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At least 667 records · Page 37Linked to original sources
USGS2014

Applications of spatial statistical network models to stream data

Streams and rivers host a significant portion of Earth's biodiversity and provide important ecosystem services for human populations. Accurate information regarding the status and trends of stream resources is vital for their effective conservation and management. Most statistical techniques applied to data measured on stream networks were developed for terrestrial applications and are not optimized for streams. A new class of spatial statistical model, based on valid covariance structures for stream networks, can be used with many common types of stream data (e.g., water quality attributes, habitat conditions, biological surveys) through application of appropriate distributions (e.g., Gaussian, binomial, Poisson). The spatial statistical network models account for spatial autocorrelation (i.e., nonindependence) among measurements, which allows their application to databases with clustered measurement locations. Large amounts of stream data exist in many areas where spatial statistical analyses could be used to develop novel insights, improve predictions at unsampled sites, and aid in the design of efficient monitoring strategies at relatively low cost. We review the topic of spatial autocorrelation and its effects on statistical inference, demonstrate the use of spatial statistics with stream datasets relevant to common research and management questions, and discuss additional applications and development potential for spatial statistics on stream networks. Free software for implementing the spatial statistical network models has been developed that enables custom applications with many stream databases.

WIREs Water↗
USGS2022

Climate change adaptation thinking for managed wetlands

Climate change presents new and ongoing challenges to natural resource management. To confront these challenges effectively, managers need to develop proactive adaptation strategies to prepare for and deal with the effects of climate change. We engaged managers and biologists from several midwestern U.S. Fish and Wildlife Service field stations to understand recent and future climate change effects, identify adaptation barriers and opportunities, and pilot an approach for integrating adaptation thinking into management planning. To start, three structured discussions informed our understanding of how managers currently deal with climate change effects, the strategies being implemented to cope, and the barriers that limit climate change adaptation efforts. We used these insights to develop a multiday virtual workshop geared toward identifying potential adaptation strategies for managed wetlands. First, we developed a conceptual model to visualize how management actions are used to meet habitat objectives within wetland management systems. Next, we discussed how climate change may affect management actions and objectives; we used this understanding of potential effects to spatially assess vulnerability of managed wetlands to climate change. Using a scenario planning approach, we incorporated multiple potential future conditions and identified effects and adaptation strategies that could be considered for each scenario. As a result, several adaptation strategies for managed wetlands under dry and wet future scenarios were identified that can be applied when developing site-specific adaptation plans. Based on our piloted approach, we determined it would be important to have an adaptation team composed of scientists and managers to facilitate discussions, develop appropriate scenarios, and identify realistic adaptation options. We document the tools, findings, and adaptation thinking process taken to enhance adaptation efforts of managed wetlands. The adaptation thinking process can be applied to advance adaptation efforts in other habitats, ecosystems, and site-specific land management.

Open-File Report↗
USGS2022

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2021 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018; Winkler et al. 2018; McCormick et al. 2021). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. The U.S. Geological Survey (USGS) Southwest Biological Science Center’s (SBSC’s) research activities to support CPNPP in FY21 followed the FY21 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance 2015), Biden-Harris Administration Executive Order 14008 (Tackling the Climate Crisis at Home and Abroad), and Department of Interior Priority #4 (Working to conserve at least 30% each of our lands and waters by the year 2030). Research activities in FY21 centered on landscape genomics, implementing and monitoring a common garden experiment near Vernal, UT, conducting experimental treatments using the GRID (Germination for Restoration Information and Decision-making) framework, and initiating new genetics projects to investigate the impact of production techniques on plant materials and restoration treatments on native plant communities. These activities were supported by four biological science technicians. The SARS-CoV-2 pandemic delayed some aspects of the FY21 workplan, especially for outside laboratory services. However, goals were largely met, and the overall progress of research remains on track with respect to the 5-year plan. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY21, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, and Daniel Winkler, spent a considerable amount of time providing expertise and support for individual projects. Work activities performed in support of each 5-year plan goal are discussed in turn. Products resulting from FY21 research activities are reported in Appendix 1.

Arizona, Colorado, New Mexico, Utah↗
USGS1987

Habitat Suitability Index Models: American alligator

A review and synthesis of existing information were used to develop a model for evaluating American alligator habitat quality. The model is applicable in marshes along the northern Gulf of Mexico. It is scaled to produce an index between 0 (unsuitable habitat) and 1.0 (optimal habitat). Habitat suitability index models are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for model application and techniques for measuring model variables are described.

