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At least 649 records · Page 36Linked to original sources

USGS2017

Born of fire: In search of volcanoes in U.S. national parks, four striking examples

Geologic features, particularly volcanic features, have been protected by the National Park Service since its inception. Some volcanic areas were nationally protected even before the National Park Service was established. The first national park, Yellowstone National Park, is one of the most widely known geothermal and volcanic areas in the world. It contains the largest volcanic complex in North America and has experienced three eruptions which rate among the largest eruptions known to have occurred on Earth. Half of the twelve areas established as national parks before the 1916 Organic Act which created the National Park Service are centered on volcanic features. The National Park Service now manages lands that contain nearly every conceivable volcanic resource, with at least seventy-six managed lands that contain volcanoes or volcanic rocks. Given that so many lands managed by the National Park Service contain volcanoes and volcanic rocks, we cannot give an overview of the history of each one; rather we highlight four notable examples of parks that were established on account of their volcanic landscapes. These parks all helped to encourage the creation and success of the National Park Service by inspiring the imagination of the public. In addition to preserving and providing access to the nation's volcanic heritage, volcanic national parks are magnificent places to study and understand volcanoes and volcanic landscapes in general. Scientists from around the world study volcanic hazards, volcanic history, and the inner working of the Earth within U.S. national parks. Volcanic landscapes and associated biomes that have been relatively unchanged by human and economic activities provide unique natural laboratories for understanding how volcanoes work, how we might predict eruptions and hazards, and how these volcanoes affect surrounding watersheds, flora, fauna, atmosphere, and populated areas.

Earth Sciences History↗

USGS2014

Decomposition

A cornerstone of ecosystem ecology, decomposition was recognized as a fundamental process driving the exchange of energy in ecosystems by early ecologists such as Lindeman 1942 and Odum 1960). In the history of ecology, studies of decomposition were incorporated into the International Biological Program in the 1960s to compare the nature of organic matter breakdown in various ecosystem types. Such studies still have an important role in ecological studies of today. More recent refinements have brought debates on the relative role microbes, invertebrates and environment in the breakdown and release of carbon into the atmosphere, as well as how nutrient cycling, production and other ecosystem processes regulated by decomposition may shift with climate change. Therefore, this bibliography examines the primary literature related to organic matter breakdown, but it also explores topics in which decomposition plays a key supporting role including vegetation composition, latitudinal gradients, altered ecosystems, anthropogenic impacts, carbon storage, and climate change models. Knowledge of these topics is relevant to both the study of ecosystem ecology as well projections of future conditions for human societies.

Article↗

USGS2009

Life history and status of shortnose sturgeon (Acipenser brevirostrum) in the Potomac River

We collected the first life history information on shortnose sturgeon (Acipenser brevirostrum) in any of the rivers to Chesapeake Bay, the geographic center of the species range. In the Potomac River, two telemetry-tagged adult females used 124 km of river: a saltwater/freshwater reach at river km (rkm) 63-141 was the foraging-wintering concentration area, and one female migrated to spawn at rkm 187 in Washington, DC. The spawning migration explained the life history context of an adult captured 122 years ago in Washington, DC, supporting the idea that a natal population once lived in the river. Repeated homing migrations to foraging and wintering areas suggested the adults were residents, not transient coastal migrants. All habitats that adults need to complete life history are present in the river. The Potomac River shortnose sturgeon offers a rare opportunity to learn about the natural rebuilding of a sturgeon population.

Journal of Applied Ichthyology↗

USGS1975

Flood hazards in the Seattle-Tacoma urban complex and adjacent areas, Washington

Floods are natural hazards that have complicated man's land-use planning for as long as we have had a history. Although flood hzards are a continuing danger, the year-to-year threat cannot be accurately predicted. Also, on any one stream, the time since the last destructive flood might be so long that most people now living near the stream have not experienced such a flood. Because of the unpredictability and common infrequency of disastrous flooding, or out of ignorance about the danger, or perhaps because of an urge to gamble, man tends to focus his attention on only the advantages of the flood-prone areas, rather than the risk due to the occasional major flood. The purposes of this report are to: (1) briefly describe flood hazards in this region, including some that may be unique to the Puget Sound basin, (2) indicate the parts of the area for which flood-hazard data are available, and (3) list the main sources of hydrologic information that is useful for flood-hazard analysis in conjuction with long-range planning. This map-type report is one of a series being prepared by the U.S. Geological Survey to present basic environmental information and interpretations to assist land-use planning in the Puget Sound region.

