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Cruise report RV Ocean Surveyor cruise O-1-00-GM the bathymetry and acoustic backscatter of the Pinnacles area, northern Gulf of Mexico May 23, through June 10, 2000 Venice, LA to Venice, LA

An extensive deep (~100 m) reef tract occurs on the Mississippi-Alabama outer continental shelf (OCS). The tract, known as "The Pinnacles", is apparently part of a sequence of drowned reef complexes along the "40-fathom" shelf edge of the northern Gulf of Mexico (Ludwick and Walton, 1957). It is critical to determine the accurate geomorphology of deep-reefs because of their importance as benthic habitats for fisheries. The Pinnacles were mapped by Ludwick and Walton (1957) using a single-beam echo sounder but the spatial extent and morphology were interpreted from a series of widely separated, poorly navigated bathymetric profiles. Other recent studies, supported by Minerals Management Service (MMS), used towed sidescan sonars and single-channel seismic-reflection profiling. None of the existing studies provide the quality of geomorphic data necessary for reasonable habitat studies. The fish faunas of shallow hermatypic reefs have been well studied, but those of deep ahermatypic reefs have relatively ignored. The ecology of deep ahermatypic reefs is fundamentally different from hermatipic reefs because autochthonous intracellular symbiotic zooxanthellae (the carbon source for hermatypic corals) do not form the base of the trophic web. Instead, exogenous plankton, transported to the reef by currents, serves as the primary carbon source. Deep OCS reefs also lie below the practical working depths for SCUBA; consequently, remote investigations from a ship or in situ investigations using submersibles or ROVs are required. Community structure and trophodynamics of demersal fishes of the Pinnacles are presently the focus of USGS reseach. A goal of the research is to answer questions concerning the relataive roles played by geomorphology and surficial geology in the interaction with and control of biological differentiation. OCS reefs are important because we now know that such areas are important coral reef fish havens, key spawning 2 sites, and a critical early larval and juvenile habitats for economically important sport/food fishes. Also, deep-reef ecosystems as well as the fish populations they sustain are impacted by intensive oil-field development. It is now known that deep OCS reefs function as a key source of re-population (via seasonal and ontogenetic migration) of already heavily impacted inshore reefs. A reflection of this realization is the recent closure by the Gulf States Fisheries Management Council of a 600 mi 2 area of the Florida Middle Grounds (another unmapped major "40-fathom" OCS reef complex) to commercial fishing to preserve grouper spawning aggregations. It is known that the Pinnacles reefs support a lush fauna of ahermatypic hard corals, soft corals, black corals, sessile crinoids and sponges—together forming a living habitat for a well-developed fish fauna. The fish fauna comprises typical Caribbean reef fishes and Carolinian shelf fishes, plus epipelagic fishes, and a few deep-sea fishes. The base of the megafaunal invertebrate food web is plankton, borne by essentially continuous semi-laminar currents flowing predominantly out of the SW, up, along and across the shelf edge. These currents are intercepted by pinnacles reefs, which lie roughly in two linear tracts, parallel to the coastline (see fig. 1 in report). USGS research initiated in 1997 (Sulak et al., in progress) has demonstrated that the Pinnacles reef fish fauna is dominated by planktivorous fishes. Ongoing food habits, trophic web and stable isotope analyses by the USGS are reinforcing a basic picture of deep OCS reefs as ecosystems based on exogenous current-borne plankton. Long-term current meter deployments have demonstrated that the >3 m, <16m relief of the Pinnacles reefs disrupts the prevailing currents, inducing local complexity (F. Kelly, Texas A&M Univ., pers. comm.) favorable to plankton and planktivores. Geodetically accurate bathymetry maps, coregistered with calibrated acoustic backscatter maps, are critical to delineate benthic biotopes, and are essential to correlate biological community differentiation with the physical environment. Previous mapping of the Pinnacles area using the TAMU towed single-beam sidescan system (Anonymous., 1999) employed technology with inherent deficiencies in backscatter calibration, bathymetric precision, and geo-referencing. The resulting bathymetric interpretations of TAMU data are further degraded by ship-track-parallel artifacts that obliterate geomorphology rendering them inadequate to provide high-resolution mapping of individual target reefs (typical maximum relief 15 m, diameter 200-500 m). The sidescan-sonar surveys of the area (Laswell et al., 1990) suffer many of the same deficiencies as the TAMU data so they add no quantitative and little qualitative information about the geomorphology and surficial geology.

