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At least 685 records · Page 38Linked to original sources
USGS2012

Corpus Christi, Nueces, and Aransas Bays: Chapter C in Emergent wetlands status and trends in the northern Gulf of Mexico: 1950-2010

Corpus Christi Bay and Nueces Bay comprise the middle estuarine portion of Texas’ Coastal Bend region (Figure 1; Burgan and Engle, 2006). Aransas Bay is part of the upper estuarine portion of the region. These bays make up part of the Coastal Bend Bays and Estuaries Program, one of the many estuarine areas in the U.S. Environmental Protection Agency’s National Estuary Program (Holt, 1998). The Coastal Bend region is sub-humid and sub-tropical. Summers are long, hot, and humid, and winters are short and mild. The landscape around the estuaries is dominated by row crops, pastures, and brushy rangeland (Handley and others, 2007). The Nueces River, along with other smaller rivers and creeks, provides freshwater inflow - along with essential nutrients and sediment - into Nueces Bay, which feeds into Corpus Christi Bay (Holt, 1998). Freshwater inflow into the Aransas Bay comes from Mission River, Aransas River, and Copano Creek. The region is relatively dry otherwise and prone to droughts. Corpus Christi receives an average of 76.2 cm (30 in) of rain annually; evaporation usually exceeds 177.8 cm (70 in) (Holt, 1998; Handley and others, 2007). The San Antonio-Nueces Coastal Basin drains into Aransas Bay. The Nueces River basin covers 43,253 km 2 (16,700 miles 2 ), from northwest of San Antonio, flowing southeast to where it drains into Nueces and Corpus Christi Bays (Holt, 1998). The Nueces-Rio Grande basin covers approximately 18,648 km 2 (7,200 miles 2 ) and flows partially into Corpus Christi Bay (as well as the upper Laguna Madre). The inflow from Nueces River has declined by approximately 20 percent over the past several decades, partly due to construction of lakes and reservoirs, particularly Lake Corpus Christi and Choke Canyon reservoir. The Corpus Christi Estuary receives approximately 35 percent of the total freshwater inflow of 1,480,178,205 cubic meters (m 3 ) (1.2 million acre-feet) in the region; the Aransas Estuary receives about 53 percent. Tidal range is only 0.46 m (1.5 ft) on the Gulf shoreline and 0.15 m (0.5 ft) in Nueces Bay. Strong winds are the primary force behind water circulation in the Coastal Bend estuaries.

Texas↗
USGS1988

Phytoplankton growth rates in a light-limited environment, San Francisco Bay

Phytoplankton cells reside in a turbulent medium partitioned into an upper photic zone that sustains photosynthesis, and a lower aphotic zone that does not. In estuaries, vertical mixing rates between these 2 zones can be rapid (< 1 generation time) because of tidal stirring and because the mixing depth is generally shallow. Moreover, the photic depth is characteristically shallow in estuaries because of the high seston concentrations that typify these systems (e.g. Cloern 1987). Hence the mean light exposure of phytoplankton cells, and their rates of photosynthesis and growth in estuaries, should be related to the ratio of photic depth Z p to mixing Z m , (defined as either the water column depth, or the surface layer depth in a stratified estuary). Grobbelar (1985) has measured phytoplankton production in turbid waters and used the ratio Z p :Z m as a simple index to quantify the degree of light limitation. Harris and his colleagues have examined in detail the importance of the Z p :Z m ratio in lakes for influencing variability of phytoplankton production and photosynthetic parameters (Harris et al. 1980), and variability of species composition both temporally (Harris & Piccinin 1980) and spatially (Haffner et al. 1980). Phytoplankton growth rates have only rarely been measured in estuaries (Malone 1977, Furnas 1982, Harding et al. 1986) where cycling rates between the photic and aphotic zones can be much faster than in lakes or the open ocean. This study was motivated by the need for quantitative measures of phytoplankton population growth rate in an estuarine environment, and was designed around the presumption that growth rates can be related empirically to light exposure. We conducted the study in San Francisco Bay (California, USA), which has large horizontal gradients in light availability (Z p :Z m ) typical of many coastal plain estuaries, and nutrient concentrations that often exceed those presumed to limit phytoplankton growth (Cloern et al. 1985). We tested the hypothesis that light availability is the primary control of phytoplankton growth, and that previous estimates of growth rate based on the ratio of productivity to biomass (Cloern et al. 1985) are realistic. Specifically, we wanted to verify that growth rate varies spatially along horizontal gradients of light availability indexed as Z p :Z m , such that phytoplankton turnover rate is rapid in shallow clear areas (high Z p :Z m ) and slow in deep turbid areas (low Z p :Z m ). We used an in situ incubation technique which simulated vertical mixing, and measured both changes in cell number and carbon production as independent estimates of growth rate across a range of Z p :Z m ratios.

