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At least 577 records · Page 32Linked to original sources

USGS2013

Laramide basin CSI: Comprehensive stratigraphic investigations of Paleogene sediments in the Colorado Headwaters Basin, north-central Colorado

The Paleogene sedimentary deposits of the Colorado Headwaters Basin provide a detailed proxy record of regional deformation and basin subsidence during the Laramide orogeny in north-central Colorado and southern Wyoming. This field trip presents extensive evidence from sedimentology, stratigraphy, structure, palynology, and isotope geochronology that shows a complex history that is markedly different from other Laramide synorogenic basins in the vicinity. We show that the basin area was deformed by faulting and folding before, during, and after deposition of the Paleogene rocks. Internal unconformities have been identified that further reflect the interaction of deformation, subsidence, and sedimentation. Uplift of Proterozoic basement blocks that make up the surrounding mountain ranges today occurred late in basin history. Evidence is given to reinterpret the Independence Mountain uplift as the result of significant normal faulting (not thrusting), probably in middle Tertiary time. While the Denver and Cheyenne Basins to the east were subsiding and accumulating sediment during Late Cretaceous time, the Colorado Headwaters Basin region was experiencing vertical uplift and erosion. At least 1200 m of the upper part of the marine Upper Cretaceous Pierre Shale was regionally removed, along with Fox Hills Sandstone shoreline deposits of the receding Interior Seaway as well as any Laramie Formation–type continental deposits. Subsidence did not begin in the Colorado Headwaters Basin until after 60.5 Ma, when coarse, chaotic, debris-flow deposits of the Paleocene Windy Gap Volcanic Member of the Middle Park Formation began to accumulate along the southern basin margin. These volcaniclastic conglomerate deposits were derived from local, mafic-alkalic volcanic sources (and transitory deposits in the drainage basin), and were rapidly transported into a deep lake system by sediment gravity currents. The southern part of the basin subsided rapidly (roughly 750–1000 m/m.y.) and the drainage system delivered increasing proportions of arkosic debris from uplifted Proterozoic basement and more intermediate-composition volcanic-porphyry materials from central Colorado sources. Other margins of the Colorado Headwaters Basin subsided at slightly different times. Subsidence was preceded by variable amounts of gentle tilting and localized block-fault uplifts. The north-central part of the basin that was least-eroded in early Paleocene time was structurally inverted and became the locus of greatest subsidence during later Paleocene-Eocene time. Middle Paleocene coal-mires formed in the topographically lowest eastern part of the basin, but the basin center migrated to the western side by Eocene time when coal was deposited in the Coalmont district. In between, persistent lakes of variable depths characterized the central basin area, as evidenced by well-preserved deltaic facies. Fault-fold deformation within the Colorado Headwaters Basin strongly affected the Paleocene fluvial-lacustrine deposits, as reflected in the steep limbs of anticline-syncline pairs within the McCallum fold belt and the steep margins of the Breccia Spoon syncline. Slivers of Proterozoic basement rock were also elevated on steep reverse faults in late Paleocene time along the Delaney Butte–Sheep Mountain–Boettcher Ridge structure. Eocene deposits, by and large, are only gently folded within the Colorado Headwaters Basin and thus reflect a change in deformation history. The Paleogene deposits of the Colorado Headwaters Basin today represent only a fragment of the original extent of the depositional basin. Basal, coarse conglomerate deposits that suggest proximity to an active basin margin are relatively rare and are limited to the southern and northwestern margins of the relict basin. The northeastern margin of the preserved Paleogene section is conspicuously fine-grained, which indicates that any contemporaneous marginal uplift was far removed from the current extent of preserved fluvial-lacustrine sediments. The conspicuous basement uplifts of Proterozoic rock that flank the current relict Paleogene basin deposits are largely post-middle Eocene in age and are not associated with any Laramide synuplift fluvial deposits. The east-west–trending Independence Mountain fault system that truncates the Colorado Headwaters Basin on the north with an uplifted Proterozoic basement block is reinterpreted in this report. Numerous prior analyses had concluded that the fault was a low-angle, south-directed Laramide thrust that overlapped the northern margin of the basin. We conclude instead that the fault is more likely a Neogene normal fault that truncates all prior structure and belongs to a family of sub-parallel west-northwest–trending normal faults that offset upper Oligocene-Miocene fluvial deposits of the Browns Park–North Park Formations.