Washington↗

USGS2015

The U.S. Geological Survey Geologic Collections Management System (GCMS)—A master catalog and collections management plan for U.S. Geological Survey geologic samples and sample collections

**Updated guidance is available in USGS Instructional Memorandum CSS 2019-01 .** Abstract The U.S. Geological Survey (USGS) is widely recognized in the earth science community as possessing extensive collections of earth materials collected by research personnel over the course of its history. In 2006, a Geologic Collections Inventory was conducted within the USGS Geology Discipline to determine the extent and nature of its sample collections, and in 2008, a working group was convened by the USGS National Geologic and Geophysical Data Preservation Program to examine ways in which these collections could be coordinated, cataloged, and made available to researchers both inside and outside the USGS. The charge to this working group was to evaluate the proposition of creating a Geologic Collections Management System (GCMS), a centralized database that would (1) identify all existing USGS geologic collections, regardless of size, (2) create a virtual link among the collections, and (3) provide a way for scientists and other researchers to obtain access to the samples and data in which they are interested. Additionally, the group was instructed to develop criteria for evaluating current collections and to establish an operating plan and set of standard practices for handling, identifying, and managing future sample collections. Policies and procedures promoted by the GCMS would be based on extant best practices established by the National Science Foundation and the Smithsonian Institution. The resulting report—USGS Circular 1410, “The U.S. Geological Survey Geologic Collections Management System (GCMS): A Master Catalog and Collections Management Plan for U.S. Geological Survey Geologic Samples and Sample Collections”—has been developed for sample repositories to be a guide to establishing common practices in the collection, retention, and disposal of geologic research materials throughout the USGS. While constructing this report, the GCMS’s potential customers and their needs were considered. Two critical definitions have been clarified: a repository is a facility for the long-term management of geologic collections, and a collection is a set of specimens that have been brought together on the basis of some common characteristic. Required sample metadata for newly collected samples, as well as for older collections, were also stipulated and are listed and explained in this report. Several basic policies are also recommended by the GCMS in order to standardize operations among the physical repositories where collections are currently housed. The GCMS Collection Management Plan provides a set of protocols and templates for the management of scientific collections, including access, storage, transfer, and disposal of physical geologic samples and data. This plan is flexible to allow each repository to adapt the practices best suited to its collections. The general consideration for implementation of the GCMS is that all active USGS geologic sample repositories will form the core of GCMS and that participating science centers will develop procedures based on proposed GCMS methodologies. The GCMS is a collective resource for the entire USGS community and the users who discover the geologic materials kept in these repositories and seek to access them.

Circular↗

USGS2005

Descriptions and preliminary report on sediment cores from the southwest coastal area, Everglades National Park, Florida

Sediment cores were collected from five locations in the southwest coastal area of Everglades National Park, Florida, in May 2004 for the purpose of determining the ecosystem history of the area and the impacts of changes in flow through the Shark River Slough. An understanding of natural cycles of change prior to significant human disturbance allows land managers to set realistic performance measures and targets for salinity and other water quality and quantity quality measures. Preliminary examination of the cores indicates significant changes have taken place over the last 1000-2000 years. The cores collected from the inner bays — the most landward bays — are distinctly different from other estuarine sediment cores examined in Florida Bay and Biscayne Bay. Peats in the inner-bay cores from Big Lostmans Bay, Broad River Bay, and Tarpon Bay were deposited at least 1000 years before present (BP) based on radiocarbon analyses. The peats are overlain by poorly sorted organic muds and sands containing species indicative of deposition in a freshwater to very low salinity environment. The Alligator Bay core, the most northern inner-bay core, is almost entirely sand; no detailed faunal analyses or radiometric dating has been completed on this core. The Roberts River core, taken from the mouth of the River where it empties into Whitewater Bay, is lithologically and faunally similar to previously examined cores from Biscayne and Florida Bays; however, the basal unit was deposited ~2000 years before the present based on radiocarbon analyses. A definite trend of increasing salinity over time is seen in the Roberts River core, from sediments representing a terrestrially dominated freshwater environment at the bottom of the core to those representing an estuarine environment with a strong freshwater influence at the top. The changes seen at Roberts River could represent a combination of factors including rising sea-level and changes in freshwater supply, but the timing and extent of the changes needs to be determined. The preliminary information on the cores collected in 2004 will be combined with data from cores collected in July 2005. The 2005 cores were collected along transects moving from the inner bays out towards the coast. These transects, combining information from the 2004 and 2005 cores, will allow us to examine long term trends in freshwater supply, sea-level rise, and potentially the impact of storms on the coastal ecosystem.

