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At least 649 records · Page 36Linked to original sources

USGS2025

Living with uncertainty: Using multi-model large ensembles to assess emperor penguin extinction risk for the IUCN Red List

Improved methods for identifying species at risk are needed to strengthen climate change vulnerability assessments, as current estimates indicate that up to one million species face extinction due to environmental changes. Integrating multiple sources of uncertainty enhances the robustness of Red List of Threatened Species assessments, providing a more comprehensive understanding of species’ risks. We present a comprehensive framework that incorporates uncertainties, including measurement error, structural uncertainty, natural variability, future climate emissions scenario, and extreme events of sea ice loss, to evaluate the extinction risk of the emperor penguin ( Aptenodytes forsteri ), currently classified as Near-Threatened. We apply three ecological models, one bioclimatic and two metapopulation models, combined with a multi-model large ensemble (MMLE) of climate projections from general circulation models, to conduct a Red List evaluation at both global, regional and colony levels. Our results show that emperor penguins could be classified under a range of Red List categories depending on the ecological model, Intergovernmental Panel on Climate Change (IPCC) climate emissions scenario, and extreme event frequency. Under Criterion A, global classifications vary from Vulnerable to Critically Endangered. Severe declines are projected in the Indian and East Pacific sectors, Dronning Maud Land and the Amundsen-Bellingshausen Sea, with Criterion E indicating that 24% to 100% of colonies meet Endangered status thresholds, depending on huddling thresholds and ecological models. This study represents the first application of an MMLE coupled with an ecological ensemble approach to project climate change impacts on a species, capturing a comprehensive range of uncertainties and offering a framework for improving forecasting and decision-making under climate change.

Biological Conservation↗

USGS2000

An evaluation of restoration efforts in fishless lakes stocked with exotic trout

Detrimental effects of introduced fishes on native amphibian populations have prompted removal of introduced cutthroat (Oncorhynchus clarki), rainbow (Oncorhynchus mykiss), and brook trout (Salvelinus fontinalis) from naturally fishless lakes at Mt. Rainier National Park, Washington (U.S.A.). Using paleolimnological indicators (diatoms, invertebrates, and sediment characteristics) in eight 480-year-old sediment cores from eight lakes, we (1) derived estimates of baseline environmental conditions and natural variation, (2) assessed the effects of stocking naturally fishless lakes, and (3) determined whether lakes returned to predisturbance conditions after fish removal (restoration). Diatom floras were relatively stable between 315 and 90 years before present in all lakes; we used this time period to define lake-specific "baseline" conditions. Dissimilarity analyses of diatoms revealed sustained, dramatic changes in diatom floras that occurred approximately 80 years ago (when fish were introduced) in four of five stocked lakes, whereas the diatom floras in two unstocked lakes had not changed significantly in the last 315 years. Diatoms were not preserved in an eighth lake. State changes also occurred in two lakes over 200 years before European settlement of the Pacific Northwest. Preserved invertebrate densities fluctuated dramatically over time in all cores, providing a poor reference for assessing the effects of fishes. Nevertheless, fish-invertebrate interactions have been demonstrated in other paleolimnological studies and may be useful for lower-elevation or more productive lakes. Because diatom communities have not returned to predisturbance assemblages in restored lakes, even 20-30 years after fish removal, we conclude that Mt. Rainier lakes were not successfully restored by the removal of fishes.

Conservation Biology↗

USGS2015

Piscine reovirus, but not Jaundice Syndrome, was transmissible to Chinook Salmon, Oncorhynchus tshawytscha (Walbaum), Sockeye Salmon, Oncorhynchus nerka (Walbaum), and Atlantic Salmon, Salmo salar L.

A Jaundice Syndrome occurs sporadically among sea-pen-farmed Chinook Salmon in British Columbia, the westernmost province of Canada. Affected salmon are easily identified by a distinctive yellow discolouration of the abdominal and periorbital regions. Through traditional diagnostics, no bacterial or viral agents were cultured from tissues of jaundiced Chinook Salmon; however, piscine reovirus (PRV) was identified via RT-rPCR in all 10 affected fish sampled. By histopathology, Jaundice Syndrome is an acute to peracute systemic disease, and the time from first clinical signs to death is likely <48 h; renal tubular epithelial cell necrosis is the most consistent lesion. In an infectivity trial, Chinook Salmon, Sockeye Salmon and Atlantic Salmon, intraperitoneally inoculated with a PRV-positive organ homogenate from jaundiced Chinook Salmon, developed no gross or microscopic evidence of jaundice despite persistence of PRV for the 5-month holding period. The results from this study demonstrate that the Jaundice Syndrome was not transmissible by injection of material from infected fish and that PRV was not the sole aetiological factor for the condition. Additionally, these findings showed the Pacific coast strain of PRV, while transmissible, was of low pathogenicity for Atlantic Salmon, Chinook Salmon and Sockeye Salmon.

