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At least 667 records · Page 37Linked to original sources
USGS2024

Implementation of the CREED approach for environmental assessments

Environmental exposure data are a key component of chemical and ecological assessments, supporting and guiding environmental management decisions and regulations. Measures taken to protect the environment based on exposure data can have social and economic implications. Flawed information may lead to measures being taken in the wrong place or to important action not being taken. Although the advantages of harmonizing evaluation methods have been demonstrated for hazard information, no comparable approach is established for exposure data evaluation. The goal of Criteria for Reporting and Evaluating Exposure Datasets (CREED) is to improve the transparency and consistency with which exposure data are evaluated regarding usability in environmental assessments. Here, we describe the synthesis of the CREED process, and propose methods and tools to summarize and interpret the outcomes of the data usability evaluation in support of decision-making and communication. The CREED outcome includes a summary that reports any key gaps or shortcomings in the reliability (data quality) and relevance (fitness for purpose) of the data being considered. The approach has been implemented in a workbook template (provided as Supporting Information), for assessors to readily follow the workflow and create a report card for any given dataset. The report card communicates the outcome of the CREED evaluation and summarizes important dataset attributes, providing a concise reference pertaining to the dataset usability for a specified purpose and documenting data limitations that may restrict data use or increase environmental assessment uncertainty. The application of CREED is demonstrated through three case studies, which also were used during beta testing of the methodology. As experience with the CREED approach application develops, further improvements may be identified and incorporated into the framework. Such development is to be encouraged in the interest of better science and decision-making, and to make environmental monitoring and assessment more cost-effective.

Integrated Environmental Assessment and Management↗
USGS2022

Hurdles to developing quantitative decision support for Endangered Species Act resource allocation

The U.S. Fish and Wildlife Service oversees the recovery of many species protected by the U.S. Endangered Species Act (ESA). Recent research suggests that a structured approach to allocating conservation resources could increase recovery outcomes for ESA listed species. Quantitative approaches to decision support can efficiently allocate limited financial resources and maximize desired outcomes. Yet, developing quantitative decision support under real-world constraints is challenging. Approaches that pair research teams and end-users are generally the most effective. However, co-development requires overcoming “hurdles” that can arise because of differences in the mental models of the co-development team. These include perceptions that: (1) scarce funds should be spent on action, not decision support; (2) quantitative approaches are only useful for simple decisions; (3) quantitative tools are inflexible and prescriptive black boxes; (4) available data are not good enough to support decisions; and (5) prioritization means admitting defeat. Here, we describe how we addressed these misperceptions during the development of a prototype resource allocation decision support tool for understanding trade-offs in U.S. endangered species recovery. We describe how acknowledging these hurdles and identifying solutions enabled us to progress with development. We believe that our experience can assist other applications of developing quantitative decision support for resource allocation.

Frontiers in Conservation Science↗
USGS2018

Evaluating trade-offs in bull trout reintroduction strategies using structured decision making

Structured decision making allows reintroduction decisions to be made despite uncertainty by linking reintroduction goals with alternative management actions through predictive models of ecological processes. We developed a decision model to evaluate the trade-offs between six bull trout ( Salvelinus confluentus ) reintroduction decisions with the goal of maximizing the number of adults in the recipient population without reducing the donor population to an unacceptable level. Sensitivity analyses suggested that the decision identity and outcome were most influenced by survival parameters that result in increased adult abundance in the recipient population, increased juvenile survival in the donor and recipient populations, adult fecundity rates, and sex ratio. The decision was least sensitive to survival parameters associated with the captive-reared population, the effect of naivety on released individuals, and juvenile carrying capacity of the reintroduced population. The model and sensitivity analyses can serve as the foundation for formal adaptive management and improved effectiveness, efficiency, and transparency of bull trout reintroduction decisions.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2016

