Geology Reports⌕ Search

SEARCH · Geology Reports

Results for “Cells”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 613 records · Page 34Linked to original sources

Looking beyond wildlife: Using remote cameras to evaluate accuracy of gridded snow data

The use of remote cameras is widespread in wildlife ecology, yet few examples exist of their utility for collecting environmental data. We used a novel camera trap method to evaluate the accuracy of gridded snow data in a mountainous region of the northeastern US. We were specifically interested in assessing (1) how snow depth observations from remote cameras compare with gridded climate data, (2) the sources of error associated with the gridded data and (3) the influence of spatial sampling on bias. We compared daily observations recorded by remote cameras with Snow Data Assimilation System (SNODAS ) gridded predictions using data from three winters (2014–2016). Snow depth observations were correlated with SNODAS predictions for sites ( R 2 = 0.20) and regions ( R 2 = 0.16), yet we detected factors associated with SNODAS bias at both scales. Specifically, SNODAS underpredicted depths at high elevations, at sites with higher solar radiation, and within conifer‐dominated forest. Depths were most underpredicted at highest elevations, up to 44 and 26 cm on average at the site and region scales, respectively. Bias was greatest when predictions were lowest, occasionally predicting snow absence when depths were >100 cm at camera sites. We also detected breakdowns in accuracy when certain environmental conditions varied within the 1 km 2 SNODAS grid cells. For example, underprediction was greatest when the solar radiation values of camera stations increased relative to the mean of the SNODAS grid cells. This relationship was most prominent in mountainous regions, suggesting that factors which influence solar radiation (e.g. topographic complexity) contribute to SNODAS inaccuracy. We caution using gridded snow data for ecological studies when bias is unknown. We suggest increased sampling to adjust for errors associated with gridded data products that arise from factors, such as forest cover and topographic variability. Increasing resolution and accuracy of climate data will improve predictions of species’ responses to climate change.

New Hampshire, Vermont↗

Preliminary characterization of a virus causing infectious anemia among stocks of salmonid fish in the western United States

Since 1982, anemias occurring in stocks of yearling coho ( Oncorhynchus kisutch ) and chinook salmon (Oncorhynchus tshawytscha ) have been associated with serious losses at hatcheries in the Pacific Northwest, USA. The anemia is often accompanied by infections with external fungus (e.g. Saprolegnia) or the bacterial pathogens Cytophaga psychrophila or Renibacterium salmoninarum (Holt and Rohovec 1984, Leek 1987). The losses associated with the anemia are thought to be caused by these secondary infections. Blood smears that were made from anemic fish and stained with Giemsa or pinacyanol chloride showed erythrocytic inclusions ranging in size from 1 to 8 um and varying in number per cell. Thin sections of infected red blood cells (RBC) examined by electron microscopy revealed virus particles approximately 70 nm in diameter. The virions were scattered in the cytoplasm of the RBC or contained within membrane bound organelles. These virus particles were morphologically distinct from the iridovirus, erythrocytic necrosis virus (ENV), which is also associated with anemia (Holt and Rohovec 1984, Leek 1987). Evidence suggests that the etiological agent of this new anemic disease, termed erythrocytic inclusion body syndrome (EIBS) by Leek (1987), is a previously undescribed virus infecting salmon. The purpose of this study was to experimentally transmit the disease to healthy fish, to determine the blood parameters associated with infection, and to investigate the nature of the virus associated with EIBS.

