1988

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Tulare Lake bed area, southern San Joaquin Valley, California, 1986-87

Concentrations of numerous toxic trace elements and pesticides were measured during 1986 in water, sediment, and biota from three areas near the Tulare Lake Bed, southern San Joaquin Valley, California: Kern National Wildlife Refuge, Pixley National Wildlife Refuge, and Westfarmers evaporation ponds about 5 mi west of Kern National Wildlife Refuge, to determine whether toxic constituents in agricultural-irrigation drainage pose a threat to beneficial uses of water, especially to uses by wildlife. Pesticide residues were found to be low at all three areas. Trace element concentrations were found to be comparatively low at the Kern and Pixley National Wildlife Refuge areas and high at the Westfarmers evaporation ponds. Dissolved selenium concentrations were < 1 micrograms/L (ug/L) in areas on and adjacent to the refuges, but ranged from 110 to 360 ug/L in the saline drainwater impounded in the evaporation ponds. The ratio of mean selenium concentrations in biota from Westfarmers ponds compared to biota from Kesterson National Wildlife Refuge (where adverse effects have been documented) is 5 for waterboatman, 2 for avocet liver, 1 for avocet eggs, and < 1 for widgeongrass. The low concentrations measured at Kern and Pixley National Wildlife Refuges suggest that trace elements and pesticides pose little threat to wildlife there; however, impounded subsurface drainage from agricultural irrigation does pose a threat to wildlife at the nearby Westfarmers ponds. Preliminary results of surveys conducted in 1987 indicated that there are adverse biological effects on shorebirds nesting at the ponds, although interpretation of the magnitude of the effects is premature, pending completion of ongoing studies by the U.S. Fish and Wildlife Service. (Author 's abstract)

Water-Resources Investigations Report↗
USGS2003

Sediment deposition and occurrence of selected nutrients, other chemical constituents, and diatoms in bottom sediment, Perry Lake, northeast Kansas, 1969–2001

A combination of bathymetric surveying and bottom-sediment coring was used to investigate sediment deposition and the occurrence of selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 26 metals and trace elements, 15 organochlorine compounds, 1 radionuclide, and diatoms in bottom sediment of Perry Lake, northeast Kansas. The total estimated volume and mass of bottom sediment deposited from 1969 through 2001 in the original conservation-pool area of the lake was 2,470 million cubic feet (56,700 acre-feet) and 97,200 million pounds (44,100 million kilograms), respectively. The estimated sediment volume occupied about 23 percent of the original conservation-pool, water-storage capacity of the lake. Mean annual net sediment deposition since 1969 was estimated to be 3,040 million pounds (1,379 million kilograms). Mean annual sediment yield from the Perry Lake Basin was estimated to be 2,740,000 pounds per square mile (4,798 kilograms per hectare). The estimated mean annual net loads of total nitrogen and total phosphorus deposited in the bottom sediment of Perry Lake were 7,610,000 pounds per year (3,450,000 kilograms per year) and 3,350,000 pounds per year (1,520,000 kilograms per year), respectively. The estimated mean annual yields of total nitrogen and total phosphorus from the Perry Lake Basin were 6,850 pounds per square mile per year (12.0 kilograms per hectare per year) and 3,020 pounds per square mile per year (5.29 kilograms per hectare per year), respectively. A statistically significant positive trend for total nitrogen deposition in the bottom sediment of Perry Lake was indicated. However, the trend may be due solely to analytical variance. No statistically significant trend for total phosphorus deposition was indicated. Overall, the transport and deposition of these constituents have been relatively uniform throughout the history of Perry Lake. On the basis of nonenforceable sediment-quality guidelines established by the U.S. Environmental Protection Agency, concentrations of arsenic, chromium, copper, and nickel in the bottom sediment of Perry Lake typically exceeded the threshold-effects levels, which represent the concentrations above which toxic biological effects occasionally occur. Most nickel concentrations also exceeded the probable-effects level, which represents the concentration above which toxic biological effects usually or frequently occur. Sediment concentrations of metals and trace elements were relatively uniform over time. Statistically significant positive depositional trends for arsenic and manganese and statistically significant negative depositional trends for beryllium, chromium, titanium, and vanadium were indicated. However, the trends may be due solely to analytical variance. Organochlorine compounds either were not detected or were detected at concentrations less than the threshold-effects levels. Evidence of a negative depositional trend for DDE (degradation product of DDT) was consistent with the history of DDT use. Other organochlorine compounds detected were DDD and dieldrin. Diatom occurrence in the bottom sediment of Perry Lake was dominated by species that are indicators of eutrophic (nutrient-rich) conditions. Thus, it was concluded that eutrophic conditions have existed during much of the history of Perry Lake. However, an increase in the relative percentage abundance of the oligotrophic (nutrient-poor) species, combined with the significant positive depositional trends for two oligotrophic species ( Aulacoseira islandica and Cyclotella radiosa ) and the significant negative depositional trend for one eutrophic species ( Stephanodiscus niagarae ), indicated that conditions in Perry Lake may have become less eutrophic in recent years. Notable changes in human activity within the basin included a substantial decrease in alfalfa production and a substantial increase in soybean production from 1965 to 2000. These and other changes in human activity may have had some effect on the deposition of chemical constituents and diatoms in the bottom sediment of Perry Lake. It is uncertain whether changes in human activity may account, in part, for the possibility of Perry Lake becoming less eutrophic over time as indicated by trends in the deposition of several diatom species in the lake-bed sediment.

