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At least 685 records · Page 38Linked to original sources

USGS2006

Linkages between nutrients and assemblages of macroinvertebrates and fish in wadeable streams: Implication to nutrient criteria development

We sampled 240 wadeable streams across Wisconsin for different forms of phosphorus and nitrogen, and assemblages of macroinvertebrates and fish to (1) examine how macroinvertebrate and fish measures correlated with the nutrients; (2) quantify relationships between key biological measures and nutrient forms to identify potential threshold levels of nutrients to support nutrient criteria development; and (3) evaluate the importance of nutrients in influencing biological assemblages relative to other physicochemical factors at different spatial scales. Twenty-three of the 35 fish and 18 of the 26 macroinvertebrate measures significantly correlated (P < 0.05) with at least one nutrient measure. Percentages of carnivorous, intolerant, and omnivorous fishes, index of biotic integrity, and salmonid abundance were fish measures correlated with the most nutrient measures and had the highest correlation coefficients. Percentages of Ephemeroptera-Plecoptera-Trichoptera individuals and taxa, Hilsenhoff biotic index, and mean tolerance value were macroinvertebrate measures that most strongly correlated with the most nutrient measures. Selected biological measures showed clear trends toward degradation as concentrations of phosphorus and nitrogen increased, and some measures showed clear thresholds where biological measures changed drastically with small changes in nutrient concentrations. Our selected environmental factors explained 54% of the variation in the fish assemblages. Of this explained variance, 46% was attributed to catchment and instream habitat, 15% to nutrients, 3% to other water quality measures, and 36% to the interactions among all the environmental variables. Selected environmental factors explained 53% of the variation in macroinvertebrate assemblages. Of this explained variance, 42% was attributed to catchment and instream habitat, 22% to nutrients, 5% to other water quality measures, and 32% to the interactions among all the environmental variables. ?? 2006 Springer Science+Business Media, Inc.

Environmental Management↗

USGS2001

Simulated limnological effects of the Shasta Lake temperature control device

We estimated the effects of a temperature control device (TCD) on a suite of thermodynamic and limnological attributes for a large storage reservoir, Shasta Lake, in northern California. Shasta Dam was constructed in 1945 with a fixed-elevation penstock. The TCD was installed in 1997 to improve downstream temperatures for endangered salmonids by releasing epilimnetic waters in the winter/spring and hypolimnetic waters in the summer/fall. We calibrated a two-dimensional hydrodynamic reservoir water quality model, CE-QUAL-W2, and applied a structured design-of-experiment simulation procedure to predict the principal limnological effects of the TCD under a variety of environmental scenarios. Calibration goodness-of-fit ranged from good to poor depending on the constituent simulated, with an R 2 of 0.9 for water temperature but 0.3 for phytoplankton. Although the chemical and thermal characteristics of the discharge changed markedly, the reservoir's characteristics remained relatively unchanged. Simulations showed the TCD causing an earlier onset and shorter duration of summer stratification, but no dramatic affect on Shasta's nutrient composition. Peak in-reservoir phytoplankton production may begin earlier and be stronger in the fall with the TCD, while outfall phytoplankton concentrations may be much greater in the spring. Many model predictions differed from our a priori expectations that had been shaped by an intensive, but limited-duration, data collection effort. Hydrologic and meteorological variables, most notably reservoir carryover storage at the beginning of the calendar year, influenced model predictions much more strongly than the TCD. Model results indicate that greater control over reservoir limnology and release quality may be gained by carefully managing reservoir volume through the year than with the TCD alone.

Environmental Management↗

USGS1999

Metabolic rates in an anadromous clupeid, the American shad ( Alosa sapidissima )