British Columbia↗

USGS2016

Interacting effects of latitude, mass, age, and sex on winter survival of Surf Scoters ( Melanitta perspicillata ): Implications for differential migration

We quantified variation in winter survival of Surf Scoters ( Melanitta perspicillata (L., 1758)) across nearly 30° of latitude on the Pacific coast of North America to evaluate potential effects on winter distributions, including observed differential distributions of age and sex classes. We monitored fates of 297 radio-marked Surf Scoters at three study sites: (1) near the northern periphery of their wintering range in southeast Alaska, USA, (2) the range core in British Columbia, Canada, and (3) the southern periphery in Baja California, Mexico. We detected 34 mortalities and determined that survival averaged lower at the range peripheries than in the range core, was lower during mid-winter than during late winter at all sites, and was positively correlated with body mass within locations. Although neither age nor sex class had direct effects, mass effects led to differential survival patterns among classes. When simultaneously incorporating these interacting influences, adult males of mean mass for their location had highest survival at the northern range periphery in Alaska, whereas adult females and juveniles had higher survival at the range core and the southern periphery. Our observations help to explain patterns of differential migration and distribution reported for this species and highlight seasonal periods (mid-winter) and locations (range peripheries) of elevated levels of mortality for demographically important age–sex classes (adult females).

Baja California, southeast Alaska, Strait of Georg↗

USGS2005

Rediscovery and uncertain future of high-elevation Haleakala carabid beetles (Coleoptera)

Recent biotic surveys in subalpine shrubland on Haleakalā Volcano, Maui, Hawai'i, have resulted in rediscovery of several species of carabid beetles previously known only from their nineteenth-century type specimens. Blackburnia lenta (Sharp), described from specimens collected just below Haleakalā summit in 1894, was found at lower elevational sites ranging from 2,400 to 2,750 m. Mecyclothorax rusticus Sharp, last seen in 1896, and M. nubicola (Blackburn), collected only in 1878, were also rediscovered in that vicinity. Recent collections of B. lenta contradict the U.S. Fish and Wildlife Service's previous classification of this species as one likely to be extinct. Nevertheless, B. lenta's known distribution comprises only 145 ha within an elevational zone that is bounded above and below by unicolonial populations of the invasive alien Argentine ant, Linepithema humile (Mayr). The known recent collections of M. rusticus and M. nubicola also occurred outside the distributional range of the Argentine ant. Mature eggs held in the lateral oviducts of B. lenta females averaged 1.4x the volume of the largest eggs previously reported among 13 species of Blackburnia. We hypothesize that the giant eggs of B. lenta result from selective forces favoring large, well-nourished developing and hatched first-instar larvae, consistent with a patchy distribution of suitable microhabitat and prey in the subalpine Haleakalā landscape. The specialized life history of B. lenta, and coincidence of distributional limits of the three rediscovered carabid species with range limits of the Argentine ant populations suggest that all would be jeopardized by future distributional expansion of Argentine ant. These intersecting phenomena compel us to conclude that B. lenta, M. nubicola, and M. nubicola are appropriate candidates for I.U.C.N. threatened species designation, pending further studies of their geographic ranges and historical trends in abundance.

