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At least 685 records · Page 38Linked to original sources
USGS2022

South Carolina and Landsat

South Carolina, the eighth State admitted to the union, transcends its size with its deep, rich history; striking beauty; vast natural resources; and extensive cultural diversity. Home to part of the Blue Ridge Mountains of the Central Appalachians, the Upstate is graced with more than 100 waterfalls, while the Lowcountry borders the Atlantic Ocean with 187 miles of coastline and 35 barrier islands. Forests cover two-thirds of the State, and forestry and agriculture together, as agribusiness, make up South Carolina’s leading industry. Two historic crops—cotton and tobacco—still rank in the top 10 commodities, though corn and soybeans now rank higher. Poultry, cattle, peanuts, and flowers also make the list. South Carolina’s population totals more than five million. Other residents include a variety of wildlife, bird, reptile, and fish species, including Ursus americanus (black bears), Alligator mississippiensis (American alligators), and Tursiops truncatus (bottlenose dolphins). More than 100 tree species also reside in South Carolina, which pays homage to one with its “The Palmetto State” nickname. South Carolina’s subtropical climate, long coastline, and lower elevations make it highly susceptible to tornado and hurricane activity and coastal flooding. Projected sea-level rise is a growing concern. A view from space can help monitor and manage natural resources on the land and in rivers, marshes, and the coast. Landsat reveals not just what an area looks like now, but also insights from decades ago.

South Carolina↗
USGS2006

Vascular Plant and Vertebrate Inventory of Casa Grande Ruins National Monument

Executive Summary This report summarizes results of the first comprehensive biological inventory of Casa Grande Ruins National Monument (NM) in southern Arizona. Surveys at the monument were part of a larger effort to inventory vascular plants and vertebrates in eight National Park Service units in Arizona and New Mexico. In 2001 and 2002 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Casa Grande Ruins NM to document the presence, and in some cases relative abundance, of species. By using repeatable study designs and standardized field techniques, which included quantified survey effort, we produced inventories that can serve as the basis for a biological monitoring program. Of the National Park Service units in the region, no other has experienced as much recent ecological change as Casa Grande Ruins NM. Once situated in a large and biologically diverse mesquite bosque near the perennially flowing Gila River, the monument is now a patch of sparse desert vegetation surrounded by urban and commercial development that is rapidly replacing agriculture as the dominant land use in the area. Roads, highways, and canals surround the monument. Development, and its associated impacts, has important implications for the plants and animals that live in the monument. The plant species list is small and the distribution and number of non-native plants appears to be increasing. Terrestrial vertebrates are also being impacted by the changing landscape, which is increasing the isolation of these populations from nearby natural areas and thereby reducing the number of species at the monument. These observations are alarming and are based on our review of previous studies, our research in the monument, and our knowledge of the biogeography and ecology of the Sonoran Desert. Together, these data suggest that the monument has lost a significant portion of its historic complement of species and these changes will likely intensify as urbanization continues. Despite isolation of the monument from nearby natural areas, we recorded noteworthy species or observations for all taxonomic groups: * Plants: night-blooming cereus * Amphibians: high abundance of Couch's spadefoot toads * Reptiles: high abundance of long-nosed snakes * Birds: 10 species of diurnal raptors including 4 species of falcons * Mammals: American badger This study is a first step in the process of compiling information about the biological resources of Casa Grande Ruins NM and surrounding areas. We recommend additional inventory and research studies, and we identify aspects of our effort that could be improved upon through application of new techniques or by extending the temporal (and possibly spatial) scope of our work.

Open-File Report↗
USGS2024

Genotypic clustering of H5N1 avian Influenza viruses in North America evaluated by ordination analysis

The introduction of HPAI H5N1 clade 2.3.4.4b viruses to North America in late 2021 resulted in avian influenza outbreaks in poultry, mortality events in many wild bird species, and spillover into many mammalian species. Reassortment events with North American low pathogenic virus were identified as early as February 2022 and over 100 genotypes have been characterized. Such diversity increases the complexity and time required for monitoring virus evolution. Here, we performed ordination and clustering analyses on sequence data from H5N1 viruses identified in North America between January 2020 to December 2023 to visualize virus genotypic diversity in poultry and wildlife populations. Our results reveal that ordination and cluster-based approaches can complement traditional phylogenetic analyses specifically for the preliminary assignment of H5N1 viruses to genotypic groups or to identify novel genotypes. Our study expands current knowledge on genotype diversity of H5N1 viruses in North America and describes a rapid approach for early virus genotype assignment.