Kansas↗
USGS1997

Summary of information on aquatic biota and their habitats in the Willamette Basin, Oregon, through 1995

Available information on aquatic biota of the Willamette Basin was reviewed and summarized to describe current and historical conditions as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Biological parameters emphasized include the status, distribution, and trends of aquatic biota, particularly algae, macroinvertebrates, and fish; the condition of aquatic and riparian habitat in which these biota reside; and the response of these biota to natural and human-associated impacts, including the level, type, and effect of contaminants. Considerable data are available on aquatic biota in the Willamette Basin, although the information is highly uneven relative to taxa and spatial scope. Extensive information exists for high-profile taxa, such as salmonid fishes, but less information is available for macroinvertebrates, and relatively little data exist for algae. Additionally, some areas such as the H.J. Andrews Experimental Forest and the main stem Willamette River have been extensively studied, whereas data are limited for many other areas. The basin supports a diverse aquatic macroinvertebrate fauna. Available data indicate a relatively high diversity of taxa and a high richness of Ephemeroptera, Plecoptera, Trichoptera (EPT) taxa in the upper reaches of the basin. In the lower main stem reaches, macroinvertebrate assemblages are dominated by pollution tolerant organisms and those adapted to low dissolved oxygen levels. Most of the limited data on algae are from sampling in the main stem Willamette River. Diatoms and blue-green algae are the dominant algal forms. Approximately 61 fish species occur in the basin, although nearly half are introduced. Species richness and distribution are highly correlated with elevation, stream gradient, and water temperature. High elevation, cold water, mountain streams are characterized by a few species of salmonids, sculpins, suckers, and whitefish. Low elevation, main stem reaches of major rivers and streams are dominated by warm water species, such as bass, catfish, and several species in the pan fish group. The only species of fish listed as threatened or endangered is the Oregon chub (Oregonichthys crameri). The effect of an expanding human presence in the Willamette Basin has substantially altered aquatic and riparian habitats, and the biota that use or reside in these habitats. Construction of dams, channelization and bank stabilization of rivers, species introductions, supplementations of fisheries through aquaculture, timber harvesting, agricultural activities, and urbanization have contributed to changes in aquatic habitats and biota from historical conditions. Aquatic toxicological investigations in the basin have focused primarily on fish. These studies have addressed chlorinated pesticides, polychlorinated biphenyls (PCBs), dioxins and furans, polycyclic aromatic hydrocarbons (PAHs), and trace elements in aquatic tissue, as well as fish health assessments, skeletal abnormalities, and aquatic toxicological responses. Several pesticides exceeded U.S. Environmental Protection Agency and State water-quality criteria for the protection of aquatic life. Elevated PCB, dioxin, and furan concentrations were associated with point sources, such as pulp and paper mills. Elevated concentrations of mercury in aquatic tissue were associated with several reservoirs. Fish health assessments and skeletal abnormality studies detected high levels of abnormalities in fish from the main stem Willamette River. Few investigations have examined aquatic toxicological responses, such as enzyme induction assays, growth assays, and biomarker studies.