Book chapter↗

Physiology of seawater acclimation in the striped bass, Morone saxatilis (Walbaum)

Several experiments were performed to investigate the physiology of seawater acclimation in the striped bass, Morone saxatilis . Transfer of fish from fresh water (FW) to seawater (SW; 31–32 ppt) induced only a minimal disturbance of osmotic homeostasis. Ambient salinity did not affect plasma thyroxine, but plasma cortisol remained elevated for 24h after SW transfer. Gill and opercular membrane chloride cell density and Na + ,K + -ATPase activity were relatively high and unaffected by salinity. Average chloride cell size, however, was slightly increased (16%) in SW-acclimated fish. Gill succinate dehydrogenase activity was higher in SW-acclimated fish than in FW fish. Kidney Na + , K + -ATPase activity was slightly lower (16%) in SW fish than in FW fish. Posterior intestinal Na + ,K + -ATPase activity and water transport capacity (J v ) did not change upon SW transfer, whereas middle intestinal Na + ,K + -ATPase activity increased 35% after transfer and was correlated with an increase in J v (110%). As salinity induced only minor changes in the osmoregulatory organs examined, it is proposed that the intrinsic euryhalinity of the striped bass may be related to a high degree of “preparedness” for hypoosmoregulation that is uncommon among teleosts studied to data.

Fish Physiology and Biochemistry↗

Isolation of anaerobic oxalate-degrading bacteria from freshwater lake sediments

Enrichment cultures that anaerobically degraded oxalate were obtained from lake sediment inocula. From these, 5 pure cultures of anaerobic oxalate-degrading bacteria were isolated and partially characterized. The isolates were Gram-negative, non-sporeforming, non-motile, obligate anaerobes. Oxalate was required for growth and was stoichiometrically converted to formate; 14 CO 2 was also recovered when 14 C-oxalate was added. Maximal growth occurred when the oxalate concentration was 50 mM. Acetate stimulated growth in the presence of oxalate, however, 14 C-experiments indicated that acetate was only utilized for cell carbon. The isolates were either spiral-shaped or rod-shaped organisms. The first morphotype grew much more slowly than the second and exhibited 13-fold lower cell yields. These isolates represent a new strain of oxalate-degrading bacteria. The second morphotype was similar to the anaerobic oxalate-degrading bacteria previously found in rumen. This report extends the known habitats in which anaerobic oxalate-degrading organisms have been found to include aquatic sediments.

Archives of Microbiology↗

Determination of water retention in stratified porous materials

Predicted and measured water-retention values, θ ( ψ ), were compared for repacked, stratified core samples consisting of either a sand with a stone-bearing layer or a sand with a clay loam layer in various spatial orientations. Stratified core samples were packed in submersible pressure outflow cells, then water-retention measurements were performed between matric potentials, ψ , of 0 to -100 kPa. Predictions of θ ( ψ ) were based on a simple volume-averaging model using estimates of the relative fraction and θ ( ψ ) values of each textural component within a stratified sample. In general, predicted θ ( ψ ) curves resembled measured curves well, except at higher saturations in a sample consisting of a clay loam layer over a sand layer. In this case, the model averaged the air-entry of both materials, while the air-entry of the sample was controlled by the clay loam in contact with the cell's air-pressure inlet. In situ, avenues for air-entry generally exist around clay layers, so that the model should adequately predict air-entry for stratified formations regardless of spatial orientation of fine versus coarse layers. Agreement between measured and predicted volumetric water contents, θ , was variable though encouraging, with mean differences between measured and predicted θ values in the range of 10%. Differences in θ of this magnitude are expected due to variability in pore structure between samples, and do not indicate inherent problems with the volume averaging model. This suggets that explicit modeling of stratified formations through detailed characterization of the stratigraphy has the potential of yielding accurate θ ( ψ ) values. However, hydraulic-equilibration times were distinctly different for each variation in spatial orientation of textural layering, indicating that transient behavior during drainage in stratified formations is highly sensitive to the stratigraphic sequence of textural components, as well as the volume fraction of each textural component in a formation. This indicates that prolonged residence times of water, nutrients, and pollutants are likely within finer-textured layers, when ψ conditions have resulted in drainage of underlying coarser-textured strata.