Viruses↗
USGS1975

The role of indigenous wild, semidomestic, and exotic birds in the epizootiology of velogenic viscerotropic Newcastle disease in southern California, 1972-1973

During an epornitic of velogenic viscerotropic Newcastle disease (VVND) in southern California, free-flying wild birds, captive and free-ranging semidomestic birds, and exotic birds were collected from the quarantine area to determine their role in the epizootiology of the disease. The VVND virus was isolated from 0.04% of 9,446 free-flying wild birds, 0.76% of 4,367 semidomestic birds, and 1.01% of 3,780 exotic birds examined. Three house sparrows and 1 crow directly associated with infected poultry flocks were the only free-flying wild birds from which VVND virus was isolated. Among semidomestic species, ducks, quail, chukars, pheasants, peafowl, pigeons, and doves were found to be infected. Psittacines, pittas, and toucans accounted for 92% of the VVND virus isolations from exotic birds. In addition, domestic Newcastle disease virus (NDV) was isolated from 0.29% of the free-flying wild birds, from 1.65% of the semidomestic birds, and from 0.19% of the exotic birds collected. Hemagglutination-inhibition against domestic NDV was demonstrated in 0.24% of 3,796 wild bird serums, 8.28% of 2,004 semidomestic bird serums, and 3.90% of 231 exotic bird serums tested.Although few free-flying wild birds were infected with VVND virus in this epornitic, the isolation of domestic NDV strains from free-flying wild ducks and mourning doves suggests the potential for transportation of NDV over long distances by migratory birds.

Journal of the American Veterinary Medical Associa↗
USGS2011

Bridging the conservation design and delivery gap for wetland bird habitat maintenance and restoration in the Midwestern United States

The U.S. Fish and Wildlife Service's adoption of Strategic Habitat Conservation is intended to increase the effectiveness and efficiency of conservation delivery by targeting effort in areas where biological benefits are greatest. Conservation funding has not often been allocated in accordance with explicit biological endpoints, and the gap between conservation design (the identification of conservation priority areas) and delivery needs to be bridged to better meet conservation goals for multiple species and landscapes. We introduce a regional prioritization scheme for North American Wetlands Conservation Act funding which explicitly addresses Midwest regional goals for wetland-dependent birds. We developed decision-support maps to guide conservation of breeding and non-breeding wetland bird habitat. This exercise suggested ~55% of the Midwest consists of potential wetland bird habitat, and areas suited for maintenance (protection) were distinguished from those most suited to restoration. Areas with greater maintenance focus were identified for central Minnesota, southeastern Wisconsin, the Upper Mississippi and Illinois rivers, and the shore of western Lake Erie and Saginaw Bay. The shores of Lakes Michigan and Superior accommodated fewer waterbird species overall, but were also important for wetland bird habitat maintenance. Abundant areas suited for wetland restoration occurred in agricultural regions of central Illinois, western Iowa, and northern Indiana and Ohio. Use of this prioritization scheme can increase effectiveness, efficiency, transparency, and credibility to land and water conservation efforts for wetland birds in the Midwestern United States.

Midwest↗
USGS1978

Status and nesting of the yellow-billed cuckoo in Puerto Rico

Knowledge of the status of the Yellow-billed Cuckoo ( Coccyzus americanus ) in the Greater Antilles has been clouded by the bird's elusive behavior and spotty distribution on the islands, and by a major movement of North American migrants through the area to and from their wintering grounds in South America. Although Bond (1956) states that they breed in the Greater Antilles, nests are known only from Cuba, St. Croix (Bond 1956), and Jamaica (Lack 1976), and Bond considered the bird rare in Puerto Rico. Other students of Puerto Rican ornithology have suggested that the species is "uncommon" (Leopold 1963), "rare" (McCandless 1958), or a regular migrant or resident species (Wetmore 1916). Although no nests have been reported, most authors suspect that it breeds, and agree that it frequents coastal areas in western or southwestern Puerto Rico, primarily from May to September (Wetmore 1916, Danforth 1936, McCandless 1958, Leopold 1963, Biaggi 1970). From 1968 to 1971 we conducted linear strip censuses along pre-selected routes throughout the island, counting all birds heard or seen (Kepler and Kepler 1970); data we obtained on the Yellow-billed Cuckoo helped clarify and amplify existing information on its distribution and status.

