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At least 595 records · Page 33Linked to original sources
USGS2016

Developing fish trophic interaction indicators of climate change for the Great Lakes

This project addressed regional climate change effects on aquatic food webs in the Great Lakes. We sought insights by examining Lake Erie as a representative system with a high level of anthropogenic impacts, strong nutrient gradients, seasonal hypoxia, and spatial overlap of cold- and cool-water fish guilds. In Lake Erie and in large embayments throughout the Great Lakes basin, this situation is a concern for fishery managers, as climate change may exacerbate hypoxia and reduce habitat volume for some species. We examined fish community composition, fine-scale distribution, prey availability, diets, and biochemical tracers for dominant fishes from study areas with medium-high nutrient levels (mesotrophic, Fairport study area), and low nutrient levels (oligotrophic, Erie study area). This multi-year database (2011-2013) provides the ability to contrast years with wide variation in rainfall, winter ice-cover, and thermal stratification. In addition, multiple indicators of dietary and distributional responses to environmental variability will allow resource managers to select the most informative approach for addressing specific climate change questions. Our results support the incorporation of some relatively simple and cost-efficient approaches into existing agency monitoring programs to track the near-term condition status of fish and fish community composition by functional groupings. Other metrics appear better suited for understanding longer-term changes, and may take more resources to implement on an ongoing basis. Although we hypothesized that dietary overlap and similarity in selected species would be sharply different during thermal stratification and hypoxic episodes, we found little evidence of this. Instead, to our surprise, this study found that fish tended to aggregate at the edges of hypoxia, highlighting potential spatial changes in catch efficiency of the fishery. This work has had several positive impacts on a wide range of resource management and stakeholder activities, most notably in Lake Erie. The results were instrumental in the development of an interim decision rule for dealing with data collected during hypoxic events to improve stock assessment of Yellow Perch. In addition, novel findings from this study regarding spatial and temporal variability in hypoxia have aided US-Environmental Protection Agency in the development of a modified sampling protocol to more accurately quantify the central basin hypoxic zone, and this directly addressed a goal of the Great Lakes Water Quality Agreement of 2012 to reduce the extent and severity of hypoxia. Finally, the study areas developed in this project formed the basis for food web sampling in the 2014 bi-national Coordinated Science and Monitoring Initiative work in Lake Erie.

Report↗
USGS2026

Fish body midline segmentation using binary search

Body and caudal fin locomotion is ubiquitous in aquatic vertebrates, and kinematic models describing it are used in robotics, biomechanics and fisheries research. This paper presents a new algorithm to translate continuous body midlines of fish into a series of interconnected segments by identifying favorable joint positions along the body. The algorithm employs binary search to generate parsimonious kinematic models, aiming at minimizing the number of segments yet keeping approximation error below a user-defined threshold. To achieve this, the algorithm maximizes the length of each segment by determining the most distal joint position through repetitive shrinking of the search space. Theoretical and empirical analysis using two different datasets show that the binary search algorithm is substantially faster when compared to segment growing algorithm, which employs linear search to generate its models. There is four-fold improvement in computation time when generating models with less than 10 segments, which are typically sufficient to describe fish and fish-inspired robot movements. Furthermore, the multi-segment models generated by the binary search algorithm matched the ground truth models obtained through dynamic programming in over 97% of cases, and on average, contained one fewer segment than those produced by the Ramer–Douglas–Peucker algorithm, which is widely used in curvature simplification tasks. Our findings suggest that the binary search algorithm provides a computationally efficient approach for generating compact kinematic models and may facilitate the analysis of large datasets with high temporal and spatial resolution.