California↗
USGS2001

Pesticides associated with suspended sediments entering San Francisco Bay following the first major storm of water year 1996

Estuaries receive large quantities of suspended sediments following the first major storm of the water year. The first-flush events transport the majority of suspended sediments in any given year, and because of their relative freshness in the hydrologic system, these sediments may carry a significant amount of the sediment-associated pesticide load transported into estuaries. To characterize sediment-associated pesticides during a first-flush event, water and suspended sediment samples were collected at the head of the San Francisco Bay during the peak in suspended sediment concentration that followed the first major storm of the 1996 hydrologic year. Samples were analyzed for a variety of parameters as well as 19 pesticides and degradation products that span a wide range of hydrophobicity. Tidal mixing at the head of the estuary mixed relatively fresh suspended sediment transported down the rivers with suspended sediments in estuary waters. Segregation of the samples into groups with similar degrees of mixing between river and estuary water revealed that transport of suspended sediments from the Sacramento-San Joaquin drainage basin strongly influenced the concentration and distribution of sediment-associated pesticides entering the San Francisco Bay. The less-mixed suspended sediment contained a different distribution of pesticides than the sediments exposed to greater mixing. Temporal trends were evident in pesticide content after samples were segregated according to mixing history. These results indicate sampling strategies that collect at a low frequency or do not compare samples with similar mixing histories will not elucidate basin processes. Despite the considerable influence of mixing, a large number of pesticides were found associated with the suspended sediments. Few pesticides were found in the concurrent water samples and in concentrations much lower than predicted from equilibrium partitioning between the aqueous and sedimentary phases. The observed sediment-associated pesticide concentrations may reflect disequilibria between sedimentary and aqueous phases resulting from long equilibration times at locations where pesticides were applied, and relatively short transit times over which re-equilibration may occur.

Estuaries↗
USGS1985

Environmental setting of San Francisco Bay

San Francisco Bay, the largest bay on the California coast, is a broad, shallow, turbid estuary comprising two geographically and hydrologically distinct subestuaries: the northern reach lying between the connection to the Pacific Ocean at the Golden Gate and the confluence of the Sacramento-San Joaquin River system, and the southern reach (herein called South Bay) between the Golden Gate and the southern terminus of the bay. The northern reach is a partially mixed estuary dominated by seasonally varying river inflow, and the South Bay is a tidally oscillating lagoon-type estuary. Freshwater inflows, highest during winter, generate strong estuarine circulation and largely determine water residence times. They also bring large volumes of dissolved and particulate materials to the estuary. Tidal currents, generated by mixed semidiurnal and diurnal tides, mix the water column and, together with river inflow and basin geometry, determine circulation patterns. Winds, which are strongest during summer and during winter storms, exert stress on the bay's water surface, thereby creating large waves that resuspend sediment from the shallow bay bottom and, together with the tidal currents, contribute markedly to the transport of water masses throughout the shallow estuary. ?? 1985 Dr W. Junk Publishers.

Hydrobiologia↗
USGS1985

Time scales of change in the San Francisco Bay benthos

Results from multi-year investigations in the San Francisco Bay estuary show that large abundance fluctuations within benthic macroinvertebrate populations reflect both (1) within-year periodicity of reproduction, recruitment, and mortality that is not necessarily coincident with seasonal changes of the environment (e.g., the annual temperature cycle), and (2) aperiodic density changes (often larger than within-year fluctuations) following random perturbations of the environment. Density peaks of the small, short-lived estuarine invertebrates that comprise the vast majority of individuals in the bay's relatively homogeneous benthic community normally occur between spring and autumn depending on the species, in large part a reflection of reproductive periodicity. However, because mild winters permit reproductive activity in some of the common species throughout much of the year, other factors are important to within-year density fluctuations in the community. Seasonally predictable changes in freshwater inflow, wind and tidal mixing, microalgal biomass, and sediment erosion/deposition patterns all contribute to observed seasonal changes in abundance. For example, the commonly observed decline in abundance during winter reflects both short-lived species that die after reproducing and the stress of winter conditions (e.g., inundation by less saline, sediment-laden water and the decline in both planktonic and benthic algal biomass - a direct source of food for the shallow-water benthos). On the other hand, data from several studies suggest that observed 'recruitment' and 'mortality' may in fact be the migration of juveniles and adults to and from study sites. For example, the common amphipod Ampelisca abdita apparently moves from shallow to deep water, or from up-estuary to down-estuary locations, coincident with periods of high river runoff in winter. Growth of individuals within the few studied species populations is also highly seasonal, and appears to be coincident with seasonal increases in the abundance of planktonic and/or benthic microalgae. Two multi-year studies have shown that, in addition to within-year periodicity, major restructuring of the benthic community can occur as a result of anomalous (usually climate-related) perturbations of the benthic habitat. For example, during wet years freshwater-intolerant species disappear from the upper part of the estuary and from shallow areas of the bay. During a two-year drought these same species colonized the extreme upper end of the estuary in large numbers. Other aperiodic perturbations include localized instances of sediment erosion or deposition and algal mat accumulations that greatly depress abundance. Additionally, there is evidence (observations that the clam Macoma balthica establishes large populations only when the amphipod A. abdita is not abundant) that species interactions can contribute greatly to interannual variations. Thus, while community composition may change little over the long term, year-to-year predictability of species abundances is low. ?? 1985 Dr W. Junk Publishers.