Assessing the socioeconomic impact and value of open geospatial information

The production and accessibility of geospatial information including Earth observation is changing greatly both technically and in terms of human participation. Advances in technology have changed the way that geospatial data are produced and accessed, resulting in more efficient processes and greater accessibility than ever before. Improved technology has also created opportunities for increased participation in the gathering and interpretation of data through crowdsourcing and citizen science efforts. Increased accessibility has resulted in greater participation in the use of data as prices for Government-produced data have fallen and barriers to access have been reduced. The increase in participation in the production and in the use of data, defined as data democracy for this workshop, are having great impacts on economics and more generally on society. There is also a strong drive by governments around the world, as shown by the G8 Declaration in June 2013, to make public sector information and scientific data more widely accessible. These are respectively termed “open data” and “open research data.” This report summarizes discussion at the Workshop on Assessing the Impact and Value of Open Geospatial Information held at George Washington University in Washington, D.C. in October 2014. Workshop participants examined the consequences of expanding data democracy with a focus on its socioeconomic impacts. Evaluations were presented of state-of-the-art methods to assess these socioeconomic impacts, which included position papers and remarks by discussants. The workshop included discussions about the following topics: (1) increased and expanded information sources; (2) societal impacts, including approaches to economics assessments; (3) constraints to open access, including the demands for return on investment, specifications of intellectual property rights, and privacy issues; and (4) learning from the experiences of other data-rich domains, such as environmental management, internet businesses, health, and transportation. The workshop was a working meeting with strong participant engagement, leading to recommendations for action. The meeting included five topic-driven sessions and keynote presentations. Precirculated position papers for each panel session facilitated preparation and remarks by discussants. After the position papers are updated following the discussants’ remarks, it is planned to submit them for publication. The workshop included 68 participants coming from international organizations, the U.S. public and private sectors, nongovernmental organizations, and academia. Participants included policy makers and analysts, financial analysts, economists, information scientists, geospatial practitioners, and other discipline experts.

Open-File Report↗
USGS2025

Practical pathways for protecting headwater streams in urbanizing areas

Headwater streams are diverse ecosystems and important sources of water and dissolved and particulate resources to the downstream river network. However, across the world, they are rapidly being degraded or lost through human activities, particularly urban development. This degradation and loss have negative consequences for the structure and function of headwater streams, as well as downstream river networks. Despite long-held recognition of the ecological value of headwater streams and the impacts of their widespread loss, there remains a large gap between developing strategies and tangible action. To address this gap, we, a group of cross-disciplinary researchers and practitioners from multiple organizations and locations, developed a framework to guide strategic decision-making and a comprehensive set of structural and nonstructural tools that can be used to protect headwater streams in urbanizing areas where opportunities to protect waterway health are being considered by local waterway practitioners and the community. The framework was tested by applying it to 4 contrasting case studies of urbanization with different physiographic, policy, and legislative settings. Our evaluation showed that the framework provides a useful generic mechanism that can be used by policymakers, planners, and other stakeholders to diagnose the status of headwater stream protection in a variety of urban areas and to support structured stakeholder conversations about what is desirable, practical, and achievable for their context.

Freshwater Science↗
USGS2014

Abundance of host fish and frequency of glochidial parasitism in fish assessed in field and laboratory settings and frequency of juvenile mussels or glochidia recovered from hatchery-held fish, central and southeastern Texas, 2012-13