Florida↗

USGS1977

Genesis of a zoned granite stock, Seward Peninsula, Alaska

A composite epizonal stock of biotite granite has intruded a diverse assemblage of metamorphic rocks in the Serpentine Hot Springs area of north-central Seward Peninsula, Alaska. The metamorphic rocks include amphibolite-facies orthogneiss and paragneiss, greenschist-facies fine-grained siliceous and graphitic metasediments, and a variety of carbonate rocks. Lithologic units within the metamorphic terrane trend generally north-northeast and dip moderately toward the southeast. Thrust faults locally juxtapose lithologic units in the metamorphic assemblage, and normal faults displace both the metamorphic rocks and some parts of the granite stock. The gneisses and graphitic metasediments are believed to be late Precambrian in age, but the carbonate rocks are in part Paleozoic. Dating by the potassium-argon method indicates that the granite stock is Late Cretaceous. The stock has sharp discordant contacts, beyond which is a well-developed thermal aureole with rocks of hornblende hornfels facies. The average mode of the granite is 29 percent plagioclase, 31 percent quartz, 36 percent K-feldspar, and 4 percent biotite. Accessory minerals include apatite, magnetite, sphene, allanite, and zircon. Late-stage or deuteric minerals include muscovite, fluorite, tourmaline, quartz, and albite. The stock is a zoned complex containing rocks with several textural facies that are present in four partly concentric zones. Zone 1 is a discontinuous border unit, containing fine- to coarse-grained biotite granite, that grades inward into zone 2. Zone 2 consists of porphyritic biotite granite with oriented phenocrysts of pinkish-gray microcline in a coarse-grained equigranular groundmass of plagioclase, quartz, and biotite. It is in sharp, concordant to discordant contact with rocks of zone 3. Zone 3 consists of seriate-textured biotite granite that has been intruded by bodies of porphyritic biotite granite containing phenocrysts of plagioclase, K-feldspar, quartz, and biotite in an aplitic groundmass. Flow structures, pegmatite and aplite segregations, and miarolitic cavities are common in the seriate-textured granite. Zone 4, which forms the central part of the complex, consists of fine- to medium-grained biotite granite and locally developed leucogranite. Small miarolitic cavities are common within it. Eight textural facies have been defined within the complex, and mineralogic, petrographic, modal, and chemical variations are broadly systematic within the facies sequence. Study of these variations shows that the gradational facies of zones l and 2 systematically shift toward more mafic compositions inward within the complex. Seriate-textured rocks of zone 3 are similar in composition to those of zone 2, but porphyritic rocks of zone 3 and rocks of zone 4 mark shifts to more felsic compositions. These late-crystallizing felsic rocks are products of an interior residual magma system. This system was enriched in water and certain trace elements including tin, lithium, niobium, lead, and zinc. The complex as a whole has higher concentrations of these elements than many other granites. The nature of this geochemical specialization is particularly well demonstrated by the trace-element composition of biotite. The crystallization history of the pluton was complex. The available data suggest that this history could have included: (1) chilling and metasomatic alteration adjacent to the contact, (2) in-situ crystallization in several marginal facies accompanied by some transfer of residual constituents toward interior parts of the pluton, (3) slight upward displacement of magma that was subjacent to the crystallized walls, accompanied by disequilibrium crystallization and local vapor saturation, (4) upward displacement of part of the residual water-rich interior magma, accompanied by rapid loss of a separated vapor phase, and (5) displacement of the margins of the pluton by normal faults, accompanied by loss of an exsolved vapor phase from th

Open-File Report↗

USGS2013

Porphyry copper assessment of Southeast Asia and Melanesia: Chapter D in Global mineral resource assessment

The U.S. Geological Survey collaborated with member countries of the Coordinating Committee for Geoscience Programmes in East and Southeast Asia (CCOP) on an assessment of the porphyry copper resources of Southeast Asia and Melanesia as part of a global mineral resource assessment. The region hosts world-class porphyry copper deposits and underexplored areas that are likely to contain undiscovered deposits. Examples of known porphyry copper deposits include Batu Hijau and Grasberg in Indonesia; Panguna, Frieda River, and Ok Tedi in Papua New Guinea; and Namosi in Fiji. This assessment covers the countries of Cambodia, Indonesia, Lao People’s Democratic Republic, Malaysia, Myanmar, Papua New Guinea, Singapore, Thailand, and parts of southeastern China, India, the Solomon Islands, Vanuatu, and Fiji. Twenty-two geographic areas were delineated as tracts that are permissive for porphyry copper deposits in Southeast Asia. Permissive tracts are grouped into four broadly defined geographic/geologic areas, as follows: (1) the Indochina Peninsula area, (2) Indonesian and Malaysian Islands, (3) New Guinea Island and Papuan New Guinea islands, and (4) Melanesia. Individual tracts range from less than 1,000 to more than 350,000 square kilometers in area. Permissive tracts are based on mapped and inferred subsurface (<1 kilometer depth) distributions of igneous rocks of specific age ranges that define magmatic arcs and magmatic belts that are likely to contain porphyry copper deposits. Most of these magmatic arcs are subduction-related, although some have porphyry-style deposits occurring in postcollisional and (or) poorly understood tectonic settings. Although maps at a variety of different scales were used in the compilation, the final tract boundaries are intended for use at a scale of 1:1,000,000. Global grade and tonnage models for porphyry copper deposits were evaluated. Most of the known deposits are best described as fitting the copper-gold (Cu-Au) subtype of porphyry copper deposit. For some permissive tracts, a general porphyry copper-gold-molybdenum (Cu-Au-Mo) model was used. Assessment participants estimated numbers of undiscovered deposits at different levels of confidence for most of the permissive tracts. These estimates were combined with grade and tonnage models using a Monte Carlo simulation to estimate undiscovered resources. Additional resources in extensions of deposits with identified resources were not evaluated. Assessment results, presented in tables and graphs, show mean amounts of metal and mineralized rock in undiscovered deposits at different quantile levels, as well as the arithmetic mean for each tract. This assessment estimated a mean of 89 undiscovered porphyry copper deposits for the assessed permissive tracts in Southeast Asia and Melanesia. About 288 million metric tons (Mt) of copper and 18,000 metric tons (t) of gold, as well as byproduct molybdenum and silver, could be associated with undiscovered deposits. This represents about four times the number of deposits with identified resources (23) already discovered in Southeast Asia; reliable reported identified resources for those 23 deposits total 84 Mt of copper and 6,000 t of gold. Eleven permissive tracts have no known porphyry copper deposits with reported resources. Three of those 11 tracts lacked sufficient information for a probabilistic assessment and are discussed in qualitative terms. On a regional basis, both the Indochina Peninsula area and the Indonesian-Malaysian Islands area are estimated to contain about 10 times as much in place copper in undiscovered porphyry copper deposits as has been identified to date. For the New Guinea Island areas, the ratio of undiscovered to identified copper resources is about 2. Some parts of the region have a long history of porphyry exploration cycles and mine development, interrupted at times by political and social unrest, environmental concerns, and natural disasters. Changes in mining laws within the region and the recent high price of gold on the world market have prompted renewed interest in porphyry copper deposits in Southeast Asia and Melanesia. However, predicted undiscovered deposits may not be found, and if found, may not be developed. This assessment includes an overview of the assessment results with summary tables. Detailed descriptions of each tract are included in appendixes, with estimates of numbers of undiscovered deposits, and probabilistic estimates of amounts of copper, molybdenum, gold, and silver that could be contained in undiscovered deposits for each permissive tract. A geographic information system (GIS) that accompanies the report includes tract boundaries and a database of known porphyry copper deposits and significant prospects.

