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USGS2010

Extended abstracts from the Coastal Habitats in Puget Sound (CHIPS) 2006 Workshop

Puget Sound is the second largest estuary in the United States. Its unique geology, climate, and nutrient-rich waters produce and sustain biologically productive coastal habitats. These same natural characteristics also contribute to a high quality of life that has led to a significant growth in human population and associated development. This population growth, and the accompanying rural and urban development, has played a role in degrading Puget Sound ecosystems, including declines in fish and wildlife populations, water-quality issues, and loss and degradation of coastal habitats. In response to these ecosystem declines and the potential for strategic large-scale preservation and restoration, a coalition of local, State, and Federal agencies, including the private sector, Tribes, and local universities, initiated the Puget Sound Nearshore Ecosystem Restoration Project (PSNERP). The Nearshore Science Team (NST) of PSNERP, along with the U.S. Geological Survey, developed a Science Strategy and Research Plan (Gelfenbaum and others, 2006) to help guide science activities associated with nearshore ecosystem restoration. Implementation of the Research Plan includes a call for State and Federal agencies to direct scientific studies to support PSNERP information needs. In addition, the overall Science Strategy promotes greater communication with decision makers and dissemination of scientific results to the broader scientific community. On November 14–16, 2006, the U.S. Geological Survey sponsored an interdisciplinary Coastal Habitats in Puget Sound (CHIPS) Research Workshop at Fort Worden State Park, Port Townsend, Washington. The main goals of the workshop were to coordinate, integrate, and link research on the nearshore of Puget Sound. Presented research focused on three themes: (1) restoration of large river deltas; (2) recovery of the nearshore ecosystem of the Elwha River; and (3) effects of urbanization on nearshore ecosystems. The more than 35 presentations covered a wide range of ongoing inter-disciplinary research, including studies of sediment geochemistry of aquatic environments, sediment budgets, tracking fish pathways, expansion of invasive forams, beach and nearshore sedimentary environments, using influence diagrams as a decision support tool, forage fish, submarine groundwater, and much, much more. The primary focus within these themes was on developing information on the physical, chemical, and biological processes, as well as the human dimensions, associated with the restoration or rehabilitation of the nearshore environment. The workshop was an excellent opportunity for USGS scientists and collaborators who are working on Puget Sound coastal habitats to present their preliminary findings, discuss upcoming research, and to identify opportunities for interdisciplinary collaboration. A compilation of extended abstracts from workshop participants, this proceedings volume serves as a useful reference for attendees of the workshop and for those unable to attend. Taken together, the abstracts in this report provide a view of the current status of USGS multidisciplinary research on Puget Sound coastal habitats.

Open-File Report↗

USGS1980

A preliminary report of the geohydrology of the Mississippi salt-dome basin

The U.S. Department of Energy is investigating the suitability of salt domes in the Mississippi salt-dome basin as repositories for storing radioactive wastes. The Department of Energy has requested that the U.S. Geological Survey describe the groundwater hydrology of the Mississippi salt-dome basin, giving special attention to direction and rate of movement of water. In this first part of a continuing investigation the data obtained from one year of extensive literature search and data compilation are summarized. The regional groundwater hydrology in the salt-dome basin is defined with respect to (1) groundwater flow, (2) facies changes, (3) geological structure, (4) recharge and discharge, (5) freshwater-saltwater relations, and (6) identification of localities where additional data are needed. From the 50 piercement-type salt domes in the Mississippi salt-dome basin three domes (Richton, Cypress Creek, and Lampton) were selected for more intensive study. To further evaluate the geohydrology of Richton, Lampton, and Cypress Creek domes as possible sites for storage of radioactive waste, an intensive geohydrologic study based on a comprehensive test drilling program near the domes is planned. (USGS)

Mississippi↗

USGS1981

Water-resources investigations of the U.S. Geological Survey in Colorado: fiscal year 1981

The report provides an overview of water-resources data collection and hydrologic investigations in Colorado from October 1, 1980, to September 30, 1981. Most of the work is carried out in cooperation with 51 Federal, State, and local agencies. Data are being collected at 503 surface-water gaging stations, 161 surface-water quality stations, and 1,151 observation wells. Sixty-seven hydrologic investigations are underway and are described in the report by a map showing the location of the study area and a statement of the purpose, objective, approach, progress, and plans. Twelve of the investigations are statewide, 6 are regional, 9 are in the Missouri River basin, 8 in the Arkansas River basin, 6 in the Rio Grande basin, and 5 are multistate. Listed in the report are references to 9 data reports and 27 interpretive reports released or published in fiscal year 1980 as a result of water-resources investigations in Colorado. (USGS)

Open-File Report↗

USGS2013

Modeling the Water - Quality Effects of Changes to the Klamath River Upstream of Keno Dam, Oregon

The Link River to Keno Dam (Link-Keno) reach of the Klamath River, Oregon, generally has periods of water-quality impairment during summer, including low dissolved oxygen, elevated concentrations of ammonia and algae, and high pH. Efforts are underway to improve water quality in this reach through a Total Maximum Daily Load (TMDL) program and other management and operational actions. To assist in planning, a hydrodynamic and water-quality model was used in this study to provide insight about how various actions could affect water quality in the reach. These model scenarios used a previously developed and calibrated CE-QUAL-W2 model of the Link-Keno reach developed by the U.S. Geological Survey (USGS), Watercourse Engineering Inc., and the Bureau of Reclamation for calendar years 2006-09 (referred to as the "USGS model" in this report). Another model of the same river reach was previously developed by Tetra Tech, Inc. and the Oregon Department of Environmental Quality for years 2000 and 2002 and was used in the TMDL process; that model is referred to as the "TMDL model" in this report. This report includes scenarios that (1) assess the effect of TMDL allocations on water quality, (2) provide insight on certain aspects of the TMDL model, (3) assess various methods to improve water quality in this reach, and (4) examine possible water-quality effects of a future warmer climate. Results presented in this report for the first 5 scenarios supersede or augment those that were previously published (scenarios 1 and 2 in Sullivan and others [2011], 3 through 5 in Sullivan and others [2012]); those previous results are still valid, but the results for those scenarios in this report are more current.