Hydrobiologia↗
USGS2006

Patterns of fish use and piscivore abundance within a reconnected saltmarsh impoundment in the northern Indian River Lagoon, Florida

Nearly all saltmarshes in east-central, Florida were impounded for mosquito control during the 1960s. The majority of these marshes have since been reconnected to the estuary by culverts, providing an opportunity to effectively measure exchange of aquatic organisms. A multi-gear approach was used monthly to simultaneously estimate fish standing stock (cast net), fish exchange with the estuary (culvert traps), and piscivore abundance (gill nets and bird counts) to document patterns of fish use in a reconnected saltmarsh impoundment. Changes in saltmarsh fish abundance, and exchange of fish with the estuary reflected the seasonal pattern of marsh flooding in the northern Indian River Lagoon system. During a 6-month period of marsh flooding, resident fish had continuous access to the marsh surface. Large piscivorous fish regularly entered the impoundment via creeks and ditches to prey upon small resident fish, and piscivorous birds aggregated following major fish movements to the marsh surface or to deep habitats. As water levels receded in winter, saltmarsh fish concentrated into deep habitats and emigration to the estuary ensued (200% greater biomass left the impoundment than entered). Fish abundance and community structure along the estuary shoreline (although fringed with marsh vegetation) were not analogous to marsh creeks and ditches. Perimeter ditches provided deep-water habitat for large estuarine predators, and shallow creeks served as an alternative habitat for resident fish when the marsh surface was dry. Use of the impoundment as nursery by transients was limited to Mugil cephalus Linnaeus, but large juvenile and adult piscivorous fish used the impoundment for feeding. In conclusion, the saltmarsh impoundment was a feeding site for piscivorous fish and birds, and functioned as a net exporter of forage fish to adjacent estuarine waters. ?? Springer 2006.

Wetlands Ecology and Management↗
USGS2026

Changes in suspended sediment concentration along tidal rivers of the Chesapeake Bay: The tidal freshwater “sediment shadow”

Transport of terrigenic sediment from nontidal watersheds into estuaries has important impacts on coastal habitat quality, pollutant transport, and resilience to sea-level rise. However, relatively little is known about changes in suspended sediment as nontidal rivers encounter tide, transition into tidal rivers through the tidal freshwater zone (TFZ), and enter saline portions of estuaries. The goal of this paper is to identify spatial and temporal patterns in suspended sediment concentration (SS) changes across tidal and salinity gradients over multiple tidal rivers, using a robust monitoring long-term dataset from the Chesapeake Bay. The multiple TFZs in the Chesapeake Bay consistently have a “sediment shadow” shown by a local spatial minimum in SS compared to upstream nontidal and downgradient oligohaline river reaches. Similarly, freshwater inputs from nontidal rivers have diminishing influence on tidal SS temporal dynamics with distance downstream from the head-of-tide. Therefore, little of the contemporary watershed sediment load is likely transported past the TFZ except during extreme floods when some sediment may be delivered to saline portions of the estuary. Tidal freshwater and brackish portions of the estuary have spatially variable trends in SS over time, both increases and decreases. However, the more saline downstream ends of tidal rivers and the mainstem of the Chesapeake Bay have had a consistent average 25% decline in SS over the past decades. In summary, the presence of “sediment shadows” suggests watershed loads of sediment are currently mostly not transported through the TFZ into the saline estuary, and likely generate sediment deficits for tidal freshwater wetlands.