To assess the energetics of migration in an anadromous fish, adult American shad ( Alosa sapidissima ) were swum in a large respirometer at a range of speeds (1.0–2.3 body lengths (BL) s −1 , 13–24 °C). Metabolic rate (M O2 ) was logarithmically related to swimming speed (Bl s −1 ; r 2 = 0.41, slope = 0.23 ± 0.037) and tailbeat frequency (beats × min −1 ; r 2 = 0.52, slope = 0.003 ± 0.0003). Temperature had a significant effect on metabolic rate ( r 2 = 0.41) with a Q 10 of 2.2. Standard metabolic rate (SMR), determined directly after immobilization with the neuroblocker gallamine triethiodide, ranged from 2.2–6.2 mmolO 2 kg −1 h −1 and scaled with mass (W) such that SMR = 4.0 (±0.03)W 0.695(±0.15) . Comparison of directly determined and extrapolated SMR suggests that swimming respirometry provides a good estimate of SMR in this species, given the differences in basal activity monitored by the two methods. Overall, American shad metabolic rates (M O2 and SMR) were intermediate between salmonids and fast-swimming perciforms, including tunas, and may be a result of evolutionary adaptation to their active pelagic, schooling life history. This study demonstrates variability in metabolic strategy among anadromous fishes that may be important to understanding the relative success of different migratory species under varying environmental conditions.

Journal of Comparative Physiology B: Biochemical, ↗

USGS2001

Association of amphibians with attenuation of ultraviolet-b radiation in montane ponds

Ambient ultraviolet-b (UV-B) radiation (280–320 nm) has increased at north-temperate latitudes in the last two decades. UV-B can be detrimental to amphibians, and amphibians have shown declines in some areas during this same period. We documented the distribution of amphibians and salmonids in 42 remote, subalpine and alpine ponds in Olympic National Park, Washington, United States. We inferred relative exposure of amphibian habitats to UV-B by estimating the transmission of 305- and 320-nm radiation in pond water. We found breeding Ambystoma gracile , A. macrodactylum and Rana cascadae at 33%, 31%, and 45% of the study sites, respectively. Most R. cascadae bred in fishless shallow ponds with relatively low transmission of UV-B. The relationship with UV-B exposure remained marginally significant even after the presence of fish was included in the model. At 50 cm water depth, there was a 55% reduction in incident 305-nm radiation at sites where breeding populations of R. cascadae were detected compared to other sites. We did not detect associations between UV-B transmission and A. gracile or A. macrodactylum . Our field surveys do not provide evidence for decline of R. cascadae in Olympic National Park as has been documented in Northern California, but are consistent with the hypothesis that the spatial distribution of R. cascadae breeding sites is influenced by exposure to UV-B. Substrate or pond depth could also be related to the distribution of R. cascadae in Olympic National Park.

Oecologia↗

USGS2001

The introduction of nonnative fish into wilderness lakes: Good intentions, conflicting mandates, and unintended consequences

Because they have the potential to provide the best remaining standards of relatively unmodified landscapes, protected areas in North America (such as wilderness areas and national parks) have tremendous ecological and scientific value (Cole and Landres 1996). Although the montane ecosystems of western North America are particularly well represented in this complex of protected lands, aquatic habitats within these protected areas are often subject to management practices that are inconsistent with the goal of maintaining natural processes. The most prevalent of these practices is the introduction of salmonid fishes (such as trout) into historically fishless ecosystems to create recreational fisheries.

Ecosystems↗

USGS2019

Bridging the gap between salmon spawner abundance and marine nutrient assimilation by juvenile salmon: Seasonal cycles and landscape effects at the watershed scale

Anadromous Pacific salmon are semelparous, and resource subsidies from spawning adults (marine-derived nutrients, or MDN) benefit juvenile salmonids rearing in freshwater. However, it remains unclear how MDN assimilation relates to spawner abundance within a watershed. To address this, we examined seasonal, watershed-scale patterns of MDN assimilation in rearing coho ( Oncorhynchus kisutch ) and Chinook ( O. tshawytscha ) salmon and compared it with spawner biomass and landscape features in a western Alaska watershed with contrasting structural complexity in two sub-drainages. Adult salmon biomass density was estimated from escapement and spawner distribution data, and MDN assimilation in juvenile salmon was estimated via stable isotopes. In the North River, MDN assimilation was lowest in early summer, prior to annual spawning migrations, increased after spawning, and peaked in late winter. In the more complex mainstem Unalakleet River, MDN assimilation was higher but varied minimally from summer through fall before increasing in late fall and winter. Summer MDN assimilation, prior to salmon spawning, was primarily a function of habitat complexity, where MDN was highest in sloughs and the more complex mainstem river. After salmon spawned, fall MDN assimilation was a function of adult pink and Chinook salmon biomass as well as MDN assimilation that occurred prior to spawning (that is, summer MDN), but unrelated to total summer biomass (all salmon species biomass combined). Thus, MDN assimilation by juvenile salmon in the fall was a function of species-specific adult spawner abundance but seasonal patterns of MDN assimilation were masked in complex habitat where summer MDN assimilation remained high.