The Auk↗
USGS2003

Measurements of thermal updraft intensity over complex terrain using American white pelicans and a simple boundary-layer forecast model

An examination of boundary-layer meteorological and avian aerodynamic theories suggests that soaring birds can be used to measure the magnitude of vertical air motions within the boundary layer. These theories are applied to obtain mixed-layer normalized thermal updraft intensity over both flat and complex terrain from the climb rates of soaring American white pelicans and from diagnostic boundary-layer model-produced estimates of the boundary-layer depth z i and the convective velocity scale w * . Comparison of the flatland data with the profiles of normalized updraft velocity obtained from previous studies reveals that the pelican-derived measurements of thermal updraft intensity are in close agreement with those obtained using traditional research aircraft and large eddy simulation (LES) in the height range of 0.2 to 0.8 z i . Given the success of this method, the profiles of thermal vertical velocity over the flatland and the nearby mountains are compared. This comparison shows that these profiles are statistically indistinguishable over this height range, indicating that the profile for thermal updraft intensity varies little over this sample of complex terrain. These observations support the findings of a recent LES study that explored the turbulent structure of the boundary layer using a range of terrain specifications. For terrain similar in scale to that encountered in this study, results of the LES suggest that the terrain caused less than an 11% variation in the standard deviation of vertical velocity.

Boundary-Layer Meteorology↗
USGS2013

Pacific island landbird monitoring annual report, National Park of American Samoa, Ta‘u and Tutuila units, 2011

The National Park of American Samoa (NPSA) was surveyed for landbirds and habitat characteristics from June through August, 2011. This information provides the first data in the time-series of landbird monitoring for long-term trends in forest bird distribution, density, and abundance within the NPSA. The NPSA survey area was comprised of the terrestrial portions of the Ta‘u and Tutuila Units. Each Unit was surveyed using point-transect distance sampling to estimate bird abundance. Sampling was conducted using a split-panel design where legacy transects are visited during each sampling occasion and newly, randomly located transects are visited only during one sampling occasion. This design optimizes trend detection while allowing for measuring and correcting for estimator bias. A total of 2,516 birds was detected from 13 species in both Units. All species were either endemic or indigenous to the islands of American Samoa. Numbers of detections ranged from 7 to 1,111. Nearly every species detected was broadly distributed in the predominantly native forests of NPSA. Sufficient detections were made of seven species, allowing for density estimation. Densities of species were higher in the Tutuila Unit; with the exception of the Wattled Honeyeater ( Foulehaio carunculata ), which was the most abundant species in both Units. The species occurred at nearly every station sampled and had densities much higher than the Samoan Starling ( Aplonis atrifusca ), Polynesian Starling ( Aplonis tabuensis ), and Collared Kingfisher ( Halcyon chloris ) which occurred in modest densities. The remaining species detected occurred at less than 20% of stations sampled and we were only able to determine the number of birds per station and percent occurrence. The White-rumped Swiftlet ( Aerodramus spodiopygius ) and Cardinal Honeyeater ( Myzomela cardinalis ) were detected in small numbers, but both species can be difficult to detect in closed canopy forests. The Purple Swamphen ( Porphyrio porphyrio ) and Banded Rail ( Gallirallus philippensis ) were most often detected in areas close to villages and agroforestry plantations. The Blue-crowned Lorikeet ( Vini australis ) and Fiji Shrikebill ( Clytorhynchus vitiensis ) only occur in the Manu‘a Island Group. The former was detected in most survey areas and the latter was patchily distributed in the Ta‘u Unit. The Many-colored Fruit-dove ( Ptilinopus perousii ), a species of concern, was detected in very small numbers in both Units. The Spotless Crake ( Porzana tabuensi ), which is extirpated on Tutuila Island, has been incidentally detected in small numbers on Ta‘u Island. However, the species was neither seen nor heard during this survey and remains a species of concern. NPSA canopy and understory composition was predominantly native, and trees formed a dense closed canopy at nearly 90% of the stations sampled. More than half of the tree heights in both units were taller than 5 m and the majority of slopes were steeper than 20 degrees. There were no clear dominant tree species in the mixed native forests. The most common tree species documented included Syzygium spp., Dysoxylum spp., Ficus spp., Hibiscus tiliaceus and Rhus taitensis (among others). There were significant differences in the distribution of bird densities between legacy and random transects. Determining differences in detection probabilities cannot be definitively assessed from a single survey. We recommend both panels be sampled in the future until bias in density and abundance can be evaluated, or if sampling may be reduced.

