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At least 595 records · Page 33Linked to original sources
USGS2005

Development of a comprehensive watershed model applied to study stream yield under drought conditions

We developed a model code to simulate a watershed's hydrology and the hydraulic response of an interconnected stream-aquifer system, and applied the model code to the Lower Republican River Basin in Kansas. The model code links two well-known computer programs: MODFLOW (modular 3-D flow model), which simulates ground water flow and stream-aquifer interaction; and SWAT (soil water assessment tool), a soil water budget simulator for an agricultural watershed. SWAT represents a basin as a collection of subbasins in terms of soil, land use, and weather data, and simulates each subbasin on a daily basis to determine runoff, percolation, evaporation, irrigation, pond seepage, and crop growth. Because SWAT applies a lumped hydrologic model to each sub-basin, spatial heterogeneities with respect to factors such as soil type and land use are not resolved geographically, but can instead be represented statistically. For the Republican River Basin model, each combination of six soil types and three land uses, referred to as a hydrologic response unit (HRU), was simulated with a separate execution of SWAT. A spatially weighted average was then taken over these results for each hydrologic flux and time step by a separate program, SWBAVG. We wrote a package for MODFLOW to associate each subbasin with a subset of aquifer grid cells and stream reaches, and to distribute the hydrologic fluxes given for each subbasin by SWAT and SWBAVG over MODFLOW's stream-aquifer grid to represent tributary flow, surface and ground water diversions, ground water recharge, and evapotranspiration from ground water. The Lower Republican River Basin model was calibrated with respect to measured ground water levels, streamflow, and reported irrigation water use. The model was used to examine the relative contributions of stream yield components and the impact on stream yield and base flow of administrative measures to restrict irrigation water use during droughts. Model results indicate that tributary flow is the dominant component of stream yield and that reduction of irrigation water use produces a corresponding increase in base flow and stream yield. However, the increase in stream yield resulting from reduced water use does not appear to be of sufficient magnitude to restore minimum desirable streamflows.

Groundwater↗
USGS2018

Microclimatic gradients provide evidence for a glacial refugium for temperate trees in a sheltered hilly landscape of Northern Italy

Aim Refugia play a key role in conserving biodiversity during periods of unfavourable and highly variable regional climate. However, refugial populations are often small and fragmented, which makes their identification difficult. In this study, we investigate whether an area of complex topography in the southern foreland of the Alps could have provided a suitable microclimate to serve as a glacial refugium for temperate trees during the last glacial. Location The Euganean Hills in Northern Italy (Veneto). Methods We assessed the current microclimatic variability in the ecologically diverse region on a fine scale by recording half‐hourly near‐surface temperatures over a period of 11 months. After comparing our measurements with today's vegetation distribution, broad‐scale synoptic patterns, and topoclimatic factors, we estimated refugial suitability based on extreme temperatures, climatic stability, and difference from the regional average. Results Present‐day temperature gradients within the Euganean Hills are large enough to explain the presence of the temperate tree species Fagus sylvatica as well as Mediterranean Quercus ilex , two species that are absent elsewhere in the adjacent Po Plain. During winter, anticyclonic weather patterns resulted in strong atmospheric inversions, with temperatures increasing by +1°C/100 m in the hills relative to the surrounding Po Plain. Main conclusions Our high‐resolution climate data support multi‐proxy palaeoecological records identifying the Euganean Hills as a refugium for temperate trees. Temperature anomalies of 2–4°C relative to the surrounding Po Plain are sufficient to allow several temperate tree species to survive the Last Glacial Maximum (LGM) in the Euganean Hills under a harsh continental climate. Specifically, elevations >200 m a.s.l. in the central parts of the hills may have provided suitable conditions for local LGM refugia. Regions of complex topography such as the Euganean Hills conserved past and present biodiversity and provide high‐priority areas for conservation under future climate warming.

Journal of Biogeography↗
USGS2026

Special issue “The 2024 M7.6 Noto Peninsula earthquake and seismic swarm”

The 2024 Mw7.5 (M JMA 7.6) Noto Peninsula earthquake struck the Noto Peninsula, central Japan on January 1, 2024, causing widespread damage. This Mw7.5 mainshock, together with the prolonged seismic swarm that persisted in the northeastern Noto Peninsula since the end of 2020, of which the largest event was the 2023 M JMA 6.5 earthquake, constitutes one of the most significant seismic sequences in Japan in recent decades. The sequence provides a rare opportunity to investigate the complex interplay among swarm activity, fluid migration, fault geometry and distribution, and the preparatory conditions required for a large inland crustal earthquake. Motivated by this scientific context, this special issue brings together studies examining the sequence from diverse disciplinary perspectives, incorporating seismic, geodetic, and tsunami-related observations and modelling.