Hawaii↗

USGS1950

Raccoons of North and Middle America

The raccoons, genus Procyon, colloquially known as “coons,” belong to the carnivorous family Procyonidae, which also includes the American genera Nasua, Nasuella, Bassaricyon, and Potos, and the Old World genera Ailurus and Ailuropoda of the subfamily Ailurinae. The members of the Procyon lotor group (subgenus Procyon), with a transcontinental range from southern Canada to Panama, except in parts of the Rocky Mountain region, and including those inhabiting several distant islands, are among the most familiar and characteristic of North American mammals. This group is not known to occur south of Panama. It is overlapped in the Isthmian region by the so-called crab-eating raccoons of the subgenus Euprocyon, which range from that northern limit as far south as Paraguay in South America. The raccoons have been greatly reduced in numbers or have disappeared in many formerly wooded sections, owing to clearing and intensive human occupation. Despite adverse conditions, however, they have maintained themselves in many places with remarkable tenacity. Trapping for other fur bearers may have reduced the northern fringe to some extent, but the general range of the group has been little diminished. At the present time raccoons reach their northern limit in regular occurrence on Vancouver Island, B. C. The continental forms of the subgenus Procyon constitute a compact assemblage of closely allied geographic races all assignable to Procyon lotor. Complete intergradation is evident in numerous cases and the relative value and combination of characters presented indicate such close relationships that it can safely be assumed where lack of material leaves gaps in the known ranges. In the present revision of the raccoons are treated the North American continental species as far as the eastern border of Panama and the species on outlying islands along both the Atlantic and the Pacific coasts. Thirty species and subspccics are recognized. Twenty-nine of these are assigned to the subgenus Procyon and one to the subgenus Euproc yon. The revision is based mainly on a study of raccoon material in the collection of Biological Surveys, Fish and Wildlife Service, and in other collections in the United States National Museum. These and 358 specimens borrowed from other museums make a total of 1,337 examined. The assemblage included the types or topotypes of most of the known species and subspecies. For the loan of specimens the writer is especially indebted to Dr. Thomas Barbour, Museum of Comparative Zoology, Cambridge, Mass. ; the late Dr. Joseph Grinnell, Museum of Vertebrate Zoology, Berkeley, Calif.; Dr. W. H. Osgood, Chicago Natural History Museum, Chicago, Ill.; Dr. H. E. Anthony, American Museum of Natural History, New York City; Dr. R. M. Anderson, National Museum of Canada, Ottawa, Canada; the late Oldfield Thomas of the British Museum (Natural History) ; Francis Kermode, Provincial Museum, Vancouver, British Columbia; Dr. L. R. Dice, Museum of Zoology, University of Michigan, Ann Arbor, Mich.; and the late D. R. Dickey, Pasadena, Calif. Grateful acknowledgment is also due to Percy Shufeldt, La Cueva, N. Vex., for the generous donation of specimens collected by him in Campeche, Mexico. Notes on his examination of specimens in the British Museum have been kindly furnished by Dr. Remington Kellogg, United States National Museum, Washington, D. C. Stanley P. Young, Fish and Wildlife Service, Washington, D. C., generously supplied the photograph for the frontispiece. Dr. E. W. Nelson became keenly interested in the raccoons, as shown by his work on those inhabiting the Florida Keys (1930a).' During the same time and in the following year new subspecies were described jointly by Nelson and the writer in preparation for a revision of the group; but other projects claimed attention and our collaboration could not be carried beyond this preliminary stage

North American Fauna↗

USGS2024

Reduction in overwinter body condition and size of Pacific sand lance has implications for piscivorous predators during marine heatwaves

Acute anomalous ocean warming events, including marine heatwaves (MHWs), have significant effects on reproduction and survival of piscivorous seabirds. Additionally, MHWs have negative effects on seabird fish prey, exacerbating these consequences and resulting in population implications for seabirds. We evaluated the relative body condition of Pacific sand lance Ammodytes personatus , an important seabird forage species, in Haro Strait, a highly productive region of southern British Columbia, Canada. We compared body condition and length of fish cohorts that experienced the 2016 MHW year (MHW cohorts) with fish hatched during 3 subsequent post MHW years (2017-2019). Age-0 MHW cohorts had a seasonal decline in body condition in age-0 fish from 100% in the summer to 81% in the winter, while age-1 fish showed a decline from summer-fall highs of 93.5% to wintertime low of 79.5%. In comparison, post MHW cohorts had a winter body condition that was 2-4 times higher than their MHW cohorts. Similar to previous studies in Alaska during the MHW, age-1 fish failed to grow and reach the typical size that distinguishes them from age-0 fish. Poor sand lance condition and growth in winter may explain the ramifications of a warming ocean for top predators, including seabirds and Pacific salmon, which depend on these prey fish in Haro Strait. Our results support the idea that Haro Strait, which is influenced by estuarine circulation resulting in cooler temperatures than surrounding areas, serves as a climate refugium for sand lance populations in summer and provides buffering capacity to ocean climate warming events.

Marine Ecology Progress Series↗

USGS2012

Preliminary assessment of channel stability and bed-material transport in the Tillamook Bay tributaries and Nehalem River basin, northwestern Oregon