Transport in Porous Media↗

Fish rhabdoviruses: Morphology and ultrastructure of North American salmonid isolates

The morphology and ultrastructure of three North American salmonid pathogens, Oregon sockeye salmon, chinook salmon and infectious hematopoietic necrosis viruses, were examined by thin sectioning and negative staining after growth in fathead minnow cells at 10 ° C. The viruses matured at the plasma membrane of these cells. They were approximately 170 nm in length, 70 nm in width and had internal striations with a periodicity of 5.5nm. They were rounded on one end and planar on the other ( i.e. , bullet shaped). By morphological criteria, these viruses are rhabdoviruses with dimensions and ultrastructural features similar to vesicular stomatitis virus.

Archiv Fur Die Gesamte Virusforschung↗

Zinc and lead poisoning in wild birds in the Tri-State Mining District (Oklahoma, Kansas, Missouri)

contaminated with Pb, Cd, and Zn from mining, milling and smelting. Metals have been dispersed heterogeneously throughout the District in the form of milled mine waste ('chat'), as flotation tailings and from smelters as aerial deposition or slag. This study was conducted to determine if the habitat has been contaminated to the extent that the assessment populations of wild birds are exposed to toxic concentrations of metals. American robins (Turdus migratorius), northern cardinals (Cardinalis cardinalis), and waterfowl had increased Pb tissue concentrations (p < 0.05) compared with Pb tissue concentrations from reference birds, and the exposure of songbirds to Pb was comparable with that of birds observed at other sites severely contaminated with Pb. Mean activities of the Pb-sensitive enzyme delta-aminolevulinic acid dehydratase (ALAD) were decreased by >50% in red blood cells in these birds (p < 0.05). Several birds had tissue concentrations of Pb that have been associated with impaired biological functions and external signs of poisoning. Cadmium was increased in kidneys of songbirds (p < 0.05), but no proximal tubule cell necrosis associated with Cd poisoning was observed. Zinc concentrations in liver and kidney of waterfowl were significantly higher (p < 0.05) than reference values. The increased environmental concentrations of Zn associated with mining in the District accounted for the pancreatitis previously observed in five waterfowl from the District. The District is the first site at which free-flying wild birds have been found to be suffering severe effects of Zn poisoning.

Kansas, Missouri, Oklahoma↗

Effect of in ovo exposure to an organochlorine mixture extracted from double crested cormorant eggs (Phalacrocorax auritus) and PCB 126 on immune function of juvenile chickens

Organochlorine (OC) contaminants including polychlorinated biphenyls (PCBs) and p, p'-dichlorodiphenyldichloroethylene (DDE) have been associated with immune modulation in wild fish-eating birds from the Great Lakes. The objective of this study was to evaluate the immune function of juvenile chickens after in ovo exposure to PCB 126 or an environmentally relevant OC mixture extracted from eggs of double crested cormorants (Phalacrocorax auritus) from Green Bay, Lake Michigan, USA. Fertile white leghorn chicken (Gallus domesticus) eggs were injected before incubation with 0.55-1.79 ng TCDD equivalents (TEQ)/egg PCB 126 and 1.2-4.9 ng TEQs/egg of cormorant egg extract into the air cell in two separate experiments. After hatching, the immune function was tested using in vivo phytohemagglutinin (PHA) skin response in 11-day-old chicks, antibody titers to immunization with sheep red blood cells (SRBC) in 28-day-old chicks, and, at necropsy, thymus and bursal mass and cellularity. PCB 126 decreased antibody titers at all doses and decreased the thymus and bursa index but not cellularity at 1.79 ng TEQ/egg. The cormorant egg extract caused no significant alterations in immune function even though it has been demonstrated as immunotoxic in chicken embryos. However, twofold to threefold increases in total anti-SRBC titers in 28-day-old chicks exposed to 1.2 or 2.4 ng TEQ/egg of cormorant extract were similar to elevations in anti-SRBC titer observed in Caspian tern (Sterna caspia) chicks from a highly OC-contaminated site in Saginaw Bay, Lake Huron. Posthatch exposure to OC through fish consumption in addition to in ovo OC exposure might be associated with the immune modulation reported in wild birds. Chicks in this study might have begun to compensate for embryonic immunotoxicity by the ages at which we studied them. ?? 2007 Springer Science+Business Media, LLC.

