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At least 685 records · Page 38Linked to original sources

USGS2016

Summer-autumn habitat use of yearling rainbow trout in two streams in the Lake Ontario watershed

Understanding the habitat requirements of salmonids in streams is an important component of fisheries management. We examined the summer and autumn habitat use of yearling Rainbow Trout Oncorhynchus mykiss in relation to available habitat in two streams in the Lake Ontario watershed. Little interstream variation in trout habitat use was observed; the variation that did occur was largely due to differences between streams in available habitat in the autumn. In both streams, yearling Rainbow Trout utilized pool habitat and during periods of high stream discharge were associated with larger substrate that may provide a velocity barrier. These findings may assist resource managers in their efforts to protect and restore habitat for migratory Rainbow Trout in the Lake Ontario watershed.

New York↗

USGS2016

Long-term trends in naturalized rainbow trout ( Oncorhynchus mykiss ) populations in the upper Esopus Creek, Ulster County, New York, 2009–15

The U.S. Geological Survey, in cooperation with Cornell Cooperative Extension of Ulster County, New York State Energy Research and Development Authority, the New York State Department of Environmental Conservation, and the New York City Department of Environmental Protection, surveyed fish communities annually on the main stem and tributaries of the upper Esopus Creek, Ulster County, New York, from 2009 to 2015. This report summarizes the density, biomass, and size structure of rainbow trout ( Oncorhynchus mykiss ) and brown trout ( Salmo trutta ) populations from the 2015 surveys along with data from the preceding 6 years. The mean density of rainbow trout populations in 2015 was 98 fish per 0.1 hectare, which was the highest value observed since 2010, and the mean biomass of rainbow trout populations in 2015 was 864 grams per 0.1 hectare, which was the highest value observed since 2012.

New York↗

USGS2019

Effects of water temperature, turbidity, and rainbow trout on humpback chub population dynamics

Humpback chub ( Gila cypha Miller 1946), found only in the Colorado River Basin, was one of the first species to be given full protection under the Endangered Species Act of 1973. Habitat alterations, such as changes in flow and water temperature caused by dams, and the introduction of nonnative fish have contributed to population declines in humpback chub and other native fish. These habitat alterations provide ideal conditions for the nonnative sport fish, rainbow trout ( Oncorhynchus mykiss Walbaum 1792). Managers have long sought to balance recovery of humpback chub with a viable rainbow trout fishery. However, finding this balance requires understanding how environmental conditions and rainbow trout have affected humpback chub populations. Recent findings indicate that the Colorado River can be managed for rainbow trout while maintaining a healthy humpback chub population in Grand Canyon National Park.

Arizona↗

USGS2008

Assessing the feasibility of native fish reintroductions: a framework and example applied to bull trout in the Clackamas River, Oregon

In a species conservation context, translocations can be an important tool, but they frequently fail to successfully establish new populations. We consider the case of reintroductions for bull trout (Salvelinus confluentus), a federally-listed threatened species with a widespread but declining distribution in western North America. Our specific objectives in this work were to: 1) develop a general framework for assessing the feasibility of reintroduction for bull trout, 2) provide a detailed example of implementing this framework to assess the feasibility of reintroducing bull trout in the Clackamas River, Oregon, and 3) discuss the implications of this effort in the more general context of fish reintroductions as a conservation tool. Review of several case histories and our assessment of the Clackamas River suggest that an attempt to reintroduce bull trout could be successful, assuming adequate resources are committed to the subsequent stages of implementation, monitoring, and evaluation.

Open-File Report↗

USGS2009

Bull Trout Forage Investigations in Beulah Reservoir, Oregon - Annual Report for 2006