Oregon↗

USGS2014

Assessment of metal and trace element contamination in water, sediment, plants, macroinvertebrates, and fish in Tavasci Marsh, Tuzigoot National Monument, Arizona

Tavasci Marsh is a large freshwater marsh within the Tuzigoot National Monument in central Arizona. It is the largest freshwater marsh in Arizona that is unconnected to the Colorado River and is designated as an Important Bird Area by the Audubon Society. The marsh has been altered significantly by previous land use and the monument’s managers are evaluating the restoration of the marsh. In light of historical mining activities located near the marsh from the first half of the 20th century, evaluations of water, sediment, plant, and aquatic biota in the marsh were conducted. The evaluations were focused on nine metals and trace elements commonly associated with mining and other anthropogenic activities (As, Cd, Cr, Cu, Hg, Ni, Pb, Se, and Zn) together with isotopic analyses to understand the presence, sources and timing of water and sediment contaminants to the marsh and the occurrence in aquatic plants, dragonfly larvae, and fish. Results of water analyses indicate that there were two distinct sources of water contributing to the marsh during the study: one from older high elevation recharge entering the marsh at Shea Spring (as well as a number of unnamed seeps and springs on the northeastern edge of the marsh) and the other from younger low elevation recharge or from Pecks Lake. Water concentrations for arsenic exceeded the U.S. Environmental Protection Agency primary drinking water standard of 10 μg/L at all sampling sites. Surface waters at Tavasci Marsh may contain conditions favorable for methylmercury production. All surficial and core sediment samples exceeded or were within sample concentration variability of at least one threshold sediment quality guideline for As, Cd, Cr, Cu, Hg, Ni, Pb, and Zn. Several sediment sites were also above or were within sample concentration variability of severe or probable effect sediment quality guidelines for As, Cd, and Cu. Three sediment cores collected in the marsh have greater metal and trace element concentrations at depth for Bi, Cd, Cu, Hg, In, Pb, Sb, Sn, Te, and Zn. Radioisotope dating indicates that the elevated metal and trace element concentrations are associated with sediments deposited before 1963. Arsenic concentration was greater in cattail roots compared with surrounding sediment at Tavasci Marsh. Concentrations of As, Ni, and Se from yellow bullhead catfish (Ameiurus natalis) in Tavasci Marsh exceeded the 75th percentile of several other regional studies. Mercury concentration in dragonfly larvae and fish from Tavasci Marsh were similar to or greater than in Tavasci Marsh sediment. Future work includes a biologic risk assessment utilizing the data collected in this study to provide the monument management with additional information for their restoration plan.

Arizona↗

USGS2023

Historical changes to channel planform and bed elevations downstream from dams along Fall Creek and Middle Fork Willamette River, Oregon, 1926–2016

Operation of large, multipurpose dams within the Middle Fork Willamette River Basin, Oregon, including the Fall Creek sub-basin, have disrupted natural streamflow and sediment transport regimes and fish passage along the river corridors. Documenting channel morphology, including channel planform, landforms, vegetation cover, and river channel elevations at multiple points in time spanning the 20th and early 21st centuries, is useful for characterizing net changes occurring in response to construction and operation of these dams. The U.S. Geological Survey assessed historical channel changes that occurred within the past century in response to the construction and operation of flood-control dams by evaluating planimetric datasets (from 1926 plan and profile surveys and 1936 and 2016 aerial photographs) and elevation datasets (from 1926 plan and profile surveys and 2015 light detection and ranging [lidar]). This study specifically focuses on the lower 27.3 kilometers (km) of the Middle Fork Willamette River and the lower 11.5 km of Fall Creek, or the reaches downstream from the U.S. Army Corps of Engineers Dexter Dam and Fall Creek Dam, to the confluence with Coast Fork Willamette River. Altogether, compilation and evaluation of datasets for Fall Creek and the Middle Fork Willamette River downstream from the dams provide a foundation for understanding: channel morphology and patterns of geomorphic stability prior to dam construction in 1926 and 1936; channel morphology and patterns of lateral and vertical stability of the early 21st century that reflect present-day (post-dam) streamflow and sediment regimes as of 2015–16; and geomorphic transformations of the river corridors in the decades following dam construction, including changes in planform and bed elevation (determined from water-surface elevations). Findings from this study can be used to provide historical and geomorphic context for geomorphic responses to deep reservoir drawdowns on Fall Creek Lake that mobilize reservoir sediment downstream and informing other restoration and river-management activities; this report summarizes one component of a larger research effort to document the magnitude and spatial distribution of geomorphic responses to sediment releases from draining Fall Creek Lake. As of 2016, the modern Fall Creek flows through a narrow, semi-alluvial channel that efficiently conveys water and sediment at typical streamflows downstream from Fall Creek Dam. This channel planform, including the positions and distributions of bars and secondary water features (side channels, alcoves, and ponds), generally reflects pre-dam conditions in 1936, suggesting relatively modest morphological adjustments resulted from reductions in sediment supply and alterations to peak streamflow after dam construction. The most substantial morphologic change detected over this period was a reduction in unvegetated gravel bars. As of 2016, the modern Middle Fork Willamette River is a large, gravel-bed river that, despite substantial transformations in channel morphology and reduction in lateral dynamism following the construction of multiple upstream dams, remains a dominantly alluvial river. Prior to dam construction in 1926 and 1936, the reaches of the Middle Fork Willamette River downstream from Dexter Dam were laterally active with multi-thread and single-thread channels flanked by large, shifting gravel bars. Since streamflow regulation and other channel modifications in the mid-20th century, these reaches have become less laterally active and encompass a narrower floodplain corridor as abundant former gravel bars were converted to low-elevation floodplains colonized by young, dense forests. The Middle Fork Willamette River downstream from Dexter Dam has remained mostly vertically stable between 1926 and 2015, although localized segments possibly decreased in elevation as much as 2.3 meters.