Gulf of Mexico, the Pinnacles area↗

Challenges and opportunities for Sendai framework disaster loss reporting in the United States

The Sendai Framework for Disaster Risk Reduction provides quantitative indicators for nations to measure progress in the reduction of disaster losses. The collection and analysis of disaster loss data under the Sendai Framework improves our understanding of the effectiveness of national disaster risk reduction strategies and interventions. The Sendai Framework has enhanced cooperation among Federal agencies to collect and track disaster loss data in the U.S., yet challenges remain for reporting disaster losses. Based on our experiences collecting and reporting U.S. data to the Sendai Monitor, we identify opportunities to improve disaster loss reporting in the U.S.

Progress in Disaster Science↗

The Alaska earthquake, March 27, 1964: Field investigations and reconstruction effort

One of the greatest geotectonic events of our time occurred in southern Alaska late in the afternoon of March 27, 1964. Beneath a leaden sky, the chill of evening was just settling over the Alaskan countryside. Light snow was falling on some communities. It was Good Friday, schools were closed, and the business day was ending. Suddenly without warning half of Alaska was rocked and jarred by the most violent earthquake to occur in North America this century. The descriptive summary that follows is based on the work of many investigators. A large and still-growing scientific literature has accumulated since the earthquake, and this literature has been freely drawn upon here. In particular, the writers have relied upon the findings of their colleagues in the Geological Survey. Some of these findings have been published, but some are still being prepared for publication. Moreover, some field investigations are still in progress. This is the first in a series of six reports that the U.S. Geological Survey published on the results of a comprehensive geologic study that began, as a reconnaissance survey, within 24 hours after the March 27, 1964, Magnitude 9.2 Great Alaska Earthquake and extended, as detailed investigations, through several field seasons. The 1964 Great Alaska earthquake was the largest earthquake in the U.S. since 1700. Professional Paper 541, in 1 part, describes Field Investigations and Reconstruction Effort.

Alaska↗

Preliminary geologic map of the Lunenburg and Fort Mitchell 7.5' quadrangles, Virginia

The Lunenburg and Fort Mitchell 7.5' quadrangles have been mapped as part of the Geology of the South-Central Virginia Piedmont Project, a regional geologic mapping project of the U.S. Geological Survey. The two quadrangles include parts of Lunenburg, Mecklenburg, and Charlotte counties, and are located in the east-central part of the South Boston 30'x60' quadrangle (Figure 1). A preliminary geologic map of this quadrangle has been published (Norton and others, 1993), and a reconnaissance map by Laney (1917) includes the western Fort Mitchell quadrangle. Aeromagnetic and aeroradioactivity maps that include the field area have been published by the U.S. Geological Survey (1978a, 1978b). The Lunenburg and Fort Mitchell quadrangles are adjacent to the north and northwest, respectively, to the previously mapped Wightman 7.5' quadrangle (Burton, 1993; Figure 1). With respect to geologic provinces, the Lunenburg and Fort Mitchell quadrangles are located within the Carolina slate belt of the Carolina Terrane (Figure 1) and have not been previously mapped in detail. The Carolina slate belt in this area consists of volcanic and sedimentary rocks and associated intrusive igneous rocks that possess a regional slatey cleavage and have been subjected to lower greenschistfacies metamorphism. An earlier, pre-cleavage deformation and low-grade metamorphism may have occurred in the Late Proterozoic (Glover and Sinha, 1973). The rocks are locally poorly dated but probably are Late Proterozoic and Early Cambrian in age (Butler and Secor, 1991, and references therein). The Carolina slate belt may represent a subduction-related volcanic arc (Butler and Secor, 1991), or riftedarc complex (Feiss and others, 1993). Geochemical analysis and radioisotopic dating (U-Pb and 40 Ar/ 39 Ar) of slate belt rocks in the South Boston 30 x 60' quadrangle by the U.S.G.S. are in progress.

Virginia↗

Analyses of natural gases from Gulf of Mexico Outer Continental Shelf

This report contains analyses and related source data for natural gas samples from 32 fields in the Gulf of Mexico OCS (Outer Continental Shelf). The interpretation of this data, along with analyses from other fields in Texas, is still in progress.