Noto Peninsula↗
USGS1997

Classification and Mapping of Agricultural Land for National Water-Quality Assessment

Agricultural land use is one of the most important influences on water quality at national and regional scales. Although there is great diversity in the character of agricultural land, variations follow regional patterns that are influenced by environmental setting and economics. These regional patterns can be characterized by the distribution of crops. A new approach to classifying and mapping agricultural land use for national water-quality assessment was developed by combining information on general land-use distribution with information on crop patterns from agricultural census data. Separate classification systems were developed for row crops and for orchards, vineyards, and nurseries. These two general categories of agricultural land are distinguished from each other in the land-use classification system used in the U.S. Geological Survey national Land Use and Land Cover database. Classification of cropland was based on the areal extent of crops harvested. The acreage of each crop in each county was divided by total row-crop area or total orchard, vineyard, and nursery area, as appropriate, thus normalizing the crop data and making the classification independent of total cropland area. The classification system was developed using simple percentage criteria to define combinations of 1 to 3 crops that account for 50 percent or more or harvested acreage in a county. The classification system consists of 21 level I categories and 46 level II subcategories for row crops, and 26 level I categories and 19 level II subcategories for orchards, vineyards, and nurseries. All counties in the United States with reported harvested acreage are classified in these categories. The distribution of agricultural land within each county, however, must be evaluated on the basis of general land-use data. This can be done at the national scale using 'Major Land Uses of the United States,' at the regional scale using data from the national Land Use and Land Cover database, or at smaller scales using locally available data.

Circular↗
USGS2009

The National Map - Elevation

The National Elevation Dataset (NED) is the primary elevation data product produced and distributed by the USGS. The NED provides seamless raster elevation data of the conterminous United States, Alaska, Hawaii, and the island territories. The NED is derived from diverse source data sets that are processed to a specification with a consistent resolution, coordinate system, elevation units, and horizontal and vertical datums. The NED is the logical result of the maturation of the long-standing USGS elevation program, which for many years concentrated on production of topographic map quadrangle-based digital elevation models. The NED serves as the elevation layer of The National Map, and provides basic elevation information for earth science studies and mapping applications in the United States. The NED is a multi-resolution dataset that is updated bimonthly to integrate newly available, improved elevation source data. NED data are available nationally at grid spacings of 1 arc-second (approximately 30 meters) for the conterminous United States, and at 1/3 and 1/9 arc-seconds (approximately 10 and 3 meters, respectively) for parts of the United States. Most of the NED for Alaska is available at 2-arc-second (about 60 meters) grid spacing, where only lower resolution source data exist. Part of Alaska is available at the 1/3-arc-second resolution, and plans are in development for a significant upgrade in elevation data coverage of the State over the next 5 years. Specifications for the NED include the following: *Coordinate system: Geographic (decimal degrees of latitude and longitude), *Horizontal datum: North American Datum of 1983 (NAD 83), *Vertical datum: North American Vertical Datum of 1988 (NAVD 88) over the conterminous United States and varies in other areas, and *Elevation units: Decimal meters.

Fact Sheet↗
USGS2022

Opportunities to improve alignment with the FAIR Principles for U.S. Geological Survey data

In 2016, an interdisciplinary, international group of 53 scientists introduced a framework named “the FAIR Principles” for addressing 21st century scientific data challenges. The FAIR Principles are increasingly used as a guide for producing digital scientific products that are findable, accessible, interoperable, and reusable (FAIR), especially to enable use of such products in automated systems. Data aligned with the FAIR Principles can increase the efficiency of science integration capabilities such as those envisioned for the U.S. Geological Survey (USGS) Earth Monitoring, Analyses, and Projections (EarthMAP) initiative. The FAIR Principles clearly define the characteristics of reusable scientific products, but it is less clear how to facilitate consistency in achieving these characteristics across the Bureau. USGS data are produced by local research projects distributed over more than 100 centers in 7 regions. After data are approved for release, they could be managed in numerous repositories and online data systems. The diversity of USGS data is illustrated by the topical range of the USGS mission areas: Core Science Systems, Ecosystems, Energy and Minerals, Natural Hazards, and Water Resources. In the USGS context, realizing the EarthMAP vision for automated, predictive, integrated science that provides timely and actionable results involves providing knowledge and support services and developing the skills, infrastructure, and culture to enable Bureau-wide implementation of the FAIR Principles. In 2019, the USGS Community for Data Integration funded a project to convene a broadly representative workshop and produce recommendations to enable consistency with the FAIR Principles across the USGS. The workshop, held in Fort Collins, Colorado, in September 2019, brought together 28 participants for 3 days to engage with the FAIR Principles, analyze USGS use cases, and discuss the roles of data producers and managers, data storage and catalogs, value-added services, and policy makers in implementing the FAIR Principles. Workshop participants agreed that scientific reproducibility requires the extension of the FAIR Principles beyond measured data to include physical samples, research methods, software, and tools at the USGS. Workshop discussions focused on how the USGS can implement the FAIR Principles by supporting research teams in creating data, metadata, and other scientific products and also by supporting enterprise systems that maintain and leverage the products’ consistency with the FAIR Principles. The resulting FAIR roadmap of recommendations describes nine proposed interdependent strategies that could be achieved by coordinated actions taken by different parts of the USGS. A proposed early action would be the creation of a coordinating council that includes representatives from the groups engaged in activities consistent with better alignment with the FAIR Principles. The nine proposed strategies, which are presented in more detail in this roadmap report, focus on enabling improvements to individual data products, providing infrastructure, and structuring administrative activities to support an organizational culture that values the FAIR Principles.