This report summarizes a preliminary study of bed-material transport, vertical and lateral channel changes, and existing datasets for the Tillamook (drainage area 156 square kilometers [km 2 ]), Trask (451 km 2 ), Wilson (500 km 2 ), Kilchis (169 km 2 ), Miami (94 km 2 ), and Nehalem (2,207 km 2 ) Rivers along the northwestern Oregon coast. This study, conducted in coopera-tion with the U.S. Army Corps of Engineers and Oregon Department of State Lands to inform permitting decisions regarding instream gravel mining, revealed that: Study areas along the six rivers can be divided into reaches based on tidal influence and topography. The fluvial (nontidal or dominated by riverine processes) reaches vary in length (2.4-9.3 kilometer [km]), gradient (0.0011-0.0075 meter of elevation change per meter of channel length [m/m]), and bed-material composition (a mixture of alluvium and intermittent bedrock outcrops to predominately alluvium). In fluvial reaches, unit bar area (square meter of bar area per meter of channel length [m 2 /m]) as mapped from 2009 photographs ranged from 7.1 m 2 /m on the Tillamook River to 27.9 m 2 /m on the Miami River. In tidal reaches, all six rivers flow over alluvial deposits, but have varying gradients (0.0001-0.0013 m/m) and lengths affected by tide (1.3-24.6 km). The Miami River has the steepest and shortest tidal reach and the Nehalem River has the flattest and longest tidal reach. Bars in the tidal reaches are generally composed of sand and mud. Unit bar area was greatest in the Tidal Nehalem Reach, where extensive mud flats flank the lower channel. Background factors such as valley and channel confinement, basin geology, channel slope, and tidal extent control the spatial variation in the accumulation and texture of bed material. Presently, the Upper Fluvial Wilson and Miami Reaches and Fluvial Nehalem Reach have the greatest abundance of gravel bars, likely owing to local bed-material sources in combination with decreasing channel gradient and valley confinement. Natural and human-caused disturbances such as mass movements, logging, fire, channel modifications for navigation and flood control, and gravel mining also have varying effects on channel condition, bed-material transport, and distribution and area of bars throughout the study areas and over time. Existing datasets include at least 16 and 18 sets of aerial and orthophotographs that were taken of the study areas in the Tillamook Bay tributary basins and Nehalem River basin, respectively, from 1939 to 2011. These photographs are available for future assessments of long-term changes in channel condition, bar area, and vegetation establishment patterns. High resolution Light Detection And Ranging (LiDAR) surveys acquired in 2007-2009 could support future quantitative analyses of channel morphology and bed-material transport in all study areas. A review of deposited and mined gravel volumes reported for instream gravel mining sites shows that bed-material deposition tends to rebuild mined bar surfaces in most years. Mean annual deposition volumes on individual bars exceeded 3,000 cubic meters (m 3 ) on Donaldson Bar on the Wilson River, Dill Bar on the Kilchis River, and Plant and Winslow Bars on the Nehalem River. Cumulative reported volumes of bed-material deposition were greatest at Donaldson and Dill Bars, totaling over 25,000 m 3 per site from 2004 to 2011. Within this period, reported cumulative mined volumes were greatest for the Donaldson, Plant, and Winslow Bars, ranging from 24,470 to 33,940 m 3 . Analysis of historical stage-streamflow data collected by the U.S. Geological Survey on the Wilson River near Tillamook (14301500) and Nehalem River near Foss (14301000) shows that these rivers have episodically aggraded and incised, mostly following high flow events, but they do not exhibit systematic, long-term trends in bed elevation. Multiple cross sections show that channels near bridge crossings in all six study areas are dynamic with many subject to incision and aggradation as well as lateral shifts in thalweg position and bank deposition and erosion. In fluvial reaches, unit bar area declined a net 5.3-83.6 percent from 1939 to 2009. The documented reduction in bar area may be attributable to several factors, including vegetation establishment and stabilization of formerly active bar surfaces, lateral channel changes and resulting alterations in sediment deposition and erosion patterns, and streamflow and/or tide differences between photographs. Other factors that may be associated with the observed reduction in bar area but not assessed in this reconnaissance level study include changes in the sediment and hydrology regimes of these rivers over the analysis period. In tidal reaches, unit bar area increased on the Tillamook and Nehalem Rivers (98.0 and 14.7 percent, respectively), but declined a net 24.2 to 83.1 percent in the other four tidal reaches. Net increases in bar area in the Tidal Tillamook and Nehalem Reaches were possibly attributable to tidal differences between the photographs as well as sediment deposition behind log booms and pile structures on the Tillamook River between 1939 and 1967. The armoring ratio (ratio of the median grain sizes of a bar's surface and subsurface layers) was 1.6 at Lower Waldron Bar on the Miami River, tentatively indicating a relative balance between transport capacity and sediment supply at this location. Armoring ratios, however, ranged from 2.4 to 5.5 at sites on the Trask, Wilson, Kilchis, and Nehalem Rivers; these coarse armor layers probably reflect limited bed-material supply at these sites. On the basis of mapping results, measured armoring ratios, and channel cross section surveys, preliminary conclusions are that the fluvial reaches on the Tillamook, Trask, Kilchis, and Nehalem Rivers are currently sediment supply-limited in terms of bed material - that is, the transport capacity of the channel generally exceeds the supply of bed material. The relation between transport capacity and sediment is more ambiguous for the fluvial reaches on the Wilson and Miami Rivers, but transport-limited conditions are likely for at least parts of these reaches. Some of these reaches have possibly evolved from sediment supply-limited to transport-limited over the last several decades in response to changing basin and climate conditions. Because of exceedingly low gradients, all the tidal reaches are transport-limited. Bed material in these reaches, however, is primarily sand and finer grain-size material and probably transported as suspended load from upstream reaches. These reaches will be most susceptible to watershed conditions affecting the supply and transport of fine sediment. Compared to basins on the southwestern Oregon coast, such as the Chetco and Rogue River basins, these six basins likely transport overall less gravel bed material. Although tentative in the absence of actual transport measurements, this conclusion is supported by the much lower area and frequency of bars and longer tidal reaches along all the northcoast rivers examined in this study. Previous studies suggest that the expansive and largely unvegetated bars visible in the 1939 photographs are primarily associated with voluminous sedimentation starting soon after the first Tillamook Burn fire in 1933. However, USGS studies of temporal bar trends in other Oregon coastal rivers unaffected by the Tillamook Burn show similar declines in bar area over approximately the same analysis period. In the Umpqua and Chetco River basins, historical declines in bar area are associated with long-term decreases in flood magnitude. Other factors may include changes in the type and volume of large wood and riparian vegetation. Further characterization of hydrology patterns in these basins and possible linkages with climate factors related to flood peaks, such as the Pacific Decadal Oscillation, could support inferences of expected future changes in vegetation establishment and channel planform and profile. More detailed investigations of bed-material transport rates and channel morphology would support assessments of lateral and vertical channel condition and longitudinal trends in bed material. Such assessments would be most practical for the fluvial study areas on the Wilson, Kilchis, Miami, and Nehalem Rivers and relevant to several ongoing management and ecological issues pertaining to sand and gravel transport. Tidal reaches may also be logical subjects for indepth analysis where studies would be more relevant to the deposition and transport of fine sediment (and associated channel and riparian conditions and processes) rather than coarse bed material.