Alaska↗

USGS2024

The past, present, and a future for native charr in Japan

Charrs ( Salvelinus ) reach their southernmost distribution in Japan, and are uniquely adapted to the short, steep streams of this island archipelago. Southern Asian Dolly Varden ( Salvelinus curilus ) occur only in Hokkaido Island, whereas white-spotted charr ( Salvelinus leucomaenis ) range to southern Honshu. Both species diverged from an ancestral lineage during the late Pliocene/early Pleistocene, when lowered sea levels created semi-enclosed water bodies in the seas of Japan and Okhotsk. Genetic analyses showed S. curilus represents the most ancient divergence from the Dolly Varden ( Salvelinus malma ) - Arctic charr ( Salvelinus alpinus ) group, and revealed five lineages of S. leucomaenis which align differently than traditional subspecies. Japanese charr display diverse and flexible life histories including anadromous fish with partial migration, and fluvial, adfluvial, and resident forms. In Hokkaido, Dolly Varden are distributed upstream and white-spotted charr downstream. They coexist in narrow sympatric zones through adaptive shifts by Dolly Varden in behavior and morphology that facilitate benthic foraging. Both species hybridize with native and nonnative salmonids, and are displaced from microhabitats and decline in abundance when rainbow trout ( Oncorhynchus mykiss ) and brown trout ( Salmo trutta ) invade. Japan streams contain over 95,000 erosion control dams which create short stream fragments (medians ~200 m). This has increased extirpation of charr populations via lower genetic diversity and stochastic and demographic factors. Tributaries provide complex rearing habitats, afford refuges from floods, and supply recruits that sustain populations in mainstem fragments and create metapopulations in connected riverscapes. Charr play central roles in linked stream-riparian food webs, and cause direct and indirect effects that cascade to streambed algae and riparian predators when linkages are disrupted by anthropogenic effects or altered by native parasites. Many charr populations are threatened by habitat fragmentation and introgression or invasion by nonnative forms, but efforts to conserve charr are growing. These include restoring connectivity among pure populations above barriers that prevent invasions, protecting tributary nurseries, and instituting angling regulations to protect headwater populations. Key steps include inventorying pure populations, identifying conservation units, selecting appropriate management based on connectivity and biotic interactions, and engaging stakeholders and youth to engender an ethic for conserving irreplaceable charr lineages.

Ichthyological Research↗

USGS2023

Contemporary distribution of non-native Chinook salmon (Oncorhynchus tshawytscha) in South America

Chinook salmon represent one of the most successful salmonid introductions in South America, and today multiple naturalized populations exist across Patagonia. Here, we present an updated regional distribution of Chinook salmon that includes new records of occurrences collected between 2006 and 2022. We found a significant range expansion in terms of occurrences for adult (18 new basins; 2,854,108 km 2 ) and adult spawners or juvenile (12 new basins; 53,262 km 2 ) salmon extending both to the north and south of the previously known colonized range in South America. This range expansion (38% of the area considering only occurrences indicating reproduction via adult spawners or juvenile salmon) included major basins draining to both the Pacific Ocean and Atlantic Ocean coasts of the continent. Adult Chinook salmon are currently reported from 48 large basins (33.62°–54.97° S) covering a total drainage area of 3,047,197 km 2 . The observed expansion we document here has been likely driven by the dispersal of straying adults from historically naturalized populations. Our findings provide evidence that the invasion of Chinook salmon in South America is ongoing and updated information relevant to the management of this invasive and socio-ecologically important fish.