Archives of Environmental Contamination and Toxico↗

Bacterial succession within an ephemeral hypereutrophic mojave desert playa lake

Ephemerally wet playas are conspicuous features of arid landscapes worldwide; however, they have not been well studied as habitats for microorganisms. We tracked the geochemistry and microbial community in Silver Lake playa, California, over one flooding/desiccation cycle following the unusually wet winter of 2004-2005. Over the course of the study, total dissolved solids increased by 10-fold and pH increased by nearly one unit. As the lake contracted and temperatures increased over the summer, a moderately dense planktonic population of 1 ?????106 cells ml-1 of culturable heterotrophs was replaced by a dense population of more than 1????????109 cells ml-1, which appears to be the highest concentration of culturable planktonic heterotrophs reported in any natural aquatic ecosystem. This correlated with a dramatic depletion of nitrate as well as changes in the microbial community, as assessed by small subunit ribosomal RNA gene sequencing of bacterial isolates and uncultivated clones. Isolates from the early-phase flooded playa were primarily Actinobacteria, Firmicutes, and Bacteroidetes, yet clone libraries were dominated by Betaproteobacteria and yet uncultivated Actinobacteria. Isolates from the late-flooded phase ecosystem were predominantly Proteobacteria, particularly alkalitolerant isolates of Rhodobaca, Porphyrobacter, Hydrogenophaga, Alishwenella, and relatives of Thauera; however, clone libraries were composed almost entirely of Synechococcus (Cyanobacteria). A sample taken after the playa surface was completely desiccated contained diverse culturable Actinobacteria typically isolated from soils. In total, 205 isolates and 166 clones represented 82 and 44 species-level groups, respectively, including a wide diversity of Proteobacteria, Bacteroidetes, Actinobacteria, Firmicutes, Gemmatimonadetes, Acidobacteria, and Cyanobacteria. ?? 2008 Springer Science+Business Media, LLC.

Microbial Ecology↗

Modeling the potential spread of the non-native regal demoiselle, Neopomacentrus cyanomos, in the western Atlantic

Predicting the potential distribution of a non-native species can assist management efforts to mitigate impacts on recipient ecosystems. However, such predictions are lacking for marine species, such as the non-native regal demoiselle, Neopomacentrus cyanomos , that is currently expanding its distribution in the western Atlantic. We used correlative species distribution models with three common algorithms to predict suitable habitat for N. cyanomos in the region. We compared models developed using native, non-native, and global occurrences to differentiate drivers across separate ranges using a suite of 12 environmental characteristics. While final models included an ensemble of variables, the majority ranked the combined effect of temperature variables as a key predictor correlated with the distribution of N. cyanomos. Habitat suitability increased as water temperatures increased beyond 16 °C and where annual thermal ranges were greater than 10 °C at the shallowest depth with substrate within a study cell (~ 9.2 km 2 resolution). Habitat suitability also increased where maximum surface temperatures were greater than 27 °C. In the non-native range, the proportion of reef available in each cell was another important variable increasing the suitable habitat for N. cyanomos . Our models predicted high habitat suitability for N. cyanomos throughout the Greater Caribbean, in higher latitudes along North and South American Atlantic coasts, in the eastern Pacific Ocean, and highlights key areas where managers can monitor and target potential removal efforts. The distribution of this non-native species is likely to continue expanding throughout the region with little known about potential implications on native communities.