Open-File Report↗
USGS1998

Sponges of the Permian Upper Capitan Limestone Guadalupe Mountains, New Mexico and Texas

Demosponge "sphinctozoans" and inozoid calcareous sponges are major constituents of the Upper Permian, Upper Capitan Limestone in the Guadalupe Mountains of New Mexico and Texas. Systematic description, taxonomy, and the stratigraphic distribution of these sponges are documented in collections from exposures of the Upper Capitan Limestone in the vicinity of Carlsbad Caverns in New Mexico. The fauna appears diverse on a local scale, but when compared to diversity of assemblages of similar age in Tunisia and in Southern China, the assemblage is species poor, with 34 species of "calcareous" sponges and demosponges. Whether this is a local time or geographic gradient must wait additional investigations of sponge faunas from older parts of the Guadalupian series in the Guadalupe Mountains, as well as in localities southward in Texas and Mexico. Upper Capitan exposures near Carlsbad Caverns are at the northernmost end of the long Delaware Basin that was restricted by the Hovey channel to the south. As a consequence of either that restricted ecologic limitation or a time stratigraphic factor, Late Capitan assemblages are characterized by abundant individuals of only a few endemic species, and by relatively primitive cosmopolitan genera and species that were able to persist beyond the ranges of more specialized forms. Species in the collections include the ceractinomorphid porate "sphinctozoans" Cystothalamia guadalupensis (Girty, 1908a), Amblysiphonella cf. A. merlai Parona, 1933, Amblysiphonella species A, Amblysiphonella species B, Discosiphonella mammilosa (King, 1943), Tristratocoelia rhythmica Senowbari-Daryan and Rigby, 1988, Exaulipora permica (Senowbari-Daryan, 1990), type species of the new genus Exaulipora, Parauvanella minima Senowbari-Daryan, 1990, and Platythalamiella(?) sp., all from the families Sebargasiidae Steinmann, 1882, and Colospongiidae Senowbari-Daryan, 1990. The family Solenolmiidae Engeser, 1986 is represented by the new species Preverticillites parva. Among the ceractinomorphid Aporata, the family Thaumastocoeliidae Ott, 1967 is represented by Sollasia ostiolata Steinmann, 1882, and Girtyocoelia beedei (Girty, 1908b). The sclerospongiid Guadalupiidae Termier and Termier, in Termier, et al., 1977a, which includes the family Guadalupiidae Girty, 1908a, is represented by the species Guadalupia zitteliana Girty, 1908a, and Guadalupia explanata (King, 1943), Lemonea cylindrica (Girty, 1908a), Lemonea conica Senowbari-Daryan, 1990, Lemonea polysiphonata Senowbari-Daryan, 1990, and the new species Lemonea exaulifera and Lemonea micra. The Calcarea are represented within the subclass Aspiculata Rigby and Senowbari-Daryan, 1996a, and order Inozoida Rigby and Senowbari-Daryan, 1996a, by the Auriculospongiidae Termier and Termier, 1977a, which includes the large Gigantospongia discoforma Rigby and Senowbari-Daryan, 1996b. and Cavusonella caverna Rigby, Fan, and Zhang, 1989b. Also included are the Peronidellidae Wu, 1991, represented by the species Peronidella cf. P. rigbyi Senowbari-Daryan, 1991, Peronidella(?) delicata new species, and Minispongia constricta (Girty, 1908a), and the new genus and species Bicoelia guadalupensis. The family Virgulidae Termier and Termier, 1977a, is redefined to include the genus Virgola and the species Virgola neptunia (Girty, 1908a), and Virgola rigida (Girty, 1908a,). The family Polysiphonellidae Wu, 1991, (not Polysiphonellidae Belyaeva in Boiko, et al., 1991) is interpreted to include most of the subfamilies originally included by Rigby and Senowbari-Daryan (1996a) in the Virgulispongiidae. The sponge Grossotubinella parallela Rigby, Fan, and Zhang, 1989b is included there in the Preeudinae, with Pseudovirgula tenuis Girty, 1908a. Heliospongid demosponges are represented in the Upper Capitan by Heliospongia ramosa Girty, 1908b, Heliospongia vokesi King, 1943, and Neoheliospongia(?) cf. N. typica Deng, 1981. Fossils of unknown taxonomy, possibly sponges, hydrozoans or algae, are incl

Brigham Young University Geology Studies↗
USGS2022

Using a multi-model ensemble approach to determine biodiversity hotspots with limited occurrence data in understudied areas: An example using freshwater mussels in México

Species distribution models (SDMs) are an increasingly important tool for conservation particularly for difficult-to-study locations and with understudied fauna. Our aims were to (1) use SDMs and ensemble SDMs to predict the distribution of freshwater mussels in the Pánuco River Basin in Central México; (2) determine habitat factors shaping freshwater mussel occurrence; and (3) use predicted occupancy across a range of taxa to identify freshwater mussel biodiversity hotspots to guide conservation and management. In the Pánuco River Basin, we modeled the distributions of 11 freshwater mussel species using an ensemble approach, wherein multiple SDM methodologies were combined to create a single ensemble map of predicted occupancy. A total of 621 species-specific observations at 87 sites were used to create species-specific ensembles. These predictive species ensembles were then combined to create local diversity hotspot maps. Precipitation during the warmest quarter, elevation, and mean temperature were consistently the most important discriminatory environmental variables among species, whereas land use had limited influence across all taxa. To the best of our knowledge, our study is the first freshwater mussel-focused research to use an ensemble approach to determine species distribution and predict biodiversity hotspots. Our study can be used to guide not only current conservation efforts but also prioritize areas for future conservation and study.