Colorado↗

USGS2018

Macrobenthic infaunal communities associated with deep‐sea hydrocarbon seeps in the northern Gulf of Mexico

There are thousands of seeps in the deep ocean worldwide; however, many questions remain about their contributions to global biodiversity and the surrounding deep‐sea environment. In addition to being globally distributed, seeps provide several benefits to humans such as unique habitats, organisms with novel genes, and carbon regulation. The purpose of this study is to determine whether there are unique seep macrobenthic assemblages, by comparing seep and nonseep environments, different seep habitats, and seeps at different depths and locations. Infaunal community composition, diversity, and abundance were examined between seep and nonseep background environments and among three seep habitats (i.e., microbial mats, tubeworms, and soft‐bottom seeps). Abundances were higher at seep sites compared to background areas. Abundance and diversity also differed among microbial mat, tubeworm, and soft‐bottom seep habitats. Although seeps contained different macrobenthic assemblages than nonseep areas, infaunal communities were also generally unique for each seep. Variability was 75% greater within communities near seeps compared to communities in background areas. Thus, high variability in community structure characterized seep communities rather than specific taxa. The lack of similarity among seep sites supports the idea that there are no specific infauna that can be used as indicators of seepage throughout the northern Gulf of Mexico, at least at higher taxonomic levels.

Marine Ecology↗

USGS2020

Mitochondrial genome diversity and population mitogenomics of Polar cod (Boreogadus saida) and Arctic dwelling gadoids

High-latitude fish typically exhibit a narrow thermal tolerance window, which may pose challenges when coping with temperatures that shift outside of a species’ range of tolerance. Due to its role in aerobic metabolism and energy balance, the mitochondrial genome is likely critical for the acclimation and adaptation to differing temperature regimes in marine ectotherms. As oceans continue to warm, there is growing need to understand the ability of organisms to respond to changing environmental conditions given evidence that some species, in particular cold-water species, may already be experiencing difficulties. To assess how Arctic gadids in Alaska have responded to differential thermal preferences in the past and how regions are interconnected, we sequenced complete mitochondrial genomes for four Arctic gadids to determine the distribution of mitochondrial diversity and population-level structure as well as to detect signatures of selection acting on the mitochondrial genome. We found little population-level structure within all four species with the clear exception of Gulf of Alaska saffron cod ( Eleginus gracilis ). Northern localities exhibited higher levels of genetic diversity and primarily northern lineages were observed within polar cod ( Boreogadus saida ) and saffron cod, likely reflecting asymmetrical dispersal and potentially admixture of distinct lineages via ocean currents. The main evolutionary force shaping the evolution of the mitogenome appears to be purifying selection, but we also identified potential positive selection of candidate amino acid replacements primarily in complex I (ND genes) in polar cod. The high levels of mitochondrial diversity observed in our study and large population size may provide this species with the ability to respond evolutionarily (i.e. long-term) to a changing environment.

Alaska↗

USGS1997

Organic geochemical study of sequences overlying coal seams; example from the Mansfield Formation (Lower Pennsylvanian), Indiana

Roof successions above two coal seams from the Mansfield Formation (Lower Pennsylvanian) in the Indiana portion of the Illinois Basin have been studied with regard to sedimentary structures, organic petrology and organic geochemistry. The succession above the Blue Creek Member of the Mansfield Formation is typical of the lithologies covering low-sulphur coals (< 1%) in the area studied, whereas the succession above the unnamed Mansfield coal is typical of high-sulphur coals (>2.%). The transgressive-regressive packages above both seams reflect the periodic inundation of coastal mires by tidal flats and creeks as inferred from bioturbation and sedimentary structures such as tidal rhythmites and clay-draped ripple bedforms. Geochemistry and petrology of organic facies above the Blue Creek coal suggest that tidal flats formed inland in fresh-water environments. These overlying fresh water sediments prevented saline waters from invading the peat, contributing to low-sulphur content in the coal. Above the unnamed coal, trace fossils and geochemical and petrological characteristics of organic facies suggest more unrestricted seaward depositional environment. The absence of saline or typically marine biomarkers above this coal is interpreted as evidence of very short periods of marine transgression, as there was not enough time for establishment of the precursor organisms for marine biomarkers. However, sufficient time passed to raise SO 4 2− concentration in pore waters, resulting in the formation of authigenic pyrite and sulphur incorparation into organic matter.