Beulah Reservoir on the north fork of the Malheur River in northeastern Oregon provides irrigation water to nearby farms and ranches and supports an adfluvial population of bull trout (Salvelinus confluentus), which are listed as threatened under the Endangered Species Act. Water management in Beulah Reservoir results in seasonal and annual fluctuations of water volume that may affect forage availability for bull trout. Because no minimum pool requirements currently exist, the reservoir is occasionally reduced to run-of-river levels, which may decimate forage fish populations and ultimately affect bull trout. We sampled fish and aquatic insects in Beulah Reservoir in the spring, before the annual drawdown of 2006, and afterward, in the late fall. We also collected samples 1.5 years after the reservoir was dewatered for three consecutive summers. Overall, the moderate drawdown of 2006 (32 percent of full pool) did not drastically alter the fish community in Beulah Reservoir. We did document, however, decreases in abundance and sizes of chironomids in areas of the reservoir that were frequently dewatered, increased catch rates of fish with gillnets, and decreases in population estimates for smaller fishes after drawdown. In 2006, after the dewaterings of 2002-04, species composition was similar to that prior to the dewaterings, but the size distributions of most species were biased toward small juvenile or subyearling fishes and larger fishes were rare. Our results indicate that repeated reservoir drawdown reduces aquatic insect forage for bull trout and probably affects forage fish populations at least temporarily. The high catch rates of juvenile fishes 1.5 years after consecutive dewaterings suggests good reproductive success for any remaining adult fish, and shows that the fish community in Beulah Reservoir is resilient to such disturbances. There is, however, a period of time after serious drawdowns before significant numbers of juvenile fishes start to appear in the reservoir. Because Beulah Reservoir experiences a wide variety of drawdown scenarios in consecutive years, the forage fish community may never reach a state of equilibrium.

Open-File Report↗

USGS2010

Sequence analysis of the internal transcribed spacer (ITS) region reveals a novel clade of Ichthyophonus sp. from rainbow trout

The mesomycetozoean parasite Ichthyophonus hoferi is most commonly associated with marine fish hosts but also occurs in some components of the freshwater rainbow trout Oncorhynchus mykiss aquaculture industry in Idaho, USA. It is not certain how the parasite was introduced into rainbow trout culture, but it might have been associated with the historical practice of feeding raw, ground common carp Cyprinus carpio that were caught by commercial fisherman. Here, we report a major genetic division between west coast freshwater and marine isolates of Ichthyophonus hoferi. Sequence differences were not detected in 2 regions of the highly conserved small subunit (18S) rDNA gene; however, nucleotide variation was seen in internal transcribed spacer loci (ITS1 and ITS2), both within and among the isolates. Intra-isolate variation ranged from 2.4 to 7.6 nucleotides over a region consisting of ~740 bp. Majority consensus sequences from marine/anadromous hosts differed in only 0 to 3 nucleotides (99.6 to 100% nucleotide identity), while those derived from freshwater rainbow trout had no nucleotide substitutions relative to each other. However, the consensus sequences between isolates from freshwater rainbow trout and those from marine/anadromous hosts differed in 13 to 16 nucleotides (97.8 to 98.2% nucleotide identity).

Diseases of Aquatic Organisms↗

USGS2015

Genetic variation underlying resistance to infectious hematopoietic necrosis virus in a steelhead trout ( Oncorhynchus mykiss ) population

Understanding the mechanisms of host resistance to pathogens will allow insights into the response of wild populations to the emergence of new pathogens. Infectious hematopoietic necrosis virus (IHNV) is endemic to the Pacific Northwest and infectious to Pacific salmon and trout ( Oncorhynchus spp.). Emergence of the M genogroup of IHNV in steelhead trout O. mykiss in the coastal streams of Washington State, between 2007 and 2011, was geographically heterogeneous. Differences in host resistance due to genetic change were hypothesized to be a factor influencing the IHNV emergence patterns. For example, juvenile steelhead trout losses at the Quinault National Fish Hatchery (QNFH) were much lower than those at a nearby facility that cultures a stock originally derived from the same source population. Using a classical quantitative genetic approach, we determined the potential for the QNFH steelhead trout population to respond to selection caused by the pathogen, by estimating the heritability for 2 traits indicative of IHNV resistance, mortality ( h 2 = 0.377 (0.226 - 0.550)) and days to death ( h 2 = 0.093 (0.018 - 0.203)). These results confirm that there is a genetic basis for resistance and that this population has the potential to adapt to IHNV. Additionally, genetic correlation between days to death and fish length suggests a correlated response in these traits to selection. Reduction of genetic variation, as well as the presence or absence of resistant alleles, could affect the ability of populations to adapt to the pathogen. Identification of the genetic basis for IHNV resistance could allow the assessment of the susceptibility of other steelhead populations.