Delaware, Maryland, Pennsylvania↗
USGS2017

Rare earth element behavior during groundwater – seawater mixing along the Kona Coast of Hawaii

Groundwater and seawater samples were collected from nearshore wells and offshore along the Kona Coast of the Big Island of Hawaii to investigate rare earth element (REE) behavior in local subterranean estuaries. Previous investigations showed that submarine groundwater discharge (SGD) is the predominant flux of terrestrial waters to the coastal ocean along the arid Kona Coast of Hawaii. Groundwater and seawater samples were filtered through 0.45 μm and 0.02 μm pore-size filters to evaluate the importance of colloidal and soluble (i.e., truly dissolved ionic species and/or low molecular weight [LMW] colloids) fractions of the REEs in the local subterranean estuaries. Mixing experiments using groundwater collected immediately down gradient from a wastewater treatment facility (WWTF) proximal to the Kaloko-Hanokohau National Historic Park, and more “pristine” groundwater from a well constructed in a lava tube at Kiholo Bay, were mixed with local seawater to study the effect of solution composition (i.e., pH, salinity) on the concentrations and fractionation behavior of the REEs as groundwater mixes with seawater in Kona Coast subterranean estuaries. The mixed waters were also filtered through 0.45 or 0.02 μm filters to ascertain the behavior of colloidal and soluble fractions of the REEs across the salinity gradient in each mixing experiment. Concentrations of the REEs were statistically identical (two-tailed Student t -test, 95% confidence) between the sequentially filtered sample aliquots, indicating that the REEs occur as dissolved ionic species and/or LMW colloids in Kona Coast groundwaters. The mixing experiments revealed that the REEs are released to solution from suspended particles or colloids when Kona Coast groundwater waters mix with local seawater. The order of release that accompanies increasing pH and salinity follows light REE (LREE) > middle REE (MREE) > heavy REE (HREE). Release of REEs in the mixing experiments is driven by decreases in the free metal ion activity in solution and the concomitant increase in the amount of each REE that occurs in solution as dicarbonato complexes [i.e., Ln(CO 3 ) 2 - ] as pH increases across the salinity gradient. Input-normalized REE patterns of Kona Coast groundwater and coastal seawater are nearly identical and relatively flat compared to North Pacific seawater, indicating that SGD is the chief source of these trace elements to the ocean along the Kona Coast. Additionally, REE concentrations of the coastal seawater are between 10 and 50 times higher than previously reported open-ocean seawater values from the North Pacific, further demonstrating the importance of SGD fluxes of REEs to these coastal waters. Taken together, these observations indicate that large-scale removal of REEs, which characterizes the behavior of REEs in the low salinity reaches of many surface estuaries, is not a feature of the subterranean estuary along the Kona Coast. A large positive gadolinium (Gd) anomaly characterizes groundwater from the vicinity of the WWTF. The positive Gd anomaly can be traced to the coastal ocean, providing further evidence of the impact of SGD on the coastal waters. Estimates of the SGD fluxes of the REEs to the coastal ocean along the Kona Coast (i.e., 1.3 – 2.6 mmol Nd day -1 ) are similar to recent estimates of SGD fluxes of REEs along Florida’s east coast and to Rhode Island Sound, all of which points to the importance of SGD as significant flux of REEs to the coastal ocean.

Hawaii↗
USGS2024

Does the extent of glacial cover across watersheds and discharge periods affect dietary resource use of nearshore fishes in the Northern Gulf of Alaska?

Northern high-latitude glaciers impact nearshore marine ecosystems through the discharge of cold and fresh waters, including nutrients and organic matter. Fishes are important integrators of ecosystem processes and hold key positions in the transfer of energy to higher trophic positions in such systems. This study used a natural gradient in space and time, including watershed glacial cover (0–60%) of five adjacent estuaries and three sequential discharge periods (pre-peak, peak, post-peak) in the northern Gulf of Alaska (Kachemak Bay) to test whether differences in glacial cover of watersheds upstream of estuaries affect dietary resource use of nearshore fishes. Dietary resource use was assessed using stomach content and stable carbon and nitrogen isotope analyses to determine fish diet composition and trophic niche width. Crescent gunnel ( Pholis laeta ), a mostly sedentary species, was our focal species for comparisons across estuaries and discharge periods. Discharge period had a greater influence on diet composition and trophic niche width of crescent gunnels than watershed glacial coverage. Niche width of crescent gunnel was larger during the post-peak discharge period compared to pre-peak and peak periods, coincident with a shift in prey spectrum. However, watershed glacial cover was not a suitable predictor of niche width of crescent gunnel. Trophic resource use was also considered along this glacial cover gradient for two other fish species, Pacific staghorn sculpin ( Leptocottus armatus ) and starry flounder ( Platichthys stellatus ), but within the post-peak discharge period only. These species exploited a larger prey base compared to crescent gunnel, likely due to their greater mobility. Similar to crescent gunnel, there were no relationships in trophic niche width associated with watershed glacial coverage for these other species during the post-peak discharge period. Instead, trophic resource use of these three nearshore fish species was influenced by a more complex set of dynamic environmental variables (salinity, temperature, turbidity, and discharge), as well as static watershed characteristics, especially vegetation cover. Such drivers can act through changes in metabolic rates, modulating foraging strategies and trophic connectivity, as well as terrestrial nutrient delivery to support estuarine production. The environmental conditions associated with the glacially influenced estuaries during our study period (2020−2021) seemed within a range that allowed nearshore fishes to maintain energy pathways and prey bases across these estuaries, but it is unknown how these estuarine food webs may be influenced in years of extreme conditions such as during heat waves, droughts, or floods.