Oregon↗

USGS1963

Geology and ground-water resources of Montgomery County, Alabama

Montgomery County includes an area of 790 square miles in east-central Alabama. The economy of Montgomery County is related primarily to the growing and processing of agricultural products. The county is in the northern part of the Coastal Plain. It consists of parts of four divisions of the Coastal Plain: the terraces, the Black Prairie, the Chunnennuggee Hills, and the flood plains. The county drains north and northwest into the Alabama and Tallapoosa Rivers, except for a small area in the southern part of the county that is drained by tributaries of the Conecuh River. Sedimentary rocks of Late Cretaceous age underlie Montgomery County. They are divided, in ascending order, into the following: Coker and Gordo formations of the Tuscaloosa group; Eutaw formation; and Mooreville and Demopolis chalks, Ripley formation, Prairie Bluff chalk, and Providence sand of the Selma group. The Clayton formation of Tertiary age crops out in a small area in the southern part of the county. Pleistocene terrace deposits of the ancestral Alabama River overlie the older rocks in the northern part of the county. Recent alluvium underlies the flood plains of the larger streams. The Cretaceous and younger rocks consist chiefly of clay, chalk, sandstone, sand, and gravel, and a few thin beds of limestone. These deposits are underlain by a basement complex of pre-Cretaceous crystalline rocks. Large-scale withdrawals of water began in the Montgomery area about 1885. Pumpage by the city of Montgomery in 1958 averaged about 15 million gallons per day. It is estimated that an additional 10 to 15 million gallons per day was pumped in the county for industrial, irrigation, domestic, and stock use. The principal aquifer in the country is the Eutaw formation. It supplies water to the city of Montgomery municipal wells, to industrial wells in the Montgomery area, and to most domestic and stock wells in the northern two-thirds of the county. Irrigation wells also tap the Eutaw. Yields from wells range from 350 to 600 gallons per minute. The Gordo formation, the upper part of the Coker formation, and the Pleistocene terrace deposits in the Montgomery area also yield moderate to large quantities of water to municipal and industrial wells. The lower part of the Coker formation is not developed as a source of water supply, but information obtained during the investigation rthat led to this report indicates that it may be a potential source of water to wells of large capacity. Sand beds in the Ripley formation, Providence sand, and Recent alluvium in -the southern part of the county yield adequate amounts of water to domestic and stock wells. Most of the ground water used in Montgomery County occurs under artesian conditions, although water-table conditions occur in the Pleistocene terrace deposits and Recent alluvium, and in the outcrop areas of the Eutaw and Eipley formations and the Providence sand. Most of the water recharging the Ooker, Gordo, and Eutaw formations in their areas of outcrop also is discharged in these areas; only a small quantity of water moves downdip beneath the overlying chalk beds. The natural discharge, and hence the natural recharge, is estimated to be 0.2 to 0.3 million gallons per day per square mile of outcrop. All ground water in the county is of chemical quality that is satisfactory for most uses, although locally it is high in iron or chloride content and is hard. Water from the Eutaw formation a few miles southwest of Montgomery's West well field is very high in chloride content. This water moves toward the cone of depression in the piezometric surface produced by pumping in the West well field. Much additional ground water could be pumped from the Eutaw formation, especially south of Montgomery's West well field. Additional water also is available from the upper part of the Coker formation. Before large groundwater developments are planned, however, the problems of well spacing and pumping rates should be studied in order to determine the maximum development permitted by the supply. Observation wells should be installed in the Eutaw formation southwest of Montgomery's West well field to detect encroachment of water of high chloride content from adjacent Lowndes County.

Alabama↗

USGS2016

Setting priorities for private land conservation in fire-prone landscapes: Are fire risk reduction and biodiversity conservation competing or compatible objectives?