Diseases of Aquatic Organisms↗

USGS2025

Assessing fish growth changes under an ecosystem regime shift: The approach of linear mixed-effects modeling with application to Lake Huron lake trout

Linear mixed-effects modeling has been used to characterize fish growth changes over time, but early studies did not fully consider the implicit relationship among the three major factors of fish age, year-class, and sampling year in model development. Our objective is to resolve this issue and develop a linear mixed-effects model to clearly assess how lake trout ( Salvelinus namaycush ) growth has responded to the ecosystem regime shift in Lake Huron. We found that, from the late 1970s through the early 2000s, lake trout weight-at-age in northern Lake Huron had large variation with no apparent temporal trend, whereas the weight-at-age in southern Lake Huron steadily declined but remained larger than that in northern Lake Huron. The difference between northern and southern Lake Huron almost disappeared prior to the 2003 collapse of alewives, which accelerated the weight-at-age declines during the 2000s in both regions. By 2010, lake trout growth had a modest recovery and then stabilized. Our model fitted and explained variation in lake trout weight-at-age between years, regions, and recruitment origins, with the fixed age effect representing the general growth trajectory, the fixed year effect as the year-specific growth index, and the random year-class effect as the cohort-specific growth index.

Lake Huron↗

USGS2011

Adaptive management of bull trout populations in the Lemhi Basin

The bull trout Salvelinus confluentus , a stream-living salmonid distributed in drainages of the northwestern United States, is listed as threatened under the Endangered Species Act because of rangewide declines. One proposed recovery action is the reconnection of tributaries in the Lemhi Basin. Past water use policies in this core area disconnected headwater spawning sites from downstream habitat and have led to the loss of migratory life history forms. We developed an adaptive management framework to analyze which types of streams should be prioritized for reconnection under a proposed Habitat Conservation Plan. We developed a Stochastic Dynamic Program that identified optimal policies over time under four different assumptions about the nature of the migratory behavior and the effects of brook trout Salvelinus fontinalis on subpopulations of bull trout. In general, given the current state of the system and the uncertainties about the dynamics, the optimal policy would be to connect streams that are currently occupied by bull trout. We also estimated the value of information as the difference between absolute certainty about which of our four assumptions were correct, and a model averaged optimization assuming no knowledge. Overall there is little to be gained by learning about the dynamics of the system in its current state, although in other parts of the state space reducing uncertainties about the system would be very valuable. We also conducted a sensitivity analysis; the optimal decision at the current state does not change even when parameter values are changed up to 75% of the baseline values. Overall, the exercise demonstrates that it is possible to apply adaptive management principles to threatened and endangered species, but logistical and data availability constraints make detailed analyses difficult.

Lemhi River Basin↗

USGS2015

Effects of gill-net trauma, barotrauma, and deep release on postrelease mortality of Lake Trout

Unaccounted postrelease mortality violates assumptions of many fisheries studies, thereby biasing parameter estimates and reducing efficiency. We evaluated effects of gill-net trauma, barotrauma, and deep-release treatment on postrelease mortality of lake trout Salvelinus namaycush . Lake trout were captured at depths up to 65 m with gill nets in Priest Lake, Idaho, and held in a large enclosure for 10–12 d. Postrelease mortality was the same for surface-release–and deep-release–treated fish (41%). Mixed-effects logistic regression models were used to evaluate effects of intrinsic and environmental factors on the probability of mortality. Presence of gill-net trauma and degree of barotrauma were associated with increased probability of postrelease mortality. Smaller fish were also more likely to suffer postrelease mortality. On average, deep-release treatment did not reduce postrelease mortality, but effectiveness of treatment increased with fish length. Of the environmental factors evaluated, only elapsed time between lifting the first and last anchors of a gill-net gang (i.e., lift time) was significantly related to postrelease mortality. Longer lift times, which may allow ascending lake trout to acclimate to depressurization, were associated with lower postrelease mortality rates. Our study suggests that postrelease mortality may be higher than previously assumed for lake trout because mortality continues after 48 h. In future studies, postrelease mortality could be reduced by increasing gill-net lift times and increasing mesh size used to increase length of fish captured.

Idaho↗

USGS2018

Rearing performance of juvenile brown trout Salmo trutta fed a bioprocessed soybean meal diet with differing velocity regimes

This 121-day experiment evaluated the rearing performance of brown trout Salmo trutta fed one of two isonitrogenous and isocaloric diets (46% protein, 16% lipid) and reared at velocities of either 2.8 or 16.1 cm/s. Fishmeal was the primary protein source for the reference diet, which was compared to a bioprocessed soybean meal ingredient that replaced approximately 67% of the fishmeal in the experimental diet. At the end of the experiment, there were no significant differences in gain, percent gain, feed conversion rates, nor specific growth rates between the dietary treatments. There were also no significant differences in intestinal morphology, splenosomatic, hepatosomatic, and viscerosomatic indices related to diet composition. However, gain, percent gain, feed fed, and specific growth rate were all significantly greater in brown trout reared at the higher velocity. No significant differences in any of the other variables measured were observed between the velocity treatments. There were no significant interactions between diet and velocity in any of the variables. Based on the results of this study, bioprocessed soybean meal can replace at least 67% of the fish meal in brown trout diets, regardless of the rearing velocities used in this study. Higher rearing velocities are recommended to maximize juvenile brown trout growth rates.