Pánuco↗
USGS2010

Grassland birds wintering at U.S. Navy facilities in southern Texas

Grassland birds have undergone widespread decline throughout North America during the past several decades. Causes of this decline include habitat loss and fragmentation because of conversion of grasslands to cropland, afforestation in the East, brush and shrub invasion in the Southwest and western United States, and planting of exotic grass species to enhance forage production. A large number of exotic plant species, including grasses, have been introduced in North America, but most research on the effects of these invasions on birds has been limited to breeding birds, primarily those in northern latitudes. Research on the effects of exotic grasses on birds in winter has been extremely limited. This is the first study in southern Texas to examine and compare winter bird responses to native and exotic grasslands. This study was conducted during a period of six years (2003–2009) on United States Navy facilities in southern Texas including Naval Air Station–Corpus Christi, Naval Air Station–Kingsville, Naval Auxiliary Landing Field Waldron, Naval Auxiliary Landing Field Orange Grove, and Escondido Ranch, all of which contained examples of native grasslands, exotic grasslands, or both. Data from native and exotic grasslands were collected and compared for bird abundance and diversity; ground cover, vegetation density, and floristic diversity; bird and vegetation relationships; diversity of insects and arachnids; and seed abundance and diversity. Effects of management treatments in exotic grasslands were evaluated by comparing numbers and diversity of birds and small mammals in mowed, burned, and control areas. To determine bird abundance and bird species richness, birds were surveyed monthly (December–February) during the winters of 2003–2008 in transects (100 meter × 20 meter) located in native and exotic grasslands distributed at all five U.S. Navy facilities. To compare vegetation in native and exotic grasslands, vegetation characteristics were measured during 2003–2008 in the same transects used for bird surveys and included five measures of ground cover, plus estimates of plant species richness, vegetation density (visual obstruction) at two different heights, and shrub numbers. These data, plus seasonal rainfall, were then used to evaluate components of variation in native and exotic grasslands. Relations between total bird numbers and bird species richness with environmental variation in native and exotic grasslands were compared. To compare diversity of arthropods in native and exotic grasslands, insects and arachnids were collected using three different methodologies (standardized sweep-net, random sweep-net, and pitfall traps) during four seasons, (2005–2006), at Naval Air Station–Corpus Christi, Naval Auxiliary Landing Field Waldron, and Naval Air Station–Kingsville. To compare seed abundance and diversity between native and exotic grasslands, seeds were collected for two winters (2004–2006) at Naval Air Station–Corpus Christi and Naval Air Station–Kingsville. To evaluate effects of management on grassland vertebrates, abundance and diversity of birds and small mammals were estimated and compared in exotic grasses subjected to mowing, burning, or no active management (control) for one full year (2008–2009). Observations were made of 1,044 birds of 30 species in grassland transects during five winters. The Savannah Sparrow ( Passerculus sandwichensis ) was the most common bird, which, with 644 detections, accounted for 63 percent of all individuals identified to species. Meadowlarks ( Sturnella spp. ) and Le Conte’s Sparrows ( Ammodramus leconteii ) were the second (10 percent) and third (7 percent) most abundant bird species, respectively. Six of the seven most abundant species detected in grasslands were grassland species, and their numbers accounted for 87 percent of all birds, but 20 of the 30 species (67 percent) that used grasslands were not grassland species. Seven species observed in grassland transects during the study were Species of Conservation Concern: Le Conte’s Sparrow, Sedge Wren ( Cistothorus platensis ), Grasshopper Sparrow ( Ammodramus savannarum ), Long-billed Curlew ( Numenius americanus ), Sprague’s Pipit ( Anthus spragueii ), Cassin’s Sparrow ( Aimophila cassinii ), and Loggerhead Shrike ( Lanius ludovicianus ). Native grasslands consistently supported greater bird species richness than exotic grasslands. In one winter, exotic grasslands supported more birds than native grasslands. Native grasslands were determined to have more forb cover, more bare ground, and greater plant species richness than exotic grasslands, whereas exotic grasslands were characterized by more grass cover and relatively greater vegetation density during dry years. Not only did these individual measures differ between native and exotic grasslands, but components of variation also differed. In native grasslands, grass density and cover contributed more to variation, whereas in exotic grasslands, non-grass vegetation was a greater component of variation. Total bird numbers and bird species richness in native grasslands were related to the principal component that contained a measure of litter cover. Total bird numbers and bird species richness in exotic grasslands indicated no significant relationships with any of the principal components of variation. The two most common insect orders in native grasslands were Hymenoptera and Coleoptera, which accounted for 42 percent of all insects. The two most common insect orders in exotic grasslands were Hemiptera and Homoptera, which accounted for about 80 percent of all insects. Insect family richness was greater in exotic grasslands than in native grasslands in two of four seasons. Proportions of arachnid families were similar in native and exotic grasslands, but arachnid family richness was greater in exotic grasslands than in native grasslands. Abundance of seeds was greater in exotic than in native grasslands. However, seed diversity was greater in native grasslands than in exotic grasslands. Among the three types of management (mowed, burned, and control) applied to exotic grasses, birds were most abundant in the mowed area. Sedge Wrens, however, were never encountered in mowed sites. Meadowlarks were similarly abundant in all treatments, but Le Conte’s Sparrows were detected only in the control (unmanaged) area. Hispid cotton rats ( Sigmodon hispidus ) accounted for 93 percent of all rodent captures, with the number of captures peaking December through February. Hispid cotton rat numbers and total rodent numbers were greatest in control and pre-burn areas, and lowest in the mowed area. Mammal diversity, however, was greatest in the mowed habitat. Native and exotic grasslands differed essentially in all categories (bird numbers and diversity, vegetation characteristics, components of variation, diversity of insects and arachnids, and seed abundance and diversity) used to measure and compare them. This indicates that fundamental ecosystem processes have been altered after native grasslands have undergone invasion and ultimate domination by exotic grass species. Future research in Texas grassland ecosystems is essential because: 1) Texas sustains more area in grasslands than any other state or province in the Central Flyway; 2) Texas serves as the winter destination or migration pathway for hundreds of species of birds, including winter residents and Neotropical migrants; 3) ecology, distribution, and numbers of grassland birds wintering in southern latitudes of the United States remains poorly understood; and 4) climate change threatens to further accelerate advances of invading grass species.