Computers and Electronics in Agriculture↗
USGS2026

Poor population recovery of Lake Washington Chinook Salmon (Oncorhynchus tshawytscha) in Pacific Northwestern USA may be associated with disease caused by Ceratonova shasta in an urban-influenced watershed

Understanding the effects of anthropogenic changes on fish disease is vital for supporting mitigative actions for fisheries population recovery. The Lake Washington watershed in the Pacific Northwestern United States is influenced by high urban development and climate change, compromising the sustainability of anadromous salmon. We investigated Ceratonova shasta , a myxozoan parasite, in Chinook Salmon Oncorhynchus tshawytscha to determine the impacts of C. shasta -induced enteronecrosis during salmon freshwater migrations within this watershed. All sampled adult Chinook Salmon returning to an enhancement hatchery to spawn were infected with genotype I C. shasta with a high prevalence of severe enteritis and enteronecrosis. Parasite loads and associated pathology were more severe in adult fish succumbing to prespawn mortality than in fish that spawned. Natural prespawn mortality of Chinook Salmon in the Cedar River was also associated with high C. shasta loads. Sentinel exposure studies with Chinook Salmon juveniles in the spring and fall demonstrated high levels of C. shasta genotype II actinospores in the Lake Washington Ship Canal, a human engineered canal that salmon must traverse in their freshwater migrations from the Puget Sound. The sentinel juvenile Chinook Salmon succumbed to clinical disease and high mortality from genotype II C. shasta , suggesting that these stocks have high susceptibility to this genotype. The results show that both genotypes I and II pose disease risks to adult and juvenile stages of Chinook Salmon in the watershed, and that the Lake Washington Ship Canal could be a C. shasta ‘hot spot’ for genotype II that may increase disease risk for juveniles during smolt emigration.

Washington↗
USGS2021

A global dataset of inland fisheries expert knowledge

Inland fisheries and their freshwater habitats face intensifying effects from multiple natural and anthropogenic pressures. Fish harvest and biodiversity data remain largely disparate and severely deficient in many areas, which makes assessing and managing inland fisheries difficult. Expert knowledge is increasingly used to improve and inform biological or vulnerability assessments, especially in data-poor areas. Integrating expert knowledge on the distribution, intensity, and relative influence of human activities can guide natural resource management strategies and institutional resource allocation and prioritization. This paper introduces a dataset summarizing the expert-perceived state of inland fisheries at the basin (fishery) level. An electronic survey distributed to professional networks (June-September 2020) captured expert perceptions (n = 536) of threats, successes, and adaptive capacity to fisheries across 93 hydrological basins, 79 countries, and all major freshwater habitat types. This dataset can be used to address research questions with conservation relevance, including: demographic influences on perceptions of threat, adaptive capacities for climate change, external factors driving multi-stressor interactions, and geospatial threat assessments.

Scientific Data↗
USGS1983

Survey of stocking policies for tailwater trout fisheries in the southern United States

A survey of the 16 southern states showed that 48 tailwaters in 13 states were stocked with trout in 1980. Of the almost 3.7 million trout released in these waters, 81% were of catchable size and 19% were fingerlings (< 150mm). Tailwaters received 32% of all trout stocked in the South; nearly 95% of the tailwater fish were rainbow trout ( Salmo gairdneri ). A trend away from "put-grow-and-take" fisheries toward "put-and-take" fisheries was noted. Limited creel data confirmed that fishing pressure in southern tailwaters was heavy, and that 25 to 90% of the trout stocked were recovered by anglers

Progressive Fish-Culturist↗
USGS2011

Trophic relations of introduced flathead catfish in an atlantic river

The flathead catfish Pylodictis olivaris is a large piscivore that is native to the Mississippi and Rio Grande river drainages but that has been widely introduced across the United States. River ecologists and fisheries managers are concerned about introduced flathead catfish populations because of the negative impacts on native fish communities or imperiled species associated with direct predation and indirect competition from this apex predator. We studied the trophic relations of introduced flathead catfish in an Atlantic river to further understand the effects on native fish communities. Crayfish (Astacidea) occurred most frequently in the flathead catfish diet, while sunfish Lepomis spp. comprised the greatest percentage by weight. Neither of two sympatric imperiled fish species (the federally endangered Cape Fear shiner Notropis mekistocholas and the Carolina redhorse Moxostoma sp., a federal species of concern) was found in any diet sample. An ontogenetic shift in diet was evident when flathead catfish reached about 300 mm, and length significantly explained the variation in the percent composition by weight of sunfish and darters Etheostoma and Percina spp. Flathead catfish showed positive prey selectivity for taxa that occupied similar benthic microhabitat, highlighting the importance of opportunistic feeding and prey encounter rates. Flathead catfish displayed a highly variable diel feeding chronology during July, when they had a mean stomach fullness of 0.32%, but then showed a single midday feeding peak during August (mean fullness = 0.52%). The gastric evacuation rate increased between July (0.40/h) and August (0.59/h), as did daily ration, which more than doubled between the 2 months (3.06% versus 7.37%). Our findings increase the understanding of introduced flathead catfish trophic relations and the degree of vulnerability among prey taxa, which resource managers may consider in fisheries management and conservation of native fish populations and imperiled species.