International Journal of Coal Geology↗

USGS2024

Oblique contraction along the fastest ocean-continent transform plate boundary focuses rock uplift west of the Fairweather fault, southeast Alaska

Contraction along the Yakutat–North America plate boundary drives 4.6–9.0 mm/year Holocene rock uplift rates along Earth's fastest slipping (≥49 mm/year) ocean–continent transform fault, the Fairweather Fault. Between Icy Point and Lituya Bay, the near-vertical Fairweather fault focuses rock uplift and rapid right-lateral slip by accommodating both vertical and fault-parallel strain during oblique-slip and separate, predominantly strike-slip ruptures. Unusually high uplift rates, indicated by radiocarbon and luminescence dating, result from a 10-km-wide, asymmetric, positive flower structure along a 20°, ∼30-km-long restraining double bend in the Fairweather fault. The principal reverse fault in the flower structure, the offshore, blind Icy Point–Lituya Bay fault, ruptures no more than every 460–1040 years evidenced by uplifted Holocene shorelines. Maximum 3–5 m coseismic uplifts imply 3.1–10 m dip slip per event and earthquake magnitudes of M w 7.0–7.5. The Yakutat block collides obliquely into North America, and our model entails oblique slip on the Fairweather fault with and without corupture on the reverse fault. Oblique slip is evident by vertically offset (>25 m) fluvial and marine terraces and by the primary Fairweather fault strand that strikes >20° to the west of plate-boundary motion.

Alaska↗

USGS2017

Fishing activities

Unlike the major anthropogenic changes that terrestrial and coastal habitats underwent during the last centuries such as deforestation, river engineering, agricultural practices or urbanism, those occurring underwater are veiled from our eyes and have continued nearly unnoticed. Only recent advances in remote sensing and deep marine sampling technologies have revealed the extent and magnitude of the anthropogenic impacts to the seafloor. In particular, bottom trawling, a fishing technique consisting of dragging a net and fishing gear over the seafloor to capture bottom-dwelling living resources has gained attention among the scientific community, policy makers and the general public due to its destructive effects on the seabed. Trawling gear produces acute impacts on biota and the physical substratum of the seafloor by disrupting the sediment column structure, overturning boulders, resuspending sediments and imprinting deep scars on muddy bottoms. Also, the repetitive passage of trawling gear over the same areas creates long-lasting, cumulative impacts that modify the cohesiveness and texture of sediments. It can be asserted nowadays that due to its recurrence, mobility and wide geographical extent, industrial trawling has become a major force driving seafloor change and affecting not only its physical integrity on short spatial scales but also imprinting measurable modifications to the geomorphology of entire continental margins.

Book chapter↗

USGS2016

Observations of pockmark flow structure in Belfast Bay, Maine, Part 1: current-induced mixing

Field observations of current profiles and temperature, salinity, and density structure were used to examine vertical mixing within two pockmarks in Belfast Bay, Maine. The first is located in 21 m water depth (sea level to rim), nearly circular in shape with a 45 m rim diameter and 12 m rim-to-bottom relief. The second is located in 25 m water depth, more elongated in shape with an approximately 80 m (36 m) major (minor) axis length at the rim, and 17 m relief. Hourly averaged current profiles were acquired from bottom-mounted acoustic Doppler current profilers deployed on the rim and center of each pockmark over successive 42 h periods in July 2011. Conductivity–temperature–depth casts at the rim and center of each pockmark show warmer, fresher water in the upper water column, evidence of both active and fossil thermocline structure 5–8 m above the rim, and well-mixed water below the rim to the bottom. Vertical velocities show up- and down-welling events that extend into the depths of each pockmark. An observed temperature change at both the rim and center occurs coincident with an overturning event below the rim, and suggests active mixing of the water column into the depths of each pockmark. Vertical profiles of horizontal velocities show depth variation at both the center and rim consistent with turbulent logarithmic current boundary layers, and suggest that form drag may possibly be influencing the local flow regime. While resource limitations prevented observation of the current structure and water properties at a control site, the acquired data suggest that active mixing and overturning within the sampled pockmarks occur under typical benign conditions, and that current flows are influenced by upstream bathymetric irregularities induced by distant pockmarks.