Alaska↗
USGS2013

Comparison of sediment supply to San Francisco Bay from watersheds draining the Bay Area and the Central Valley of California

Quantifying suspended sediment loads is important for managing the world's estuaries in the context of navigation, pollutant transport, wetland restoration, and coastal erosion. To address these needs, a comprehensive analysis was completed on sediment supply to San Francisco Bay from fluvial sources. Suspended sediment, optical backscatter, velocity data near the head of the estuary, and discharge data obtained from the output of a water balance model were used to generate continuous suspended sediment concentration records and compute loads to the Bay from the large Central Valley watershed. Sediment loads from small tributary watersheds around the Bay were determined using 235 station-years of suspended sediment data from 38 watershed locations, regression analysis, and simple modeling. Over 16 years, net annual suspended sediment load to the head of the estuary from its 154,000 km 2 Central Valley watershed varied from 0.13 to 2.58 (mean = 0.89) million metric t of suspended sediment, or an average yield of 11 metric t/km 2 /yr. Small tributaries, totaling 8145 km 2 , in the nine-county Bay Area discharged between 0.081 and 4.27 (mean = 1.39) million metric t with a mean yield of 212 metric t/km 2 /yr. The results indicate that the hundreds of urbanized and tectonically active tributaries adjacent to the Bay, which together account for just 5% of the total watershed area draining to the Bay and provide just 7% of the annual average fluvial flow, supply 61% of the suspended sediment. The small tributary loads are more variable (53-fold between years compared to 21-fold for the inland Central Valley rivers) and dominated fluvial sediment supply to the Bay during 10 out of 16 yr. If San Francisco Bay is typical of other estuaries in active tectonic or climatically variable coastal regimes, managers responsible for water quality, dredging and reusing sediment accumulating in shipping channels, or restoring wetlands in the world's estuaries may need to more carefully account for proximal small urbanized watersheds that may dominate sediment supply.

California↗
USGS2022

Defining oyster resource zones across coastal Louisiana for restoration and aquaculture

Eastern oysters ( Crassostrea virginica ) are a critical ecological and commercial resource in the northern Gulf of Mexico facing changing environmental conditions from river management and climate change. In Louisiana, USA, development of restored reefs, and off-bottom aquaculture would benefit from the identification of locations supportive of sustainable oyster populations ( i.e., metapopulations) and high consistent production. This study defines four oyster resource zones across coastal Louisiana based on environmental conditions known to affect oyster survival, growth, and reproduction. Daily data from 2015 to 2019 were interpolated to generate salinity and temperature profiles across Louisiana's estuaries, which were then used to classify zones based on monthly and annual salinity mean and variance. Zones were classified as supportive of (1) broodstock sanctuary reefs (i.e., support reproductive populations), (2) productive reefs during dry (salty) years, (3) productive reefs during wet (fresh) years, and (4) off-bottom aquaculture development. Of the 38,000 km 2 investigated, over 11,000 km 2 of potential oyster zone area was identified across the Louisiana coast. The Broodstock Sanctuary Zone was the smallest (∼540 km 2 ), as salinity variance limited this zone in many areas, as it is driven largely by riverine inputs across many estuaries. Located up-estuary (Dry Restoration Zone) and down-estuary (Wet Restoration Zone) of the Broodstock Sanctuary Zone, Dry and Wet Restoration Zone areas covered ∼2400 km 2 and ∼3900 km 2 , respectively. Mapped reefs in Louisiana currently exist largely within the Dry Restoration zones, suggesting a potential strategy to focus reef development in Wet Restoration zones to ensure reef network sustainability through years with high precipitation and river inflow. The off-bottom Aquaculture Zone was the largest (∼6400 km 2 ) zone identified, with much of this area located more down-estuary and off-shore. Accounting for variable water quality conditions enables the development of a network of reefs resilient to environmental variability, and more stable areas for consistent off-bottom aquaculture production. Spatial planning and identification of oyster resource zones reduces focus on individual reef success and supports management of oyster metapopulation outcomes, while identifying zones supportive of off-bottom aquaculture.