Oregon↗

USGS1969

The Geologic Story of the Uinta Mountains

The opening of the West after the Civil War greatly stimulated early geologic exploration west of the 100th Meridian. One of the areas first studied, the Uinta Mountains region, gained wide attention as a result of the explorations of three Territorial Surveys, one headed by John Wesley Powell, one by Clarence King, and one by Ferdinand V. Hayden. Completion of the Union Pacific Railroad across southern Wyoming 100 years ago, in 1869, materially assisted geologic exploration, and the railheads at Green River and Rock Springs greatly simplified the outfitting of expeditions into the mountains. The overlap of the Powell, King, and Hayden surveys in the Uinta Mountains led to efforts that were less concerted than competitive and not without acrimony. Many parts of the area were seen by all three parties at almost the same time. Duplication was inevitable, of course, but all three surveys contributed vast quantities of new knowledge to the storehouse of geology, and many now-basic concepts arose from their observations. Powell's area of interest extended mainly southward from the Uinta Mountains to the Grand Canyon, including the boundless plateaus and canyons of southern Utah and northern Arizona. King's survey extended eastward from the High Sierra in California to Cheyenne, Wyoming, and encompassed a swath of country more than 100 miles wide. Hayden's explorations covered an immense region of mountains and basins from Yellowstone Park in Wyoming southeast throughout most of Colorado. Powell first entered the Uinta Mountains in the fall of 1868, having traveled north around the east end of the range from the White River country to Green River, Wyoming, then south over a circuitous route to Flaming Gorge and Browns Park, and finally back to the White River, where he spent the winter. In 1869, after reexamining much of the area visited the previous season, Powell embarked on his famous 'first boat trip' down the Green and Colorado Rivers. This trip was more exploratory than scientific; his second, more scientific trip was made 2 years later. Powell revisited the Uinta Mountains in 1874 and 1875 to complete the studies begun 6 years earlier. His classic 'Report on the Geology of the Eastern Portion of the Uinta Mountains and a Region of Country Adjacent Thereto' was published in 1876. King's survey?officially 'The United States Geological Exploration of the Fortieth Parallel'?is better known simply as the '40th Parallel Survey.' King began working eastward from California in 1867. The Uinta Mountains region, however, was mapped by S. F. Emmons, under the supervision of King, in the summers of 1869 and 1871. Emmons' work was monumental, and although he emphasized in his letter of transmittal to King the exploratory nature of the work?as the formal title of the report indicates?his maps, descriptions, and conclusions reflect a comprehensive understanding of the country and its rocks. The 40th Parallel report contains the best, most complete early descriptions of the Uinta Mountains. It, indeed, is a treasurechest of information and a landmark contribution to the emerging science of geology. Hayden visited the Uinta Mountains in 1870, descending the valley of Henrys Fork to Flaming Gorge in the fall after having earlier examined the higher part of the range to the west. Most of Hayden's observations were cursory, and he repeatedly expressed regret at having insufficient time for more detailed studies. In reference to the area between Clay Basin and Browns Park, he remarked (Hayden, 1871, p. 67) somewhat dryly that 'the geology of this portion of the Uinta range is very complicated and interesting. To have solved the problem to my entire satisfaction would have required a week or two.' Eighty-odd years later I spent several months there?looking at the same rocks. Powell was perhaps more creative?more intuitive?than either King or Hayden, and his breadth of interest in the fields of geology, physiography, ethnology, an