Maine↗

USGS2011

Flat-plate techniques for measuring reflectance of macro-algae ( Ulva curvata )

We tested the consistency and accuracy of flat-plate spectral measurements (400–1000 nm) of the marine macrophyte Ulva curvata . With sequential addition of Ulva thallus layers, the reflectance progressively increased from 6% to 9% with six thalli in the visible (VIS) and from 5% to 19% with ten thalli in the near infrared (NIR). This progressive increase was simulated by a mathematical calculation based on an Ulva thallus diffuse reflectance weighted by a transmittance power series. Experimental and simulated reflectance differences that were particularly high in the NIR most likely resulted from residual water and layering structure unevenness in the experimental progression. High spectral overlap existed between fouled and non-fouled Ulva mats and the coexistent lagoon mud in the VIS, whereas in the NIR, spectral contrast was retained but substantially dampened by fouling.

International Journal of Remote Sensing↗

USGS1951

Preliminary report on the stratigraphy and structure of the Shaviovik and upper Sagavanirktok Rivers area, Alaska

During the 1951 field season, U. S. Geological Survey Navy Oil Unit party 1 conducted stratigraphic and structural studies of the rocks in the area between the westernmost fork of the Shaviovik River and the East Kuparuk River. This area is drained by the Sagavanirktok River and its major tributaries; the Echooka River, the Ivishak River, and Lupine River. Owing to the nature of the investigation, the studies were confined to a relatively narrow geographic strip, rarely exceeding a distance of 20 miles north of the northernmost occurrence of the Lisburne limestone of the Brooks Range province. The work was thus conducted in an area of approximately 2,000 square miles, which lies wholly within the Brooks and Arctic Foothill provinces; within this area approximately 1,000 square miles was mapped geologically. The party consisted of six men: A. S. Keller and R. L. Detterman, geologists; I. W. Marine and D. E. Reed, field assistants; L. G. Barbin, cook-field assistant; and T. F. Derrington, weasel mechanic. The party utilized 3 weasels for transportation of equipment and personnel during the season, during which time 15 camps ware established. Work was initiated on the Shaviovik River on May 24, 1951, and the party concluded its investigations on the Kuparuk River drainage on August 24, 1951. In 1947, G. Gryc and E. H. Lathram conducted reconnaissance studies of the rocks in the vicinity of camps 12-15 (pl. 1); and during the same year, G. Gryn visited outcrops on the Ivishak River in the vicinity of camps 6-7 (pl. 1). These studies were made by the Navy Oil Unit of the U. S. Geological Survey in conjunction with the investigations of NPR-4. No other work of a geologic nature had been done in the area in the past. The primary objective of the 1951 party was the correlation of the Mesozoic and upper Paleozoic strata of the foothills province west of the Itkillik River, with that of the Shaviovik and Canning Rivers region. A secondary objective was to determine the cause of the pronounced northeasterly swing in the trend of the Brooks Range front in the Sagavanirktok drainage and to determine the structural implications of this swing. The area was mapped at a scale of 1:20,000 on vertical photographs and transferred to trimetrogon drainage maps at a scale of 1:48,000 and 1:96, 00. An altimeter traverse was carried concurrently with the geologic mapping.