Coral Reefs↗

Pathology of lesions in corals from the US Virgin Islands after emergence of stony coral tissue loss disease

Stony coral tissue loss disease (SCTLD) was first documented in Florida in 2014 and has since spread through the Caribbean causing unprecedented mortality in more than 20 species of corals. The cause of SCTLD is unknown, but bacteria are suspected based on regression of gross lesions in some corals treated with antibiotics. Limited pathology studies on SCTLD exist, but it is likely that ‘SCTLD’ is a general term encompassing tissue loss disease of unexplained origin. Here, we examined pathology of lesions in corals from the US Virgin Islands where SCTLD has recently emerged. The typical histologic lesion of SCTLD in Florida corals was lytic necrosis comprising vacuolation and necrosis of mucus cells with erosion of mesoglea and misshapen endosymbionts with variably sized intracytoplasmic granules and common occurrence of filamentous viral-like particles in endosymbionts visible on electron microscopy (EM). In contrast, USVI corals had mainly lytic mucus cell hypertrophy and necrosis with no involvement of mesoglea, endosymbiont pathology at the light microscopy level was less evident, and VLP were rarely seen on EM. We suspect SCTLD is likely more complex with multiple presentations and potential etiologies depending on geographic region. Further pathological studies from other regions might help refine the case definition of SCTLD.

St. John↗

Water quality and phytoplankton communities in Lake Pontchartrain during and after the Bonnet Carre Spillway opening, April to October 2008, in Louisiana, USA

The Bonnet Carré Spillway, located 28 miles northwest of New Orleans, was constructed in the early 1930s as part of an integrated flood-control system for the lower Mississippi River system. From 11 April to 8 May 2008, Mississippi River water was diverted through the spillway into the 629-square-mile Lake Pontchartrain, which is hydraulically connected to the Gulf of Mexico. On 8 April, prior to the opening of the spillway, water-quality instruments were deployed and recorded hourly measurements of water temperature, dissolved oxygen, specific conductance, pH, and nitrate. Discrete water-quality and phytoplankton (algae) samples were collected in Lake Pontchartrain from 8 April to 3 October 2008 to assess the water-quality nutrient enrichment effects of the diversion on the lake. The maximum influence of river water in the southern portion of the lake was captured with continuous (hourly) monitoring of nitrate concentrations, and field measurements such as of specific conductance during the critical period in late April to early May. By late May, the deployed instruments had recorded the arrival, peak, and decline of selected constituents associated with the freshwater influx from the Mississippi River/Bonnet Carré Spillway diversion. The continuous monitoring data showed the short-term interactions of high-nitrate, low-specific conductance river water and low-nitrate, high-specific conductance lake water. The phytoplankton community composition, as an indicator of water quality, illustrated an extended response from the river water evident even after the continuous and discrete samples indicated that the lake had returned to pre-diversion conditions. The initial phytoplankton community response to nutrient increases was related to accumulations of diatoms. During periods of low nutrient concentrations, accumulations of blue-greens occurred by July and August. As blue-green algae cell densities and biovolumes increased in the summer, so did the species richness of blue-green algae, particularly the harmful algae bloom taxa. Cell densities and biovolume of the phytoplankton lake indicator taxa Skeletonema costatum , Anabaena sp., and Cylindrospermopsis raciborskii were highest and dominated the diatom and blue-green algae communities during the period of most river water influence on the lake and immediately following the freshwater inflows. The dominance and recession of these indictor taxa reflect the dramatic changes that occurred in the phytoplankton community in response to an increase in nutrient-rich freshwater from the diversion into the lake, and not normal seasonal phytoplankton compositional differences. Water-quality data indicated a gradual reversion to pre-diversion lake conditions by June to July, but shifts in the phytoplankton composition were still evident through August 2008. Observations from this study were similar to results from previous studies of Mississippi River/Bonnet Carré Spillway diversion opening in 1997.