Transactions of the American Fisheries Society↗
USGS2010

Emerging viral diseases of fish and shrimp

The rise of aquaculture has been one of the most profound changes in global food production of the past 100 years. Driven by population growth, rising demand for seafood and a levelling of production from capture fisheries, the practice of farming aquatic animals has expanded rapidly to become a major global industry. Aquaculture is now integral to the economies of many countries. It has provided employment and been a major driver of socio-economic development in poor rural and coastal communities, particularly in Asia, and has relieved pressure on the sustainability of the natural harvest from our rivers, lakes and oceans. However, the rapid growth of aquaculture has also been the source of anthropogenic change on a massive scale. Aquatic animals have been displaced from their natural environment, cultured in high density, exposed to environmental stress, provided artificial or unnatural feeds, and a prolific global trade has developed in both live aquatic animals and their products. At the same time, over-exploitation of fisheries and anthropogenic stress on aquatic ecosystems has placed pressure on wild fish populations. Not surprisingly, the consequence has been the emergence and spread of an increasing array of new diseases. This review examines the rise and characteristics of aquaculture, the major viral pathogens of fish and shrimp and their impacts, and the particular characteristics of disease emergence in an aquatic, rather than terrestrial, context. It also considers the potential for future disease emergence in aquatic animals as aquaculture continues to expand and faces the challenges presented by climate change.

Veterinary Research↗
USGS2003

Mobile fishing gear reduces benthic megafaunal production on Georges Bank

This study addresses the effect of mobile fishing gear disturbance on benthic megafaunal production on the gravel pavement of northern Georges Bank. From 1994 to 2000, we sampled benthic megafauna with a 1 m Naturalists' dredge at shallow (47 to 62 m) and deep (80 to 90 m) sites. The cessation of fishing in large areas of Georges Bank in January 1995 allowed us to monitor changes in production at a previously disturbed site. Production at a shallow disturbed site varied little over the sampling period (32 to 57 kcal m-2 yr-1) and was markedly lower than production at the nearby recovering site, where production increased from 17 kcal m-2yr -1 in 1994 before the closure to 215 kcal m-2 yr -1 in 2000. Atlantic sea scallops Placopecten magellanicus and green sea urchins Strongylocentrotus droebachiensis dominated production at the recovering site. The community production:biomass ratio decreased over time at the recovering site as the sea scallop population matured. At the deep sites, production remained significantly higher at undisturbed sites (174 to 256 kcal m-2 yr-1) than at disturbed sites (30 to 52 kcal m -2 yr-1). The soft-bodied tube-building polychaete Thelepus cincinnatus dominated production at the undisturbed site, while hard-shelled bivalve molluscs Astarte spp. and P. magellanicus were prevalent at the disturbed site. Mobile fishing gear disturbance has a conspicuous effect on benthic megafaunal production in this hard-bottom habitat. Cessation of mobile fishing has resulted in a marked increase in benthic megafaunal production. These findings should help fishery managers to gauge the costs and benefits of management tools such as area closures and low-impact fishing gears.