Open Journal of Animal Sciences↗

USGS1953

Movement of tagged lake trout in Lake Superior, 1950-1952

A total of 733 native lake trout was tagged at two widely separated localities in Lake Superior; subsequent recaptures numbered 155 fish (21.1 percent) during the year following marking. In October 1950, 116 large lake trout (average total length, 27.3 inches) were tagged near Keweenaw Point, Michigan. Fifteen (12.9 percent) were recovered during the first year at points as far west as the Gooseberry River, Minnesota (190 miles), north to the Slate Islands, Ontario (95 miles), and east to Grand Marais, Michigan (100 miles). Nine fish (7.8 percent) were recovered during the second year after marking. Returns from 617 tagged lake trout of smaller size released in the Apostle Island region of Wisconsin during the period June 12 to August 6, 1951, numbered 140 (22.7 percent) during the first year. Of these fish, 90 percent were recaptured within a radius of 50 miles of the point of release. Seventy-six percent were caught in Wisconsin, 14 percent in Minnesota, and 9 percent in Michigan waters. The fish retaken in Michigan had moved 120 to 255 miles between the time of release and recapture, traveling as far east as Grand Marais. Lake trout recaptured at distances of more than 50 miles from the tagging locality were of larger average size than marked fish caught within this radius.

The Fisherman↗

USGS1994

Life-history organization of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in Yellowstone Lake

Life-history organization of the cutthroat trout (Oncorhynchus clarki) may be viewed at various levels, including species, subspecies, metapopulation, population, or individual. Each level varies in spatial scale and temporal persistence, and components at each level continually change with changes in environment. Cutthroat trout are widely distributed throughout the western United States, occurring in such diverse environments as coastal rivers of the Pacific Northwest and interior streams of the Great Basin. During its evolution the species has organized into 14 subspecies with many different life-history characteristics and habitat requirements. Within subspecies, organization is equally complex. For example, life-history traits, such as average size and age, migration strategy, and migration timing, vary among individual spawning populations of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in tributary streams of Yellowstone Lake. Understanding the effects of human perturbations on life-history organization is critical for management of the cutthroat trout and other polytypic salmonid species. Loss of diversity at any hierarchical level jeopardizes the long-term ability of the species to adapt to changing environments, and it may also lead to increased fluctuations in abundance and yield and increase the risk of extinction.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS1992

Surficial substrates and bathymetry of five historical lake trout spawning reefs in near-shore waters of the Great Lakes

The reestablishment of self-sustaining stocks of lake trout (Salvelinus namaycush) in the lower four Great Lakes has been substantially impeded because planted fish do not produce enough progeny that survive and reproduce. The causes for this failure are unknown, but many historical spawning sites of lake trout have been degraded by human activities and can no longer produce viable swim-up fry. In this study, we used side-scan sonar and an underwater video camera to survey, map, and evaluate the sustainability of one reef in each of the five Great Lakes for lake trout spawning and fry production. At four of the reef sites, we found good-to-excellent substrate for spawning and fry production by the shallow-water strains of lake trout that are now being planted. These substrates were in water 6-22 m deep and were composed largely of rounded or angular rubble and cobble. Interstitial spaces in these substrates were 20 cm or deeper and would protect naturally spawned eggs and fry from predators, ice scour, and buffeting by waves and currents. Subsequent studies of egg survival by other researchers confirmed our evaluation that the best substrates at two of these sites still have the potential to produce viable swim-up fry.

Technical Report↗

USGS1981

Comparative hatchability of lake trout eggs differing in contaminant burden and incubation conditions

In 1972, fertilized eggs of lake trout ( Salvelinus namaycush ) from the Marquette (Michigan) State Fish Hatchery (where levels of contaminants are relatively low) and eggs from lake trout collected in Michigan waters of Lake Michigan near Saugatuck and Charlevoix (where levels of PCB's and DDE are elevated) were incubated at hatchery temperatures (6° C) and at temperatures simulating the natural temperature cycle of Lake Michigan (1-8° C). Survival to yolk absorption of larvae from these three sources ranged from 40.3 to 65.5%, and no correlation was observed between survival and the level of PCB's and DDE in the eggs. Additional studies in 1975 with lake trout eggs from the same three sources confirmed previous observations that the elevated levels of PCB's and DDE in eggs from Lake Michigan did not appear to affect the percent hatch of lake trout eggs or survival of the fry to the swim-up stage. When fry hatched from eggs with an elevated contaminant burden were starved for several weeks, we observed no abnormal increase in posthatching mortality during the period when the yolk stores were being consumed.