Louisiana↗

Nitrogen fixation in biological soil crusts from southeast Utah, USA

Biological soil crusts can be the dominant source of N for arid land ecosystems. We measured potential N fixation rates biweekly for 2 years, using three types of soil crusts: (1) crusts whose directly counted cells were >98% Microcoleus vaginatus (light crusts); (2) crusts dominated by M. vaginatus , but with 20% or more of the directly counted cells represented by Nostoc commune and Scytonema myochrous (dark crusts); and (3) the soil lichen Collema sp. At all observation times, Collema had higher nitrogenase activity (NA) than dark crusts, which had higher NA than light crusts, indicating that species composition is critical when estimating N inputs. In addition, all three types of crusts generally responded in a similar fashion to climate conditions. Without precipitation within a week of collection, no NA was recorded, regardless of other conditions being favorable. Low (<1°C) and high (>26°C) temperatures precluded NA, even if soils were moist. If rain or snow melt had occurred 3 or less days before collection, NA levels were highly correlated with daily average temperatures of the previous 3 days ( r 2 =0.93 for Collema crusts; r 2 =0.86 for dark crusts and r 2 =0.83 for light crusts) for temperatures between 1°C and 26°C. If a precipitation event followed a long dry period, NA levels were lower than if collection followed a time when soils were wet for extended periods (e.g., winter). Using a combination of data from a recording weather datalogger, time-domain reflectometry, manual dry-down curves, and N fixation rates at different temperatures, annual N input from the different crust types was estimated. Annual N input from dark crusts found at relatively undisturbed sites was estimated at 9 kg ha –1 year –1 . With 20% cover of the N-fixing soil lichen Collema , inputs are estimated at 13 kg ha –1 year –1 . N input from light crusts, generally indicating soil surface disturbance, was estimated at 1.4 kg ha –1 year –1 . The rates in light crusts are expected to be highly variable, as disturbance history will determine cyanobacterial biomass and therefore N fixation rates.

Biology and Fertility of Soils↗

Comparison of COSPEC and two miniature ultraviolet spectrometer systems for SO 2 measurements using scattered sunlight

The correlation spectrometer (COSPEC), the principal tool for remote measurements of volcanic SO 2 , is rapidly being replaced by low-cost, miniature, ultraviolet (UV) spectrometers. We compared two of these new systems with a COSPEC by measuring SO 2 column amounts at Kīlauea Volcano, Hawaii. The two systems, one calibrated using in-situ SO 2 cells, and the other using a calibrated laboratory reference spectrum, employ similar spectrometer hardware, but different foreoptics and spectral retrieval algorithms. Accuracy, signal-to-noise, retrieval parameters, and precision were investigated for the two configurations of new miniature spectrometer. Measurements included traverses beneath the plumes from the summit and east rift zone of Kīlauea, and testing with calibration cells of known SO 2 concentration. The results obtained from the different methods were consistent with each other, with <8% difference in estimated SO 2 column amounts up to 800 ppm m. A further comparison between the COSPEC and one of the miniature spectrometer configurations, the &lsquo;FLYSPEC&rsquo;, spans an eight month period and showed agreement of measured emission rates to within 10% for SO 2 column amounts up to 1,600 ppm m. The topic of measuring high SO 2 burdens accurately is addressed for the Kīlauea measurements. In comparing the foreoptics, retrieval methods, and resultant implications for data quality, we aim to consolidate the various experiences to date, and improve the application and development of miniature spectrometer systems.`

Bulletin of Volcanology↗

Mineralogical, chemical, and crystallographic properties of supergene jarosite-group minerals from the Xitieshan Pb-Zn sulfide deposit, northern Tibetan Plateau, China