American Samoa;National Park Of American Samoa↗
USGS2021

Establishment of baseline cytology metrics in nestling American kestrels (Falco sparverius): Immunomodulatory effects of the flame retardant isopropylated triarylphosphate isomers

Avian populations must mount effective immune responses upon exposure to environmental stressors such as avian influenza and xenobiotics. Although multiple immune assays have been tested and applied to various avian species, antibody-mediated immune responses in non-model avian species are not commonly reported due to the lack of commercially available species-specific antibodies. The objectives of the present study were to advance methods for studying wild bird immune responses and to apply these to the evaluation of cytological responses after exposure of American kestrels, Falco sparverius, to a commercial flame retardant mixture containing isopropylated triarylphosphate isomers (ITP). Hatchlings were gavaged daily with safflower oil or 1.5 ug/g bw/day of ITP suspended in safflower oil, then bled on days 9, 17, and 21. The ITP treatment group ( n = 18) and a subset of controls (Poly I:C treatment group; n = 10) were injected on days 9 and 15 with a synthetic analog of viral double-stranded RNA, polyinosinic:polycytidylic acid (Poly I:C), a toll-like receptor ligand and synthetic viral mimic, and responses compared to a sham injected control group (n = 8). The hypotheses tested whether kestrels showed immunological differences among treatment groups, genetic sex, and/or white blood cell (WBC) subpopulation type over time. A flow cytometry (FCM) gating strategy categorized heterophils (H), lymphocytes (L), and monocytes (M) and their proportions, and measured relative fluorescence in response to anti-chicken CD4 binding. Fluorescent cell surfaces and some granular/vacuolar inclusions were visualized by epifluorescence microscopy. A fourth subpopulation with higher levels of granularity than M but less than H became increasingly apparent with time and was gated along with the H subpopulation; its frequency of occurrence was lowest in the ITP group ( P = 0.0023). The percentages of cells differed among treatment groups, days, and sexes ( P = 0.0001). For both sexes, percentages of H and L were higher than M in control and Poly I:C. In the ITP group, L percentages were higher than H and M ( P = 0.0457), and H and L were higher than M on days 9 and 21 ( P = 0.0001). The ratios of H:L and H:WBC, indicators of robust immunity, were also higher on days 9 and 21 than on 17 ( P = 0.0079). For each sex, the highest levels of activity measured by FCM geometric means (GEO) of fluorescence (indicative of antibody binding) were observed on day 9 ( P = 0.0001 female, and P = 0.0011 male) in H over both L and M ( P < 0.0001 for each). In males, GEO of the Poly I:C group was higher than that of the ITP group ( P = 0.0374), with no difference observed among females over all days. By using a FCM algorithm for population comparisons of fluorescence to investigate binding within H, the T(x) scores indicated higher fluorescence in control and Poly I:C groups over ITP ( P = 0.0001). Unlike chickens, Gallus gallus , which express CD4 primarily on L, kestrels bound the commercial antibody primarily within the gated H subpopulation, suggesting an immunophenotypic difference between taxa, despite a ~60% identity of Falco CD4 amino acid sequences with chicken CD4. The emergent cell subset within the gated H presented dendritic-like cell (DLC) morphological and functional properties, apparently serving as an effector cell. This study adds interpretive context to ecological investigations of infection and of potential immunomodulation by emerging compounds, whereby the early innate responses are mediated by the various cell subsets serving as useful quantitative markers of immunological condition. Data showed that dietary exposure to ITP was immunosuppressive for male and female kestrels over the course of the experiment, reducing DLC frequency compared to the Poly I:C controls. Heterophils and DLC were important in facilitating innate immunological responses.