In 2012–13, the U.S. Geological Survey (USGS), in cooperation with the U.S. Fish and Wildlife Service (USFWS), completed the first phase of a two-phase study of mussel host-fish relations for five endemic mussel species in central and southeastern Texas that were State-listed as threatened on January 17, 2010: (1) Texas fatmucket ( Lampsilis bracteata ), (2) golden orb ( Quadrula aurea ), (3) smooth pimpleback ( Quadrula houstonensis ), (4) Texas pimpleback ( Quadrula petrina ), and (5) Texas fawnsfoot ( Truncilla macrodon ). On October 6, 2011, the USFWS announced the completion of a status review and determined that the five mussel species warranted listing under the Endangered Species Act; however, listing of these species at that time was precluded by higher priority listing actions, and currently (December 2014), they remained unlisted. Freshwater mussels are long-lived, sedentary organisms that spend their larval stage as obligate parasites on the gills or fins of fishes, and many of these larvae, which are referred to as “glochidia,” can survive only on a narrow range of host-fish species. Results from both study phases are likely to provide information useful for propagation of rare mussels, reintroduction of host fish, population and reproduction monitoring, habitat restoration and enhancement, and adaptive management. The abundance of host fish, frequency of parasitism in fish, and frequency of juvenile mussels or glochidia recovered from hatchery-held fish was assessed by collecting fish and mussels at 14 sites distributed among seven streams in central and southeastern Texas (juvenile mussels and glochidia were not differentiated in hatchery-held fish). All fish collected and assessed in this study were wild-caught. Qualitative surveys of the resident mussel communities were made, focusing on the five candidate species. A subsample (3 percent in 2012 and 19 percent in 2013) of the fish collected during aquatic biota surveys was submitted to the USFWS San Marcos National Fish Hatchery and Technology Center to collect juvenile mussels and glochidia recovered from the host fish, which were held for 28 days in holding tanks to allow time for most of the attached glochidia to release from the gills of the fish after transforming into juvenile mussels. All fish not sent to the hatchery were assessed for glochidia in the field or in the USGS Texas Water Science Center laboratory in Austin, Tex. Juvenile mussels and glochidia that were recovered from fish at the hatchery were submitted for use in the second phase of this study, the development of deoxyribonucleic acid (DNA) identification keys to determine mussel and host-fish relationships through DNA-based molecular identification (DNA typing of the juvenile mussels and glochidia). Reporting on the results of DNA-based molecular identification research is beyond the scope of this report. In 2012, the majority of the fish that were collected, in terms of total number and species types, belonged to the sunfish family Centrarchidae (centrarchids; 1,277 individuals and at least 10 species). Redbreast sunfish ( Lepomis auritus ) was the most common species collected in 2012 (603 individuals), but the largemouth bass ( Micropterus salmoides ) species was caught at all 10 sites. The largest number of species (19) was collected at the San Saba Menard site (San Saba River near Menard, Tex.) on May 22, 2012. In 2013, most of the fish that were collected, in terms of total number and species types, were centrarchids (763 individuals) and cyprinids (10 species), respectively. Blacktail shiner ( Cyprinella venusta ) was the most common species collected in 2013 (287 individuals), but bluegill ( Lepomis macrochirus ) was the only species that was caught at all nine sites. The largest number of individuals (382) and species (19) was collected from the Colorado Columbus site (Colorado River near Columbus, Tex.) on June 11, 2013. A minimum of two fish (any species) parasitized with glochidia was collected from each of the 10 sites sampled during 2012. The highest percentage of parasitized fish (19.1 percent) was measured at the Guadalupe Victoria site (Guadalupe River near Victoria, Tex.). The catfish family Ictaluridae (ictalurids) exhibited the highest proportion of parasitized fish (12.1 percent). Of the nine sites sampled in 2013, the Pedernales Fredericksburg site (Pedernales River near Fredericksburg, Tex.) had the highest proportion of parasitized fish at 22.7 percent. Ictalurids again exhibited the highest frequency of parasitism (26.5 percent). Of the fish that were not sent to the hatchery but assessed for glochidia in the field or in the laboratory in 2012, at least 13 species were parasitized, and longear sunfish ( Lepomis megalotis ) was the species with the highest percentage of parasitized individuals (17.3 percent). Of the fish that were not sent to the hatchery but assessed for glochidia in the field or in the laboratory in 2013, only eight species were parasitized, and flathead catfish ( Pylodictis olivaris ) was the species with the highest percentage of parasitized individuals (42.9 percent). With the exception of the San Antonio Charco site, fish were submitted to the hatchery from all sampling sites in 2013. During the first sampling period in 2013 (April 1–5), slightly more than half (16 out of 29) of the fish species (on a per site basis) that were submitted to the hatchery released juvenile mussels and glochidia. Compared to the other sampling periods in 2013, substantially fewer glochidia per fish were present on fish submitted to the hatchery during the second sampling period in 2013 (April 29–May 2). Although only two sites were sampled during the third sampling period in 2013 (June 10–11), more juvenile mussels and glochidia were recovered at the hatchery during this sampling period (107) than were recovered during the first two sampling periods in 2013 combined (102). An average of 17 juvenile mussels or glochidia was recovered per largemouth bass submitted to the hatchery from the Guadalupe Victoria site during the third sampling period. A total of 19 fish species collected at nine sites was submitted to the hatchery in 2013, and 14 of these species had juvenile mussels or glochidia that were recovered at the hatchery. The three most productive species, in terms of the average number of juvenile mussels or glochidia recovered, were longear sunfish, spotted bass, and largemouth bass, each of which averaged more than two juvenile mussels or glochidia recovered per individual.