Bulletin↗

USGS2022

Comparisons of the NGA-Subduction ground motion models

In this article, ground-motion models (GMMs) for subduction earthquakes recently developed as part of the Next Generation Attenuation-Subduction (NGA-Sub) project are compared. The four models presented in this comparison study are documented in their respective articles submitted along with this article. Each of these four models is based on the analysis of the large NGA-Sub database. Three of the four current models are developed for a global version as well as separate regionalized models. The fourth model was developed based on earthquakes only from Japan, and as such is applicable only for Japan. As part of this comparison study, a general discussion on the parameterization of the four models and the regionalization of the three models is provided. The specific strengths and or weaknesses or the technical decisions and justifications of any one model are not part of this comparison. A selected suite of deterministic attenuation curves and spectra are presented for the models along with a selected suite of currently used subduction models. A limited number of comparisons are presented in this article with a larger number of comparisons and the digital values provided in the electronic attachment. In addition to these scenario calculation comparisons, the results from a standard probabilistic seismic hazard analysis (PSHA) for two sites located in the Pacific Northwest Region in the state of Washington are presented. These calculations highlight the potential impact of using the new GMMs. Based on the comparisons presented here, a general understanding of these new GMMs can be obtained with the expectation that the implementation of a specific seismic hazard study should incorporate similar and additional comparisons and sensitivity studies pertinent to the site of interest.

Earthquake Spectra↗

USGS2025

Pyrethroid insecticides implicated in mass mortality of monarch butterflies at an overwintering site in California

Since the 1980s, monarch butterfly ( Danaus plexippus plexippus ) populations across North America have declined by 80–95%. Although several studies have implicated pesticides as a contributing factor to their population declines, our understanding of monarch exposure levels in nature remains limited. In January 2024, a mass mortality event near an overwintering site in Pacific Grove, California, USA, provided an opportunity to analyze dead overwintering monarch butterflies for pesticide residues. Ten recently deceased butterflies were collected and analyzed using liquid and gas chromatography with tandem mass spectrometry (LC-MS/MS and GC-MS/MS). We identified a total of 15 pesticides and associated metabolites in the butterflies, including 8 insecticides (plus 1 associated metabolite), 2 herbicides (plus 2 associated metabolites), and 2 fungicides. On average, each monarch butterfly contained 7 pesticides, excluding transformation products if the parent compound was also detected. Notably, three pyrethroid insecticides—bifenthrin, cypermethrin, and permethrin—were consistently detected at or near each chemical’s lethal dose (LD 50 ). Bifenthrin and cypermethrin were found in every sample, while permethrin was present in all but two samples. The average concentrations of these insecticides were 451.9 ng/g dry weight (dw) for bifenthrin, 646.9 ng/g dw for cypermethrin, and 337.1 ng/g dw for permethrin. These findings demonstrate pesticide contamination in monarch butterflies, including within urban areas, and highlight the risks pesticides, especially insecticides, pose to monarch populations. Additional measures may be required to safeguard this species from pesticide exposure, particularly near aggregation locations, such as overwintering sites in coastal California.

California↗

USGS2006

Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments

The Pacific Estuarine Ecosystem Indicators Research Consortium seeks to develop bioindicators of toxicant-induced stress and bioavailability for wetland biota. Within this framework, the effects of environmental and pollutant variables on microbial communities were studied at different spatial scales over a 2-year period. Six salt marshes along the California coastline were characterized using phospholipid fatty acid (PLFA) analysis and terminal restriction fragment length polymorphism (TRFLP) analysis. Additionally, 27 metals, six currently used pesticides, total polychlorinated biphenyls and polycyclic aromatic hydrocarbons, chlordanes, nonachlors, dichlorodiphenyldichloroethane, and dichlorodiphenyldichloroethylene were analyzed. Sampling was performed over large (between salt marshes), medium (stations within a marsh), and small (different channel depths) spatial scales. Regression and ordination analysis suggested that the spatial variation in microbial communities exceeded the variation attributable to pollutants. PLFA analysis and TRFLP canonical correspondence analysis (CCA) explained 74 and 43% of the variation, respectively, and both methods attributed 34% of the variation to tidal cycles, marsh, year, and latitude. After accounting for spatial variation using partial CCA, we found that metals had a greater effect on microbial community composition than organic pollutants had. Organic carbon and nitrogen contents were positively correlated with PLFA biomass, whereas total metal concentrations were positively correlated with biomass and diversity. Higher concentrations of heavy metals were negatively correlated with branched PLFAs and positively correlated with methyl- and cyclo-substituted PLFAs. The strong relationships observed between pollutant concentrations and some of the microbial indicators indicated the potential for using microbial community analyses in assessments of the ecosystem health of salt marshes. Copyright ?? 2006, American Society for Microbiology. All Rights Reserved.