Environment International↗
USGS2022

Hepatic gene expression profiling of American kestrels (Falco sparverius) exposed in ovo to three alternative brominated flame retardants

A number of brominated flame retardants (BFRs) have been reported to interfere with the thyroid signaling pathway and cause oxidative stress in birds, yet the underlying shifts in gene expression associated with these effects remain poorly understood. In this study, we measured hepatic transcriptional responses of 31 genes in American kestrel ( Falco sparverius ) hatchlings following in ovo exposure to one of three high-volume alternative BFRs: 1,2-bis(2,4,6-tribromophenoxy) ethane (BTPBE), bis(2-ethylhexyl)-2,3,4,5-tetrabromophthalate (TBPH), or 2-ethylhexyl-2,3,4,5-tetrabromobenzoate (EHTBB). Hatchling kestrels exhibited shifts in the expression of genes related to oxidative stress ( CYP, GSTA, SOD, and GPX1 ), thyroid hormone metabolism and transport ( DIO1, DIO2 , and TTR ), lipid and protein metabolism (PPAR, HMGCR, FAB1, and LPL), and cytokine-mediated inflammation ( TLR3, IL18, IRF7, STAT3, RACK1, and CEBPB ). Male and female hatchlings differed in which genes were differentially expressed, as well as the direction of the effect (up- vs. downregulation). These results build upon our previous findings of increased oxidative stress and disrupted thyroid signaling pathway in the same hatchlings. Furthermore, our results indicate that inflammatory responses appear to occur in female hatchlings exposed to BTBPE and EHTBB in ovo. Gene expression analysis revealed multiple affected pathways, adding to the growing evidence that sublethal physiological effects are complex and are a concern for birds exposed to BTBPE, EHTBB, or TBPH in ovo.

Biology↗
USGS2019

In ovo exposure to brominated flame retardants Part II: Assessment of effects of TBBPA-BDBPE and BTBPE on hatching success, morphometric and physiological endpoints in American kestrels

Tetrabromobisphenol A bis(2,3-dibromopropyl ether) (TBBPA-BDBPE) and 1,2-bis(2,4,6-tribromophenoxy)ethane (BTPBE) are both brominated flame retardants (BFRs) that have been detected in birds; however, their potential biological effects are largely unknown. We assessed the effects of embryonic exposure to TBBPA-BDBPE and BTBPE in a model avian predator, the American kestrel ( Falco sparverius ). Fertile eggs from a captive population of kestrels were injected on embryonic day 5 (ED5) with a vehicle control or one of three doses within the range of concentrations that have been detected in biota (nominal concentrations of 0, 10, 50 or 100 ng/g egg; measured concentrations 0, 3.0, 13.7 or 33.5 ng TBBPA-BDBPE/g egg and 0, 5.3, 26.8 or 58.1 ng BTBPE/g egg). Eggs were artificially incubated until hatching (ED28), at which point blood and tissues were collected to measure morphological and physiological endpoints, including organ somatic indices, circulating and glandular thyroid hormone concentrations, thyroid gland histology, hepatic deiodinase activity, and markers of oxidative stress. Neither compound had any effects on embryo survival through 90% of the incubation period or on hatching success, body mass, organ size, or oxidative stress of hatchlings. There was evidence of sex-specific effects in the thyroid system responses to the BTBPE exposures, with type 2 deiodinase (D2) activity decreasing at higher doses in female, but not in male hatchlings, suggesting that females may be more sensitive to BTBPE. However, there were no effects of TBBPA-BDBPE on the thyroid system in kestrels. For the BTPBE study, a subset of high-dose eggs was collected throughout the incubation period to measure changes in BTBPE concentrations. There was no decrease in BTBPE over the incubation period, suggesting that BTBPE is slowly metabolized by kestrel embryos throughout their ∼28-d development. These two compounds, therefore, do not appear to be particularly toxic to embryos of the American kestrel.