Georges Banks↗
USGS2007

The occurrence of the colonial ascidian Didemnum sp. on Georges Bank gravel habitat: ecological observations and potential effects on groundfish and scallop fisheries

The colonial ascidian Didemnum sp. is present on the Georges Bank fishing grounds in a gravel habitat where the benthic invertebrate fauna has been monitored annually since 1994. The species was not noted before 2002 when large colonies were first observed; and by 2003 and 2004 it covered large areas of the seabed at some locations. The latest survey in 2005 documented the tunicate's presence in two gravel areas that total more than 67 nm 2 (230 km 2 ). The affected area is located on the Northern Edge of the bank in United States waters near the U.S./Canada boundary ( Fig. 1). This is the first documented offshore occurrence of a species that has colonized eastern U.S. coastal waters from New York to Maine during the past 15–20 years ( U.S. Geological Survey, 2006). Video imagery shows colonies coalescing to form large mats that cover more than 50% of the seabed along some video/photo transects. The affected area is an immobile pebble and cobble pavement that lies at water depths of 40 to 65 m where strong semidiurnal tidal currents reach speeds of 1 to 2 kt (50–100 cm/s). The water column is mixed year round, ensuring a constant supply of nutrients to the seabed. Annual temperatures range from 4 to 15 °C ( Mountain and Holzwarth, 1989). The gravel areas are bounded by sand ridges whose mobile surfaces are moved daily by the strong tidal currents. Studies commenced here in 1994 to characterize the gravel habitat and to document the effects of fishing disturbance on it ( Collie et al., 2005).

Massachusetts↗
USGS2013

Standardized methods for Grand Canyon fisheries research 2015

This document presents protocols and guidelines to persons sampling fishes in the Grand Canyon, to help ensure consistency in fish handling, fish tagging, and data collection among different projects and organizations. Most such research and monitoring projects are conducted under the general umbrella of the Glen Canyon Dam Adaptive Management Program and include studies by the U.S. Geological Survey (USGS), U.S. Fish and Wildlife Service (FWS), National Park Service (NPS), the Arizona Game and Fish Department (AGFD), various universities, and private contractors. This document is intended to provide guidance to fieldworkers regarding protocols that may vary from year to year depending on specific projects and objectives. We also provide herein documentation of standard methods used in the Grand Canyon that can be cited in scientific publications, as well as a summary of changes in protocols since the document was first created in 2002.

Grand Canyon↗
USGS1999

Effects of historical land-cover changes on flooding and sedimentation, North Fish Creek, Wisconsin

North Fish Creek, a Wisconsin tributary to Lake Superior, is an important recreational fishery that is potentially limited by the loss of aquatic habitat caused by accelerated flooding and sedimentation. A study of the historical flooding and sedimentation characteristics of North Fish Creek was done to determine how North Fish Creek responded to human-caused changes in land cover since European settlement of the region in the 1870's. Geomorphic field evidence combined with hydrologic and sediment-transport modeling indicate that historical clear-cut logging, followed by agricultural activity, significantly altered the hydrologic and geomorphic conditions of North Fish Creek. The geomorphic responses to land-cover changes were especially sensitive to the location of the reaches along the main stem and on the timing of large floods. On the basis of geomorphic evidence in flood-plain deposits and abandoned channels, the size of floods and sediment loads also increased in North Fish Creek after conversion of forested land to cropland and pasture. Changes in channel characteristics were particularly noticeable after record floods in 1941 and 1946. The upper main stem channel bed eroded downward at least 3 meters and the channel capacity at least doubled after European settlement. In the lower stem, the post-settlement sedimentation rate on the flood plain and in the channel is 4 to 6 times pre-settlement rates. The water table also appears to be rising near the mouth of North Fish Creek, perhaps consistent with (1) elevated local streambed elevations caused by sedimentation and (2) a slow relative rise in the local level of Lake Superior due to crustal rebound from glaciation. Along a transitional reach of the main stem between the upper and lower main stem, there is evidence of accelerated flood-plain sedimentation initially following European settlement. Since at least the 1940's, however, the channel bed in the transitional reach has eroded about 1 meter and the channel capacity has at least doubled. Results from hydrologic and sediment-transport modeling indicate that modern flood peaks and sediment loads in North Fish Creek may be double that expected under pre-settlement forest cover. During maximum agricultural activity in the mid-1920's to mid-1930's, flood peaks probably were about 3 times larger and sediment loads were about 5 times larger than expected under pre-settlement forest cover. These results indicate that future changes from pasture or cropland to forest will help reduce flood peaks, thereby reducing erosion and sedimentation. The addition of detention basins (to decrease flood peaks) on tributaries to North Fish Creek, or bank and instream restoration (to decrease erosion) in the upper main stem, also may help reduce the contribution of sediment from the upper main stem to the transitional section and lower main stem of the creek.