Although wildfire plays an important role in maintaining biodiversity in many ecosystems, fire management to protect human assets is often carried out by different agencies than those tasked for conserving biodiversity. In fact, fire risk reduction and biodiversity conservation are often viewed as competing objectives. Here we explored the role of management through private land conservation and asked whether we could identify private land acquisition strategies that fulfill the mutual objectives of biodiversity conservation and fire risk reduction, or whether the maximization of one objective comes at a detriment to the other. Using a fixed budget and number of homes slated for development, we simulated 20 years of housing growth under alternative conservation selection strategies, and then projected the mean risk of fires destroying structures and the area and configuration of important habitat types in San Diego County, California, USA. We found clear differences in both fire risk projections and biodiversity impacts based on the way conservation lands are prioritized for selection, but these differences were split between two distinct groupings. If no conservation lands were purchased, or if purchases were prioritized based on cost or likelihood of development, both the projected fire risk and biodiversity impacts were much higher than if conservation lands were purchased in areas with high fire hazard or high species richness. Thus, conserving land focused on either of the two objectives resulted in nearly equivalent mutual benefits for both. These benefits not only resulted from preventing development in sensitive areas, but they were also due to the different housing patterns and arrangements that occurred as development was displaced from those areas. Although biodiversity conflicts may still arise using other fire management strategies, this study shows that mutual objectives can be attained through land-use planning in this region. These results likely generalize to any place where high species richness overlaps with hazardous wildland vegetation.

California↗

USGS2000

Waterfowl research priorities in the northern Great Plains

It is necessary periodically to identify research priorities so that future research will be directed toward the most pertinent issues in waterfowl ecology and management. To that end, Northern Prairie Wildlife Research Center convened a quorum of experts on the ecology of breeding waterfowl, the Waterfowl Working Group, to 1) develop a mission statement, 2) identify waterfowl research priorities in the northern Great Plains, and 3) determine the frequency for re-identifying research needs. Research needs (nonprioritized) identified by the group and described in detail herein included: 1) determine effects of landscape factors on demographics and recruitment of ducks in the Prairie Pothole Region; 2) develop, improve, or update estimates of important parameters used in existing models for management and planning; 3) evaluate waterfowl management activities at broad, regional scales; 4) direct studies at waterfowl species of concern; and 5) evaluate applicability of the bird-conservation-area concept to waterfowl. The Waterfowl Working Group will reconsider research priorities at 2-year intervals.

Wildlife Society Bulletin↗

USGS1983

Wildlife guilds in Arizona desert habitats

This report summarizes information produced from Interagency Agreement No. AA-851-IA1-27 between the Bureau of Land Management (BLM), USDI, and the Fish and Wildlife Service (FWS), USDI. The contract was instrumental in the final development of wildlife guilds for the Hualapai-Aquarius planning area of the BLM in westcentral Arizona, reported herein. The Arizona study area was selected for the application of the guilding technology because a thorough assessment of the floral and faunal resources had recently occurred in conjunction with the development of a grazing Environmental Impact Statement (EIS). Thus, the association of wildlife species with habitat type was well known, which aided in the compilation of the data base necessary for the development of guilds. Some data were also available that described the vegetative structure of habitats. This was useful in the development of a model that evaluated the quality of habitat on the basis of the diversity of cover in those habitats (Short 1982).

Arizona↗

USGS2007

Geochemistry of Surface and Ground Water in Cement Creek from Gladstone to Georgia Gulch and in Prospect Gulch, San Juan County, Colorado

In San Juan County, Colo., the effects of historical mining continue to contribute metals to ground water and surface water. Previous research by the U.S. Geological Survey identified ground-water discharge as a significant pathway for the loading of metals to surface water in the upper Animas River watershed from both acid-mine drainage and acid-rock drainage. In support of this ground-water research effort, Prospect Gulch was selected for further study and the geochemistry of surface and ground water in the area was analyzed as part of four sampling plans: (1) ten streamflow and geochemistry measurements at five stream locations (four locations along Cement Creek plus the mouth of Prospect Gulch from July 2004 through August 2005), (2) detailed stream tracer dilution studies in Prospect Gulch and in Cement Creek from Gladstone to Georgia Gulch in early October 2004, (3) geochemistry of ground water through sampling of monitoring wells, piezometers, mine shafts, and springs, and (4) samples for noble gases and tritium/helium for recharge temperatures (recharge elevation) and ground-water age dating. This report summarizes all of the surface and ground-water data that was collected and includes: (1) all sample collection locations, (2) streamflow and geochemistry, (3) ground-water geochemistry, and (4) noble gas and tritium/helium data.

Colorado↗

USGS1965

Hydrology of the Little Plover River basin, Portage County, Wisconsin, and the effects of water resource development