Biological Invasions↗

USGS2013

The effects of increased stream temperatures on juvenile steelhead growth in the Yakima River Basin based on projected climate change scenarios

Stakeholders within the Yakima River Basin expressed concern over impacts of climate change on mid-Columbia River steelhead ( Oncorhynchus mykiss ) , listed under the Endangered Species Act. We used a bioenergetics model to assess the impacts of changing stream temperatures—resulting from different climate change scenarios—on growth of juvenile steelhead in the Yakima River Basin. We used diet and fish size data from fieldwork in a bioenergetics model and integrated baseline and projected stream temperatures from down-scaled air temperature climate modeling into our analysis. The stream temperature models predicted that daily mean temperatures of salmonid-rearing streams in the basin could increase by 1–2°C and our bioenergetics simulations indicated that such increases could enhance the growth of steelhead in the spring, but reduce it during the summer. However, differences in growth rates of fish living under different climate change scenarios were minor, ranging from about 1–5%. Because our analysis focused mostly on the growth responses of steelhead to changes in stream temperatures, further work is needed to fully understand the potential impacts of climate change. Studies should include evaluating changing stream flows on fish activity and energy budgets, responses of aquatic insects to climate change, and integration of bioenergetics, population dynamics, and habitat responses to climate change.

Washington↗

USGS2013

Identifying stakeholder-relevant climate change impacts: a case study in the Yakima River Basin, Washington, USA

Designing climate-related research so that study results will be useful to natural resource managers is a unique challenge. While decision makers increasingly recognize the need to consider climate change in their resource management plans, and climate scientists recognize the importance of providing locally-relevant climate data and projections, there often remains a gap between management needs and the information that is available or is being collected. We used decision analysis concepts to bring decision-maker and stakeholder perspectives into the applied research planning process. In 2009 we initiated a series of studies on the impacts of climate change in the Yakima River Basin (YRB) with a four-day stakeholder workshop, bringing together managers, stakeholders, and scientists to develop an integrated conceptual model of climate change and climate change impacts in the YRB. The conceptual model development highlighted areas of uncertainty that limit the understanding of the potential impacts of climate change and decision alternatives by those who will be most directly affected by those changes, and pointed to areas where additional study and engagement of stakeholders would be beneficial. The workshop and resulting conceptual model highlighted the importance of numerous different outcomes to stakeholders in the basin, including social and economic outcomes that go beyond the physical and biological outcomes typically reported in climate impacts studies. Subsequent studies addressed several of those areas of uncertainty, including changes in water temperatures, habitat quality, and bioenergetics of salmonid populations.

Washington↗

USGS2005

Effects of biotic and abiotic factors on the distribution of trout and salmon along a longitudinal stream gradient

We examined the influence of biotic and abiotic factors on the distribution, abundance, and condition of salmonid fishes along a stream gradient. We observed a longitudinal change in fish distribution with native cutthroat trout, Oncorhynchus clarki utah, and introduced brown trout, Salmo trutta, demonstrating a distinct pattern of allopatry. Cutthroat trout dominated high elevation reaches, while reaches at lower elevations were dominated by brown trout. A transition zone between these populations was associated with lower total trout abundance, consistent changes in temperature and discharge, and differences in dietary preference. Variation in cutthroat trout abundance was best explained by a model including the abundance of brown trout and diel temperature, whereas variation in brown trout abundance was best explained by a model including the abundance of cutthroat trout and discharge. These results suggest the potential for condition-mediated competition between the two species. The results from our study can aid biologists in prioritizing conservation activities and in developing robust management strategies for cutthroat trout. ?? Springer 2005.

Environmental Biology of Fishes↗

USGS2011

Migration of Sakhalin taimen (Parahucho perryi): Evidence of freshwater resident life history types

Sakhalin taimen ( Parahucho perryi ) range from the Russian Far East mainland along the Sea of Japan coast, and Sakhalin, Kuril, and Hokkaido Islands and are considered to primarily be an anadromous species. We used otolith strontium-to-calcium ratios (Sr/Ca) to determine the chronology of migration between freshwater and saltwater and identify migratory contingents of taimen collected from the Koppi River, Russia. In addition, we examined taimen from the Sarufutsu River, Japan and Tumnin River, Russia that were captured in marine waters. Transects of otolith Sr/Ca for the Sarufutsu River fish were consistent with patterns observed in anadromous salmonids. Two fish from the Tumnin River appeared to be recent migrants to saltwater and one fish was characterized by an otolith Sr/Ca transect consistent with marine migration. Using these transects as benchmarks, all Koppi River taimen were classified as freshwater residents. These findings suggest more work is needed to assess life history variability among locations and the role of freshwater productivity in controlling migratory behavior in taimen.