Alaska↗

USGS2002

Location, structure, and seismicity of the Seattle fault zone, Washington: Evidence from aeromagnetic anomalies, geologic mapping, and seismic-reflection data

A high-resolution aeromagnetic survey of the Puget Lowland shows details of the Seattle fault zone, an active but largely concealed east-trending zone of reverse faulting at the southern margin of the Seattle basin. Three elongate, east-trending magnetic anomalies are associated with north-dipping Tertiary strata exposed in the hanging wall; the magnetic anomalies indicate where these strata continue beneath glacial deposits. The northernmost anomaly, a narrow, elongate magnetic high, precisely correlates with magnetic Miocene volcanic conglomerate. The middle anomaly, a broad magnetic low, correlates with thick, nonmagnetic Eocene and Oligocene marine and fluvial strata. The southern anomaly, a broad, complex magnetic high, correlates with Eocene volcanic and sedimentary rocks. This tripartite package of anomalies is especially clear over Bainbridge Island west of Seattle and over the region east of Lake Washington. Although attenuated in the intervening region, the pattern can be correlated with the mapped strike of beds following a northwest-striking anticline beneath Seattle. The aeromagnetic and geologic data define three main strands of the Seattle fault zone identified in marine seismic-reflection profiles to be subparallel to mapped bedrock trends over a distance of >50 km. The locus of faulting coincides with a diffuse zone of shallow crustal seismicity and the region of uplift produced by the M 7 Seattle earthquake of A.D. 900-930.

Washington↗

USGS2017

Oregon OCS seafloor mapping: Selected lease blocks relevant to renewable energy

In 2014 the U.S. Geological Survey (USGS) and the Bureau of Ocean Energy Management (BOEM) entered into Intra-agency agreement M13PG00037 to map an area of the Oregon Outer Continental Shelf (OCS) off of Coos Bay, Oregon, under consideration for development of a floating wind energy farm. The BOEM requires seafloor mapping and site characterization studies in order to evaluate the impact of seafloor and sub-seafloor conditions on the installation, operation, and structural integrity of proposed renewable energy projects, as well as to assess the potential effects of construction and operations on archaeological resources. The mission of the USGS is to provide geologic, topographic, and hydrologic information that contributes to the wise management of the Nation's natural resources and that promotes the health, safety, and well being of the people. This information consists of maps, databases, and descriptions and analyses of the water, energy, and mineral resources, land surface, underlying geologic structure, and dynamic processes of the earth. For the Oregon OCS study, the USGS acquired multibeam echo sounder and seafloor video data surrounding the proposed development site, which is 95 km2 in area and 15 miles offshore from Coos Bay. The development site had been surveyed by Solmar Hydro Inc. in 2013 under a contract with WindFloat Pacific. The USGS subsequently produced a bathymetry digital elevation model and a backscatter intensity grid that were merged with existing data collected by the contractor. The merged grids were published along with visual observations of benthic geo-habitat from the video data in an associated USGS data release (Cochrane and others, 2015). This report includes the results of analysis of the video data conducted by Oregon State University and the geo-habitat interpretation of the multibeam echo sounder (MBES) data conducted by the USGS. MBES data was published in Cochrane and others (2015). Interpretive data associated with this publication is published in Cochrane (2017). All the data is provided as geographic information system (GIS) files that contain both Esri ArcGIS geotiffs or shapefiles. For those who do not own the full suite of Esri GIS and mapping software, the data can be read using Esri ArcReader, a free viewer that is available at http://www.esri.com/software/arcgis/arcreader/index.html (last accessed August 29, 2016). Web services, which consist of standard implementations of ArcGIS representational state transfer (REST) Service and Open Geospatial Consortium (OGC) GIS web map service (WMS), also are available for all published GIS data. Web services were created using an ArcGIS service definition file, resulting in data layers that are symbolized as shown on the associated report figures. Both the ArcGIS REST Service and OGC WMS Service include all the individual GIS layers. Data layers are bundled together in a map-area web service; however, each layer can be symbolized and accessed individually after the web service is ingested into a desktop application or web map. Web services enable users to download and view data, as well as to easily add data to their own workflows, using any browser-enabled, standalone or mobile device. Though the surficial substrate is dominated by combinations of mud and sand substrate, a diverse assortment of geomorphologic features are related to geologic processes—one anticlinal ridge where bedrock is exposed, a slump and associated scarps, and pockmarks. Pockmarks are seen in the form of fields of small pockmarks, a lineation of large pockmarks with methanogenic carbonates, and areas of large pockmarks that have merged into larger variously shaped depressions. The slump appears to have originated at the pockmark lineation. Video-supervised numerical analysis of the MBES backscatter intensity data and vector ruggedness derived from the MBES bathymetry data was used to produce a substrate model called a seafloor character raster for the study area. The seafloor character raster consists of three substrate classes: soft-flat areas, hard-flat areas, and hard-rugged areas. A Coastal and Marine Ecological Classification Standard (CMECS) geoform and substrate map was also produced using depth, slope, and benthic position index classes to delineate geoform boundaries. Seven geoforms were identified in this process, including ridges, slump scars, slump deposits, basins, and pockmarks. Statistical analysis of the video data for correlations between substrate, depth, and invertebrate assemblages resulted in the identification of seven biomes: three hard-bottom biomes and four softbottom biomes. A similar analysis of vertebrate observations produces a similar set of biomes. The biome between-group dissimilarity was very high or high. Invertebrates alone represent most of the structure of the whole benthic community into different assemblages. A biotope map was generated using the seafloor character raster and the substrate and depth values of the biomes. Hard substrate biotopes were small in size and were located primarily on the ridge and in pockmarks along the pockmark lineation. The soft-bottom bitopes consisted of large contiguous areas delimited by isobaths.