The Little Plover River basin is in the sand-plain area of central Wisconsin. The basin and the surrounding sand-plain area provide a good fish and wildlife habitat and is a popular locale for sport fishing. Good yields may be obtained in the area from irrigated crops, and the irrigated acreage has been increasing rapidly in recent years. Sportsmen and conservationists are concerned about the effects of increased development of the water resources on the streams as trout habitat. In the past, many political and legal conflicts among water users have arisen from erroneous opinions as to the behavior of water. Many of these conflicts would be diminished or eliminated if the participants were cognizant of fundamental hydrologic principles. This study was made to demonstrate the extent and nature of the interrelation of ground water and surface water and the fundamental hydrologic principles governing water movement. The study was also made to determine the hydrologic changes that might occur following development, to provide information that might be used as a basis for planning water development, and for drafting legislation that recognizes the relation between ground water and surface water. Water has been developed in the Little Plover River basin for industry, for domestic and stock supplies, and for irrigation. Irrigated acreage is increasing in the area, and the use of water for irrigation may alter the hydrology of the basin somewhat. About 4,000-4,500 acres of land within the basin, or 50-60 percent of the basin area, is suitable for irrigated farming, but probably no more than 2,500 acres will be under irrigation in any one year, unless present crop-rotation practices are changed. Most of the Little Plover River basin is underlain by from 40 to 100 feet of glacial outwash consisting of highly permeable sand and gravel. The glacial outwash is the main aquifer in the area and is capable of yielding large quantities of water to wells. An aquifer test in the area indicated that the coefficient of transmissibility of the glacial outwash is about 140,000 gallons per day per foot. The specific yield of the outwash is about 20 percent, as determined from water-level and streamfiow data. Morainal deposits occur locally with the glacial outwash. These deposits transmit water readily and do not form barriers to ground water in the outwash. Relatively impermeable crystalline rocks underlie the glacial deposits, and a sandstone ridge of low permeability impedes the movement of ground water from the basin by underflow. The glacial outwash and morainal deposits are recharged by infiltration of 9-10 inches of the 31 inches of precipitation that falls on the area in an average year. If it is not withdrawn by wells for consumptive use or by phreatophytes, water that infiltrates the sand and gravel discharges later into the Little Plover River. This ground-water discharge constitutes 90-95 percent of the total flow of the Little Plover River. Annual evapotranspiration varies considerably, but generally ranges from 2 to 8 inches less than the potential evapotranspiration of 24 inches. Consumptive use of irrigation water averages about 4 inches per year. Most of the water pumped from wells otherwise would be discharged to the stream, and consumptive use of irrigation water will deplete streamflow by the amount of evapotranspiration. Pumping wells have little effect on the water level in the highly permeable sand and gravel. Significant interference between wells would occur only if large capacity wells were within a few tens of feet of each other. Ground water and surface water are closely interrelated in the sand-plain area and ground-water withdrawals near the Little Plover River may cause a measurable streamflow depletion. In a test, a well that was pumping about 1,120 gpm (gallons per minute) and that was 300 feet from the stream derived about 30 percent of its flow from the stream after 3 days of pumping. For this study, the effects of increased ground-water development were evaluated from a hypothetical development schedule, for which it was assumed that 500 acres were irrigated the first year and that an additional 50 acres were irrigated in each succeeding year for 10 years. It also was assumed that the average annual consumptive-use requirement for irrigation water would be one- third of an acre-foot per acre. Calculations indicate that the maximum monthly rate of depletion due to the consumptive use of 4 inches of ground water per year on 500 acres would be about 0.4 cfs (cubic feet per second) the first year and 0.5 cfs after 10 years of pumping. Other computations indicate that the maximum monthly rate of depletion due to irrigating 500 acres the first year and 50 additional acres each year for 10 years would be about 0.8 cfs. Maximum depletion would occur during the summer months, concurrent with the irrigation withdrawals. Because of the close interrelation between ground and surface water, surface- water withdrawals will cause an increased inflow of ground water to the stream and a decline in ground-water levels near the stream. These effects were demonstrated by pumping from the stream. After 29 hours of pumping, a depletion of 1,120 gpm at a site 7,000 feet downstream was about 200 gpm less than the diversion at the pump. Most of the 200 gpm was supplied from the stream-banks, and ground-water levels near the stream declined as much as 0.3 foot. Computations indicated that ground-water inflow, following a streamflow diver- sion that lowered the stage 0.15 foot, would be 0.14 cfs after 5 days and 0.06 cfs after 30 days. The demonstration of the quantitative relation between ground water and surface water, as given by this study, should provide a sound basis for planning water development to minimize conflicts of interest. The demonstrations also should provide a basis for drafting legislation that recognizes the interrelation of ground water and surface water. Because the geology and the hydrology are relatively uniform throughout the sand plains, many of the methods and hydrologic values determined for this detailed study of the Little Plover River basin may be applied to other basins in the sand-plain area.

Wisconsin↗

USGS2010

Methylmercury cycling, bioaccumulation, and export from agricultural and non-agricultural wetlands in the Yolo Bypass