Open-File Report↗
USGS2016

Sediment load and distribution in the lower Skagit River, Skagit County, Washington

The Skagit River delivers about 40 percent of all fluvial sediment that enters Puget Sound, influencing flood hazards in the Skagit lowlands, critically important estuarine habitat in the delta, and some of the most diverse and productive agriculture in western Washington. A total of 175 measurements of suspended-sediment load, made routinely from 1974 to 1993, and sporadically from 2006 to 2009, were used to develop and evaluate regression models of sediment transport (also known as “sediment-rating curves”) for estimating suspended-sediment load as a function of river discharge. Using a flow-range model and 75 years of daily discharge record (acquired from 1941 to 2015), the mean annual suspended-sediment load for the Skagit River near Mount Vernon, Washington, was estimated to be 2.5 teragrams (Tg, where 1 Tg = 1 million metric tons). The seasonal model indicates that 74 percent of the total annual suspended‑sediment load is delivered to Puget Sound during the winter storm season (from October through March), but also indicates that discharge is a poor surrogate for suspended‑sediment concentration (SSC) during the summer low-flow season. Sediment-rating curves developed for different time periods revealed that the regression model slope of the SSC-discharge relation increased 66 percent between the periods of 1974–76 and 2006–09 when suspended-sediment samples were collected, implying that changes in sediment supply, channel hydraulics, and (or) basin hydrology occurred between the two time intervals. In the relatively wet water year 2007 (October 1, 2006, through September 30, 2007), an automated sampler was used to collect daily samples of suspended sediment from which an annual load of 4.5 Tg was calculated, dominated by a single large flood event that contributed 1.8 Tg, or 40 percent of the total. In comparison, the annual load calculated for water year 2007 using the preferred flow-range model was 4.8 Tg (+6.7 percent), in close agreement with the measured value. Particle size affects sediment transport, fate and distribution across watersheds, and therefore is important for predicting how coastal environments, particularly deltas and beaches, will respond to changes in climate and sea-level. Particle-size analysis of winter storm samples indicated that about one-half of the suspended-sediment load consisted of fines (that is, silt- and clay-sized particles smaller than 0.0625 mm in diameter), and the remainder consisted of mostly fine- to medium-sized sand (0.0625–0.5 mm), whereas bedload during winter storm flows (about 1–3 percent of total sediment load) was predominantly composed of medium to coarse sand (0.25–1 mm). A continuous turbidity record from the Anacortes Water Treatment Plant (water years 1999–2013), used as a surrogate for the concentration of fines ( R 2 = 0.93, p = 4.2E-10, n = 17), confirms that about one-half of the mean annual suspended-sediment load is composed of fines. The distribution of flow through the delta distributaries (that is, the channels into which the main stem splits as it approaches the delta) is dynamic, with twice as much flow through the North Fork of the Skagit River relative to the South Fork during low-flow conditions, and close to equal flows in the two channels during high-flow conditions. Turbidity, monitored at several locations in the lower river in spring 2009, was essentially uniform among sites, indicating that fines are well mixed in the lower Skagit River system (defined as the Skagit River and all its distributaries downstream of the Mount Vernon streamgage). A strong relation ( R 2 = 0.95, p = 3.2E-14, n = 21; linear regression) between the concentration of fines and turbidity measured at various locations in summer 2009 indicates that turbidity is an effective surrogate for the concentration of fines, independent of location in the river, under naturally well-mixed fluvial conditions. This relation is especially useful for monitoring suspended sediment in western Washington rivers that are seasonally dominated by glacier meltwater because glacial melting typically produces suspended-sediment concentrations that are not well correlated with discharge. These results provide a comprehensive set of tools to estimate sediment delivery and delta responses of interest to scientists and resource managers including decision-makers examining options for flood hazard mitigation, estuary restoration, and climate change adaptation.