Oregon↗
USGS1973

Inorganic chemical investigation by x-ray fluorescence analysis: The Viking Mars Lander

The inorganic chemical investigation added in August 1972 to the Viking Lander scientific package will utilize an energy-dispersive X-ray fluorescence spectrometer in which four sealed, gas-filled proportional counters will detect X-rays emitted from samples of the Martian surface materials irradiated by X-rays from radioisotope sources ( 55 Fe and 109 Cd). The output of the proportional counters will be subjected to pulse-height analysis by an on-board step-scanning single-channel analyzer with adjustable counting periods. The data will be returned to Earth, via the Viking Orbiter relay system, and the spectra constructed, calibrated, and interpreted here. The instrument is inside the Lander body, and samples are to be delivered to it by the Viking Lander Surface Sampler. Calibration standards are an integral part of the instrument. The results of the investigation will characterize the surface materials of Mars as to elemental composition with accuracies ranging from a few tens of parts per million (at the trace-element level) to a few percent (for major elements) depending on the element in question. Elements of atomic number 11 or less are determined only as a group, though useful estimates of their individual abundances maybe achieved by indirect means. The expected radiation environment will not seriously hamper the measurements. Based on the results, inferences can be drawn regarding (1) the surface mineralogy and lithology; (2) the nature of weathering processes, past and present, and the question of equilibrium between the atmosphere and the surface; and (3) the extent and type of differentiation that the planet has undergone. The Inorganic Chemical Investigation supports and is supported by most other Viking Science investigations.

Icarus↗
USGS2005

Temporal changes in water quality at a childhood leukemia cluster

Since 1997, 15 cases of acute lymphocytic leukemia and one case of acute myelocytic leukemia have been diagnosed in children and teenagers who live, or have lived, in an area centered on the town of Fallon, Nevada. The expected rate for the population is about one case every five years. In 2001, 99 domestic and municipal wells and one industrial well were sampled in the Fallon area. Twenty-nine of these wells had been sampled previously in 1989. Statistical comparison of concentrations of major ions and trace elements in those 29 wells between 1989 and 2001 using the nonparametric Wilcoxon signed-rank test indicate water quality did not substantially change over that period; however, short-term changes may have occurred that were not detected. Volatile organic compounds were seldom detected in ground water samples and those that are regulated were consistently found at concentrations less than the maximum contaminant level (MCL). The MCL for gross-alpha radioactivity and arsenic, radon, and uranium concentrations were commonly exceeded, and sometimes were greatly exceeded. Statistical comparisons using the nonparametric Wilcoxon rank-sum test indicate gross-alpha and -beta radioactivity, arsenic, uranium, and radon concentrations in wells used by families having a child with leukemia did not statistically differ from the remainder of the domestic wells sampled during this investigation. Isotopic measurements indicate the uranium was natural and not the result of a 1963 underground nuclear bomb test near Fallon. In arid and semiarid areas where trace-element concentrations can greatly exceed the MCL, household reverse-osmosis units may not reduce their concentrations to safe levels. In parts of the world where radon concentrations are high, water consumed first thing in the morning may be appreciably more radioactive than water consumed a few minutes later after the pressure tank has been emptied because secular equilibrium between radon and its immediate daughter progeny is attained in pressure tanks overnight.

