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At least 631 records · Page 35Linked to original sources

Development of genomic markers for monitoring and research on plethodontid salamanders

Despite the importance of plethodontid salamanders and their vulnerability to ongoing environmental change, they are inherently difficult to monitor due to their cryptic nature. Recent advances in genomics have created new opportunities for monitoring of populations and their responses to environmental perturbations. In this study, we developed a new target capture-based genomic panel for the purposes of genetic monitoring in plethodontid salamanders. We demonstrate its utility in several distantly related species and present an example application in two representative species with co-occurring distributions but different ecological attributes and expected patterns of population structure: Plethodon jordani and Desmognathus wrighti . Although the number of successfully assembled loci declined with phylogenetic distance from the original reference species ( Desmognathus spp), we obtained high-quality data from thousands of loci from species in all four genera tested ( Desmognathus , Plethodon , Eurycea , and Gyrinophilus ), which span the deepest split in Plethodontidae. Landscape genetic analyses detected weak but statistically significant geographic structure in P. jordani , and much stronger geographic structure in D. wrighti , as expected based on the lower population density and likely lower dispersal ability of D. wrighti . Our target capture panel is broadly applicable across salamanders in Plethodontidae and has the potential to provide data for a wide range of phylogenetic, biogeographic, and population genetics research questions.

North Carolina, Tennessee↗

Aquatic invasive species: Lessons from cancer research

Aquatic invasive species are disrupting ecosystems with increasing frequency. Successful control of these invasions has been rare: Biologists and managers have few tools for fighting aquatic invaders. In contrast, the medical community has long worked to develop tools for preventing and fighting cancer. Its successes are marked by a coordinated research approach with multiple steps: prevention, early detection, diagnosis, treatment options and rehabilitation. The authors discuss how these steps can be applied to aquatic invasive species, such as the American bullfrog (Lithobates catesbeianus), in the Northern Rocky Mountain region of the United States, to expedite tool development and implementation along with achievement of biodiversity conservation goals.

American Scientist↗

A digital underwater video camera system for aquatic research in regulated rivers

We designed a digital underwater video camera system to monitor nesting centrarchid behavior in the Tallapoosa River, Alabama, 20 km below a peaking hydropower dam with a highly variable flow regime. Major components of the system included a digital video recorder, multiple underwater cameras, and specially fabricated substrate stakes. The innovative design of the substrate stakes allowed us to effectively observe nesting redbreast sunfish Lepomis auritus in a highly regulated river. Substrate stakes, which were constructed for the specific substratum complex (i.e., sand, gravel, and cobble) identified at our study site, were able to withstand a discharge level of approximately 300 m 3 /s and allowed us to simultaneously record 10 active nests before and during water releases from the dam. We believe our technique will be valuable for other researchers that work in regulated rivers to quantify behavior of aquatic fauna in response to a discharge disturbance.

Alabama↗

Conflicting research on the demography, ecology, and social behavior of Gunnison's prairie dogs ( Cynomys gunnisoni )

Gunnison's prairie dogs ( Cynomys gunnisoni ) are rare, diurnal, colonial, burrowing, ground-dwelling squirrels. Studies of marked individuals living under natural conditions in the 1970s, 1980s, and 1990s showed that males are heavier than females throughout the year; that adult females living in the same territory are consistently close kin; and that females usually mate with the sexually mature male(s) living in the home territory. Research from 2007 through 2010 challenges all 3 of these findings. Here we discuss how different methods might have led to the discrepancies.

Journal of Mammalogy↗

Research and management priorities for Hawaiian forest birds

Hawai‘i's forest birds face a number of conservation challenges that, if unaddressed, will likely lead to the extinction of multiple species in the coming decades. Threats include habitat loss, invasive plants, non-native predators, and introduced diseases. Climate change is predicted to increase the geographic extent and intensity of these threats, adding urgency to implementation of tractable conservation strategies. We present a set of actionable research and management approaches, identified by conservation practitioners in Hawai'i, that will be critical for the conservation of Hawaiian forest birds in the coming years. We also summarize recent progress on these conservation priorities. The threats facing Hawai‘i's forest birds are not unique to Hawai‘i, and successful conservation strategies developed in Hawai‘i can serve as a model for other imperiled communities around the world, especially on islands.

Hawai‘i↗

Land cover characterization and land surface parameterization research

The understanding of land surface processes and their parameterization in atmospheric, hydrologic, and ecosystem models has been a dominant research theme over the past decade. For example, many studies have demonstrated the key role of land cover characteristics as controlling factors in determining land surface processes, such as the exchange of water, energy, carbon, and trace gases between the land surface and the lower atmosphere. The requirements for multiresolution land cover characteristics data to support coupled-systems modeling have also been well documented, including the need for data on land cover type, land use, and many seasonally variable land cover characteristics, such as albedo, leaf area index, canopy conductance, surface roughness, and net primary productivity. Recently, the developers of land data have worked more closely with the land surface process modelers in these efforts.