Scientific Investigations Report↗

USGS2014

Porphyry copper assessment of East and Southeast Asia: Philippines, Taiwan (Republic of China), Republic of Korea (South Korea), and Japan

The U.S. Geological Survey collaborated with member countries of the Coordinating Committee for Geoscience Programmes in East and Southeast Asia (CCOP) on an assessment of the porphyry copper resources of East and Southeast Asia as part of a global mineral resource assessment. The assessment covers the Philippines in Southeast Asia, and the Republic of Korea (South Korea), Taiwan (Province of China), and Japan in East Asia. The Philippines host world class porphyry copper deposits, such as the Tampakan and Atlas deposits. No porphyry copper deposits have been discovered in the Republic of Korea (South Korea), Taiwan (Province of China), or Japan. Thirteen geographic areas were delineated as tracts that are permissive for porphyry copper deposits in the assessed area. Individual tracts range from about 3,000 to 100,000 square kilometers in area. Permissive tracts are delineated on the basis of mapped distributions of igneous rocks of specific age ranges that define subduction-related magmatic arcs or magmatic belts that might contain porphyry copper deposits. Most of these magmatic arcs are subduction related, although some porphyry deposits and prospects are present in back-arc or poorly understood tectonic settings. Maps at various scales were used in the compilation; however, the final tract boundaries are intended for use at a scale of 1:1,000,000. Numbers of undiscovered deposits were estimated at different levels of confidence for 10 permissive tracts in the Philippines including one area that extends to eastern Taiwan (Republic of China); permissive tracts in South Korea and Japan are discussed qualitatively. Estimates of numbers of undiscovered deposits were combined with grade and tonnage models using Monte Carlo simulation to estimate amounts of undiscovered resources. Grades and tonnages of known porphyry copper deposits in the study area were compared with global grade and tonnage models to determine the appropriate model for simulation of undiscovered resources. Most of the known deposits are best described as copper-gold subtypes of porphyry copper deposits. For some permissive tracts, a general porphyry copper-gold-molybdenum model was used. Thirty-eight porphyry copper deposits are known in the Philippines; the mean number of undiscovered deposits was estimated to be 28. Mean (arithmetic) resources that could be associated with the undiscovered deposits are 90 million metric tons of copper and 5,800 metric tons of gold, as well as byproduct molybdenum and silver. Additional resources that could be discovered in extensions to known deposits were not evaluated. Assessment results, presented in tables and graphs, indicate expected amounts of total contained metal and mineralized rock in undiscovered deposits at different quantile levels, as well as the arithmetic mean for each tract. The Philippines have a long history of porphyry exploration cycles and mine development, interrupted at times by political and social unrest, environmental concerns, and natural disasters. Changes in mining laws within the region and the recent high price of gold on the world market have prompted renewed interest in porphyry copper deposits in the region. South Korea and Japan have been thoroughly explored for many types of mineral deposits. Available data suggest that the permissive rocks in South Korea typically are too deeply eroded to preserve porphyry copper deposits. Porphyry copper systems may be present in Japan, but are likely to lie at depths greater than the 1 kilometer from the surface protocol adopted for this study. Descriptions of the geologic basis for delineating each tract, the data used, the geologic criteria and rationale for the assessment, and results of the assessment are included in appendixes along with the description of a geographic information system (GIS) that includes tract boundaries, known porphyry copper deposits and significant prospects, and assessment results.