Open-File Report↗

USGS2009

An integrated approach to benthic habitat mapping using remote sensing and GIS: An example from the Hawaiian Islands

This chapter documents our effort to map benthic habitats within the KalokoHonokohau National Historic Park, Hawai`i, USA. We produce detailed benthichabitat maps by using a combination of color aerial photography, high-resolution bathymetry, and georeferenced underwater video and still photography. We classify individual habitat polygons using five basic attributes and additional information regarding geology, morphology, and coral species. Derivative data sets including isobaths, hillshades, and slope maps are also generated. The mapping shows that benthic habitat and seafloor morphology varies greatly throughout the study area. Nearly 73% of the study area consists of a hardbottom structure that is potentially available for coral habitation; the remaining 27% includes unconsolidated sediment and artificial or historical features. Coral cover is generally low and increases with water depth. The offshore geology is predominantly composed of smooth to undulating pahoehoe-type basalt flows that form flat to gently sloping benches, vertical walls, and steep escarpments. In some locations the basalt surface is irregular and mounded into ridges, pinnacles, and arches. Large rounded basaltic boulders and smaller scattered rocks are common throughout the marine portions of the park. Coral or accreted carbonate reef obscures the underlying volcanic surface in only a few areas. The underlying geologic framework and morphology of the submerged volcanic flows within Kaloko-Honokohau National Historical Park provide the primary control on benthic habitats within the park. The habitat maps and associated data can be used as a stand-alone product or in a GIS to provide useful baseline information to scientists, managers and the general public.

Hawaii↗

USGS2000

The North Sakhalin Neogene total petroleum system of eastern Russia

The North Sakhalin Basin Province of eastern Russia contains one Total Petroleum System (TPS) ? North Sakhalin Neogene ? with more than 6 BBOE known, ultimately recoverable petroleum (61% gas, 36% oil, 3% condensate). Tertiary rocks in the basin were deposited by the prograding paleo-Amur River system. Marine to continental, Middle to Upper Miocene shale to coaly shale source rocks charged marine to continental Middle Miocene to Pliocene sandstone reservoir rocks in Late Miocene to Pliocene time. Fractured, self-sourced, Upper Oligocene to Lower Miocene siliceous shales also produce hydrocarbons. Geologic history is that of a Mesozoic Asian passive continental margin that was transformed into an active accretionary Tertiary margin and Cenozoic fold belt by the collision of India with Eurasia and by the subduction of Pacific Ocean crustal plates under the Asian continent. The area is characterized by extensional, compressional and wrench structural features that comprise most known traps.