Wisconsin↗
USGS2020

COVID-19 pandemic impacts on global inland fisheries

The COVID-19 pandemic has led to environmental recovery in some ecosystems from a global “anthropause,” yet such evidence for natural resources with extraction or production value (e.g., fisheries) is limited. This brief report provides a data-driven global snapshot of expert-perceived impacts of COVID-19 on inland fisheries. We distributed an online survey assessing perceptions of inland fishery pressures in June and July 2020 to basin-level inland fishery experts (i.e., identified by the Food and Agriculture Organization of the United Nations across the global North and South); 437 respondents from 79 countries addressed 93 unique hydrological basins, accounting for 82.1% of global inland fish catch. Based on the responses analyzed against extrinsic fish catch and human development index data, pandemic impacts on inland fisheries 1) add gradation to the largely positive environmental narrative of the global pandemic and 2) identify that basins of higher provisioning value are perceived to experience greater fishery pressures but may have limited compensatory capacity to mitigate COVID-19 impacts along with negative pressures already present.

PNAS↗
USGS1964

Age, growth, sex ratio, and maturity of the whitefish in central Green Bay and adjacent waters of Lake Michigan

This study is based on 1,023 whitefish, Coregonus clupeaformis (Mitchill)--819 in seven samples from five localitites in central Green Bay in 1948-49 and 1851-52 and 204 in a single 1948 collection from northwestern Lake Michigan proper. Records of age indicated unusual strength for only one year class--1943 which strongly dominated the 1948 sample from Lake Michigan and the 1949 sample from Green Bay and was well represented in the 1948 collection from green Bay. Collection of 1951-52 without exception were dominated by age group III. Length distributions of samples varied widely according to the age composition. Among fish more than 2 years old, the length distributions of age groups overlapped broadly. Several 1-inch intervals included fish of four age groups. The length-weight relation varied considerably among central Green Bay samples, but differences among localitites were nearly equalled by the year-to-year difference at a single locality. Lake Michigan whitefish were generally lighter than those from Green Bay. Weight increased to the 3.386 power of length in Green Bay (combined samples) and the 3.359 power in Lake Michigan. Growth in length, calculated by direct proportion from diameter measurements of growth fields on scales, differed among localities in central Green Bay and between samples of different years at a single locality. If permanent locality differences exist they are not large and can be obscured by the evident annual fluctuations of growth. The grand average calculated length of Green Bay whitefish (combined collections) exceeded that of Lake Michigan fish in all years of life. The advantage was greatest (2.2 inches) at 3 years (calculated lengths of 16.0 inches and 13.8 inches) and subsequently declined to 0.5 inch at 9 years (lengths of 24.6 and 24.1 inches). Both groups reached the minimum legal length of 17 inches during the fourth growing season. Green Bay whitefish also had the larger calculated weights. The advantage reached 9.3 ounces in 3 years (calculated weights of 22.4 and 13.1 ounces). In years of life 4-9, the weight advantage over Lake Michigan fish ranged from 8.7 ounces, (seventh year; weights of 74.4 and 65.7 ounces) to 12.2 ounces (ninth year; weights of 96.2 and 84.0 ounces). Comparison of growth of whitefish at four localities in northern Lake Michigan indicates that fastest growth is in central Green Bay and slowest near the Fox Islands. Growth is intermediate and similar in northwestern Lake Michigan proper and sorthern Green Bay. Youngest mature male whitefish in green Bay belonged to age group II and youngest mature females to age group III. All IV-group fish were mature. Shortest mature males were at 14.5-14.9 inches and shortest mature females at 16.5-16.9 inches. All males longer than 17.9 inches and all females longer than 18.4 inches were mature.

Fishery Bulletin of the U.S. Fish and Wildlife Ser↗