Applied and Environmental Microbiology↗

USGS2023

“Aftershock Faults” and what they could mean for seismic hazard assessment

We study stress‐loading mechanisms for the California faults used in rupture forecasts. Stress accumulation drives earthquakes, and that accumulation mechanism governs recurrence. Most moment release in California occurs because of relative motion between the Pacific plate and the Sierra Nevada block; we calculate relative motion directions at fault centers and compare with fault displacement directions. Dot products between these vectors reveal that some displacement directions are poorly aligned with plate motions. We displace a 3D finite‐element model according to relative motions and resolve stress tensors onto defined fault surfaces, which reveal that poorly aligned faults receive no tectonic loading. Because these faults are known to be active, we search for other loading mechanisms. We find that nearly all faults with no tectonic loading show increase in stress caused by slip on the San Andreas fault, according to an elastic dislocation model. Globally, faults that receive a sudden stress change respond with triggered earthquakes that obey an Omori law rate decay with time. We therefore term this class of faults as “aftershock faults.” These faults release ∼4% of the moment release in California, have ∼0.1%–5% probability of M 6.7 earthquakes in 30 yr, and have a 0.001%–1% 30 yr M 7.7 probability range.

California↗

USGS2021

Diet composition of Fishers (Pekania pennanti) reintroduced on the Olympic Peninsula, Washington

Knowledge of diet composition can inform management strategies and efforts to recover endangered carnivore populations in vacant portions of their historic ranges. One such species, the Fisher ( Pekania pennanti ), was extirpated in Washington State prior to any formal documentation of its food habits in the coastal coniferous forests of western Washington. Fisher recovery efforts in Washington, based on translocating Fishers from extant populations, have been ongoing since 2008, beginning with the release of 90 Fishers on Washington's Olympic Peninsula from 2008 to 2010. We collected fecal samples or digestive tracts from 13 Fishers opportunistically on the Olympic Peninsula from 2009 through 2013. Subsequently, we identified the species composition of each sample's contents to determine the primary foods consumed by the reintroduced Fishers. Fisher diets were diverse and dominated by mammalian prey. Contents of feces and digestive tracts of Fishers were composed primarily of Snowshoe Hare ( Lepus americanus ) remains, followed by lesser proportions of Mountain Beavers ( Aplodontia rufa ), Northern Flying Squirrels ( Glaucomys sabrinus ), Douglas Squirrels ( Tamiasciurus douglasii ), Southern Red-backed Voles ( Myodes gapperi ), shrews ( Sorex spp.), and unidentified ungulate species. The diet of Fishers comprised species that occur across a wide range of land uses and management prescriptions, including previously logged forests and mature forests that have been set aside for retention of old-growth forest characteristics. Additional study of prey abundance and Fisher foraging behaviors related to structural habitat characteristics across a gradient of land uses would provide useful insights for enhancing the effectiveness of conservation efforts to benefit Fishers in Pacific Northwest coastal forests.

Washington↗

USGS2022

Monitoring the movements of juvenile Pacific Lamprey (Entosphenus tridentatus) in the Yakima River, Washington, using acoustic telemetry, 2019–20