Gulf of Mexico Outer Continental Shelf↗

U.S. Geological Survey middle Rio Grande basin study; proceedings of the third annual workshop, Albuquerque, New Mexico, February 24-25, 1999

Approximately 40 percent (about 600,000 people) of the total population of New Mexico lives within the Middle Rio Grande Basin, which includes the City of Albuquerque. Ongoing analyses of the central portion of the Middle Rio Grande Basin by the U.S. Geological Survey (USGS) in cooperation with the City of Albuquerque and other agencies have shown that ground water in the basin is not as readily accessible as earlier studies indicated. A more complete characterization of the ground-water resources of the entire Middle Rio Grande Basin is hampered by a scarcity of data in the northern and southern areas of the basin. The USGS Middle Rio Grande Basin study is a 5-year effort by the USGS and other agencies to improve the understanding of the hydrology, geology, and land-surface characteristics of the Middle Rio Grande Basin. The primary objective of this study is to improve the understanding of the water resources of the basin. Of particular interest is to determine the extent of hydrologic connection between the Rio Grande and the Santa Fe Group aquifer. Additionally, ground-water quality affects the availability of water supplies in the basin. Improving the existing USGS-constructed ground-water flow model of the Middle Rio Grande Basin will integrate all the various tasks that improve our knowledge of the various components of the Middle Rio Grande water budget. Part of this improvement will be accompanied by extended knowledge of the aquifer system beyond the Albuquerque area into the northern and southern reaches of the basin. Other improvements will be based on understanding gained through process-oriented research and improved geologic characterization of the deposits. The USGS and cooperating agencies will study the hydrology, geology, and land-surface characteristics of the basin to provide the scientific information needed for water-resources management and for managers to plan for water supplies needed for a growing population. To facilitate exchange of information among the scientists working on the Middle Rio Grande Basin study, yearly technical meetings have been held for each of the first 3 years of the anticipated 5-year study. These meetings provide an opportunity to present research results and plan new field efforts. This report documents the results of research presented at the third annual technical workshop held in Albuquerque, New Mexico, February 24-25, 1999. The report is organized into this introduction and five chapters that focus on Middle Rio Grande Basin study investigations in progress in the Middle Rio Grande Basin. The first chapter describes geographic data and analysis efforts in the basin. The second chapter details work being done on the hydrogeologic and geologic framework of the basin. The third chapter describes studies on ground-water recharge in the basin. The fourth chapter provides details on the research on the ground-water flow system in the basin, including modeling efforts. The fifth chapter is devoted to an overview of New Mexico District Cooperative Program studies in the basin. The information in this report presents preliminary results of an evolving study. As the study progresses and individual projects publish their results in more detail, the USGS hopes to expand the scientific basis needed for management decisions regarding the Middle Rio Grande Basin.

Open-File Report↗

The worldwide search for petroleum offshore; a status report for the quarter century, 1947-72

At the end of 1972, offshore petroleum exploration was in progress on the submerged continental margins of 80 countries. Some 780 oil and gas fields had been discovered. Estimated worldwide volume of oil discovered offshore as of January 1, 1973, is 172.8 billion barrels of oil, or about 26 percent of the world total, and 168.4 trillion ft3 of natural gas. Present reserves of oil are 135.5 billion barrels, of which 70 percent is in the Persian Gulf. Some 90 percent of the oil discovered offshore has been found in 60 giant fields having reserves of 500 million or more barrels each.

Circular↗

Underground-water investigation in Utah: A part of Chapter 5 in Twenty-third biennial report of the State Engineer to the governor of Utah: 1940-1942

Systematic underground-water investigations have been in progress in the State of Utah since 1935 by the Federal Geological Survey in cooperation with the state engineer. The general plan and outline of these investigations, together with a summary of results accomplished to June 30, 1940, are given in the Twentieth, Twenty-first, and Twenty-second biennial reports of the state engineer to the governor of Utah. The investigations include two important phases: (1) A determination of the fluctuations of water levels and artesian pressures in most of the underground-water areas in the state, based on periodic measurements with steel tapes and on charts of automatic water-state recorders and pressure recorders, and (2) detailed investigations of individual underground-water areas to determine the source, movement, disposal, quantity, and quality of underground water, and to show the relation of present development to the maximum economic development of those areas. The aim of the investigation is to determine and make available factual data as to underground-water conditions in the different areas of the state so that they may serve to guide the state engineer in an equitable adjudication of underground-water resources.

Utah↗

User's guide to revised method-of-characteristics solute-transport model (MOC--version 31)