Texas↗
USGS2022

Natural infrastructure in dryland streams (NIDS) can establish regenerative wetland sinks that reverse desertification and strengthen climate resilience

In this article we describe the natural hydrogeomorphological and biogeochemical cycles of dryland fluvial ecosystems that make them unique, yet vulnerable to land use activities and climate change. We introduce Natural Infrastructure in Dryland Streams (NIDS), which are structures naturally or anthropogenically created from earth, wood, debris, or rock that can restore implicit function of these systems. This manuscript further discusses the capability of and functional similarities between beaver dams and anthropogenic NIDS, documented by decades of scientific study. In addition, we present the novel, evidence-based finding that NIDS can create wetlands in water-scarce riparian zones, with soil organic carbon stock as much as 200 to 1400 Mg C/ha in the top meter of soil. We identify the key restorative action of NIDS, which is to slow the drainage of water from the landscape such that more of it can infiltrate and be used to facilitate natural physical, chemical, and biological processes in fluvial environments. Specifically, we assert that the rapid drainage of water from such environments can be reversed through the restoration of natural infrastructure that once existed. We then explore how NIDS can be used to restore the natural biogeochemical feedback loops in these systems. We provide examples of how NIDS have been used to restore such feedback loops, the lessons learned from installation of NIDS in the dryland streams of the southwestern United States, how such efforts might be scaled up, and what the implications are for mitigating climate change effects. Our synthesis portrays how restoration using NIDS can support adaptation to and protection from climate-related disturbances and stressors such as drought, water shortages, flooding, heatwaves, dust storms, wildfire, biodiversity losses, and food insecurity.

Science of the Total Environment↗
USGS2019

How low should we go when warning for earthquakes?

A key goal of earthquake early warning (EEW) systems is to alert populations who may be affected by a particular level of ground shaking so that they can take action to reduce impacts of that shaking, such as injuries, damages to physical infrastructure, or emotional distress. Most EEW systems work by rapidly determining the location and size of an earthquake, estimating shaking levels, and then distributing an alert to potentially affected populations. But EEW systems are limited by how rapidly the size of an earthquake can be determined as well as the details of the earthquake rupture process, the path of the seismic waves, and the alert distribution mechanism. And we are just beginning to understand how people respond to earthquake alerts, often relying on anecdotes. Determining the appropriate shaking intensities for public warnings requires understanding the range of individual and societal responses to earthquake alerts. The decision on when to issue earthquake alerts must balance the technical capabilities and potential outcomes, both desired and undesired, when choosing a ground-motion alerting threshold. Only when benefits outweigh the risks and users are prepared for alerts should they be used to warn the public about the possibility of earthquake shaking.

Science↗
USGS2022

A future for the inland fish and fisheries hidden within the sustainable development goals

The United Nations Sustainable Development Goals (SDGs) are a unifying call for change - guiding global actions at multiple levels of governance for a better planet and better lives. Consequently, achieving the “future we want” may be hindered by overlooking valuable natural resources and services that are not explicitly included in the SDGs. Not recognizing the direct, intrinsic value of some natural resources may threaten the sustainability of the services they provide and their contributions to the SDGs. Here, we use inland aquatic ecosystems, and the fish and fisheries therein, as an example to explore opportunities for recognition and inclusion of other natural resources that are missing from the SDGs. Key resources absent from the SDGs are less likely to be incorporated in global, national, and regional objectives, dialogues, and policies. We outline multiple potential pathways for better inclusion and capitalization of contributions from these overlooked natural resources during the operationalization of the SDGs and other global instruments.