Ecological Applications↗

The rising tide of ocean diseases: Unsolved problems and research priorities

New studies have detected a rising number of reports of diseases in marine organisms such as corals, molluscs, turtles, mammals, and echinoderms over the past three decades. Despite the increasing disease load, microbiological, molecular, and theoretical tools for managing disease in the world's oceans are under-developed. Review of the new developments in the study of these diseases identifies five major unsolved problems and priorities for future research: (1) detecting origins and reservoirs for marine diseases and tracing the flow of some new pathogens from land to sea; (2) documenting the longevity and host range of infectious stages; (3) evaluating the effect of greater taxonomic diversity of marine relative to terrestrial hosts and pathogens; (4) pinpointing the facilitating role of anthropogenic agents as incubators and conveyors of marine pathogens; (5) adapting epidemiological models to analysis of marine disease.

Frontiers in Ecology and the Environment↗

Using structured decision-making to develop a communications strategy for the U.S. Geological Survey Cooperative Research Units Program

Communication regarding the mission of the U.S. Geological Survey (USGS) Cooperative Research Units Program (CRU) can take many forms, yet clear and concise messaging for various audiences is critical to highlight program accomplishments and increase visibility. Before the work described in this report, CRU did not have a communication strategy; therefore, CRU leadership supported a structured decision-making (SDM) workshop to develop a comprehensive strategy for multiple audiences. The workshop was conducted in November 2024, in Nebraska City, Nebraska. The working group for this SDM process included CRU Program leadership, the CRU Communications Team lead, Unit scientists, a Unit administrative assistant, a representative of the Wildlife Management Institute (WMI), a member of the USGS Ecosystems Mission Area (EMA), Office of Communications and Publishing (OCAP) team, and the team lead for the CRU Program strategic planning process, as well as three facilitators who were also unit scientists as well as experts in SDM. Over the course of a week, the SDM team followed the PrOACT framework which identified the problem, objectives, alternatives, consequences, and tradeoffs to guide us toward a strategy for implementation of a set of actions for CRU communications. Results of the SDM workshop included the development of a problem statement, an objectives hierarchy, a suite of alternatives that were evaluated using a consequences table and a clear process for assessing tradeoffs among alternative communication actions and strategies. Through the evaluation of consequences of each action or campaign, the team developed both the assessment tool (for the future) and an immediate plan for communication product development and distribution. The consequences table for this problem was meant to be flexible to accommodate changes in CRU thematic priorities and can be easily updated with new objectives, measures, and alternatives. In addition, the weight placed on objectives may change as the Team moves forward; the ranking and scoring system used in the workshop can be easily updated. Overall, the working group identified three different actions or campaigns—Fact Sheets, Who Are We Campaign, and Alumni Campaign—that scored high in the prototype decision framework. However, the tradeoffs analysis indicated that each action(s) performed better on some objectives than others. The working group identified a need to therefore develop an implementation plan that is composed of individual actions that each target different objectives to potentially create a holistic and feasible communications strategy that performs well for all objectives. In addition, the SDM prototype developed a scalable, objective-based framework for effectively communication of the value and accomplishments of the CRU program.

Preprints.org↗

Research in coal paleobotany since 1943

The varied applications of paleobotany to coal resource studies, coal technology, and to fundamental physical and chemical research on coal are briefly indicated. The usual conception of paleobotany is not as broad as this, and many of the studies of fossil plants have been conducted without reference to the part the plant materials assume in composing coal. The interrelationship of paleobotany with the physical constitution and petrography of coal is an intimate one. which is too involved for treatment in the present paper. Chief emphasis is devoted to review of plant microfossil investigations during the past several years.The consistent abundance of plant microfossils in coal and its associated rocks is now generally recognized. One of the greatest difficulties in using this material for correlation and for extending our knowledge of the plant composition of coal has been in systematic (taxonomic) treatment of the materials. The reviews of recent literature are presented chiefly with reference to the diverse systematic approaches of various authors. The contrast between essentially nonbotanical or morphologic classification schemes, which are simpler to apply and which may serve adequately for local correlational studies, and those studies conceived on a more fundamental basis of plant taxonomy, for paleogeographic and ecologic interpretation of botanically related groups, is presented. Both viewpoints should be kept clearly in mind, since differing circumstances of study and differing objectives may suggest the advisability of using one rather than the other method of systematic treatment of these fossils. No other fossils are so conveniently available from the coal deposits of primary interest.