Tumnin River, Koppi River, Sarufutsu River↗

USGS2012

Assessment of juvenile coho salmon movement and behavior in relation to rehabilitation efforts in the Trinity River, California, using PIT tags and radiotelemetry

Coho salmon ( Oncorhynchus kisutch ) of the Southern Oregon/Northern California Coast (SONCC) Evolutionarily Significant Unit (ESU) is federally listed as a threatened species. The Trinity River Restoration Program (TRRP) is rehabilitating the Trinity River to restore coho salmon (coho) and other salmonid populations. In order to evaluate the program’s actions, several studies of movements and behavior of coho in the Trinity River were conducted from 2006 to 2009, including snorkel surveys and mark-recapture techniques based on Passive Integrated Transponder (PIT) tags, elastomer tags, and radio transmitters. Catch, recapture, and condition of natural sub-yearlings, along with site fidelity and emigration of hatchery-reared yearlings in rehabilitated and reference habitats, were studied. Location was important because coho were absent from the lower controlled and rehabilitated sites most of the time. However, rehabilitation did not have a significant effect on natural coho salmon at the site level. Apparent survival of radio-tagged, hatchery-reared yearling coho released downstream from Lewiston Dam was much lower in the first 10 km downstream from the release site than in other areas between Lewiston Dam and the Klamath River estuary. Estimated survival of yearling hatchery coho salmon per 100 km down to Blake’s Riffle was estimated at 64 % over the distance of the 239 km study area. Migration primarily occurred at night in the upper Trinity River; however, as yearlings moved through the lower Trinity River towards the Klamath River, estuary nocturnal migration became less. Apparent survival was generally lowest in areas upstream from the North Fork of the Trinity River.

California↗

USGS2016

Feeding periodicity, diet composition, and food consumption of subyearling rainbow trout in winter

Although winter is a critically important period for stream salmonids, aspects of the ecology of several species are poorly understood. Consequently, we examined the diel feeding ecology of subyearling rainbow trout ( Oncorhynchus mykiss ) during winter in a central New York stream. Rainbow trout diet was significantly different during each 4-h interval and also differed from the drift and benthos. Feeding was significantly greater during darkness (i.e. 20:00 h – 04:00 h) than during daylight hours (i.e. 08:00 h – 16:00 h), peaking at 20:00 h. Daily food consumption (1.9 mg) and daily ration (3.4 %) during winter were substantially lower than previously reported for subyearling rainbow trout in the same stream during summer. These findings provide important new insights into the winter feeding ecology of juvenile rainbow trout in streams.

New York↗

USGS2023

Linked foraging and bioenergetics modeling may inform fish parasite infection dynamics

The parasitic copepod Salmincola californiensis infects Pacific salmon and trout ( Oncorhynchus spp.) and often reaches high prevalence and intensity in reservoirs compared to stream systems. Recent research indicates that temperature plays a fundamental role in copepod development and fish susceptibility. Here, we expand a linked foraging and bioenergetics model to simulate infection risk. Based on juvenile salmon vertical migration patterns, we add estimates of copepod generations produced and thermal strata metrics that appear associated with copepodid aggregations and increased infection. Severe damage on hosts may be caused by the infectious copepodid, a life-stage not readily visible and thus not detectable using traditional fish screenings. We discuss model limitations, opportunities for future research, and the potential for inclusion of copepod expansion equations to existing linked bioenergetics models or observed behaviors of salmonids in other lentic systems. We demonstrate that using a temperature sensitive model framework that includes copepod infection dynamics is useful in interpreting other lines of evidence, such as fish mortality estimates. Collectively, our work provides a testable framework for future comparisons of infection potential and demonstrates how bioenergetics models may be useful in understanding host–parasite interactions.