Ground Water↗
USGS2006

Particle-associated contaminants in street dust, parking lot dust, soil, lake-bottom sediment, and suspended and streambed sediment, Lake Como and Fosdic Lake watersheds, Fort Worth, Texas, 2004

A previous study by the U.S. Geological Survey of impaired water bodies in Fort Worth, Texas, reported elevated but variable concentrations of particle-associated contaminants (PACs) comprising chlorinated hydrocarbons, polycyclic aromatic hydrocarbons, and trace elements in suspended and bed sediment of lakes and streams affected by urban land use. The U.S. Geological Survey, in cooperation with the City of Fort Worth, collected additional samples during October 2004 to investigate sources of PACs in the watersheds of two impaired lakes: Lake Como and Fosdic Lake. Source materials and aquatic sediment were sampled and analyzed for PACs. Source materials sampled consisted of street dust and soil from areas with residential and commercial land use and parking lot dust from sealed and unsealed parking lots. Aquatic sediment sampled consisted of bottom-sediment cores from the two lakes and suspended and streambed sediment from the influent stream of each lake. Samples were analyzed for chlorinated hydrocarbons (organochlorine pesticides and polychlorinated biphenyls), polycyclic aromatic hydrocarbons, major and trace elements, organic carbon, grain size, and radionuclides.

Texas↗
USGS2009

Relative spatial soil geochemical variability along two transects across the United States and Canada

To support the development of protocols for the proposed North American Soil Geochemical Landscapes project, whose objective is to establish baselines for the geochemistry of North American soils, two continental-scale transects across the United States and Canada were sampled in 2004. The sampling employed a spatially stratified random sampling design in order to estimate the variability between 40-km linear sampling units, within them, at sample sites, and due to sample preparation and analytical chemical procedures. The 40-km scale was chosen to be consistent with the density proposed for the continental-scale project. The two transects, north&ndash;south (N&ndash;S) from northern Manitoba to the USA&ndash;Mexico border near El Paso, Texas, and east&ndash;west (E&ndash;W) from the Virginia shore north of Washington, DC, to north of San Francisco, California, closely following the 38th parallel, have been studied individually. The purpose of this study was to determine if statistically significant systematic spatial variation occurred along the transects. Data for 38 major, minor and trace elements in A- and C-horizon soils where less than 5% of the data were below the detection limit were investigated by Analysis of Variance (ANOVA). A total of 15 elements (K, Na, As, Ba, Be, Ce, La, Mn, Nb, P, Rb, Sb, Th, Tl and W) demonstrated statistically significant ( p <0.05) variability at the between-40-km scale for both horizons along both transects. Only Cu failed to demonstrate significant variability at the between-40-km scale for both soil horizons along both transects. The patterns of relative variability differ by transect and horizon. The N&ndash;S transect A-horizon soils show significant between-40-km scale variability for 29 elements, with only 4 elements (Ca, Mg, Pb and Sr) showing in excess of 50% of their variability at the within-40-km and &lsquo;at-site&rsquo; scales. In contrast, the C-horizon data demonstrate significant between-40-km scale variability for 26 elements, with 21 having in excess of 50% of their variability at the within-40-km and &lsquo;at-site&rsquo; scales. In 36 instances, the &lsquo;at-site&rsquo; variability is statistically significant in terms of the sample preparation and analysis variability. It is postulated that this contrast between the A- and C- horizons along the N&ndash;S transect, that is dominated by agricultural land uses, is due to the local homogenization of Ap-horizon soils by tillage reducing the &lsquo;at-site&rsquo; variability. The spatial variability is distributed similarly between scales for the A- and C-horizon soils of the E&ndash;W transect. For all elements, there is significant variability at the within-40-km scale. Notwithstanding this, there is significant between-40-km variability for 28 and 20 of the elements in the A- and C-horizon data, respectively. The differences between the two transects are attributed to (1) geology, the N&ndash;S transect runs generally parallel to regional strikes, whereas the E&ndash;W transect runs across regional structures and lithologies; and (2) land use, with agricultural tillage dominating along the N&ndash;S transect. The spatial analysis of the transect data indicates that continental-scale maps demonstrating statistically significant patterns of geochemical variability may be prepared for many elements from data on soil samples collected on a 40 x 40 km grid or similar sampling designs resulting in a sample density of 1 site per 1600 km 2 .