Technical Paper↗

USGS1981

Vulnerability of young lake trout to predation after chronic exposure to PCB's and DDE

The vulnerability of fry of Lake Michigan lake trout (Salvelinus namaycush) to predation by rainbow trout (Salmo gairdneri) was tested after the fry had been exposed to PCB's, DDE, and a combination of these contaminants in both water and food at concentrations corresponding to ambient levels (1X) in water and plankton in Lake Michigan and at levels 5 and 25 times higher. Vulnerability of the fry, measured as the ratio of escapes to predator attacks, was not significantly increased by either 90 or 165 days of exposure to the contaminants at any of the concentrations tested, and no behavioral differences were observed between control and exposed fry in their reaction to predators. Exposure to PCB's and DDE at environmental and higher concentrations thus did not affect the vulnerability of lake trout fry to predation. This observation suggests that the failure of lake trout reproduction in Lake Michigan was not caused by contaminant-induced reductions in the ability of the fry to escape predators.

Book chapter↗

USGS1981

Biochemistry and metabolism of lake trout: laboratory and field studies on the effects of contaminants

To evaluate the effects of ambient and higher concentrations of PCB's (Aroclor 1254) and DDE in food and water on fry of lake trout ( Salvelinus namaycush ) from Lake Michigan, I measured several biochemical indicators of stress in exposed and unexposed (control) fry. No differences between treatments were observed in oxygen consumption rates or lactate concentrations of unexercised fry, but apparent differences in specific swimming speed and lactate response in fry that swam to exhaustion suggested that exposed fry had lower stamina. Observed differences between biochemical profiles of 1-day-old sac fry reared from eggs originating from lake trout collected off Saugatuck and those originating from eggs of brood stock at the Marquette (Michigan) hatchery may have been caused by organochlorine contamination or by genetic and dietary differences between the parental stocks. Activity of the enzyme allantoinase was measured in juvenile and adult lake trout as an indicator of sublethal effects of Great Lakes contaminants. The 50% inhibition of allantoinase in vitro occurred at 6.0 mg/L Cu++, 6.7 mg/L Cd++, 34 mg/L Hg++, and 52 mg/L Pb++. Allantoinase was not affected by in vitro exposure to PCB's up to 7 μg/g, or DDE or DDT up to 10 μg/g; however, in vivo exposure resulting in 2.6 μg/g PCB's in the whole fish activated allantoinase slightly (10% significance level). Allantoinase activity was negatively correlated with total length for fish from Lake Michigan but not for fish from Lake Superior or from laboratory stocks. Mercury, PCB's, and DDT, possibly acting in combination with each other and with additional contaminants, may be the cause of the negative correlation of allantoinase activity with size in Lake Michigan lake trout.

Book chapter↗

USGS1974

Toxicity of formalin, malachite green, and the mixture to four life stages of rainbow trout

Formalin, malachite green, or a mixture of them are utilized in fish culture for control of external parasites of fish and control of fungus on fish and fish eggs. Very little information is available concerning the toxicity of these compounds to fish under laboratory test conditions or the differences in sensitivity to these chemicals at various life stages. This study was designed to 1) determine the toxicity of formalin, malachite green and the mixture to four life stages of rainbow trout (Salmo gairdneri) under various laboratory test conditions, 2) determine the degradation of formalin and malachite green in water, 3) determine the effect of additive toxicity, and 4) determine the differences in sensitivity of two different lots of eggs to the chemicals. The 96-hour LC50 (lethal concentration required to produce 50% mortality) for formalin against rainbow trout in soft water ranged from 580 micrograms/liter for the eyed egg stage to 134 micrograms/liter for the fingerling stage. The 96-hour LC50 for malachite green against rainbow trout in soft water ranged from 2.00 mg/L for the eyed egg stage to 0.0224 mg/L for the fingerling stage. The additive indices for formalin and malachite green when applied in combination show strictly additive toxicity as the ranges overlap zero in all tests. Deactivation indices for formalin and malachite green show essentially no change in toxicity of the solutions to rainbow trout when aged for periods of 1, 2, and 3 weeks.

Thesis↗