The U.S. Geological Survey computer model to simulate two-dimensional solute transport and dispersion in ground water (Konikow and Bredehoeft, 1978; Goode and Konikow, 1989) has been modified to improve management of input and output data and to provide progressive run-time information. All opening and closing of files are now done automatically by the program. Names of input data files are entered either interactively or using a batch-mode script file. Names of output files, created automatically by the program, are based on the name of the input file. In the interactive mode, messages are written to the screen during execution to allow the user to monitor the status and progress of the simulation and to anticipate total running time. Information reported and updated during a simulation include the current pumping period and time step, number of particle moves, and percentage completion of the current time step. The batch mode enables a user to run a series of simulations consecutively, without additional control. A report of the model's activity in the batch mode is written to a separate output file, allowing later review. The user has several options for creating separate output files for different types of data. The formats are compatible with many commercially available applications, which facilitates graphical postprocessing of model results. Geohydrology and Evaluation of Stream-Aquifer Relations in the Apalachicola-Chattahoochee-Flint River Basin, Southeastern Alabama, Northwestern Florida, and Southwestern Georgia By Lynn J. Torak, Gary S. Davis, George A. Strain, and Jennifer G. Herndon Abstract The lower Apalachieola-Chattahoochec-Flint River Basin is underlain by Coastal Plain sediments of pre-Cretaceous to Quaternary age consisting of alternating units of sand, clay, sandstone, dolomite, and limestone that gradually thicken and dip gently to the southeast. The stream-aquifer system consism of carbonate (limestone and dolomite) and elastic sediments, which define the Upper Floridan aquifer and Intermediate system, in hydraulic connection with the principal rivers of the basin and other surface-water features, natural and man made. Separate digital models of the Upper Flori-dan aquifer and Intermediate system were constructed by using the U.S. Geological Survey's MODular Finite-Element model of two dimensional ground-water flow, based on concep- tualizations of the stream-aquifer system, and calibrated to drought conditions of October 1986. Sensitivity analyses performed on the models indicated that aquifer hydraulic conductivity, lateral and vertical boundary flows, and pumpage have a strong influence on groundwater levels. Simulated pumpage increases in the Upper Floridan aquifer, primarily in the Dougherty Plain physiographic district of Georgia,. caused significant reductions in aquifer discharge to streams that eventually flow to Lake Seminole and the Apalachicola River and Bay. Simulated pumpage increases greater than 3 times the October 1986 rates caused drying ofsome stream reaches and parts of the Upper Floridan aquifer in Georgia. Water budgets prepared from simulation results indicate that ground- water discharge to streams and recharge by horizontal and vertical flow are the principal mechanisms for moving water through the flow system. The potential for changes in ground-water quality is high in areas where chemical constituents can be mobilized by these mechanisms. Less than 2 percent of ground-water discharge to streams comes from the Intermediate system; thus, it plays a minor role in the hydrodynamics of the stream- aquifer system.

Water-Resources Investigations Report↗

Permafrost and ground-water conditions in the Glennallen area, Alaska

This report is an outgrowth of permafrost and geologic field studies now in progress in the southeastern Copper River basin, Alaska and is in response to inquiries for information on permafrost and ground-water conditions. Various private and governmental groups have encountered severe differential settlement of building foundations on permafrost, and consequent maintenance problems. Settlement and expansion of communities in the area also have been retarded by the apparent lack of a ready and large source of potable water. The information below is presented to make available data on permafrost and ground-water conditions for the benefit of those undertaking construction projects in the area.

Alaska↗

Southwest Washington coastal erosion workshop report 2000

This report is a compilation of abstracts that correspond to oral presentations and posters presented at the fifth principal investigators workshop of the Southwest Washington Coastal Erosion Study. The workshop was held November 15 - 17, 2000 at the Department of Ecology headquarters building in Olympia, WA. For the fourth consecutive year in November, the workshop convened the entire multi-disciplinary group of scientists and engineers working on the Study or on related projects within the Columbia River littoral cell (CRLC) (Figures 1 and 2). The workshop participants are listed in the List of Attendees section towards the end of this report. The purpose of this workshop was to bring all Study investigators and associated engineers and scientists together to discuss recent work, ongoing tasks, and future research plans in the CRLC. Investigators were asked to present recent data, preliminary interpretations, and research results to invoke discussion and correlation with parallel scientific efforts. The abstracts compiled in this report represent a wealth of information on the CRLC, but because much of the work is in progress, the reader is advised that the information provided herein is preliminary and subject to change.

Oregon;Washington↗

Tritium/3He measurements in young groundwater: Progress in applications to complex hydrogeological systems

Tritium/3He dating has been applied to many problems in groundwater hydrology including, for example, determination of circulation patterns, mean residence times, recharge rates, or bank infiltration. Here, we discuss recent progress in the application of the tritium/3He dating method to sites with complex hydrogeological settings. Specifically, we report on tritium/3He dating at sites with (a) river infiltration into the basaltic fractured rock aquifer of the Eastern Snake River Plain, and (b) river infiltration through sinkholes into the karstic limestone Upper Floridian aquifer near Valdosta, Georgia.Tritium/3He dating has been applied to many problems in groundwater hydrology including, for example, determination of circulation patterns, mean residence times, recharge rates, or bank infiltration. Here, we discuss recent progress in the application of the tritium/3He dating method to sites with complex hydrogeological settings. Specifically, we report on tritium/3He dating at sites with (a) river infiltration into the basaltic fractured rock aquifer of the Eastern Snake River Plain, and (b) river infiltration through sinkholes into the karstic limestone Upper Floridian aquifer near Valdosta, Georgia.