Frontiers in Environmental Science↗
USGS2013

U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative: 2011 annual report

This is the fourth report produced by the U.S. Geological Survey (USGS) for the Wyoming Landscape Conservation Initiative (WLCI) to detail annual work activities. In FY2011, there were 37 ongoing, completed, or new projects conducted under the five major multi-disciplinary science and technical-assistance activities: (1) Baseline Synthesis, (2) Targeted Monitoring and Research, (3) Data and Information Management, (4) Integration and Coordination, and (5) Decisionmaking and Evaluation. The four new work activities were (1) development of the Western Energy Citation Clearinghouse, a Web-based energy-resource database of references for literature and on-line resources focused on energy development and its effects on natural resources; (2) a study to support the Sublette County Conservation District in ascertaining potential water-quality impacts to the New Fork River from energy development in the Pinedale Anticline Project Area; (3) a study to test the efficacy of blending high-frequency temporal data provided by Moderate Resolution Imaging Spectroradiometer (MODIS) sensors and high-resolution Landsat data for providing the fine-resolution data required to evaluate habitat responses to management activities at the landscape level; and (4) a study to examine the seasonal water chemistry of Muddy Creek, including documenting salinity patterns and providing a baseline for assessing potential effects of energy and other development on water quality in the Muddy Creek watershed. Two work activities were completed in FY2011: (1) the assessment of rancher perceptions of energy development in Southwest Wyoming and (2) mapping aspen stands and conifer encroachment using classification and regression tree (CART) analysis for effectiveness monitoring. The USGS continued to compile data, develop geospatial products, and upgrade Web-based products in support of both individual and overall WLCI efforts, including (1) ranking and prioritizing proposed conservation projects, (2) developing the WLCI integrated assessment, (3) developing the WLCI 5-year Conservation Action Plan, and (4) continuing to upgrade the content and improve the functionality of the WLCI Web site. For the WLCI FY2012 annual report, a decision was made to greatly reduce the overall length of the annual report, which will be accomplished by simplifying the report format and focusing on the take-home messages of each work activity for WLCI partners.

Wyoming↗
USGS2009

Remote sensing of global croplands for food security: Way forward

This book opens a new pathway for global mapping that is focused on a specific land use theme, such as irrigated or rain-fed croplands and classes within these themes. Since croplands use most of the water consumed by humans, specific knowledge of irrigated and rain-fed croplands will be critical for precise estimates of water use. At present and in the coming decades, irrigated and rain-fed cropland area mapping is crucial for food security studies. Throughout this book, various subjects pertaining to global croplands are discussed comprehensively.

Book chapter↗
USGS2022

Standard operating protocol for mark and recapture monitoring of Brook Floater in streams

The Brook Floater ( Alasmidonta varicosa ) is a small (<100 mm) freshwater mussel (Family: Unionidae) found in streams of the eastern United States (U.S.) (Nedeau 2008). While there has been limited effort to document the status of Brook Floater across its range, there is evidence of Brook Floater range contraction and declining local abundances over recent decades (Wicklow et al. 2017, NatureServe 2021). Brook Floater is a Species of Greatest Conservation Need (SGCN) in 15 states (94% of range); listed as endangered, threatened, or special concern in nearly every state and province where it still occurs; and has been extirpated from two states (Rhode Island and Delaware). Brook Floater was petitioned for Federal listing under the U.S. Endangered Species Act; however, the listing was determined not to be warranted (U.S. FWS 2019), although it remains a Regional SGCN of very high concern in U.S. Fish & Wildlife Service (U.S. FWS) Regions 5 (Terwilliger 2015) and 4 (SEAFWA-WDC 2019) and is an At-Risk Species in U.S. FWS Region 5. A critical component of understanding population declines is site-specific information about population density and demographics (e.g., growth, age structure) to assess population viability. This information had previously only been collected for a few populations of Brook Floater (e.g., Massachusetts Division of Fisheries & Wildlife, North Carolina Wildlife Resources Commission) and methods to collect these data varied from state to state, thus limiting comparisons across the range. In 2016, a competitive State Wildlife Grant (SWG) was awarded to develop a standardized monitoring technique that will aid in understanding differences in population viability across its range and assess changes in populations through time. The protocol described in this report was subsequently developed and tested by Massachusetts and Maine (2 sites in each state) and revised based on field experiences. Data collected using this protocol will allow for state managers to make informed decisions about management actions for Brook Floater. Monitoring approaches are ideally designed to meet management objectives. Management objectives are specific, quantifiable outcomes that reflect the values of the decision makers and relate directly to the management decisions (Conroy and Peterson 2013). Lack of well-defined objectives hinders success of conservation and management actions because there are undefined metrics to determine when the objectives have been met (Yoccoz et al. 2001, Nichols and Thompson 2006). While monitoring to understand a system (i.e., status and trends; Reynolds et al. 2016) provides baseline information for developing management recommendations in the future, Nichols and Thompson (2006) criticize status and trends monitoring because of time lags associated with conservation and the costs and resource availability needed for surveillance, among other reasons. State partners in the Brook Floater SWG have a variety of different monitoring objectives (e.g., abundance/density, survival, recruitment) that depend on the population sizes and demographics. There are many approaches for estimating population parameters such as density, age structure, recruitment, and growth rates. For example, presence/absence (i.e., multistate models), counts (i.e., multi-state models or Dail-Madsen model; Dail and Madsen 2011), and capture mark-recapture (CMR; e.g. Cormack-Jolly-Seber models; Lindberg and Rexstad 2002) are all approaches for assessing population status and viability.