Supergene jarosite-group minerals are widespread in weathering profiles overlying Pb-Zn sulfide ores at Xitieshan, northern Tibetan Plateau, China. They consist predominantly of K-deficient natrojarosite, with lesser amounts of K-rich natrojarosite and plumbojarosite. Electron microprobe (EMP) analyses, scanning electron microcopy (SEM) investigation, and X-ray mapping reveal that the jarosite-group minerals are characterized by spectacular oscillatory zoning composed of alternating growth bands of K-deficient and K-bearing natrojarosite (K 2 O >1 wt.%). Plumbojarosite, whenever present, occurs as an overgrowth in the outermost bands, and its composition can be best represented by K 0.29 Na 0.19 Pb 0.31 Fe 2.66 Al 0.22 (SO 4 ) 1.65 (PO 4 ) 0.31 (AsO 4 ) 0.04 (OH) 7.37 . The substitution of monovalent for divalent cations at the A site of plumbojarosite is charge balanced by the substitution of five-valent for six-valent anions in XO, 4/sub> at the X site. Thermogravimetric analysis (TGA) of representative samples reveal mass losses of 11.46 wt.% at 446.6 &deg;C and 21.42 wt.% at 683.4 &deg;C due to dehydroxylation and desulfidation, respectively. TGA data also indicate that the natrojarosite structure collapses at 446.6 &deg;C, resulting in the formation of NaFe(SO 4 ) 2 and minor hematite. The decomposition products of NaFe(SO 4 ) are hematite and Na, 2 SO 4 . Powder X-ray diffraction (XRD) analyses show that the jarosite-group minerals have mean unit-cell parameters of a =7.315 &auml; and c =016.598 &auml;. XRD and EMP data support the view that substitutions of Na for K in the A site and full Fe occupancy in the B site can considerably decrease the unit-cell parameter c , but only slightly increase a . The results from this study suggest that the observed oscillatory zoning of jarosite-group minerals at Xitieshan resulted mainly from substitutions of K for Na at the A site and P for S at the X site.

Tibetan Plateau↗

Effect of tidal fluctuations on transient dispersion of simulated contaminant concentrations in coastal aquifers

Variable-density groundwater models require extensive computational resources, particularly for simulations representing short-term hydrologic variability such as tidal fluctuations. Saltwater-intrusion models usually neglect tidal fluctuations and this may introduce errors in simulated concentrations. The effects of tides on simulated concentrations in a coastal aquifer were assessed. Three analyses are reported: in the first, simulations with and without tides were compared for three different dispersivity values. Tides do not significantly affect the transfer of a hypothetical contaminant into the ocean; however, the concentration difference between tidal and non-tidal simulations could be as much as 15%. In the second analysis, the dispersivity value for the model without tides was increased in a zone near the ocean boundary. By slightly increasing dispersivity in this zone, the maximum concentration difference between the simulations with and without tides was reduced to as low as 7%. In the last analysis, an apparent dispersivity value was calculated for each model cell using the simulated velocity variations from the model with tides. Use of apparent dispersivity values in models with a constant ocean boundary seems to provide a reasonable approach for approximating tidal effects in simulations where explicit representation of tidal fluctuations is not feasible.

Hydrogeology Journal↗

Potential effects of environmental contaminants on P450 aromatase activity and DNA damage in swallows from the Rio Grande and Somerville, Texas

Cliff swallows (Petrochelidon pyrrhonota) and cave swallows (P. fulva) were sampled during the breeding season at several locations in the Rio Grande, Texas, to evaluate the potential effects of environmental contaminants on P450 aromatase activity in brain and gonads and DNA damage in blood cells. The tritiated water-release aromatase assay was used to measure aromatase activity and flow cytometry was used to measure DNA damage in nucleated blood cells. There were no significant differences in brain and gonadal aromatase activities or in estimates of DNA damage (HPCV values) among cave swallow colonies from the Lower Rio Grande Valley (LRGV) and Somerville. However, both brain and gonadal aromatase activities were significantly higher (P < 0.05) in male cliff swallows from Laredo than in those from Somerville. Also, DNA damage estimates were significantly higher (P < 0.05) in cliff swallows (males and females combined) from Laredo than in those from Somerville. Contaminants of current high use in the LRGV, such as atrazine, and some of the highly persistent organochlorines, such as toxaphene and DDE, could be potentially associated with modulation of aromatase activity in avian tissues. Previous studies have indicated possible DNA damage in cliff swallows. We did not observe any differences in aromatase activity or DNA damage in cave swallows that could be associated with contaminant exposure. Also, the differences in aromatase activity and DNA damage between male cliff swallows from Laredo and Somerville could not be explained by contaminants measured at each site in previous studies. Our study provides baseline information on brain and gonadal aromatase activity in swallows that could be useful in future studies. ?? 2008 Springer Science+Business Media, LLC.

Ecotoxicology↗