Applied Geochemistry↗
USGS2016

Sediment chemistry and toxicity in Barnegat Bay, New Jersey: Pre- and post-Hurricane Sandy, 2012–13

Hurricane Sandy made landfall in Barnegat Bay, October, 29, 2012, damaging shorelines and infrastructure. Estuarine sediment chemistry and toxicity were investigated before and after to evaluate potential environmental health impacts and to establish post-event baseline sediment-quality conditions. Trace element concentrations increased throughout Barnegat Bay up to two orders of magnitude, especially north of Barnegat Inlet, consistent with northward redistribution of silt. Loss of organic compounds, clay, and organic carbon is consistent with sediment winnowing and transport through the inlets and sediment transportmodeling results. The number of sites exceeding sediment quality guidance levels for trace elements tripled post-Sandy. Sediment toxicity post-Sandy was mostly unaffected relative to pre-Sandy conditions, but at the site with the greatest relative increase for trace elements, survival rate of the test amphipod decreased (indicating degradation). This study would not have been possible without comprehensive baseline data enabling the evaluation of storm-derived changes in sediment quality.

New Jersey↗
USGS2009

Benthic nutrient sources to hypereutrophic Upper Klamath Lake, Oregon, USA

Three collecting trips were coordinated in April, May, and August 2006 to sample the water column and benthos of hypereutrophic Upper Klamath Lake (OR, USA) through the annual cyanophyte bloom of Aphanizomenon flos‐aquae . A pore‐water profiler was designed and fabricated to obtain the first high‐resolution (centimeter‐scale) estimates of the vertical concentration gradients of macro‐ and micronutrients for diffusive‐flux determinations. A consistently positive benthic flux for soluble reactive phosphorus (SRP) was observed with solute release from the sediment, ranging between 0.4 and 6.1 mg/m 2 /d. The mass flux over an approximate 200‐km 2 lake area was comparable in magnitude to riverine inputs. An additional concern related to fish toxicity was identified when dissolved ammonium also displayed consistently positive benthic fluxes of 4 to 134 mg/m 2 /d, again comparable to riverine inputs. Although phosphorus was a logical initial choice by water quality managers for the limiting nutrient when nitrogen‐fixing cyanophytes dominate, initial trace‐element results from the lake and major inflowing tributaries suggested that the role of iron limitation on primary productivity should be investigated. Dissolved iron became depleted in the lake water column during the course of the algal bloom, while dissolved ammonium and SRP increased. Elevated macroinvertebrate densities, at least of the order of 10 4 individuals/m 2 , suggested that the diffusive‐flux estimates may be significantly enhanced by bioturbation. In addition, heat‐flux modeling indicated that groundwater advection of nutrients could also significantly contribute to internal nutrient loading. Accurate environmental assessments of lentic systems and reasonable expectations for point‐source management require quantitative consideration of internal solute sources.