FWS/OBS↗
USGS1985

Habitat Suitability Index Models: Laughing gull

A review and synthesis of existing information were used to develop a habitat model for laughing gull (Larus atricilla). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1.0 (optimally suitable habitat) for areas along the Gulf of Mexico coast. Habitat suitability indices are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for application of the model and techniques for measuring model variables are described.

FWS/OBS↗
USGS1979

A bibliography of references to avian cholera

Mrs. Wilson has made a genuine effort to include in this bibliography every significant reference to avian cholera since Louis Pasteur's articles appeared in 1880, although she recognizes the likelihood that a few have been overlooked. New listings have been added throughout 1978, but comprehensive coverage of the literature cannot be claimed beyond June of that year. Textbook accounts, because they are generally summaries of work published elsewhere, are excluded. Papers dealing primarily with the biology of Pasteurella multocida , as opposed to the disease it induces in birds, are also excluded, unless they report information of diagnostic usefulness. Short abstracts are not included unless the journals in which they are published are more widely available than those in which the complete articles appear or they are English summaries of foreign language articles. In compiling this bibliography, Mrs. Wilson has made extensive use of Biological Abstracts, the Pesticide Documentation Bulletin, and printouts generated by Bibliographic Retrieval Services, Inc. The "Literature Cited" sections of textbooks and journal articles pertinent to the subject were sources of many additional references. Regardless of the origin of the citation, its accuracy was confirmed by comparison with the original publication, except in those few instances (marked with an asterisk) when the journal was not on the shelves of the libraries accessible to us. The author will be grateful to users of the bibliography who point out errors or omissions. Wayne I. Jensen Microbiologist In Charge

Special Scientific Report - Wildlife↗
USGS2020

Linking land and sea through an ecological-economic model of coral reef recreation

Coastal zones are popular recreational areas that substantially contribute to social welfare. Managers can use information about specific environmental features that people value, and how these might change under different management scenarios, to spatially target actions to areas of high current or potential value. We explored how snorkelers’ experience would be affected by separate and combined land and marine management actions in West Maui, Hawaiʻi, using a Bayesian Belief Network (BBN) and a spatially explicit ecosystem services model. The BBN simulates the attractiveness of a site for recreation by combining snorkeler preferences for coastal features with expert opinions on ecological dynamics, snorkeler behavior, and management actions. A choice experiment with snorkelers elucidated their preferences for sites with better ecological and water-quality conditions. Linking the economic elicitation to the spatially explicit BBN to evaluate land-sea management scenarios provides specific guidance on where and how to act in West Maui to maximize ecosystem service returns. Improving coastal water quality through sediment runoff and cesspool effluent reductions (land management), and enhancing coral reef ecosystem conditions (marine management) positively affected overall snorkeling attractiveness across the study area, but with differential results at specific sites. The highest improvements were attained through joint land-sea management, driven by strong efforts to increase fish abundance and reduced sediment; however, the effects of management at individual beaches varied.

Hawaii↗
USGS2020

Strategic Plan for the North American Breeding Bird Survey, 2020–30

The North American Breeding Bird Survey (BBS) has been the cornerstone of continental bird conservation and management for hundreds of North American bird species in the United States and Canada for more than 50 years. This strategic plan was developed in collaboration with key partners and stakeholders and charts the ambitious course for the BBS over the next decade (2020–30). Using this plan as a guide, the BBS program will set out to improve the breadth and depth of standardized data collection and analytical products; ensure its products are widely used and recognized as the authoritative source for long-term population change information for most birds; and secure adequate resources, internally and through partnerships, to realize the expanded vision of the BBS intended to support avian management needs through 2030.

Circular↗
USGS2008

Elevation Derivatives for Mojave Desert Tortoise Habitat

This report describes the methods used to derive various elevation-derivative grids that were inputted to the Mojave Desert Tortoise Habitat model (L. Gass and others, unpub. data). These grids, which capture information on surface roughness and topographic characteristics, are a subset of the environmental datasets evaluated for the tortoise habitat model. This habitat model is of major importance to the U.S. Fish and Wildlife Service, which is charged with management of this threatened population, including relocating displaced tortoises to areas identified as suitable habitat.