Cooperator Science Series↗
USGS2018

Challenges and opportunities developing mathematical models of shared pathogens of domestic and wild animals

Diseases that affect both wild and domestic animals can be particularly difficult to prevent, predict, mitigate, and control. Such multi-host diseases can have devastating economic impacts on domestic animal producers and can present significant challenges to wildlife populations, particularly for populations of conservation concern. Few mathematical models exist that capture the complexities of pathogens, yet development of such models would allow us to estimate and compare the potential effectiveness of management actions for mitigating or suppressing disease in wildlife and/or livestock host populations. We conducted a workshop in March 2014 to identify the challenges associated with developing models of pathogen transmission across the wildlife-livestock interface. The development of mathematical models of pathogen transmission at this interface is hampered by the difficulties associated with describing the host-pathogen systems including: 1) the identity of wildlife hosts, their distributions, and movement patterns, 2) the pathogen transmission pathways between wildlife and domestic animals, 3) the effects of the disease and concomitant mitigation efforts on wild and domestic animal populations, and 4) barriers to communication between sectors. To promote the development of mathematical models of transmission at this interface, we recommend further integration of modern quantitative techniques and improvement of communication among wildlife biologists, mathematical modelers, veterinary medicine professionals, producers, and other stakeholders concerned with the consequences of pathogen transmission at this important, yet poorly understood, interface.

Veterinary Sciences↗
USGS2019

State of knowledge on current exposure, fate and potential health effects of contaminants in polar bears from the circumpolar Arctic

The polar bear ( Ursus maritimus ) is among the Arctic species exposed to the highest concentrations of long-range transported bioaccumulative contaminants, such as halogenated organic compounds and mercury. Contaminant exposure is considered to be one of the largest threats to polar bears after the loss of their Arctic sea ice habitat due to climate change. The aim of this review is to provide a comprehensive summary of current exposure, fate, and potential health effects of contaminants in polar bears from the circumpolar Arctic required by the Circumpolar Action Plan for polar bear conservation. Overall results suggest that legacy persistent organic pollutants (POPs) including polychlorinated biphenyls, chlordanes and perfluorooctane sulfonic acid (PFOS), followed by other perfluoroalkyl compounds (e.g. carboxylic acids, PFCAs) and brominated flame retardants, are still the main compounds in polar bears. Concentrations of several legacy POPs that have been banned for decades in most parts of the world have generally declined in polar bears. Current spatial trends of contaminants vary widely between compounds and recent studies suggest increased concentrations of both POPs and PFCAs in certain subpopulations. Correlative field studies, supported by in vitro studies, suggest that contaminant exposure disrupts circulating levels of thyroid hormones and lipid metabolism, and alters neurochemistry in polar bears. Additionally, field and in vitro studies and risk assessments indicate the potential for adverse impacts to polar bear immune functions from exposure to certain contaminants.