Washington↗
USGS2022

Prioritizing habitats based on abundance and distribution of molting waterfowl in the Teshekpuk Lake Special Area of the National Petroleum Reserve, Alaska

The National Petroleum Reserve in Alaska (NPR-A) encompasses more than 9.5 million hectares of federally managed land on the Arctic Coastal Plain of northern Alaska, where it supports a diversity of wildlife, including millions of migratory birds. Within the NPR-A, Teshekpuk Lake and the surrounding area provide important habitat for migratory birds and this area has been designated by the Bureau of Land Management as the Teshekpuk Lake Special Area (TLSA) because numerous waterfowl species use the area for breeding and molting. Our goal was to provide a mechanism for land managers to assess relative value of areas for molting waterfowl. This approach was based on the population densities of Pacific black brant ( Branta bernicla nigricans ) and cackling geese ( Branta hutchinsii ) and pre-defined thresholds for the minimum fraction of the population contained within selected areas. Prioritizations were based on long-term records of population density combined with global-positioning system data to reveal small-scale patterns of habitat use. The highest population density of the Pacific black brant was found along the Beaufort Sea coast on the eastern edge of the study area, whereas cackling geese were somewhat more widely distributed. Depending on the criteria used for prioritization and width of protective buffers placed around selected units, 52–85% of the Goose Molting Area was identified as high-priority area. The effectiveness of this approach to protection of molting birds assumes that buffers around high value units are wide enough to provide adequate protection from disturbance related to oil and gas development.

Alaska↗
USGS2016

Shifting patterns in SAV species diversity and community structure

This chapter examines the shifting patterns in Chesapeake SAV community structure and the potential environmental variables that explain variation in species composition patterns at both long and short time periods. Bay-wide species occurrence data sets are summarized. These data show that twenty-seven or more species of SAV are found within the tidal Chesapeake Bay. Seventeen of these are common, and four of those are non-native. The distributions of these SAV species are largely controlled by salinity, resulting in species associations along salinity gradients. There is higher species richness in low salinity SAV communities compared to medium and high salinity areas, but some of the species have wide salinity tolerances and are found in more than one community type. Most low salinity SAV species have expanded their distributions within the Bay, whereas the distributions of medium and high salinity species have either not changed or decreased. Two non-native species ( Hydrilla verticillata , Najas minor ) have increased their distributions, while the distributions of two nonnative species ( Myriophyllum spicatum , Potomogeton crispus) have not been observed to spread. Factors other than salinity that affect SAV community structure include water quality conditions, water movement, sediment quality, temperature, disease, water fowl herbivory, competitive interactions, propagule availability and shading from the invasive floating aquatic vegetation, Trapa natans . Historic declines in SAV abundances and diversity have largely been linked to anthropogenic impacts, although disease and storms have also contributed to episodic alterations to SAV communities.

Chesapeake Bay↗
USGS1994

Water-resources activities of the U.S. Geological Survey in New Mexico, fiscal year 1992

Awareness of our environment in general, and water resources in particular, has brought increased interest in and support of hydrologic data collection and research. The quantity, quality, and distribution of water are extremely important to the future well-being of New Mexico. The State's surface-water resources are minimal and highly variable due to climate and to regulation and diversion; ground-water resources are subject to development that exceeds natural recharge and to potential contamination by land use. Issues related to global climate change, disposal of hazardous wastes, toxic substances in water, water rights, and ground-water contamination are evolving areas of greater public concern. At the same time there is a continuing need for a better understanding of various hydrologic systems and processes in order to manage these limited water resources for maximum benefit to present and future generations. The U.S. Geological Survey has collected and disseminated information on the water resources of New Mexico for more than a century. The Survey began to collect records of streamflow in New Mexico in December 1888 when the first discharge measurements were made on the Rio Grande near the present gaging station at Embudo. This site, called the "birthplace of systematic stream gaging," was chosen to be the training center for the first hydrographers of the Irrigation Survey, a bureau within the original Geological Survey. Since that time, in cooperation with Federal, State, local, and tribal agencies, we have monitored streams at hundreds of sites throughout the State and have a current network of more than 200 streamflow-gaging stations. Through the Cooperative Program, we also have established sites where ground-water levels are monitored to document changes in ground-water storage or where surface-water and groundwater samples are collected to determine water chemistry, and we have undertaken investigative studies to define the availability, quality, and distribution of water resources. Information from the data program and results of investigative studies are made available to water-resources managers, regulators, and the public to be used for the effective management of the State's water resources. This report provides a brief summary of the activities of the New Mexico District for FY (fiscal year) 1992, including our mission, organization, sources of funding, and descriptions of current projects. This report serves to document not only the content of the program, but also the diversity and complexity of that program. Cooperation among water-resources agencies will be essential in effectively dealing with water-related issues facing New Mexico. We look forward to the challenge of addressing these issues by continuing to provide factual hydrologic data and technically sound areal appraisals and interpretive studies.