Scientific Investigations Report↗

USGS2009

Learning to be different: Acquired skills, social learning, frequency dependence, and environmental variation can cause behaviourally mediated foraging specializations

Question: How does the ability to improve foraging skills by learning, and to transfer that learned knowledge, affect the development of intra-population foraging specializations? Features of the model: We use both a state-dependent life-history model implemented by stochastic dynamic programming (SDPM) and an individual-based model (IBM) to capture the dynamic nature of behavioural preferences in feeding. Variables in the SDPM include energy reserves, skill levels, energy and handling time per single prey item, metabolic rate, the rates at which skills are learned and forgotten, the effect of skills on handling time, and the relationship between energy reserves and fitness. Additional variables in the IBM include the probability of successful weaning, the logistic dynamics of the prey species with stochastic recruitment, the intensity of top-down control of prey by predators, the mean and variance in skill levels of new recruits, and the extent to which learned Information can be transmitted via matrilineal social learning. Key range of variables: We explore the effects of approaching the time horizon in the SDPM, changing the extent to which skills can improve with experience, increasing the rates of learning or forgetting of skills, changing whether the learning curve is constant, accelerating (T-shaped) or decelerating ('r'-shaped), changing both mean and maximum possible energy reserves, changing metabolic costs of foraging, and changing the rate of encounter with prey. Conclusions: The model results show that the following factors increase the degree of prey specialization observed in a predator population: (1) Experience handling a prey type can substantially improve foraging skills for that prey. (2) There is limited ability to retain complex learned skills for multiple prey types. (3) The learning curve for acquiring new foraging skills is accelerating, or J-shaped. (4) The metabolic costs of foraging are high relative to available energy reserves. (5) Offspring can learn foraging skills from their mothers (matrilineal social learning). (6) Food abundance is limited, such that average individual energy reserves are low Additionally, the following factors increase the likelihood of alternative specializations co-occurring in a predator population: (1) The predator exerts effective top-down control of prey abundance, resulting in frequency-dependent dynamics. (2) There is stochastic Variation in prey population dynamics, but this Variation is neither too extreme in magnitude nor too 'slow' with respect to the time required for an individual forager to learn new foraging skills. For a given predator population, we deduce that the degree of specialization will be highest for those prey types requiring complex capture or handling skills, while prey species that are both profitable and easy to capture and handle will be included in the diet of all individuals. Frequency-dependent benefits of selecting alternative prey types, combined with the ability of foragers to improve their foraging skills by learning, and transmit learned skills to offspring, can result in behaviourally mediated foraging specialization, and also lead to the co-existence of alternative specializations. The extent of such specialization is predicted to be a variable trait, increasing in locations or years when intra-specific competition is high relative to inter-specific competition. ?? 2009 M. Tim Tinker.