Anthropogenic barriers to main-stem and tributary passage are one of the primary threats associated with declining populations of Pacific Lamprey ( Entosphenus tridentatus ) in the Columbia River Basin. Juvenile lamprey are of special interest because their downstream migration to the ocean may be affected by barriers such as dams or water diversions. Telemetry studies that describe the movement and passage of juvenile lamprey have not been possible until the recent development of a micro-transmitter specifically for use in juvenile lamprey and eels. Through a collaborative research approach, we used these prototype transmitters and acoustic monitoring arrays installed for a juvenile salmon ( Oncorhynchus spp.) migration study to evaluate juvenile lamprey movements in the Yakima River (river kilometer 179 to the river mouth) in 2019 and 2020. We tagged and released 152 juvenile lamprey from April 30 to June 5, 2019, and on June 9, 2020. Lamprey were released 6.9 kilometers (km) upstream from Wapato Dam, 1.2 km upstream from Prosser Dam, and into the canal and tailrace at Prosser Dam. Most tagged lamprey did not initiate downstream movements within the 18 days of tag life, as evidenced by our detections of lamprey in the highest numbers at the first monitoring site downstream from their release site, with limited or no detections at sites farther downstream. There was no evidence of missed detections (lamprey detected at a downstream site without corresponding detections upstream). Overall detections of tagged lamprey were low: 27.0 percent in 2019 and 48.0 percent in 2020. River flows were less than the 10-year average during the monitoring period and water temperatures were variable. Lamprey arrived at detections sites predominantly during periods of darkness (85.3–96.6 percent) following daytime releases. Travel rates through the study area ranged from 0.2 to 45.3 kilometers per day, and lamprey generally remained at each detection station for less than about 20 minutes. Groups of lamprey released together generally had similar travel rates with a small number of fish that moved more quickly or slowly than the remainder of the group. In addition to monitoring the migration and behavior of juvenile lamprey, we also assessed some assumptions of survival models (determining downstream drift of purposely killed fish and empirically measuring transmitter operating life) to benefit future evaluations focused on migration survival of juvenile lamprey.

Washington↗

USGS1985

Cost-effectiveness of the stream-gaging program in the Hawaii District

This project documents the results of a study of the cost-effectiveness of the stream-gaging program in the Hawaii District. The stream gages in the District were divided into two groups, the State of Hawaii and the Other Pacific Areas. Data uses and funding sources were identified for the 124 continuous stream gages currently being operated in the Hawaii District with a budget of $570,620. All the stream-gages were identified as having sufficient reason to continue their operation and they should be maintained in the program for the foreseeable future. (USGS)

Water-Resources Investigations Report↗

USGS2011

Status and Natural History of Emballonura Semicaudata Rotensis on Aguiguan, Mariana Islands

Pacific sheath-tailed bats ( Emballonura semicaudata rotensis ) in the Mariana Islands declined greatly in abundance and distribution during the 20th century. The small island of Aguiguan now supports the only persisting population. We studied abundance and natural history of this population from 1995–2008. There was a likely population increase during the study, with 359–466 (minimum and maximum) bats counted at caves in 2008. Bats roosted only in caves, primarily those of relatively larger size. Bats were detected in only seven of 95 caves; three caves were always occupied when surveyed. One cave consistently had the largest colony ( ± SD = 333 ± 33.6 in 2008). Others held 1–64 bats. Cave environments showed no complexities in temperature or humidity. Preliminary observations indicate a litter size of one and the possibility of birthing timed to coincide with the transitional period leading into the rainy season (June–July). We review potential threats to E. s. rotensis on Aguiguan and make suggestions for conservation.

Acta Chiropterologica↗

USGS2024

Antibodies to influenza A virus in Lesser (Aythya affinis) and Greater Scaup (Aythya marila) in the USA

Scaup, including both Lesser and Greater ( Aythya affinis and Aythya marila , respectively), are a grouping of populous and widespread North American diving ducks. Few influenza type A viruses (IAV) have been reported from these species despite a high prevalence of antibodies to IAV being reported. Existing virologic and serologic data indicate that IAV infection routinely occurs in scaup, yet it is unknown which IAV subtypes are linked to these infections. In this study, we aimed to gain a more complete picture of IAV natural history in Lesser and Greater Scaup from two coastal flyways in North America in 2015–18 (302 samples from California in the Pacific Flyway and 471 samples from Maryland in the Atlantic Flyway). Low prevalence of active IAV infection was detected by real-time reverse-transcription PCR in Lesser Scaup sampled in Maryland and California (2.8% and 8.1%, respectively). A single IAV (H1N1) was isolated in embryonated chicken eggs from a bird sampled in California. Similarly low levels were observed in Greater Scaup in California (3.3%). Antibodies to the nucleoprotein as detected with a commercial blocking ELISA were observed in all species and flyway combinations. Antibody seroprevalence estimates were higher in adult Lesser Scaup than in juveniles at both the ≤0.5 ( P <0.001, z=–3.582) and ≤0.7 serum-sample-to-negative-control absorbance thresholds ( P =0.003, z=–2.996). Neutralizing antibodies to H1–H12, H14, and H15 were detected using a microtiter virus neutralization assay, with the highest prevalence of antibodies against H1 (38%), H6 (36%), and H11 (35%). The high prevalence of antibodies to IAV and evidence of previous exposure to numerous subtypes are consistent with a high level of population immunity and a low prevalence of infection. These results must be interpreted in the context of season (winter sampling), as results may vary with the annual influx of naïve juvenile birds.

California, Maryland↗