Louisiana↗
USGS2003

Spring hunting changes the regional movements of migrating greater snow geese

1. Human-induced disturbance such as hunting may influence the migratory behaviour of long-distance migrants. In 1999 and 2000 a spring hunt of greater snow geese Anser caerulescens atlanticus occurred for the first time in North America since 1916, aimed at stopping population growth to protect natural habitats. 2. We evaluated the impact of this hunt on the staging movements of geese along a 600-km stretch of the St Lawrence River in southern Quebec, Canada. 3. We tracked radio-tagged female geese in three contiguous regions of the staging area from the south-west to the north-east: Lake St Pierre, Upper Estuary and Lower Estuary, in spring 1997 (n = 37) and 1998 (n = 70) before the establishment of hunting , and in 1999 (n = 60) and 2000 (n = 59) during hunting . 4. We used multi-state capture-recapture models to estimate the movement probabilities of radio-tagged females among these regions. To assess disturbance level, we tracked geese during their feeding trips and estimated the probability of completing a foraging bout without being disturbed. 5. In the 2 years without hunting , migration was strongly unidirectional from the south-west to the north-east, with very low westward movement probabilities. Geese gradually moved from Lake St Pierre to Upper Estuary and then from Upper Estuary to Lower Estuary. 6. In contrast, during the 2 years with hunting westward movement was more than four times more likely than in preceding years. Most of these backward movements occurred shortly after the beginning of the hunt, indicating that geese moved back to regions where they had not previously experienced hunting . 7. Overall disturbance level increased in all regions in years with hunting relative to years without hunting . 8. Synthesis and applications. We conclude that spring hunting changed the stopover scheduling of this long-distance migrant and might further impact population dynamics by reducing prenuptial fattening. The spring hunt may also have increased crop damage. We propose that staggered hunt opening dates could attenuate secondary effects of such management actions.

Quebec↗
USGS2007

A cold phase of the East Pacific triggers new phytoplankton blooms in San Francisco Bay

Ecological observations sustained over decades often reveal abrupt changes in biological communities that signal altered ecosystem states. We report a large shift in the biological communities of San Francisco Bay, first detected as increasing phytoplankton biomass and occurrences of new seasonal blooms that began in 1999. This phytoplankton increase is paradoxical because it occurred in an era of decreasing wastewater nutrient inputs and reduced nitrogen and phosphorus concentrations, contrary to the guiding paradigm that algal biomass in estuaries increases in proportion to nutrient inputs from their watersheds. Coincidental changes included sharp declines in the abundance of bivalve mollusks, the key phytoplankton consumers in this estuary, and record high abundances of several bivalve predators: Bay shrimp, English sole, and Dungeness crab. The phytoplankton increase is consistent with a trophic cascade resulting from heightened predation on bivalves and suppression of their filtration control on phytoplankton growth. These community changes in San Francisco Bay across three trophic levels followed a state change in the California Current System characterized by increased upwelling intensity, amplified primary production, and strengthened southerly flows. These diagnostic features of the East Pacific "cold phase" lead to strong recruitment and immigration of juvenile flatfish and crustaceans into estuaries where they feed and develop. This study, built from three decades of observation, reveals a previously unrecognized mechanism of ocean-estuary connectivity. Interdecadal oceanic regime changes can propagate into estuaries, altering their community structure and efficiency of transforming land-derived nutrients into algal biomass.