Open-File Report↗
USGS2013

Changes in nitrogen loading to the Northeast Creek Estuary, Bar Harbor, Maine, 2000 to 2010

Since 1999, the U.S. Geological Survey and the National Park Service have been monitoring land use and nitrogen loading in a 26.3-square-kilometer (10-square-mile) estuarine watershed at Acadia National Park, Mount Desert Island, Maine. The initial study linking land use and nitrogen loads entering the Northeast Creek estuary was completed in 2000, and findings were used to develop simulations of nitrogen loading to the estuary, thereby helping to inform local land-use planning decisions. At that time, the amount of nitrogen entering the Northeast Creek estuary was relatively small, and no evidence of nutrient-related degradation was observed in the Ruppia -dominated estuarine ecosystem. A new round of water-quality monitoring and streamflow measurements was conducted to determine nitrogen loading from 2008 to 2011 as a means to evaluate the effects of increased rural residential housing within the watershed since 2000. On the basis of a 2.6-percent increase in residential-housing land use in the watershed from 2000 to 2010, simulations of nitrogen export predicted a 7-percent increase in nitrogen loading to Northeast Creek. The measurement-based loads estimated for the Northeast Creek tributaries, however, increased much more than predicted, from 1.89 kilograms per hectare per year (kg/ha/yr) in 2000 to 3.12 kg/ha/yr in the time period centered on 2010—a 66-percent increase. This increase is likely primarily a result of the prevalence of much wetter conditions during the 2008–11 sampling period than during the earlier sampling period. In addition to increasing the physical transport of nitrogen in the watershed, wet climatic conditions have been shown in other studies to increase the rates of biotic and abiotic processes that control nitrogen export from northern-latitude forested watersheds. The new loading estimates, however, also support the possibility that some portion of the increase in nitrogen loading results from the observed land-use changes, and that the increase in residential housing has, in fact, contributed to the observed increase in nitrogen loading.

Maine↗
USGS1983

The role of the USFWS geographic information system in coastal decisionmaking

Unprecedented demand on coastal resources in the 1980's has generated a need for valid information and analyses to support wise management of the coastal zone. The National Coastal Ecosystems Team of the U.S. Fish and Wildlife Service recently implemented a geographic information system to enhance its ability to analyze and display environmental information about the coastal zone. Outputs from this system have been presented to the State of Louisiana Senate and House Committees on Natural Resources and to the Congressional House of Representatives Committee on Merchant Marine and Fisheries. The purpose of this paper is to describe the use of the Map Overlay Statistical System for addressing selected coastal issues and to discuss its utility for coastal decisionmaking.

Alabama, Florida, Louisiana, Mississippi, Texas↗
USGS1982

Habitat Suitability Index Models: Juvenile spot

A review and synthesis of existing information were used to develop estuarine habitat models for juvenile spot (Leiostomus xanthurus). The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Guideline for juvenile spot model applications and techniques for estimating model variables are described.

FWS/OBS↗
USGS1983

Habitat Suitability Index Models: Black-capped chickadee

A review and synthesis of existing information was used to develop a habitat model for the black-capped chickadee (Parus atricapillus). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for areas of the continental United States. Habitat suitability indexes are designed for use with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

FWS/OBS↗
USGS2014

An analysis of the potential for Glen Canyon Dam releases to inundate archaeological sites in the Grand Canyon, Arizona

The development of a one-dimensional flow-routing model for the Colorado River between Lees Ferry and Diamond Creek, Arizona in 2008 provided a potentially useful tool for assessing the degree to which varying discharges from Glen Canyon Dam may inundate terrestrial environments and potentially affect resources located within the zone of inundation. Using outputs from the model, a geographic information system analysis was completed to evaluate the degree to which flows from Glen Canyon Dam might inundate archaeological sites located along the Colorado River in the Grand Canyon. The analysis indicates that between 4 and 19 sites could be partially inundated by flows released from Glen Canyon Dam under current (2014) operating guidelines, and as many as 82 archaeological sites may have been inundated to varying degrees by uncontrolled high flows released in June 1983. Additionally, the analysis indicates that more of the sites currently (2014) proposed for active management by the National Park Service are located at low elevations and, therefore, tend to be more susceptible to potential inundation effects than sites not currently (2014) targeted for management actions, although the potential for inundation occurs in both groups of sites. Because of several potential sources of error and uncertainty associated with the model and with limitations of the archaeological data used in this analysis, the results are not unequivocal. These caveats, along with the fact that dam-related impacts can involve more than surface-inundation effects, suggest that the results of this analysis should be used with caution to infer potential effects of Glen Canyon Dam on archaeological sites in the Grand Canyon.