Open-File Report↗

USGS2008

Protocol for Monitoring Fish Assemblages in Pacific Northwest National Parks

Rivers and streams that drain from Olympic, Mount Rainier, and North Cascades National Parks are among the most protected corridors in the lower 48 States, and represent some of the largest tracts of contiguous, undisturbed habitat throughout the range of several key fish species of the Pacific Northwest. These watersheds are of high regional importance as freshwater habitat sanctuaries for native fish, where habitat conditions are characterized as having little to no disturbance from development, channelization, impervious surfaces, roads, diversions, or hydroelectric projects. Fishery resources are of high ecological and cultural importance in Pacific Northwest National Parks, and significantly contribute to economically important recreational, commercial, and tribal fisheries. This protocol describes procedures to monitor trends in fish assemblages, fish abundance, and water temperature in eight rivers and five wadeable streams in Olympic National Park during summer months, and is based on 4 years of field testing. Fish assemblages link freshwater, marine, and terrestrial ecosystems. They also serve as focal resources of national parks and are excellent indicators of ecological conditions of rivers and streams. Despite the vital importance of native anadromous and resident fish populations, there is no existing monitoring program for fish assemblages in the North Coast and Cascades Network. Specific monitoring objectives of this protocol are to determine seasonal and annual trends in: (1) fish species composition, (2) timing of migration of adult fish, (3) relative abundance, (4) age and size structure, (5) extent of non-native and hatchery fish, and (6) water temperature. To detect seasonal and annual trends in fish assemblages in reference sites, we rely on repeated and consistent annual sampling at each monitoring site. The general rationale for the repeated sampling of reference sites is to ensure that we account for the high interannual variability in fish movements and abundances in rivers. One underlying assumption is that the monitoring program is designed in perpetuity, and consequently our capability to detect trends substantially increases with time. The protocol describes sampling designs, methods, training procedures, safety considerations, data management, data analysis, and reporting. The allocation of sampling effort represents a balance between ecological considerations, a sound monitoring approach, and practical limitations caused by logistical constraints and a limited annual budget of $55,000. The widespread declines of native fish species in western North America highlights the importance and urgency of understanding trends in fish assemblages from undisturbed habitats. Seasonal and annual trends in fish assemblages will provide insights at the individual, population, and assemblage level. This protocol will allow managers to detect increases and decreases in abundance of priority management species, and occurrence of non-native, hatchery, and federally listed fish. The detection of trends in fish assemblages will allow for specific management actions that may include: implementation of more appropriate fishing regulations, evaluation of existing hatchery releases, control of non-native fish species, and prioritization of habitat restoration projects. Dissemination and communication of scientific findings on North Coast and Cascades Network fish assemblages will be a core product of this protocol, which will have much relevance to decision makers, park visitors, researchers, and educators.

Techniques and Methods↗

USGS2024

Non-mercury methylating microbial taxa are integral to understanding links between mercury methylation and elemental cycles in marine and freshwater sediments

The goal of this study was to explore the role of non-mercury (Hg) methylating taxa in mercury methylation and to identify potential links between elemental cycles and Hg methylation. Statistical approaches were utilized to investigate the microbial community and biochemical functions in relation to methylmercury (MeHg) concentrations in marine and freshwater sediments. Sediments were collected from the methylation zone (top 15 cm) in four Hg-contaminated sites. Both abiotic (e.g., sulfate, sulfide, iron, salinity, total organic matter, etc.) and biotic factors (e.g., hgcA , abundances of methylating and non-methylating taxa) were quantified. Random forest and stepwise regression were performed to assess whether non-methylating taxa were significantly associated with MeHg concentration. Co-occurrence and functional network analyses were constructed to explore associations between taxa by examining microbial community structure, composition, and biochemical functions across sites. Regression analysis showed that approximately 80% of the variability in sediment MeHg concentration was predicted by total mercury concentration, the abundances of Hg methylating taxa, and the abundances of the non-Hg methylating taxa. The co-occurrence networks identified Paludibacteraceae and Syntrophorhabdaceae as keystone non Hg methylating taxa in multiple sites, indicating the potential for syntrophic interactions with Hg methylators. Strong associations were also observed between methanogens and sulfate-reducing bacteria, which were likely symbiotic associations. The functional network results suggested that non-Hg methylating taxa play important roles in sulfur respiration, nitrogen respiration, and the carbon metabolism-related functions methylotrophy, methanotrophy, and chemoheterotrophy. Interestingly, keystone functions varied by site and did not involve carbon- and sulfur-related functions only. Our findings highlight associations between methylating and non-methylating taxa and sulfur, carbon, and nitrogen cycles in sediment methylation zones, with implications for predicting and understanding the impact of climate and land/sea use changes on Hg methylation.