Environmental Toxicology and Chemistry↗
USGS1990

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Salton Sea area, California, 1986-87

Water, bottom sediment, and biota were sampled during 1986 and 1987 in the Salton Sea area to determine concentrations of trace elements and pesticides as part of the Department of Interior Irrigation Drainage Program. The sampling sites (12 water, 15 bottom sediment, and 5 biota) were located in the Coachella and Imperial Valleys. The focus of sampling was to determine the current or potential threat to the wildlife of the Salton National Wildlife Refuge from irrigation projects sponsored or operated by the Department of the Interior. Results of the investigation indicate that selenium is the major element of concern. Elevated concentrations of selenium in water were restricted to tile-drain effluent. The maximum selenium concentration of 300 microg/L was detected in a tile-drain sample, and the minimum concentration of 1 microg/L was detected in a composite sample of Salton Sea water. The median selenium concentration was 19 microg/L. In contrast to the water, the highest bottom-sediment selenium concentration of 3.3 mg/kg was in a composite sample from the Salton Sea. The selenium detected in samples of waterfowl and fish also are of concern, but, to date, no studies have been done in the Salton Sea area to determine if selenium has caused adverse biological effects. Concentrations of boron and manganese were elevated in tile-drain samples throughout the Imperial Valley. Boron concentrations in migratory waterfowl were at levels that could cause reproduction impairment. Elevated concentrations of chromium, nickel, and zinc were detected in the Whitewater River , but they were not associated with irrigation drainage. Organochlorine pesticide residues were detected in bottom sediment throughout the study area at levels approaching those measured more than 10 years ago. More detailed studies would be needed to determine if these residues are affecting the waterfowl. (USGS)

Water-Resources Investigations Report↗
USGS1979

Hydraulic potential in Lake Michigan bottom sediments

The magnitude and direction of groundwater flux in the bottom sediments of Lake Michigan were deduced from measurements made during three shipboard cruises between 1973 and 1975. These factors affect the geochemical environment of the sediments and therefore the distribution of trace elements reported to be present. The near-shore, sandy-bottom and fine-grained, soft, deep-lake sediments were investigated; areas of hard till or bedrock were not included in the study. Thirty-three piezometers were placed in near-shore sands in waters 5-15 m deep. The piezometers were placed an average of 3 m into the bottom sediment. Water levels from the piezometers averaged 0.6 cm above the lake level, equivalent to an upward hydraulic gradient of about 0.002 cm/cm. Water samples taken from the piezometers have a distinctly different chemical composition from that of the lake water. The total dissolved mineral content and hardness of the groundwater are about twice those of the lake water. Twenty-two hydraulic gradient measurements were made in the fine-grained soft deep-lake sediments in waters 48-140 m deep by using a differential-pressure transducer dropped into the sediments. These measurements show an upward gradient averaging 0.2 cm/cm. No chemical data were obtained for the groundwater in the deep-lake sediments. The results of this study indicate that the groundwater flux is upward through the bottom sediments into Lake Michigan and that there is a chemical change in the water near the water-sediment contact.

Lake Michigan↗
USGS2017

Element partitioning in magnetite under low-grade metamorphic conditions – A case study from the Proterozoic Belt Supergroup, USA

The distribution and partitioning of elements in igneous rocks is well established for various melt –(fluid) –solid pairs and provides important insights into the petrogenesis of these rocks. Studies of the partitioning behavior of elements under metamorphic conditions are scarce and commonly focus on high-grade metamorphic facies. Little is known about the partitioning behavior of elements under low-grade metamorphic conditions. Greenschist-facies metasedimentary rocks of the North American Belt Supergroup host magnetite that displays equilibrium features with co-existing mineral phases such as quartz and carbonate. Magnetite is an ideal target for geochemical investigations because it can incorporate a large number of cations and is sensitive to changes in temperature, oxygen fugacity, pressure, whole-rock composition, and cooling trends. Whole-rock major and trace element analyses have been undertaken on representative samples from Belt Supergroup metasedimentary rocks using X-ray luorescence. Electron microprobe and laser ablation ICP-MS were used to obtain major and trace element concentrations for magnetite hosted in these rocks. Stable-isotope geothermometry of magnetite–quartz and magnetite–carbonate pairs constrain metamorphic temperatures to ca. 390°C. Partition coefficients (D) for magnetite–matrix pairs presumably reflect equilibrium at these low-grade metamorphic conditions. Except for Mn and Ni, which show comparable partition coefficients, the calculated values are one to two orders of magnitude lower than those for igneous magnetite. Aluminum displays the lowest calculated partition coefficient with a value of 0.006 and Ni and Fe the highest values with 6.3 and 20.9, respectively. Of the elements that commonly occur in spinel-group minerals, two groups can be distinguished: (1) elements that preferentially partition into the host rock (D<1): Al, Mg, Pb, and Ti and (2) elements that show a preference to partition into magnetite (D>1): Zn, Mn, Cr, V, Ni, and Fe.