Evolutionary Ecology Research↗

USGS2009

Fire rehabilitation effectiveness: a chronosequence approach for the Great Basin

Federal land management agencies have invested heavily in seeding vegetation for emergency stabilization and rehabilitation (ES&R) of non-forested lands. ES&R projects are implemented to reduce post-fire dominance of non-native annual grasses, minimize probability of recurrent fire, quickly recover lost habitat for sensitive species, and ultimately result in plant communities with desirable characteristics including resistance to invasive species and resilience or ability to recover following disturbance. Land managers lack scientific evidence to verify whether seeding non-forested lands achieves their desired long-term ES&R objectives. The overall objective of our investigation is to determine if ES&R projects increase perennial plant cover, improve community composition, decrease invasive annual plant cover and result in a more desirable fuel structure relative to no treatment following fires while potentially providing habitat for Greater Sage-Grouse, a species of management concern. In addition, we provide the locations and baseline vegetation data for further studies relating to ES&R project impacts. We examined effects of seeding treatments (drill and broadcast) vs. no seeding on biotic and abiotic (bare ground and litter) variables for the dominant climate regimes and ecological types within the Great Basin. We attempted to determine seeding effectiveness to provide desired plant species cover while restricting non-native annual grass cover relative to post-treatment precipitation, post-treatment grazing level and time-since-seeding. Seedings were randomly sampled from all known post-fire seedings that occurred in the four-state area of Idaho, Nevada, Oregon and Utah. Sampling locations were stratified by major land resource area, precipitation, and loam-dominated soils to ensure an adequate spread of locations to provide inference of our findings to similar lands throughout the Great Basin. Nearly 100 sites were located that contained an ES&R project. Of these sites, 61 were seeded by using a drill, 27 were broadcast aerially, and 12 had a combination of both. We randomly sampled three burned and seeded, burned and unseeded, and unburned and unseeded locations in the vicinity of the fire, each within the same ecological site. We measured foliar cover of all plant functional groups (perennial or annual, shrub, grass, forb, native or introduced), biological soil crusts, and abiotic (bare soil and litter) variables using the line-point intercept protocol. Fuel loads and horizontal fuel continuity were measured. We applied linear mixed models to response variables (cover and density of plant groups) relative to the dependent variables (seeding treatments and precipitation/temperature relationships. Post-fire strengths with native perennial grasses or shrubs in mixes did not increase density or cover of these groups significantly relative to unseeded, burned areas. Seeded non-native perennial grasses and the shrub Bassia prostrata were effective in providing more cover in aerial and drill seedings. Seeded non-native perennial grass cover increased with increased annual precipitation regardless of seeding type. Seeding native shrubs, particularly Artemisia tridentata, did not significantly increase shrub cover in burned areas. Cover of undesirable non-native annual grasses was lower in drill seedings relative to unseeded areas but only at higher elevations. Seeding effectiveness after wildfire is unpredictable in drier, low elevation environments, and our findings indicate management objectives are more likely met when focusing efforts on higher elevation or higher precipitation locations where establishment of perennial grasses is more likely. On sites where potential for invasion and dominance of non-native annuals is high, such as lower and drier sites, intensive methods of restoration that include invasive plant control before seeding may be required. Where establishment of native perennial plants is the goal, managers might consider using native-only seed mixtures, because we found that the non-native perennials typically used in Great Basin restoration efforts are selected for their competitive nature and may reduce establishment of less competitive native species. Although we attempted to include information on livestock grazing history after seedings, we were unable to extract sufficient data from files to address this topic that may play an additional role in understanding native plant abundance post-fire seeding. Evaluation of drill and aerial seeding effects on fuel characteristics focused on two metrics that are standard inputs for fire behavior models, fuel load and fuel continuity. Fuel loads were evaluated separately for total fuel load biomass, and the individual components that sum to total biomass, namely herbaceous, shrub, shrub:herbaceous ratio, litter, 10-hour, and 100-hour fuel biomasses. Fuel continuity was evaluated using the following cover categories, total, annual grass, annual forb, perennial forb perennial grass, shrub, litter, vegetative interspace, and perennial interspace. Drill seeding did not affect fuel loads, except to reduce 10-hour fuels, probably due to mechanical destruction of dead and down fuels by the drill seeding equipment. Drill seeding did affect fuel continuity, specifically decreasing total plant cover by increasing perennial grass cover which suppressed annual grass and litter production resulting in a net decrease in continuity, but only at the elevations above approximately 1500m. Aerial seeding had no effect on any fuel load or fuel continuity category. For the Greater Sage-Grouse habitat study, we developed multi-scale empirical models of sage-grouse occupancy in 211 randomly located plots within a 40 million ha portion of the species’ range. We then used these models to predict sage-grouse habitat quality at 101 ES&R seeding projects. We compared conditions at restoration sites to published habitat guidelines. Sage-grouse occupancy was positively related to plot- and landscape-level dwarf sagebrush (Artemisia arbuscula, A. nova, A. tripartita) and big sagebrush steppe, and negatively associated with non-native grass and human development. The predicted probability of sage-grouse occupancy at treated plots was low on average (0.07–0.09) and was not significantly different from burned areas that had not been treated. Restoration was more often successful at higher elevation sites with low annual temperatures, high spring precipitation, and high plant diversity. No plots seeded after fire (n=313) met all overstory guidelines for breeding habitats, but approximately 50% met understory guidelines, particularly for perennial grasses. This trend was similar for summer habitat. Ninety-eight percent of treated plots did not meet winter habitat guidelines. Restoration actions in burned areas did not increase the probability of meeting most guideline criteria. The probability of meeting guidelines was influenced by a latitudinal gradient, local climate, and topography. Post-fire seeding treatments in Great Basin sagebrush shrublands generally have not created high quality habitat for sage-grouse. Understory conditions are more likely to be adequate than those of overstory, but in unfavorable climates, establishing forbs and reducing cheatgrass dominance is unlikely. Reestablishing sagebrush cover will require more than 20 years using the restoration methods of the past two decades. Given current fire frequencies and restoration capabilities, protection of landscapes containing a mix of dwarf sagebrush and big sagebrush steppe, minimal human development, and low non-native plant cover may provide the best opportunity for conservation of sage-grouse habitats. Our database of ES&R locations has used the Land Treatment Digital Library to archive data and location information regarding our study (see Pilliod and Welty 2013). This has contributed to two additional studies. One examined the potential spread of Bassia prostrata (aka Kochia prostrata; forage kochia) from ES&R project locations (Gray and Muir 2013). The second used remote sensing to determine the phenology of vegetation green-up on post-fire seeded sites (Sankey et al. 2013).