Ecotoxicology and Environmental Safety↗
USGS2013

Migration and wintering areas of American Bitterns ( Botaurus lentiginosus ) that summer in central North America as determined by satellite and radio telemetry, 1998-2003

Twenty adult male American Bitterns (Botaurus lentiginosus) were marked on summer range in central North America with satellite tracking Platform Transmitter Terminals (PTTs) to document migration routes and wintering range. Nineteen complete fall migration routes were documented for 17 individuals. Of the successful migrations, 63% (n = 12) went to southern Florida, 32% (n = 6) to southern Louisiana, and 5% (n = 1) to the Gulf coast of Texas. Spring migrations for nine birds were documented, and 78% (n = 7) showed fidelity to breeding range. Two complete migrations for two individuals were documented, and they demonstrated fidelity to winter range. The longest, fastest movement documented was 2,300 km in less than 74 hr. Extensive, post-breeding dispersal was not observed in the adult male American Bitterns in this study. Six male American Bitterns were marked with PTTs on winter range in Florida and Texas. Spring migration for these birds was documented to Nebraska, North Dakota, Saskatchewan, Manitoba and Ontario. Sixty-seven American Bitterns were marked with Very High Frequency radio transmitters on summer ranges, and 16% (n = 11) were located on wintering grounds used by the satellite-tracked birds, further documenting the importance of the Everglades and the Louisiana coast as winter habitat for American Bitterns that breed in Central North America.

Waterbirds↗
USGS2000

Description and identification of American Black Duck, Mallard, and hybrid wing plumage

We developed a key to identify wings of hybrids between American Black Ducks (Anas rubripes) and Mallards (A. platyrhynchos). Material for analysis included review of historical descriptions dating from the late 1700's, older museum collections in Europe and North America, wings collected from hunters in North America and Great Britain, birds banded in Canada and the United States, and a flock of propagated hybrids. All first filial generation (F1) American Black Duck - Mallard hybrids were identified correctly with the key. A lower proportion of other hybrid cohorts (i.e., backcrosses of F1 to parental forms (P1), and second and third filial generations (F2, F3, etc.) were identified. We successfully identified a larger portion of male than female hybrids for all hybrid progeny cohorts examined except F1. The new key identified 2.37 times more hybrids in the 1977 U.S. Fish and Wildlife Service Parts Collection Survey (annual determination of the species, age, and sex composition of the waterfowl harvest using detached wings contributed by hunters) than were identified by standard techniques. The proportion of American Black Duck - Mallard hybrids to the American Black Duck parental population (the ratio: hybrids/[hybrids + American Black Ducks]) may therefore be closer to 0.132 than 0.056, the historically reported value. The hybrid key is suggested for use from North Carolina north in the Atlantic Flyway and Arkansas and Tennessee north in the Mississippi Flyway (areas where other members of the Mallard group will not confound assessment). We provide suggestions for further research that would assist identification of wings in parts collection surveys and permit estimation of the proportional representation of Mallard genes in the American Black Duck gene pool.

Report↗
USGS2018

Monitoring Least Bitterns (Ixobrychis exilis) in Vermont: Detection probability and occupancy modeling

Ixobrychus exillis (Least Bittern) is listed as a species of high concern in the North American Waterbird Conservation Plan and is a US Fish and Wildlife Service migratory bird species of conservation concern in the Northeast. Little is known about the population of Least Bitterns in the Northeast because of their low population density, tendency to nest in dense wetland vegetation, and secretive behavior. Urban and agricultural development is expected to encroach on and degrade suitable wetland habitat; however, we cannot predict the effects on Least Bittern populations without more accurate information on their abundance and distribution. We conducted surveys of wetlands in Vermont to assess the efficacy of a monitoring protocol and to establish baseline Least Bittern abundance and distribution data at a sample of 29 wetland sites. Surveys yielded detections of 31 individuals at 15 of 29 sites across 3 biophysical regions and at 5 sites where occupancy had not been previously reported. Probability of occupancy was positively related to wetland size and number of patches, though the relationships were not strong enough to conclude if these were true determinants of occupancy. Call—response broadcast surveys yielded 30 detections, while passive surveys yielded 13. Call—response broadcasts ( P = 0.897) increased the rate of detection by 55% compared to passive surveys ( P = 0.577). Our results suggest that call—response broadcast surveys are an effective means of assessing Least Bittern occupancy and may reduce bias in long-term monitoring programs.