New Mexico↗
USGS1996

Seafloor environments in Cape Cod Bay, a large coastal embayment

Cape Cod Bay is a glacial, semi-enclosed embayment that has a patchy distribution of modern seafloor sedimentary environments of erosion or nondeposition, deposition, and sediment reworking. Sidescan-sonar records and supplemental bathymetric, sedimentary, subbottom, and physical-oceanographic data indicate that the characteristics and distribution of these three categories of bottom environments are controlled by a combination of geologic and oceanographic processes that range from episodic to long-term and from regional to local. (1) Environments of erosion or nondeposition comprise exposures of bedrock, glacial drift, and coarse lag deposits that contain sediments (where present) ranging from boulder fields to gravelly coarse-to-medium sands. These environments are dominant on the shallow margins of the bay (water depths < 30 m) where they reflect sediment resuspension, winnowing, and transport during modern northerly storms. (2) Environments of deposition are blanketed by fine-grained sediments ranging from muds to muddy fine sands. These environments are dominant across the floor of the central basin (water depths = 30–60 m) where fine-grained sediments (derived from regional and local sources and emplaced primarily during episodic wind- and density-driven flow) settle through the water column and accumulate under weak bottom currents during nonstorm conditions. (3) Environments of sediment reworking contain patches with diverse textures ranging from gravelly sands to muds. These environments occupy much of the transitional slopes between the margins and the basin floor and reflect a combination of erosion and deposition. The patchy distribution of sedimentary environments within the bay reflects not only regional changes in processes between the margins and the basin but local changes within each part of the bay as well. Small-scale patchiness is caused by local changes in the strengths of wave- and wind-driven currents and (on the margins) by local variations in the supply of fine-grained sediments. This study indicates areas within Cape Cod Bay where fine-grained sediments and associated contaminants are likely to be either moved or deposited. It also provides a guide to the locations and variability of benthic habitats.

Cape Cod Bay↗
USGS2011

User's manual for the National Water-Quality Assessment Program Invertebrate Data Analysis System (IDAS) software, version 5

The Invertebrate Data Analysis System (IDAS) software was developed to provide an accurate, consistent, and efficient mechanism for analyzing invertebrate data collected as part of the U.S. Geological Survey National Water-Quality Assessment (NAWQA) Program. The IDAS software is a stand-alone program for personal computers that run Microsoft Windows(Registered). It allows users to read data downloaded from the NAWQA Program Biological Transactional Database (Bio-TDB) or to import data from other sources either as Microsoft Excel(Registered) or Microsoft Access(Registered) files. The program consists of five modules: Edit Data, Data Preparation, Calculate Community Metrics, Calculate Diversities and Similarities, and Data Export. The Edit Data module allows the user to subset data on the basis of taxonomy or sample type, extract a random subsample of data, combine or delete data, summarize distributions, resolve ambiguous taxa (see glossary) and conditional/provisional taxa, import non-NAWQA data, and maintain and create files of invertebrate attributes that are used in the calculation of invertebrate metrics. The Data Preparation module allows the user to select the type(s) of sample(s) to process, calculate densities, delete taxa on the basis of laboratory processing notes, delete pupae or terrestrial adults, combine lifestages or keep them separate, select a lowest taxonomic level for analysis, delete rare taxa on the basis of the number of sites where a taxon occurs and (or) the abundance of a taxon in a sample, and resolve taxonomic ambiguities by one of four methods. The Calculate Community Metrics module allows the user to calculate 184 community metrics, including metrics based on organism tolerances, functional feeding groups, and behavior. The Calculate Diversities and Similarities module allows the user to calculate nine diversity and eight similarity indices. The Data Export module allows the user to export data to other software packages (CANOCO, Primer, PC-ORD, MVSP) and produce tables of community data that can be imported into spreadsheet, database, graphics, statistics, and word-processing programs. The IDAS program facilitates the documentation of analyses by keeping a log of the data that are processed, the files that are generated, and the program settings used to process the data. Though the IDAS program was developed to process NAWQA Program invertebrate data downloaded from Bio-TDB, the Edit Data module includes tools that can be used to convert non-NAWQA data into Bio-TDB format. Consequently, the data manipulation, analysis, and export procedures provided by the IDAS program can be used to process data generated outside of the NAWQA Program.

Techniques and Methods↗
USGS2023

Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration

In the face of accelerating climate change, advancing understanding of how extreme climatic events influence estuarine salinities can help to inform resource management. Extreme salinities driven by droughts, hurricanes, floods, and freshwater flow alterations can lead to ecological transformations in estuarine ecosystems. Here, we applied the Coastal Salinity Index (CSI; Conrads and Darby 2017) to 22 years (1998–2020) of salinity data in a Louisiana estuary (Barataria Estuary, USA) to elucidate the impacts of extreme events on estuarine salinities. The CSI is an index to quantify salinity patterns at a specific location through long-term averages and deviations from historical average conditions. We calculated and compared CSI values for four stations distributed along an estuarine salinity gradient. We identified 10 events between 1998 and 2020 that produced extreme salinities, including two droughts, four hurricanes, three floods, and one freshwater diversion. The droughts of 2000 and 2006 caused surface water salinities to increase substantially throughout the estuary. The effects of hurricanes were highly variable, with some storms leading to elevated salinities throughout the entire estuary (e.g., Hurricanes Katrina and Rita in 2005), whereas other storms led to elevated salinities for some but not all stations (e.g., Hurricanes Gustav and Ike in 2008 or Hurricane Isaac in 2012). The opening of a freshwater river diversion in 2010 contributed to fresher conditions throughout the estuary and appeared to reduce or eliminate the increases in salinity that normally occur during the summer, although these effects were short-lived. Mississippi River floods in 2008, 2011, and 2019 reduced salinities throughout the estuary, but the effects were most pronounced in the lower estuary compared to the upper estuary. Collectively, our results advance understanding of the influence of extreme events on estuarine salinity regimes. Our analyses also highlight the value of the CSI for identifying periods with extreme salinities (i.e., extreme high or low salinities) via calculations that place salinity levels within and across estuaries within a historical context.