Arizona↗
USGS2010

Geospatial Information Response Team

Extreme emergency events of national significance that include manmade and natural disasters seem to have become more frequent during the past two decades. The Nation is becoming more resilient to these emergencies through better preparedness, reduced duplication, and establishing better communications so every response and recovery effort saves lives and mitigates the long-term social and economic impacts on the Nation. The National Response Framework (NRF) (http://www.fema.gov/NRF) was developed to provide the guiding principles that enable all response partners to prepare for and provide a unified national response to disasters and emergencies. The NRF provides five key principles for better preparation, coordination, and response: 1) engaged partnerships, 2) a tiered response, 3) scalable, flexible, and adaptable operations, 4) unity of effort, and 5) readiness to act. The NRF also describes how communities, tribes, States, Federal Government, privatesector, and non-governmental partners apply these principles for a coordinated, effective national response. The U.S. Geological Survey (USGS) has adopted the NRF doctrine by establishing several earth-sciences, discipline-level teams to ensure that USGS science, data, and individual expertise are readily available during emergencies. The Geospatial Information Response Team (GIRT) is one of these teams. The USGS established the GIRT to facilitate the effective collection, storage, and dissemination of geospatial data information and products during an emergency. The GIRT ensures that timely geospatial data are available for use by emergency responders, land and resource managers, and for scientific analysis. In an emergency and response capacity, the GIRT is responsible for establishing procedures for geospatial data acquisition, processing, and archiving; discovery, access, and delivery of data; anticipating geospatial needs; and providing coordinated products and services utilizing the USGS' exceptional pool of geospatial experts and equipment.

Fact Sheet↗
USGS2012

Social values for ecosystem services (SolVES): Documentation and user manual, version 2.0

In response to the need for incorporating quantified and spatially explicit measures of social values into ecosystem services assessments, the Rocky Mountain Geographic Science Center (RMGSC), in collaboration with Colorado State University, developed a geographic information system (GIS) application, Social Values for Ecosystem Services (SolVES). With version 2.0 (SolVES 2.0), RMGSC has improved and extended the functionality of SolVES, which was designed to assess, map, and quantify the perceived social values of ecosystem services. Social values such as aesthetics, biodiversity, and recreation can be evaluated for various stakeholder groups as distinguished by their attitudes and preferences regarding public uses, such as motorized recreation and logging. As with the previous version, SolVES 2.0 derives a quantitative, 10-point, social-values metric, the Value Index, from a combination of spatial and nonspatial responses to public attitude and preference surveys and calculates metrics characterizing the underlying environment, such as average distance to water and dominant landcover. Additionally, SolVES 2.0 integrates Maxent maximum entropy modeling software to generate more complete social value maps and to produce robust statistical models describing the relationship between the social values maps and explanatory environmental variables. The performance of these models can be evaluated for a primary study area, as well as for similar areas where primary survey data are not available but where social value mapping could potentially be completed using value-transfer methodology. SolVES 2.0 also introduces the flexibility for users to define their own social values and public uses, model any number and type of environmental variable, and modify the spatial resolution of analysis. With these enhancements, SolVES 2.0 provides an improved public domain tool for decisionmakers and researchers to evaluate the social values of ecosystem services and to facilitate discussions among diverse stakeholders regarding the tradeoffs among different ecosystem services in a variety of physical and social contexts ranging from forest and rangeland to coastal and marine.

Open-File Report↗
USGS2026

Environmental DNA pilot monitoring program for invasive species and biodiversity assessments on Santa Cruz Island: Interim report, September 2025

The U.S. Geological Survey (USGS) and Southern California Coastal Water Research Project supported Channel Islands National Park, The Nature Conservancy’s (TNC) Santa Cruz Island Preserve, and University of California San Diego (UCSD) researchers in using environmental DNA sampling to monitor for invasive Argentine ant ( Linepithema humile ) and to describe spatial biodiversity patterns in a freshwater stream on Santa Cruz Island that is colloquially known as Cañada del Puerto Creek (hydrologic unit code 12 number 180600140201). An eDNA autosampler was deployed May 27–June 02, 2025, which filtered and preserved four 2-L water samples every 12 hours (n = 48 samples). These samples were extracted by USGS and shipped to UCSD for targeted eDNA analyses of Argentine ant. Environmental DNA sampling kits were used to filter and preserve water samples at four sites along the creek spanning ~ 5 km of stream distance. Six 1-L samples were collected at each site May 27–28 and samples were analyzed for eDNA metabarcoding using a comprehensive panel, which encompasses species across the tree of life. In these samples, eDNA from 2,134 unique taxa spanning 30 taxonomic groups (e.g., amoebas, insects, plants) were found. These sampling efforts demonstrated how eDNA autonomous and manual sampling approaches can be applied by National Park Service, TNC, and partners at scale to provide otherwise difficult and expensive to acquire information about biological threats and biodiversity.

California↗
USGS1984

Habitat Suitability Index Models: Larval and juvenile red drum

A review and synthesis of existing information were used to develop a habitat model for larval and juvenile red drum. The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for estuarine areas along the Gulf of Mexico and Atlantic coasts. Habitat suitability indices are designed for use with habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Guidelines for model application and techniques for estimating model variables are provided.

FWS/OBS↗