Science of Total Environment↗
USGS2025

Perfluorodecanoic acid (PFDA) disrupts immune regulation via the toll-like receptor signaling pathway in zebrafish

As there are a growing number of per- and polyfluoroalkyl substances (PFAS) alternative substitutes applied globally, it remains paramount to characterize their potential health risks. Perfluorodecanoic acid (PFDA) is the most common alternative PFAS detected in the environment; however, its toxic effects and underlying mechanism of action to aquatic biota remains unclear. In this study, we present in vitro evidence of PFDA-induced immunotoxicity and gain insight into underlying molecular mechanisms. PFDA induced immune dysfunction in zebrafish primarily through immunosuppression, apoptosis, and inflammatory response which further cascaded to suppress innate and adaptive immunities, ultimately weaking the ability of larvae to defend against pathogenic infection. PFDA-induced immunotoxicity was driven by a dysregulation in the toll-like receptor (TLR) signaling pathway, which was validated through a cotreatment of PFDA with either a morpholino knockdown or inhibitor of myeloid differentiation factor 88. Comparative toxicity studies were carried out with a subset of other alternative PFAS (PFBA, PFOA, PFNA) and it was found that PFDA posed a greater immunotoxic response than other commonly identified PFAS in the environment. This work identified a major target of PFDA, disrupting immune function through the TLR signaling pathway, while inducing a greater toxic response among other tested PFAS, which provides novel insights into understanding the potential environmental risks of PFAS substitutes.

Environmental Science & Technology↗
USGS2019

Flood-inundation maps of the Meramec River from Eureka to Arnold, Missouri, 2018

Libraries of digital flood-inundation maps that spanned a combined 37.2-mile reach of the Meramec River that extended upstream from Eureka, Missouri, to downstream near the confluence of the Meramec and Mississippi Rivers were created by the U.S. Geological Survey (USGS) in cooperation with the U.S. Army Corps of Engineers, Metropolitan St. Louis Sewer District, Missouri Department of Transportation, Missouri American Water, Federal Emergency Management Agency Region 7, and the cities of Pacific, Eureka, Wildwood, and Arnold. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science website at https://water.usgs.gov/osw/flood_inundation/ , depict estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) at the cooperative USGS streamgages for the Meramec River near Eureka, Mo. (USGS station 07019000), the Meramec River at Valley Park, Mo. (USGS station 07019130), the Meramec River at Fenton, Mo. (USGS station 07019210), and the Meramec River at Arnold, Mo. (USGS station 07019300). Near-real-time stage data at these streamgages may be obtained from the USGS National Water Information System at https://doi.org/10.5066/F7P55KJN or the National Weather Service (NWS) Advanced Hydrologic Prediction Service at https://water.weather.gov/ahps/ , which also forecasts flood hydrographs at these sites (listed as NWS sites erkm7, vllm7, fnnm7, and arnm7, respectively). Flood profiles were computed for the stream reach by means of a calibrated one-dimensional step-backwater hydraulic model. The model was calibrated using a stage-discharge relation at the Meramec River near Eureka, Mo., streamgage (USGS station 07019000) and documented high-water marks from the flood of December 2015 through January 2016. The calibrated hydraulic model was used to compute water-surface profiles: 1 set for the Meramec River near Eureka, Mo., streamgage (USGS station 07019000); 1 set for the Meramec River at Valley Park, Mo., streamgage (USGS station 07019130); 7 sets for the Meramec River at Fenton, Mo., streamgage (USGS station 07019210) for a range of Mississippi River conditions; and 8 sets for the Meramec River at Arnold, Mo., streamgage (USGS station 07019300) for a range of Mississippi River conditions. The water-surface profiles were produced for stages at 1-foot (ft) intervals referenced to the datum from each streamgage and ranging from the NWS action stage, or near bankfull discharge, to the stage corresponding to the estimated 0.2-percent annual exceedance probability (500-year recurrence interval) flood, as determined at the Meramec River near Eureka, Mo., streamgage (USGS station 07019000). The simulated water-surface profiles then were combined with a geographic information system digital elevation model (derived from light detection and ranging data having a 0.28-ft vertical accuracy and 3.28-ft horizontal resolution) to delineate the area flooded at each simulated 1-ft stage increment. Previously published flood-inundation maps were updated and incorporated in the flood map libraries for USGS stations 07019130 and 07019210 to complete the map sets corresponding to eight Mississippi River conditions. The availability of these maps, along with internet information regarding current stage from the USGS streamgages and forecasted high-flow stages from the NWS, will provide emergency management personnel and residents with information that is critical for flood response activities such as evacuations and road closures and for postflood recovery efforts.