California;Idaho;Oregon;Utah↗

USGS2020

Effects of a temperature rise on melatonin and thyroid hormones during smoltification of Atlantic salmon, Salmo salar

Smoltification prepares juvenile Atlantic salmon ( Salmo salar ) for downstream migration. Dramatic changes characterize this crucial event in the salmon’s life cycle, including increased gill Na + /K + -ATPase activity (NKA) and plasma hormone levels. The triggering of smoltification relies on photoperiod and is modulated by temperature. Both provide reliable information, to which fish have adapted for thousands of years, that allows deciphering daily and calendar time. Here we studied the impact of different photoperiod (natural, sustained winter solstice) and temperature (natural, ~ + 4° C) combinations, on gill NKA, plasma free triiodothyronine (T3) and thyroxine (T4), and melatonin (MEL; the time-keeping hormone), throughout smoltification. We also studied the impact of temperature history on pineal gland MEL production in vitro. The spring increase in gill NKA was less pronounced in smolts kept under sustained winter photoperiod and/or elevated temperature. Plasma thyroid hormone levels displayed day–night variations, which were affected by elevated temperature, either independently from photoperiod (decrease in T3 levels) or under natural photoperiod exclusively (increase in T4 nocturnal levels). Nocturnal MEL secretion was potentiated by the elevated temperature, which also altered the MEL profile under sustained winter photoperiod. Temperature also affected pineal MEL production in vitro, a response that depended on previous environmental acclimation of the organ. The results support the view that the salmon pineal is a photoperiod and temperature sensor, highlight the complexity of the interaction of these environmental factors on the endocrine system of S. salar , and indicate that climate change might compromise salmon’s time “deciphering” during smoltification, downstream migration and seawater residence.

Journal of Comparative Physiology B: Biochemical, ↗

USGS2022

Seasonal impoundment management reduces nitrogen cycling but not resilience to surface fire in a tidal wetland

Hydrology and salinity regimes of many impounded wetlands are manipulated to provide seasonal habitats for migratory waterfowl , with little-known consequences for ecosystem structure and function. Managed hydrology can alter ecosystems by directly changing soil properties and processes and by influencing plant community dynamics. Additionally, management history may influence ecosystem response to disturbance, including fires. To better understand how wetland management regime influences ecosystem response to disturbance, we quantified elevation, soil nitrogen concentrations and process rates, and plant community structure and diversity in a natural experiment following the 2018 Branscombe Fire. We measured paired burned-unburned patches in both tidally-influenced and managed, seasonally-impounded wetlands in Suisun Marsh, California, USA. Unburned ecosystem structure and nutrient cycling differed by wetland management history; unburned impounded wetlands were ∼1 m lower in elevation and plant community composition was dominated by succulents whereas the unburned tidal wetland was dominated by graminoids. Unburned impounded wetland soil nitrogen cycling (potential nitrification and denitrification) rates were <28% of those measured in unburned tidal wetland soils and soil extractable nitrate, ammonium, and dissolved inorganic phosphorus concentrations were also substantially lower in unburned impounded than unburned tidal wetlands. Despite these differences in pre-disturbance (i.e., unburned) conditions, all soil processes recovered to baseline levels within 6 months after surface fire, and we found no evidence of plant community change 1 year after fire in either wetland management type. Overall, water management history exerted stronger control on ecosystem processes and structure than surface fire disturbance. Low extractable soil nitrate and potential denitrification rates may indicate limitation of soil nitrogen removal in impounded wetlands, with implications for downstream environmental quality and eutrophication across managed landscapes.

California↗

USGS2020

Longer-lived tropical songbirds reduce breeding activity as they buffer impacts of drought

Droughts are expected to increase in frequency and severity with climate change. Population impacts of such harsh environmental events are theorized to vary with life history strategies among species. However, existing demographic models generally do not consider behavioural plasticity that may modify the impact of harsh events. Here we show that tropical songbirds in the New and Old Worlds reduced reproduction during drought, with greater reductions in species with higher average long-term survival. Large reductions in reproduction by longer-lived species were associated with higher survival during drought than predrought years in Malaysia, whereas shorter-lived species maintained reproduction and survival decreased. Behavioural strategies of longer-lived, but not shorter-lived, species mitigated the effect of increasing drought frequency on long-term population growth. Behavioural plasticity can buffer the impact of climate change on populations of some species and differences in plasticity among species related to their life histories are critical for predicting population trajectories.

Nature Climate Change↗

USGS2026

Determining Volcanic Risk in Auckland (DEVORA) Research Programme—A transdisciplinary approach to address the challenge of distributed volcanism in an urban environment