This 18-month field study addresses the seasonal and spatial patterns and processes controlling methylmercury (MeHg) production, bioaccumulation, and export from natural and agricultural wetlands of the Yolo Bypass Wildlife Area (YBWA). The data were collected in conjuntion with a Proposition 40 grant from the State Water Resources Control Board in support of the development of Best Management Practices (BMP's) for reducing MeHg loading from agricultural lands in the wetland-dominated Yolo Bypass to the Sacramento-San Joaquin River Delta. The four managemenr-based questions addressed in this study were: 1. Is there a different among agricultural and managfed wetland types in terms of Me Hg dynamic (production, degradation, bioaccumulation, or export)? 2. Does water residence time influence MeHg dynamics? 3. Does the application of sulfate-based fertilizer impact MeHg production rates? 4. Does the presence (or absence) of vegetation influence MeHg production rates? Measurements of MeHg concentrations in sediment, water, and biota (plants, invertebrates, and fish) were made to assess management-level patterns in five wetland types, which included three type of shallowly-flooded agricultural wetlands (white rice, wild rice, and fallow) and two types of managed wetlands (permanently and seasonally flooded). To strengthen our understanding of the processes underlying the seasonal and spatial patterns of MeHg cycling, additional exploratory factors were measured including ancillary sediment and water quality parameters, stable isotope fractionation (oxygen, sulfur, carbon, and nitrogen), photodemethylation rates, and daily-integrated hydrologic budgets. Samples and field data were collected from May 2007 to July 2008, and nearly all sample analyses were completed by September 2008 as per the Quality Assurance Program Plan (QAPP) requirements. Although wetland type was a major factor that drove the study design, within-field hydrology also proved to be an important factor controlling aqueous MeHg and total mercury (THg) concentrations and export. Overall, agricultural wetlands exhibited higher MeHg concentrations in overlying water, sediment, and biota than did managed seasonal and permanent wetlands. This appears to be partly due to higher rates of sediment in microbial production of MeHg on agricultural wetlands during the fall through spring period. Both sulfate- and iron-reducing bacteria have been implicated in the MeHg production process, and both were demonstrably active in all wetlands studied; however, sulfate-reducing bacteria were not stimulated by the addition of sulfate-based fertilizer to agricultural wetlands, suggesting that easily-degraded (labile) organic matter, rather than sulfate, was limiting their activity in these field types. The data suggest that agriculturally-managed soils promoted MeHg production through 1) enhanced microbial activity via higher temperatures and larger pools of labile carbon, and 2) enhanced pools of microbially available inorganic divalent mercury (Hg(II)) resulting from a decrease in reduced-sulfur, solid-phase minerals under oxic or only mildly reducing conditions. MeHg mass balances were assessed by comparing filed-specific MeHg loads for inlets vs. outlet flows. The overall mass balance for MeHg in surface water during the summer irrigation period (June - September 2007) indicated little to no net MeHg export from the six agricultural wetlands taken as a whole. Of the six agricultural wetlands, there was net overall MeHg export from two fields (one fallow and one white rice) during August, and from four of the six fields (one fallow, one white rice, and two wild rice) during September) Over the entire summer irrigation period, two of the fields (one fallow and one wild rive) showed net MeHg export, and the other four fields showed wither net import or no significant change. Rates of measured photomethylation and exchange between sediment and water pools suggest that both processes may be responsible for the lack of MeHg export. Despite significant differences during winter months between fields in surface water concentrations of MeHg, MeHg loads were not calculated in mid-winter because flood waters had overtopped field boundaries and field fidelity could not be established. During the summer 2007 irrigation season, surface water out-flows from agricultural wetlands were 9%-36% of inlet flows, and evaporation rates explained most of this water loss, with infiltration likely accounting for the remainder. Unfiltered aqueous MeHg concentrations increased from <1 ng L -1 in source waters to up to 10 ng L -1 in agricultural wetland drains during the summer irrigation period. Increases in solute concentration caused by evapoconcentration were estimated by determining concentration factors (outflow/inflow) for chloride (a conservative dissolved constituent) and by measuring oxygen isotope ratios ( 18 O/ 16 O, expressed as δ 18 O) in water. Increases in MeHg concentration from inflows-to-outflows exceeded those caused by evapoconcentration on several fields during the summer irrigation season. This was especially true when initial surface water MeHg concentrations were low, as seen in the southern block of fields receiving irrigation water directly from the Toe Drain. The northern block of fields received irrigation water from Greens Lake, which included Toe Drain water plus recirculated drain water from other agricultural fields within the Yolo Bypass and west of the Yolo Bypass; as such, the northern fields showed a smaller percentage increase in MeHg concentration because initial MeHg concentrations in surface water inflows were greater than in inputs to the southern fields. Mercury concentrations in fish were greater in agricultural wetlands white rice and wild rice) than in the two permanently flooded wetlands. Additionally, Hg concentrations in biota showed a general increase from inlets to outlets withing agricultural wetlands, but not within permanent wetlands. This was particular evident in white rice fields where caged western mosquitofish at the outlets had Hg concentrations that were more than 4 times higher than in caged fish held at the inlets. Similar spatial patterns in Hg bioaccumulation in agricultural and permanent wetlands were seen for wild populations of western mosquitofish and Mississippi silversides. In contrast to fish, invertebrates, such as water-boatman (Corixidae) and back swimmers (Notonectidae), had greater Hg concentrations in permanent wetlands than in tempoarirly flooded agricultural wetlands, Fish THg concentrations were weakly correlated with water MeHg,a and not correlated with sediment MeHg. In contrast, invertebrate MeHg concentrations were more strongly correlated with sediment MeHg than with water MeHg concentrations. These results illustrate the complexity of MeHg bioaccumulation through food webs and indicate the importance of simultaneously using multiple biosentinels when monitoring MeHg production and bioaccumulation. Despite high sediment production rates and water concentrations in agricultural wetlands, MeHg export was physically limited by hydrologic export for all wetlands studied. We suggest that load reduction is maximized by limiting water throughout, but that on-site biota exposure is maximized by this loner water residence time. While field-specific hydrologic loads could not be fully quantified during flood conditions in February 2008, we suggest that the primary period of MeHg export from Yolo Bypass Wildlife Area is during those winter flooding periods when overall microbial activity and MeHg production in agricultural soils is fueled by the decomposition of rice straw, and when hydrologic flowthrough is maximal. Local stakeholders participated in two workshops related to this study, demonstrating an interest in understanding factors controlling MeHg production, export, and bioaccumulation. The results of this field study show that permanently flooded, naturally vegetated wetlands are unlikely to a large source of MeHg production within the YBWA, in contrast with agriculturally-managed wetlands. MeHg loading to Toe Drain waters of the Yolo Bypass may be reduced by lowering rated of hydrologic export from agricultural wetlands during the growing season and especially during rice harvest, However, under these water-holding conditions, biota living within agricultural wetlands may thus be exposed to higher MeHg concentrations in surface water, As observed in this study, rapid bioacculumaltion over a 2-month period led to MeHg concentrations in invertebrates and fish more than 6 and 11 times higher, respectively, than proposed TMDL target values to protect wildlife (0.03 ppm ww). The results of this field study, together with the information from YBWA stakeholders, provide a more definitive understanding of how MeHg cycling and bioaccumulation respond to habitat differences and specific management practices. These results directly address 4 core components of CBDA's Mercury Strategy for the Bay-Delta Ecosystem (Wiener et al., 2003a): a) Quantification and evaluation of THg and MeHg sources, b) Quantification of effects of ecosystem restoration on MeHg exposure, c) Assessment of ecological risk, and d) Identification and testing of potential management approaches for reducing MeHg contamination. In addition, the quantitative results reported here assess the effect of current land use practices in the Yolo Bypass MeHg production, bioaccumulation and export, and provide process-based advice towards achieving current goals of the RWQCB-CVR's Sacramento -- San Joaquin Delta Estuary TMDL for Methyl & Total Mercury (Wood et al., 2010b). Further work is necessary to evaluate biotic exposure in the Yolo Bypass Wildlife Area at higher trophic levels (e.g. birds), to quantify winter hydrologic flux of MeHg to the larger Delta ecosystem, and to evaluate rice straw management options to limit labile carbon supplies to surface sediment during winter months. In summary, agricultural management of rice fields -- specifically the periodic flooding and production of easily degraded organic matter -- promotes the production of MeHg beyond rates seen in naturally vegetated wetlands, whether seasonally or permanently flooded., The exported load from MeHg from these agricultural wetlands may be controlled by limiting hydrologic export from fields to enhance on-site MeHg removal processes, but the tradeoff is that this impoundement increases Me Hg exposure to resident organisms.