Economic Geology↗

Research activities at U.S. Government agencies in subsurface reactive transport modeling

The fate of contaminants in the environment is controlled by both chemical reactions and transport phenomena in the subsurface. Our ability to understand the significance of these processes over time requires an accurate conceptual model that incorporates the various mechanisms of coupled chemical and physical processes. Adsorption, desorption, ion exchange, precipitation, dissolution, growth, solid solution, redox, microbial activity, and other processes are often incorporated into reactive transport models for the prediction of contaminant fate and transport. U.S. federal agencies use such models to evaluate contaminant transport and provide guidance to decision makers and regulators for treatment issues. We provide summaries of selected research projects and programs to demonstrate the level of activity in various applications and to present examples of recent advances in subsurface reactive transport modeling.

Vadose Zone Journal↗

UZIG research: Measurement and characterization of unsaturated zone processes under wide-ranging climates and changing conditions

Unsaturated zone properties and processes are central to understanding the interacting effects of land-use change, contamination, and hydroclimate on our ability to grow food, sustain clean water supplies, and minimize loss of life and property. Advances in unsaturated zone science are being achieved through collaborations across traditional boundaries where information from biological, physical, and chemical disciplines is combined for new insights. The Unsaturated Zone Interest Group (UZIG) is an organization that exists principally to promote multidisciplinary collaborations and the sharing of ideas, expertise, and technical assets. Here we summarize key findings from 14 papers, several of which originated from a meeting convened by UZIG in 2017 at the University of Florida in Gainesville titled “Land-Use Change, Climate Change, and Hydrologic Extremes: Unsaturated Zone Responses and Feedbacks.” This special section of Vadose Zone Journal contains multidisciplinary research in three general categories relevant to measuring and understanding unsaturated zone responses to changing land uses and climate: (i) unsaturated zone properties and processes; (ii) soil–plant–atmosphere interactions; and (iii) novel field sampling devices. A strong cross-cutting theme in these papers is the value of continuous monitoring data and ways of utilizing them to discover novel hydrologic, biologic, and pedologic information. As climatic and land-use conditions change and demands for resources and stresses on ecosystems continue to intensify, it is vital to improve our fundamental understanding of the processes at work in the unsaturated zone. Toward that goal, we discuss the need for improved ground-based unsaturated zone monitoring networks.

Vadose Zone Journal↗

The foods of fur animals of the Patuxent Research Refuge, Maryland

Approximately 300 digestive tracts of fur animals obtained mostly during the winter trapping season and 560 scats from animals live-trapped on the Patuxent Research Refuge near Laurel, Maryland, were analyzed. The resulting data are summarized and a brief description of the area and important habitat types is given. The animals studied include the raccoon, red fox, gray fox, mink, New York weasel, skunk, opossum, and house cat.

Maryland↗

Nesting of hooded mergansers of the Patuxent Wildlife Research Center, Laurel, Maryland

The first known record of Hooded Mergansers ( Lophodytes cucullatus ) nesting on the coastal plain of Maryland was in 1961, when Mr. Francis Uhler (pers. comm) found two clutches in Wood Duck nest boxes in impoundments at the Patuxent Wildlife Research Center, about five miles southeast of Laurel, Maryland. R.E. Stewart and C.S. Robbins (“Birds of Maryland and the District of Columbia,” N. Amer. Fauna no. 62, 1958; see p. 102) reported two records of broods for Maryland, one for the Piedmont and one for the mountains.

Maryland↗

Assessing the effects of fire disturbances on ecosystems: A scientific agenda for research and management

A team of fire scientists and resource managers convened 17-19 April 1996 in Seattle, Washington, to assess the effects of fire disturbance on ecosystems. Objectives of this workshop were to develop scientific recommendations for future fire research and management activities. These recommendations included a series of numerically ranked scientific and managerial questions and responses focusing on (1) links among fire effects, fuels, and climate; (2) fire as a large-scale disturbance; (3) fire-effects modeling structures; and (4) managerial concerns, applications, and decision support. At the present time, understanding of fire effects and the ability to extrapolate fire effects knowledge to large spatial scales are limited, because most data have been collected at small spatial scales for specific applications. Although we clearly need more large-scale fire-effects data, it will be more expedient to concentrate efforts on improving and linking existing models that simulate fire effects in a georeferenced format while integrating empirical data as they become available. A significant component of this effort should be improved communication between modelers and managers to develop modeling tools to use in a planning context. Another component of this modeling effort should improve our ability to predict the interactions of fire and potential climatic change at very large spatial scales. The priority issues and approaches described here provide a template for fire science and fire management programs in the next decade and beyond.

General Technical Report↗

Invasive species research

The Leetown Science Center’s research provides information on early detection and assessment, ecological effects and new methods of control of invasive species.

Fact Sheet↗

Wildlife research

Wildlife research conducted by scientists at the Leetown Science Center helps client bureaus to better manage federal lands and trust species by making objective, science-based decisions.

Fact Sheet↗