Environmental Biology of Fishes↗

USGS2024

Using parentage-based tagging to estimate survival of Chinook salmon fry in a large storage reservoir

Research efforts focusing on salmonid populations have highlighted the need to better understand demographic parameters for the fry and parr life stages. Monitoring these small fish presents a challenge because negative effects from handling and tagging can bias subsequent parameter estimates. Removal models and associated sampling designs represent one class of mark-recapture models with potential to be applied to very small juvenile salmon, yet existing methods associated with removal studies are not well-suited for all study environments. For example, populations residing in large storage reservoirs may yield low capture probabilities when subjected to removal sampling, making unbiased estimation of survival using traditional removal models difficult. To address this limitation, we developed a sampling design and associated model using parentage-based tagging in hatchery-raised juvenile Chinook salmon ( Oncorhynchus tshawytscha ) to estimate survival over a 2-year study period in a large storage reservoir in western Oregon, USA. Individual fish were identified to family groups, serving as replicate batch marks in a robust design removal model framework. Results from a simulation suggested that parameter estimates were unbiased even at very low capture probabilities, although the use of model constraints (i.e., covariates or constant parameter values) was necessary to achieve this. Model fitting to field data supported a trend in survival over time, with survival increasing with time since release in the first study year but decreasing in the second.

Environmental Biology of Fishes↗

USGS2013

Histological assessment of organs in sexually mature and post-spawning steelhead trout and insights into iteroparity

Steelhead trout ( Oncorhynchus mykiss ) are anadromous and iteroparous, but repeat-spawning rates are generally low. Like other anadromous salmonids, steelhead trout fast during freshwater spawning migrations, but little is known about the changes that occur in vital organs and tissues. We hypothesized that fish capable of repeat-spawning would not undergo the same irreversible degeneration and cellular necrosis documented in semelparous salmon. Using Snake River steelhead trout as a model we used histological analysis to assess the cellular architecture in the pyloric stomach, ovary, liver, and spleen in sexually mature and kelt steelhead trout. We observed 38 % of emigrating kelts with food or fecal material in the gastrointestinal tract. Evidence of feeding was more likely in good condition kelts, and feeding was associated with a significant renewal of villi in the pyloric stomach. No vitellogenic oocytes were observed in sections of kelt ovaries, but perinucleolar and early/late stage cortical alveolus oocytes were present suggesting iteroparity was possible. We documented a negative correlation between the quantity of perinucleolar oocytes in ovarian tissues and fork length of kelts suggesting that larger steelhead trout may invest more into a single spawning event. Liver and spleen tissues of both mature and kelt steelhead trout had minimal cellular necroses. Our findings indicate that the physiological processes causing rapid senescence and death in semelparous salmon are not evident in steelhead trout, and recovery begins in fresh water. Future management efforts to increase iteroparity in steelhead trout and Atlantic salmon must consider the physiological processes that influence post-spawning recovery.

Reviews in Fish Biology and Fisheries↗

USGS2007

Developing acute-to-chronic toxicity ratios for lead, cadmium, and zinc using rainbow trout, a mayfly, and a midge

In order to estimate acute-to-chronic toxicity ratios (ACRs) relevant to a coldwater stream community, we exposed rainbow trout (Oncorhynchus mykiss) to cadmium (Cd), lead (Pb), and zinc (Zn) in 96-h acute and 60+ day early-life stage (ELS) exposures. We also tested the acute and sublethal responses of a mayfly (Baetis tricaudatus) and a midge (Chironomus dilutus, formerly C. tentans) with Pb. We examine the statistical interpretation of test endpoints and the acute-to-chronic ratio concept. Increasing the number of control replicates by 2 to 3x decreased the minimum detectable differences by almost half. Pb ACR estimates mostly increased with increasing acute resistance of the organisms (rainbow trout ACRs <??? mayfly < Chironomus). The choice of test endpoint and statistical analysis influenced ACR estimates by up to a factor of four. When calculated using the geometric means of the no- and lowest-observed effect concentrations, ACRs with rainbow trout and Cd were 0.6 and 0.95; Zn about 1.0; and for Pb 3.3 and 11. The comparable Pb ACRs for the mayfly and Chironomus were 5.2 and 51 respectively. Our rainbow trout ACRs with Pb were about 5-20x lower than earlier reports with salmonids. We suggest discounting previous ACR results that used larger and older fish in their acute tests. ?? 2007 GovernmentEmployee: U.S. Geological Survey.

Water, Air, & Soil Pollution↗