Conference Paper↗

Geological Survey research 1981

This U.S. Geological Survey activities report includes a summary of 1981 fiscal year scientific and economic results accompanied by a list of geologic, hydrologic, and cartographic investigations in progress. The summary of results includes: (1) Mineral, (2) Water resources, (3) Engineering geology and hydrology, (4) Regional geology, (5) Principles and processes, (6) Laboratory and field methods, (7) Topographic surveys and mapping, (8) Management of resources on public lands, (9) Land information and analysis, and (10) Investigations in other countries. Also included are lists of investigations in progress.

Professional Paper↗

Reporting the limits of detection and quantification for environmental DNA assays

Background Environmental DNA (eDNA) analysis is increasingly being used to detect the presence and relative abundance of rare species, especially invasive or imperiled aquatic species. The rapid progress in the eDNA field has resulted in numerous studies impacting conservation and management actions. However, standardization of eDNA methods and reporting across the field is yet to be fully established, with one area being the calculation and interpretation of assay limit of detection (LOD) and limit of quantification (LOQ). Aims Here, we propose establishing consistent methods for determining and reporting of LOD and LOQ for single‐species quantitative PCR (qPCR) eDNA studies. Materials & Methods/ Results We utilize datasets from multiple cooperating laboratories to demonstrate both a discrete threshold approach and a curve‐fitting modeling approach for determining LODs and LOQs for eDNA qPCR assays. We also provide details of an R script developed and applied for the modeling method. Discussion/Conclusions Ultimately, standardization of how LOD and LOQ are determined, interpreted, and reported for eDNA assays will allow for more informed interpretation of assay results, more meaningful interlaboratory comparisons of experiments, and enhanced capacity for assessing the relative technical quality and performance of different eDNA qPCR assays.

Environmental DNA↗

Wildfire and invasive species in the west: challenges that hinder current and future management and protection of the sagebrush-steppe ecosystem: a Gap Report

The Western Association of Fish and Wildlife Agencies (WAFWA) to satisfy the 45-day report requirement identified in Cooperative Agreement (F13AC00353) between WAFWA and the U. S. Fish and Wildlife Service (FWS) submit this &ldquo;Gap Report&rdquo;. This report summarizes the policy, fiscal and science challenges that land managers encounter related to the control and reduction of the invasive plant/fire complex, especially as it relates to the threaten or endangered species listing status of the Greater sage-grouse ( Centrocercus urophasianus ). While this Gap Report identifies 22 technical, policy, planning and funding gaps, it should be considered a &ldquo;work in-progress&rdquo;. To address this effort a Wildfire/Invasive Initiative Work Group (WG) was formed. The WG consist of nationally recognized experts in fire ecology, Sage-grouse ecology and management, range management and plant ecology. The WG developed this Gap Report and will be developing the final report for this Cooperative Agreement. Thus, as the WG evaluates the wildfire/invasive issue and makes recommendation to address scientific and management shortcomings, additional gaps will be identified and included in the final report. Within this report, the WG has suggested the top 5 gaps. However, the actual priority of what should be addressed first will depend on the significance and sequence of the limiting factor, available funding, current work, roles and responsibilities of the specific agencies, etc. The WG will continue to meet on a regular basis to further develop and expand this list of gaps. Additionally, the WG will offer specific options to address the identified gaps. However, the WG recommends that the FWS, possibly through the State/Federal (Western Governors Association) Sage Grouse Task Force or the National Sage-grouse Executive Oversight Committee, establish a Subcommittee to specifically review this Gap Report and develop a multi-agency approach on how to address each gap. The WG will continue to endeavor to establish a priority list and identify the &ldquo;low hanging fruit&rdquo; that can be addressed in the short-term to affect the listing decision. Additionally, the WG will propose a longer-term strategy. However, to successfully establish such a strategy it will take buy-in and commitment at the highest levels in federal and state governments. In an effort to provide managers an opportunity to address the most important issues this coming fiscal year, we offer the following top 5 gaps. Beyond these top 5, the WG has identified 17 additional gaps that should be evaluated by both federal and state agencies as a means to help better manage the wildfire/invasive threat in the west.

Report↗