Missouri↗
USGS2019

Context matters: Using reinforcement learning to develop human-readable, state-dependent outbreak response policies

The number of all possible epidemics of a given infectious disease that could occur on a given landscape is large for systems of real-world complexity. Furthermore, there is no guarantee that the control actions that are optimal, on average, over all possible epidemics are also best for each possible epidemic. Reinforcement learning (RL) has been used to develop machine-readable context-dependent solutions for complex problems with many possible realisations ranging from video-games to the game of Go. RL could be a valuable tool to generate context-dependent policies for outbreak response, though translating the resulting policies into simple rules that can be read and interpreted by human decision-makers remains a challenge. Here we illustrate the application of RL to the development of context-dependent outbreak response policies to minimise outbreaks of foot-and-mouth disease. We show that control based on the resulting context-dependent policies, which adapt interventions to the specific outbreak, result in smaller outbreaks than static policies. We further illustrate two approaches for translating the complex machine-readable policies into simple heuristics that can be evaluated by human decision-makers.

Philosophical Transactions of the Royal Society B:↗
USGS2011

U.S. Geological Survey Science for the Wyoming Landscape Conservation Initiative-2010 Annual Report

This is the third report produced by the U.S. Geological Survey (USGS) for the Wyoming Landscape Conservation Initiative (WLCI) to detail annual work activities. The first report described activities for 2007 and 2008, and the second report covered work activities for FY09. This third report covers work activities conducted in FY2010, and it continues the 2009 approach of reporting on all the individual activities to help give WLCI partners and other readers the full scope of what has been accomplished. New in this year's report is an additional section for each work activity that outlines the work planned for the following fiscal year. In FY2010, there were 35 ongoing/expanded, completed, or new projects conducted under the five major multi-disciplinary science and technical-assistance activities: (1) Baseline Synthesis; (2) Targeted Monitoring and Research; (3) Data and Information Management; (4) Integration and Coordination; and (5) Decisionmaking and Evaluation. The three new work activities were to (1) compile existing water data for the entire WLCI region and (2) develop regional curves (statistical models) for relating bankfull-channel geometry and discharge to drainages in the WLCI region, both of which will help guide long-term monitoring of water resources; and (3) initiate a groundwater-monitoring network to evaluate potential effects of energy-development activities on groundwater quality where groundwater is an important source of public/private water supplies. Results of the FY2009 work to develop methods for assessing soil organic matter and mercury indicated that selenium and arsenic levels may be elevated in the Muddy Creek Basin; thus, the focus of that activity was shifted in FY2010 to evaluate biogeochemical cycling of elements in the basin. In FY2010, two ongoing activities were expanded with the addition of more sampling plots: (a) the study of how greater sage-grouse (Centrocercus urophasianus) use vegetation-treatment areas (sites added to the Moxa Arch Natural Gas Development area) and (2) the study of cheatgrass (Bromus tectorum) occurrence in burn treatments of the Little Mountain Ecosystem. The activity that entails evaluating relationships between ungulate herbivory and fire on aspen (Populus tremuloides) recruitment also was expanded to include relationships between stand characteristics of and herbivory on aspen in various ecohydrological settings. The USGS continued compiling data and developing geospatial products from all of its WLCI activities to support (1) ranking and prioritizing of proposed conservation projects, (2) developing the WLCI Integrated Assessment, and (3) developing the WLCI 5-year Conservation Action Plan. Two activities were completed in FY2010: (1) the conceptual modeling and indicator selection for monitoring resource conditions across the WLCI region, and (2) the literature review on effects of oil and gas development in western regions of the United States, both of which are in the last stages of publication.

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