California↗

USGS2022

Great Lakes spatial priorities study

Spatial data about the bathymetry, habitat characteristics, underlying geology, and other features of the ocean and inland seas are essential for decision-making. Marine research and management organizations use these data to help ensure safe navigation, promote sustainable fisheries, extract energy, and protect marine habitats in the coastal and ocean waters of the U.S. Exclusive Economic Zone (EEZ) and Laurentian Great Lakes. Many of these organizations may have overlapping or shared mapping interests without knowing it. In a multi-jurisdictional planning environment, it can be challenging and cumbersome to determine where other entities have shared or overlapping mapping interests, especially across a transnational region such as the Great Lakes. State and provincial governments, federal governments, academia, tribes and First Nations, and other stakeholders from both the U.S. and Canada all have mapping interests across Great Lakes waters. Identifying and communicating target geographies for new data collection that are shared among multiple organizations can both help to avoid redundancy of new mapping efforts, and create opportunities for greater efficiency through collaboration. To address this issue, a spatial priorities study was conducted using a geospatial tool developed by the National Ocean Services National Centers for Coastal and Ocean Science (NCCOS). The tool provided an easy-to-use online interface in which programs can identify their priorities in a simple and straightforward way. This study asked representatives of Great Lakes management and science organizations to identify the areas for which they needed maps of lakebed features on a near-term, mid-term, and long-term timeframe, and why. Then, the responses were analyzed and overlaid to determine areas of shared mapping need and opportunity and to determine the types of map products needed. The analysis revealed high interest among multiple organizations in discrete geographies including the Minnesota and Wisconsin shoreline from Duluth to the eastern extent of the Bayfield Peninsula, Green Bay in Lake Michigan, and the southern coastlines of Lake Erie and Lake Ontario, the St. Marys River, and the northern Lake Superior coastal waters near Grand Portage, MN. Lower priority mapping interest were distributed widely across all lakes, but tended to be concentrated in nearshore areas (<30 m depth). The analysis also indicated that the top mapping justifications were Habitat/biota/natural area, Benthic exploration, Commercial and recreational fishing, and Scientific research. The top desired map product types were Elevation, Substrate/sub-bottom geologic characterization, and Habitat map/characterization, although participants on some lakes noted other less prevalent product types. Following from previously conducted NOAA and non-NOAA Federal spatial prioritization exercises, the results of this regional focus can help mapping organizations better understand how their priorities align with the needs of regional organizations, allow for more efficient coordination and funding, and enable partners to leverage assets and resources to fill their most pressing data and information gaps across Great Lakes waters. The U.S. Mapping Coordination Site hosts the results of this study and other spatial prioritization studies. Through this website, one can interact with the study results along with recent and planned mapping efforts. NOAA intends to update their spatial priorities on a three- to five-year basis. Future studies should strive to expand participation of federal agencies, state and local governments, federally-recognized tribes, academia, and private industry (among other stakeholders) to seek out ocean mapping partnerships in conjunction with the National Ocean Mapping, Exploration and Characterization (NOMEC) goals map once, use many times.”

Great Lakes↗

USGS2010

Strategic Science for Coral Ecosystems 2007-2011

Shallow and deep coral ecosystems are being imperiled by a combination of stressors. Climate change, unsustainable fishing practices, and disease are transforming coral communities at regional to global scales. At local levels, excessive amounts of sediments, nutrients, and contaminants are also impacting the many benefits that healthy coral ecosystems provide. This Plan, Strategic Science for Coral Ecosystems, describes the information needs of resource managers and summarizes current research being conducted by U.S. Geological Survey (USGS) scientists and partners. It outlines important research actions that need to be undertaken over the next five years to achieve more accurate forecasting of future conditions and develop more effective decision-support tools to adaptively manage coral ecosystems. The overarching outcome of this Plan, if fully implemented, would be in transferring relevant knowledge to decision-makers, enabling them to better protect and sustain coral ecosystem services. These services include sources of food, essential habitat for fisheries and protected species, protection of coastlines from wave damage and erosion, recreation, and cultural values for indigenous communities. The USGS has a long history of research and monitoring experience in studying ancient and living coral communities and serving many stakeholders. The research actions in this Plan build on the USGS legacy of conducting integrated multidisciplinary science to address complex environmental issues. This Plan is responsive to Federal legislation and authorities and a variety of external and internal drivers that include the President's Ocean Action Plan, the recommendations of the Coral Reef Task Force, the information needs of Bureaus in the Department of Interior, the USGS Bureau Science Strategy (USGS 2007) and the formal plans of several USGS Programs. To achieve this Plan's desired outcomes will require increased funding and more effective coordination and collaboration among USGS managers and scientists within a national and international framework of partnerships in coral ecosystem science.