California↗
USGS2008

Predictions for an invaded world: A strategy to predict the distribution of native and non-indigenous species at multiple scales

Habitat models can be used to predict the distributions of marine and estuarine non-indigenous species (NIS) over several spatial scales. At an estuary scale, our goal is to predict the estuaries most likely to be invaded, but at a habitat scale, the goal is to predict the specific locations within an estuary that are most vulnerable to invasion. As an initial step in evaluating several habitat models, model performance for a suite of benthic species with reasonably well-known distributions on the Pacific coast of the US needs to be compared. We discuss the utility of non-parametric multiplicative regression (NPMR) for predicting habitat- and estuary-scale distributions of native and NIS. NPMR incorporates interactions among variables, allows qualitative and categorical variables, and utilizes data on absence as well as presence. Preliminary results indicate that NPMR generally performs well at both spatial scales and that distributions of NIS are predicted as well as those of native species. For most species, latitude was the single best predictor, although similar model performance could be obtained at both spatial scales with combinations of other habitat variables. Errors of commission were more frequent at a habitat scale, with omission and commission errors approximately equal at an estuary scale. ?? 2008 International Council for the Exploration of the Sea. Published by Oxford Journals. All rights reserved.

Conference Paper↗
USGS2005

Using thermal-infrared imagery to delineate ground-water discharge

On March 8 and 9, 1992, a thermal-infrared-multispectral scanner (TIMS) was flown over two military ordnance disposal facilities at the Edgewood Area of Aberdeen Proving Ground, Maryland. The data, collected by the National Aeronautics and Space Administration, in cooperation with the U.S. Army and the U.S. Geological Survey, were used to locate ground-water discharge zones in surface water. The images from the flight show areas where ground-water discharge is concentrated, as well as areas of diffuse discharge. Concentrated discharge is predominant in isolated or nearly isolated ponds and creeks in the study area. Diffuse discharge is found near parts of the shoreline where the study area meets the surrounding estuaries of the Chesapeake Bay and the Gunpowder River. The average temperature for surface water, measured directly in the field, and the average temperature, calculated from atmospherically corrected TIMS images, was 10.6° C (Celsius) at the first of two sites. Potentiometric surface maps of both field sites show discharge toward the nontidal marshes, the estuaries which surround the field sites, and creeks which drain into the estuaries. The average measured temperature of ground water at both sites was 10.7° C. The calculated temperature from the TIMS imagery at both sites where ground-water discharge is concentrated within a surface-water body is 10.4° C. In the estuaries which surround the field sites, field measurements of temperature were made resulting in an average temperature of 9.0° C. The average calculated TIMS temperature from the estuaries was 9.3° C. Along the shoreline at the first site and within 40 to 80 meters of the western and southern shores of the second site, water was 1° to 2° C warmer than water more than 80 meters away. This pattern of warmer water grading to cooler water in an offshore direction could result from diffuse ground-water discharge. Tonal differences in the TIMS imagery could indicate changes in surface-water temperatures. These tonal differences can be interpreted to delineate the location and extent of ground-water discharge to bodies of surface water.

Groundwater↗
USGS1994

Stratigraphy of the Mississippi-Alabama shelf and the Mobile River incised-valley system

The Mobile River incised-valley system located in the northern Gulf of Mexico occupies an area from southern Alabama through Mobile Bay to the outer Mississippi-Alabama continental shelf. During the Wisconsinan regression, this incised-valley system was fluvially eroded and extended across the exposed shelf to a shelf-margin delta complex. The last postglacial transgression drowned the entrenched alluvial valleys and reworked the alluvial fill and estuarine deposits to form shoals on the middle shelf. As the postglacial transgression slowed. Mobile Bay was formed. Mobile Bay is a large estuarine system protected by barrier islands. This paper documents the late Quaternary history of the Mobile River incised valley and fill. Mobile Bay is a large (> 1000 km 2 ) microtidal estuary in southern Alabama that receives drainage through the Mobile River system. The Mobile River catchment is the fourth largest in the United States and terminates at the bayhead delta of Mobile Bay. The bay is a classic example of a wave-dominated, drowned, fluvial incised valley. During the middle-late Wisconsinan, glacial maximum, relative sea level was approximately 120 m lower than present. The Mobile River incised valley was a conduit for drainage from the catchment to the shelf margin. The sediment carried by the fluvial system during this lowstand passed through the Mobile River incised valley, across the exposed shelf and was deposited on the shelf margin as deltaic lobes. Rapid sea-level rise forced coastal-plain shorelines landward across the present mid-continental shelf. Transgression of the estuary mouth left a series of estuary-mouth-bar deposits that were reworked and overlie alluvial fill. These sand-rich deposits were submerged by the continuing transgression and reworked to form shoals As the Holocene sea-level rise slowed, the Mobile River incised valley became an estuarine depocenter. In the present alluvial valley, lowstand deposits are overlain by estuarine sediments deposited during the initial flooding of the valley and subsequent formation of Mobile Bay. During the present highstand, longshore sediment transport formed a spit across much of the bay mouth, creating a restricted estuary into which a bayhead delta has prograded. Late Holocene deposits in Mobile Bay consists predominantly or lagoonal sediments with bayhead-delta deposits encroaching into the northern end of the bay. The Holocene incised-valley fill (estuarine facies) underlying Mobile Buy fit well into the conceptual facies model of a microtidal wave-dominated estuary. The model does not fit as well, however, with the rapidly transgressed shelf portion of the incised valley. The down dip section does not contain a clearly identifiable (from seismic profiles) estuarine facies; the valley fill is primarily fluvial and is overlain by marine shoals. In the Mobile River incised valley, the distal portion of the valley was rapidly drowned, allowing the thin estuarine facies to be reworked. The proximal portion was drowned more slowly, leaving the estuarine facies intact. Thus, the single incised valley contains two very different types of fill.