Environmental Pollution↗

USGS2013

Clinoform deposition across a boundary between orogenic front and foredeep - an example from the Lower Cretaceous in Arctic Alaska

The Lower Cretaceous Fortress Mountain Formation occupies a spatial and temporal niche between syntectonic deposits at the Brooks Range orogenic front and post-tectonic strata in the Colville foreland basin. The formation includes basin-floor fan, marine-slope and fan-delta facies that define a clinoform depositional profile. Texture and composition of clasts in the formation suggest progressive burial of a tectonic wedge-front that included older turbidites and mélange. These new interpretations, based entirely on outcrop study, suggest that the Fortress Mountain Formation spans the boundary between orogenic wedge and foredeep, with proximal strata onlapping the tectonic wedge-front and distal strata downlapping the floor of the foreland basin. Our reconstruction suggests that clinoform amplitude reflects the structural relief generated by tectonic wedge development and load-induced flexural subsidence of the foreland basin.

Alaska↗

USGS1989

Search for clues to Mesozoic graben on Long Island

The position of Long Island between the Hartford Basin of Connecticut and graben structures reported from seismic reflection studies offshore to the south of the island suggests the possibility that other grabens associated with the early Mesozoic rifting might be buried beneath central Long Island. The hypothesis that post-rift tectonic activity would be related to the rift grabens and that such activity would be expressed in the post-rift sedimentary deposits led to a study of the Cretaceous and Pleistocene section to seek clues for buried grabens on Long Island. The Pleistocene glacial deposits in central and eastern Long Island have been mapped and a pollen zonation in the Upper Cretaceous section in the central part established. This work, combined with literature research, suggests the following: 1. (1) In central Long Island, the spacing of wells which reach basement enables a NE- striking zone free of basement samples to be defined where a buried graben could occur. This zone is referred to as the “permissible zone” because within it the data permit the existence of a hidden graben. 2. (2) The abrupt changes in the thickness of some pollen zones in the Upper Cretaceous deposits of central Long Island may be related to Cretaceous faulting. 3. (3) Buried preglacial valleys, the confluence of glacial lobes and major glacial outwash channels seem concentrated in west central and central Long Island. The loci of these drainage features may reflect structural control by a basement depression. 4. (4) The “permissible zone” is aligned with the zone of structures in an offshore zone south of central Long Island and with the Hartford Basin in Connecticut. Geophysical anomalies also fit into this pattern. 5. (5) A definitive answer to the question of a buried graben on Long Island will require a seismic line across the “permissible zone”, or further drilling.

Marine Geology↗

USGS1995

Estimating annual survival and movement rates of adults within a metapopulation of roseate terns

Several multistratum capture—recapture models were used to test various hypotheses about possible geographic and temporal variation in survival, movement, and recapture/resighting probabilities of 2399 adult Roseate Terns (Sterna dougallii) color—banded from 1988 to 1992 at the sites of the four largest breeding colonies of this species in the northeastern USA. Linear—logistic ultrastructural models also were developed to investigate possible correlates of geographic variation in movement probabilities. Based on goodness—of—fit tests and comparisons of Akaike's Information Criterion (AIC) values, the fully parameterized model (Model A) with time— and location—specific survival, movement, and capture probabilities, was selected as the most appropriate model for this metapopulation structure. With almost all movement accounted for, on average >90% of the surviving adults from each colony site returned to the same site the following year. Variations in movement probabilities were more closely associated with the identity of the destination colony site than with either the identity of the colony site of origin or the distance between colony sites. The average annual survival estimates (0.74—0.84) of terns from all four sites indicate a high rate of annual mortality relative to that of other species of marine birds.

Ecology↗