Circular↗

USGS2005

Utility of Penman-Monteith, Priestley-Taylor, reference evapotranspiration, and pan evaporation methods to estimate pasture evapotranspiration

Actual evapotranspiration (ETa) was measured at 30-min resolution over a 19-month period (September 28, 2000-April 23, 2002) from a nonirrigated pasture site in Florida, USA, using eddy correlation methods. The relative magnitude of measured ETa (about 66% of long-term annual precipitation at the study site) indicates the importance of accurate ET a estimates for water resources planning. The time and cost associated with direct measurements of ETa and the rarity of historical measurements of ETa make the use of methods relying on more easily obtainable data desirable. Several such methods (Penman-Monteith (PM), modified Priestley-Taylor (PT), reference evapotranspiration (ET 0), and pan evaporation (Ep)) were related to measured ETa using regression methods to estimate PM bulk surface conductance, PT ??, ET0 vegetation coefficient, and Ep pan coefficient. The PT method, where the PT ?? is a function of green-leaf area index (LAI) and solar radiation, provided the best relation with ET a (standard error (SE) for daily ETa of 0.11 mm). The PM method, in which the bulk surface conductance was a function of net radiation and vapor-pressure deficit, was slightly less effective (SE=0.15 mm) than the PT method. Vegetation coefficients for the ET0 method (SE=0.29 mm) were found to be a simple function of LAI. Pan coefficients for the Ep method (SE=0.40 mm) were found to be a function of LAI and Ep. Historical or future meteorological, LAI, and pan evaporation data from the study site could be used, along with the relations developed within this study, to provide estimates of ETa in the absence of direct measurements of ETa. Additionally, relations among PM, PT, and ET0 methods and ETa can provide estimates of ETa in other, environmentally similar, pasture settings for which meteorological and LAI data can be obtained or estimated. ?? 2004 Elsevier B.V. All rights reserved.

Journal of Hydrology↗

USGS2002

Space use, migratory connectivity, and population segregation among Willets breeding in the western Great Basin

Western Willets ( Catoptrophorus semipalmatus inornatus ) were banded (n = 146 breeding adults and chicks) and radio-marked (n = 68 adults) at three western Great Basin wetland complexes to determine inter- and intraseasonal space use and movement patterns (primarily in 1998 and 1999). Birds were then tracked to overwintering sites where migratory connectivity and local movements were documented. Willets arrived synchronously at breeding sites during mid-April and spent less than 12 weeks in the Great Basin. There were no movements to other sites in the Great Basin during the breeding or postbreeding season. However, most breeding birds moved locally on a daily basis from upland nest sites to wetland foraging sites. The mean distance breeding birds were detected from nests did not differ between sexes or between members of a pair, although these distances were greater among postbreeding than breeding birds. Home-range estimates did not differ significantly between paired males and females during breeding or postbreeding. However, female home ranges were larger following breeding than during breeding. Shortly after chicks fledged, adult Willets left the Great Basin for locations primarily at coastal and estuarine sites in the San Francisco Bay area. Limited data revealed little among-site movements once Willets arrived at the coast, and birds appeared to be site faithful in subsequent winters. Winter sites of western Great Basin Willets differed from those used by birds from other areas in the subspecies' range, suggesting another subspecies or distinct population segment may exist. This study illustrates the importance of understanding movements and space use throughout the annual cycle in conservation planning.

California, Oregon↗

USGS2018

Remote sensing vegetation index methods to evaluate changes in greenness and evapotranspiration in riparian vegetation in response to the Minute 319 environmental pulse flow to Mexico

During the spring of 2014, 130 million m 3 of water were released from the United States' Morelos Dam on the lower Colorado River to Mexico, allowing water to reach the Gulf of California for the first time in 13 years. Our study assessed the effects of water transfer or ecological environmental flows from one nation to another, using remote sensing. Spatial applications for water resource evaluation are important for binational, integrated water resources management and planning for the Colorado River, which includes seven basin states in the US plus two states in Mexico. Our study examined the effects of the historic binational experiment (the Minute 319 agreement) on vegetative response along the riparian corridor. We used 250 m Moderate Resolution Imaging Spectroradiometer (MODIS), Enhanced Vegetation Index (EVI) and 30 m Landsat 8 satellite imagery to track evapotranspiration (ET) and the normalized difference vegetation index (NDVI). Our analysis showed an overall increase in NDVI and evapotranspiration (ET) in the year following the 2014 pulse, which reversed a decline in those metrics since the last major flood in 2000. NDVI and ET levels decreased in 2015, but were still significantly higher ( P < 0.001) than pre-pulse (2013) levels. Preliminary findings show that the decline in 2015 persisted into 2016 and 2017. We continue to analyse results for 2018 in comparison to short-term (2013–2018) and long-term (2000–2018) trends. Our results support the conclusion that these environmental flows from the US to Mexico via the Minute 319 “pulse” had a positive, but short-lived (1 year), impact on vegetation growth in the delta.

Colorado River Delta↗