European Journal of Mineralogy↗
USGS2008

Metals and trace elements in giant garter snakes (Thamnophis gigas) from the Sacramento Valley, California, USA

The giant garter snake (GGS; Thamnophis gigas ) is a federally listed threatened species endemic to wetlands of the Central Valley of California. Habitat destruction has been the main factor in the decline of GGS populations, but the effects of contaminants on this species are unknown. To contribute to the recovery of these snakes, the U.S. Geological Survey (USGS) began studies of the life history and habitat use of GGSs in 1995. During a series of investigations conducted from 1995 to the present, specimens of dead GGSs were opportunistically collected from the Colusa National Wildlife Refuge (CNWR), the Natomas Basin, and other sites in northern California. Whole snakes were stored frozen for potential future analysis. As funding became available, we analyzed tissues of 23 GGSs to determine the concentrations of total mercury (Hg) and other trace elements in livers and concentrations of Hg in brains and tail clips. Mercury concentrations (μg/g, wet weight) ranged from 0.08 to 1.64 in livers, 0.01 to 0.18 in brains, and 0.02 to 0.32 in tail clips. In livers, geometric mean concentrations (μg/g, dry weight) of arsenic (25.7) and chromium (1.02) were higher than most values from studies of other snakes. Mercury concentrations in tail clips were positively correlated with concentrations in livers and brains, with the most significant correlations occurring at the Natomas Basin and when Natomas and CNWR were combined. Results indicate the value of using tail clips as a nonlethal bioindicator of contaminant concentrations.

Archives of Environmental Contamination and Toxico↗
USGS2021

Investigation of otolith microstructure and composition for identification of rearing strategies and associated Baker Lake sockeye salmon (Oncorhynchus nerka) smolt production, Washington, 2016–17

Baker River (Washington, USA) sockeye salmon (Oncorhynchus nerka) are a recovering Puget Sound stock that are aided by trap-and-haul and hatchery programs to mitigate for the presence of a high head dam. The relative contribution of hatchery and natural adults to overall production of smolts and recruits is unknown. The ability to identify three different sockeye production groups (natural production, artificial incubation, and artificial spawning beach) within the Baker system is crucial to moving forward with management goals. The examination of otoliths was proposed as a technical tool for improved understanding and management of Baker sockeye rebuilding efforts. Otoliths were chosen as they provide a chronological record on an individual fish basis and have been shown to identify fish origin through both otolith microstructure and chemistry. The goal of this pilot project was to determine the feasibility of assigning sockeye to their production source based on otolith analysis. A variety of methods were employed and compared for accuracy of group assignment. The maximum overall accuracy capable of attainment was 88.57 percent, however complete confidence (100 percent) in the separation of natural production from artificial production was reached through the analysis of trace elements alone. Some segregation of the two artificial production groups was reached through analysis of a few specific trace elements (magnesium, manganese, and zinc). This confidence in assignment for the artificial production groups was aided by a two-step process of combining trace elements with microstructure. The Sr isotope ratios supported the trace element findings but did not help to boost the overall level of confidence in the separation of production groups. Based upon the results from this preliminary investigation, one could choose a statistically sound, efficient, and cost-effective use of otoliths as a tool for discriminating between the sockeye production groups of the Baker Lake system.

Washington↗