Alabama↗
USGS1988

Catalog of worldwide tidal bore occurrences and characteristics

Documentation of tidal bore phenomena occurring throughout the world aids in defining the typical geographical setting of tidal bores and enables prediction of their occurrence in remote areas. Tidal bores are naturally occurring, tidally generated, solitary, moving water waves up to 6 meters in height that form upstream in estuaries with semidiurnal or nearly semidiurnal tide ranges exceeding 4 meters. Estuarine settings that have tidal bores typically include meandering fluvial systems with shallow gradients. Bores are well defined, having amplitudes greater than wind- or turbulence-caused waves, and may be undular or breaking. Formation of a bore is dependent on depth and velocity of the incoming tide and river outflow. Bores may occur in series (in several channels) or in succession (marking each tidal pulse). Tidal bores propagate up tidal estuaries a greater distance than the width of the estuary and most occur within 100 kilometers upstream of the estuary mouth. Because they are dynamic, bores cause difficulties in some shipping ports and are targets for eradication. Tidal bores are known to occur, or to have occurred in the recent past, in at least 67 localities in 16 countries at all latitudes, including every continent except Antarctica. Parts of Argentina, Canada, Central America, China, Mozambique, Madagascar, Northern Europe, North and South Korea, the United Kingdom, and the U.S.S.R. probably have additional undiscovered or unreported tidal bores. In Turnagain Arm estuary in Alaska, bores cause an abrupt increase in salinity, suspended sediment, surface character, and bottom pressure, a decrease in illumination of the water column, and a change in water temperature. Tidal bores occurring in Turnagain Arm, Alaska, have the

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USGS2006

Submarine ground-water discharge: nutrient loading and nitrogen transformations

Eutrophication of coastal waters due to nonpoint source land-derived nitrogen (N) loads is a worldwide phenomenon and perhaps the greatest agent of change altering coastal ecology (National Research Council, 2000; Howarth and others, 2000). Within the United States, a majority of estuaries have been determined to be moderately to severely impaired by eutrophication associated with increasing nutrient loads (Bricker and others, 1999). In coastal watersheds with soils of high hydraulic conductivity and permeable coastal sediments, ground water is a major route of transport of freshwater and its solutes from land to sea. Freshwater flowing downgradient from aquifers may either discharge from a seepage face near the intertidal zone, or flow directly into the sea as submarine ground-water discharge (SGD) (fig. 1). In the coastal aquifer, entrainment of saline pore water occurs prior to discharge, producing a gradient in ground-water salinity from land to sea, referred to as a subterranean estuary (Moore, 1999). In addition, processes including density-driven flow and tidal pumping create brackish and saline ground-water circulation. Hence, submarine ground-water discharge often consists of a substantial amount of recirculating seawater. Mixing of fresh and saline ground waters in the context of coastal sediments may alter the chemical composition of the discharging fluid. Depending on the biogeochemical setting, removal of fixed N due to processes leading to N 2 (dinitrogen gas) production in the nearshore aquifer and subterranean estuary may significantly attenuate land-derived N loads; or, processes such as ion exchange and tidal pumping in the subterranean estuary may substantially accelerate the transport of both land-derived and sediment re-mineralized N to estuarine water columns. As emphasized by Burnett and others (2001, 2002), a fundamental problem in evaluating the importance of ground-water discharge in marine geochemical budgets is the difficulty of collecting samples across the salinity gradients of coastal aquifers. In addition, locating and quantifying rates of submarine ground-water discharge remains a challenge due to the diffuse and spatially and temporally heterogeneous nature of discharge. As a result, with regard to the study of biogeochemical cycles and chemical loads to coastal waters, the seepage face and subterranean estuary are relatively new and under-studied zones in the aquatic cascade from watershed to sea. Processes occurring in those zones must be understood and considered for proper modeling and management of coastal water resources.

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