Vermont↗
USGS1981

Mesurol as a bird repellent on wine grapes in Oregon and California

Field tests were conducted in California and Oregon from July to October 1978 to evaluate the effectiveness of Mesurol as a repellent to reduce bird damage to ripening wine grapes. A block of vines composed of two similar, adjacent plots was delineated at each of 20 vineyards. One randomly chosen plot within each block was treated with up to three applications of Mesurol (75% wettable powder) at a mean rate of 3.1 kg/ha. Damage assessments at harvest showed that the treatment significantly reduced bird damage in both states, but the actual level of bird damage protection provided by the treatment could not be calculated. Based on bird censuses, the primary grape-depredating species in Oregon vineyards was the American robin ( Turdus migratorius ), whereas house finches ( Carpodacus mexicanus ), California quail ( Lophortyx californicus ), goldfinches ( Spinus spp.), and robins were the primary species in California.

American Journal of Enology and Viticulture↗
USGS2019

Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway

We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014–2015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP) and HP IAVs to refine inference on the spatiotemporal extent of HP genome constellations and to evaluate possible evolutionary pathways. We screened samples from 1496 waterfowl and 1142 marine mammals collected from April 2014 to August 2015 and detected IAV RNA in 159 samples collected from birds ( n = 157) and pinnipeds ( n = 2). HP IAV RNA was identified in three samples originating from American wigeon ( Anas americana ). Genetic sequence data were generated for a clade 2.3.4.4 HP IAV-positive diagnostic sample and 57 LP IAV isolates. Phylogenetic analyses revealed that the HP IAV was a reassortant H5N8 virus with gene segments closely related to LP IAVs detected in mallards ( Anas platyrhynchos ) sampled in California and other IAVs detected in wild birds sampled within the Pacific Americas Flyway. In addition, our analysis provided support for common ancestry between LP IAVs recovered from waterfowl sampled in California and gene segments of reassortant HP H5N1 IAVs detected in British Columbia, Canada and Washington, USA. Our investigation provides evidence that waterfowl are likely to have played a role in the evolution of reassortant HP IAVs in the Pacific Americas Flyway during 2014–2015, whereas we did not find support for spill-over infections in potential pinniped hosts.

Emerging Microbes & Infections↗
USGS2021

Breeding waterbird populations have declined in south San Francisco Bay: An assessment over two decades

In south San Francisco Bay, former salt ponds now managed as wildlife habitat support large populations of breeding waterbirds. In 2006, the South Bay Salt Pond Restoration Project began the process of converting 50% to 90% of these managed pond habitats into tidal marsh. We compared American Avocet ( Recurvirostra americana ) and Black-necked Stilt ( Himantopus mexicanus ) abundance in south San Francisco Bay before (2001) and after approximately 1,300 ha of managed ponds were breached to tidal action to begin tidal marsh restoration (2019). Over the 18-year period, American Avocet abundance declined 13.5% (2,765 in 2001 vs. 2,391 in 2019), and Black-necked Stilt abundance declined 30.0% (1,184 in 2001 vs. 828 in 2019). Forster’s Tern ( Sterna forsteri ) abundance was 2,675 birds in 2019. In 2019, managed ponds accounted for only 25.8% of suitable habitats, yet contained 53.9%, 38.6%, and 65.6% American Avocet, Black-necked Stilt, and Forster’s Tern observations, respectively. Conversely, tidal marsh and tidal mudflats accounted for 42.9% of suitable habitats, yet contained only 18.4%, 10.3%, and 19.8% of American Avocet, Black-necked Stilt, and Forster’s Tern observations, respectively. Using a separate nest-monitoring data set, we found that nest abundance in south San Francisco Bay declined for all three species from 2005–2019. Average annual nest abundance during 2017–2019 declined 53%, 71%, and 36%, for American Avocets, Back-necked Stilts, and Forster’s Terns, respectively, compared to 2005–2007. Loss of island nesting habitat as a result of tidal marsh conversion and an increasing population of predatory California Gulls ( Larus californicus ) are two potential causes of these declines. All three species established nesting colonies on newly constructed islands within remaining managed ponds; however, these new colonies did not make up for the steep declines observed at other historical nesting sites. For future wetland restoration, retaining more managed ponds that contain islands suitable for nesting may help to limit further declines in breeding waterbird populations.

California↗