Louisiana↗
USGS2013

Thermal controls of Yellowstone cutthroat trout and invasive fishes under climate change

We combine large observed data sets and dynamically downscaled climate data to explore historic and future (2050–2069) stream temperature changes over the topographically diverse Greater Yellowstone Ecosystem (elevation range = 824–4017 m). We link future stream temperatures with fish growth models to investigate how changing thermal regimes could influence the future distribution and persistence of native Yellowstone cutthroat trout (YCT) and competing invasive species. We find that stream temperatures during the recent decade (2000–2009) surpass the anomalously warm period of the 1930s. Climate simulations indicate air temperatures will warm by 1 °C to >3 °C over the Greater Yellowstone by mid-21st century, resulting in concomitant increases in 2050–2069 peak stream temperatures and protracted periods of warming from May to September (MJJAS). Projected changes in thermal regimes during the MJJAS growing season modify the trajectories of daily growth rates at all elevations with pronounced growth during early and late summer. For high-elevation populations, we find considerable increases in fish body mass attributable both to warming of cold-water temperatures and to extended growing seasons. During peak July to August warming, mid-21st century temperatures will cause periods of increased thermal stress, rendering some low-elevation streams less suitable for YCT. The majority (80%) of sites currently inhabited by YCT, however, display minimal loss (<10%) or positive changes in total body mass by midcentury; we attribute this response to the fact that many low-elevation populations of YCT have already been extirpated by historical changes in land use and invasions of non-native species. Our results further suggest that benefits to YCT populations due to warmer stream temperatures at currently cold sites could be offset by the interspecific effects of corresponding growth of sympatric, non-native species, underscoring the importance of developing climate adaptation strategies that reduce limiting factors such as non-native species and habitat degradation.

Global Change Biology↗
USGS2005

Rainfall-Runoff and Water-Balance Models for Management of the Fena Valley Reservoir, Guam

The U.S. Geological Survey's Precipitation-Runoff Modeling System (PRMS) and a generalized water-balance model were calibrated and verified for use in estimating future availability of water in the Fena Valley Reservoir in response to various combinations of water withdrawal rates and rainfall conditions. Application of PRMS provides a physically based method for estimating runoff from the Fena Valley Watershed during the annual dry season, which extends from January through May. Runoff estimates from the PRMS are used as input to the water-balance model to estimate change in water levels and storage in the reservoir. A previously published model was calibrated for the Maulap and Imong River watersheds using rainfall data collected outside of the watershed. That model was applied to the Almagosa River watershed by transferring calibrated parameters and coefficients because information on daily diversions at the Almagosa Springs upstream of the gaging station was not available at the time. Runoff from the ungaged land area was not modeled. For this study, the availability of Almagosa Springs diversion data allowed the calibration of PRMS for the Almagosa River watershed. Rainfall data collected at the Almagosa rain gage since 1992 also provided better estimates of rainfall distribution in the watershed. In addition, the discontinuation of pan-evaporation data collection in 1998 required a change in the evapotranspiration estimation method used in the PRMS model. These reasons prompted the update of the PRMS for the Fena Valley Watershed. Simulated runoff volume from the PRMS compared reasonably with measured values for gaging stations on Maulap, Almagosa, and Imong Rivers, tributaries to the Fena Valley Reservoir. On the basis of monthly runoff simulation for the dry seasons included in the entire simulation period (1992-2001), the total volume of runoff can be predicted within -3.66 percent at Maulap River, within 5.37 percent at Almagosa River, and within 10.74 percent at Imong River. Month-end reservoir volumes simulated by the reservoir water-balance model for both calibration and verification periods compared closely with measured reservoir volumes. Errors for the calibration periods ranged from 4.51 percent [208.7 acre-feet (acre-ft) or 68.0 million gallons (Mgal)] to -5.90 percent (-317.8 acre-ft or -103.6 Mgal). For the verification periods, errors ranged from 1.69 percent (103.5 acre-ft or 33.7 Mgal) to -4.60 percent (-178.7 acre-ft or -58.2 Mgal). Monthly simulation bias ranged from -0.19 percent for the calibration period to -0.98 percent for the verification period; relative error ranged from -0.37 to -1.12 percent, respectively. Relatively small bias indicated that the model did not consistently overestimate or underestimate reservoir volume.

Scientific Investigations Report↗