The Determining Volcanic Risk in Auckland (DEVORA) Research Programme was launched in 2008 to address the challenges associated with monogenetic volcanism in an urban setting and to enhance volcanic risk management in Tāmaki Makaurau Auckland in Aotearoa New Zealand. It is a multi-agency, increasingly transdisciplinary (defined here as research that transcends traditional disciplinary boundaries by integrating diverse types of knowledge, perspectives, and methods from academic and non-academic participants to create novel solutions to complex problems), and collaborative research program jointly led by Waipapa Taumata Rau University of Auckland and Earth Sciences New Zealand (ESNZ; formerly GNS Science), with core funding from Natural Hazards Commission Toka Tū Ake (NHC; formerly the Earthquake Commission, EQC) and Te Kaunihera o Tāmaki Makaurau Auckland Council (AC). The primary research focus of DEVORA is to investigate the geologic history, volcanic hazards, and risk posed by the basaltic intraplate Auckland Volcanic Field. Disruption from ash fall and gas from other Aotearoa New Zealand volcanoes is also considered. DEVORA’s work to explore exposure and vulnerability in Tāmaki Makaurau Auckland is also useful for assessing risks from other non-volcanic natural hazards, such as seismic and tsunami hazards. The greater Tāmaki Makaurau Auckland region has an ethnically and socio-economically diverse population of approximately 1.7 million, representing about one-third of the Aotearoa New Zealand population, and hosts critical infrastructure of national significance. The size and nature of the populace, consequential economic base, and important infrastructure within Tāmaki Makaurau Auckland mean that the effects of a volcanic eruption would be felt nationally, including through the disruption of air travel to Aotearoa New Zealand. The hazards from such an eruption could potentially affect hundreds of thousands of people, businesses, and lifelines (critical infrastructure). A considerable challenge for emergency and risk managers is the monogenetic nature of the volcanic field. It is not known where or when the next eruption will occur, how much warning we may get before an eruption, nor how an eruption and its effects might unfold. In this contribution, we highlight the concept and collaborative intent of the DEVORA Programme and show how it has evolved over the 16 years since its inception. We describe how DEVORA has unified more than 100 researchers (including more than 50 graduate students) and numerous stakeholders to address key issues facing Tāmaki Makaurau Auckland and describe how research findings are being implemented into policy and communicated to stakeholder agencies and the public. We also illustrate the broader influence of the DEVORA Programme and provide some learnings that might benefit others embarking on similar integrated projects, especially those focused on distributed volcanism in and near populated areas.

Auckland↗

USGS2013

Capture-recapture methodology

Capture-recapture methods were initially developed to estimate human population abundance, but since that time have seen widespread use for fish and wildlife populations to estimate and model various parameters of population, metapopulation, and disease dynamics. Repeated sampling of marked animals provides information for estimating abundance and tracking the fate of individuals in the face of imperfect detection. Mark types have evolved from clipping or tagging to use of noninvasive methods such as photography of natural markings and DNA collection from feces. Survival estimation has been emphasized more recently as have transition probabilities between life history states and/or geographical locations, even where some states are unobservable or uncertain. Sophisticated software has been developed to handle highly parameterized models, including environmental and individual covariates, to conduct model selection, and to employ various estimation approaches such as maximum likelihood and Bayesian approaches. With these user-friendly tools, complex statistical models for studying population dynamics have been made available to ecologists. The future will include a continuing trend toward integrating data types, both for tagged and untagged individuals, to produce more precise and robust population models.

Book chapter↗

USGS2008

Ecological community integration increases with added trophic complexity

The existence of functional biological organization at the level of multi-species communities has long been contested in ecology and evolutionary biology. I found that adding a trophic level to simulated ecological communities enhanced their ability to compete at the community level, increasing the likelihood of one community forcing all or most species in a second community to extinction. Community-level identity emerged within systems of interacting ecological networks, while competitive ability at the community level was enhanced by intense within-community selection pressure. These results suggest a reassessment of the nature of biological organization above the level of species, indicating that the drive toward biological integration, so prominent throughout the history of life, might extend to multi-species communities.

Ecological Complexity↗

USGS2010

Geologic nozzles

Sonic velocities of geologic fluids, such as volcanic magmas and geothermal fluids, can be as low as 1 m/s. Critical velocities in large rivers can be of the order of 1–10 m/s. Because velocities of fluids moving in these settings can exceed these characteristic velocities, sonic and supersonic gas flow and critical and supercritical shallow-water flow can occur. The importance of the low characteristic velocities of geologic fluids has not been widely recognized, and as a result, the importance of supercritical and supersonic flow in geological processes has generally been underestimated. The lateral blast at Mount St. Helens, Washington, propelled a gas heavily laden with dust into the atmosphere. Because of the low sound speed in this gas (about 100 m/s), the flow was internally supersonic. Old Faithful Geyser, Wyoming, is a converging-diverging nozzle in which liquid water refilling the conduit during the recharge cycle changes during eruption into a two-phase liquid-vapor mixture with a very low sound velocity. The high sound speed of liquid water determines the characteristics of harmonic tremor observed at the gyeser during the recharge interval, whereas the low sound speed of the liquid-vapor mixture influences the fluid flow characteristics of the eruption. At the rapids of the Colorado River in the Grand Canyon, Arizona, the channel is constricted into the shape of a converging-diverging nozzle by debris flows that enter from tributary canyons. Both subcritical and supercritical flow occur within the rapids. The transport capacity in the rapids can be so great that the river contours the channel to a characteristic shape. This shape can be used to interpret the flood history of the Colorado River over the past 10³–10 5 years. The unity of fluid mechanics in these three natural phenomena is provided by the well-known analogy between gas flow and shallow-water flow in converging-diverging nozzles.

Arizona, Washington, Wyoming↗