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At least 577 records · Page 32Linked to original sources

Lyme disease ecology in a changing world: Consensus, uncertainty and critical gaps for improving control

Lyme disease is the most common tick-borne disease in temperate regions of North America, Europe and Asia, and the number of reported cases has increased in many regions as landscapes have been altered. Although there has been extensive work on the ecology and epidemiology of this disease in both Europe and North America, substantial uncertainty exists about fundamental aspects that determine spatial and temporal variation in both disease risk and human incidence, which hamper effective and efficient prevention and control. Here we describe areas of consensus that can be built on, identify areas of uncertainty and outline research needed to fill these gaps to facilitate predictive models of disease risk and the development of novel disease control strategies. Key areas of uncertainty include: (i) the precise influence of deer abundance on tick abundance, (ii) how tick populations are regulated, (iii) assembly of host communities and tick-feeding patterns across different habitats, (iv) reservoir competence of host species, and (v) pathogenicity for humans of different genotypes of Borrelia burgdorferi . Filling these knowledge gaps will improve Lyme disease prevention and control and provide general insights into the drivers and dynamics of this emblematic multi-host–vector-borne zoonotic disease.

Philosophical Transactions of the Royal Society B:↗

Declines in body size of sockeye salmon associated with increased competition in the ocean

Declining body sizes have been documented for several species of Pacific salmon; however, whether size declines are caused mainly by ocean warming or other ecological factors, and whether they result primarily from trends in age at maturation or changing growth rates remain poorly understood. We quantified changes in mean body size and contributions from shifting size-at-age and age structure of mature sockeye salmon returning to Bristol Bay, Alaska, over the past 60 years. Mean length declined by 3%, corresponding to a 10% decline in mean body mass, since the early 1960s, though much of this decline occurred since the early 2000s. Changes in size-at-age were the dominant cause of body size declines and were more consistent than trends in age structure among the major rivers that flow into Bristol Bay. Annual variation in size-at-age was largely explained by competition among Bristol Bay sockeye salmon and interspecific competition with other salmon in the North Pacific Ocean. Warm winters were associated with better growth of sockeye salmon, whereas warm summers were associated with reduced growth. Our findings point to competition at sea as the main driver of sockeye salmon size declines, and emphasize the trade-off between fish abundance and body size.

Alaska↗

Winter behavior and ecology of the Alder Flycatcher (Empidonax alnorum) in Peru

The winter ecology and behavior of Alder Flycatchers (Empidonax alnorum) were studied along the Manu, a white-water meander river in Manu National Park, Madre de Dios, Peru?? during October and November, 1993 to 1997. The birds occupied territories in primary-succession habitats on growing point bars. They were most common in mixed stands of Tessaria integrifolia (Asteraceae) and Gynerium sagittatum (Gramineaceae) interspersed with bare sand areas. The uneven height of the Tessaria canopy, which resulted in openings in the vegetation large enough for the birds to flycatch, was an important habitat feature. Birds obtained insects, which formed about 96% of the diet, by aerial hawking (91%), perch gleaning (6%), and hover gleaning (3%). They also fed on fruit. Territory sizes ranged from 0.04 to 0.25 ha. Of nine territories that we observed closely, six were occupied by two birds each, two by one bird each, and one by three birds. Every territory had one dominant individual who was primarily responsible for territory defense; the other birds were associates. Vocalizations given included the fee-bee-o song, a two-syllable song, nd the pit note, which are also given on the breeding grounds. A series of pits given increasingly rapidly signaled a territorial interaction. In aggressive encounters, the birds (1) interacted vocally, remaining on their territories and counter calling or exchanging agitated calls; (2) moved toward a common territorial boundary and engaged in a vocal duel; or (3) the dominant chased intruders out of the territory. Chases were most common when a wave of new birds entered the area. Dominant birds, which sang the full song, were probably adult males. Immature males do not sing a full song, and females are not known to sing in nature. Associate individuals were likely females or young males. ?? The Neotropical Ornithological Society.

Ornitologia Neotropical↗

Network analysis of a northern long-eared bat (Myotis septentrionalis) maternity colony in a suburban forest patch

Many bat species are highly social, forming groups of conspecifics, particularly during the maternity season. In temperate North America, these social groups are typically comprised of closely related individuals or individuals that share some common trait (i.e. reproductive state or shared hibernacula from the previous winter). In the summer, when bats use forests for day-roosts, these social groups often demonstrate nonrandom patterns of periodically associating in common roosts and disassociating using different roosts as a ‘fission–fusion society’. As cave hibernating bat species in North America continue to decline due to the impacts of White-nose Syndrome, opportunities to describe these dynamics are becoming rare. Unfortunately, these patterns often are still poorly documented, yet understanding these behaviors is critical for species-specific habitat conservation and management. In our study, we tracked female northern long-eared bats ( Myotis septentrionalis ) to their day-roosts in a small, suburban forest fragment in coastal New York, USA, in the summers of 2018 and 2019. We confirmed that the bats shared roost sites and, using network analyses, analyzed social dynamics and space use. In contrast to previous research on this imperiled species in large, unfragmented core forests, we found a more dense, connected roost network that concentrated around forest patch edges. Unusual for this species, primary roosts were anthropogenic structures. Our findings suggest that northern long-eared bats can utilize small forest patches and that incorporation of specific types of anthropogenic roosts might be an effective strategy for long-term conservation in more urbanized landscapes where forest management actions to enhance day-roosting conditions a

New York↗

Predicting connectivity of green turtles at Palmyra Atoll, central Pacific: a focus on mtDNA and dispersal modelling

Population connectivity and spatial distribution are fundamentally related to ecology, evolution and behaviour. Here, we combined powerful genetic analysis with simulations of particle dispersal in a high-resolution ocean circulation model to investigate the distribution of green turtles foraging at the remote Palmyra Atoll National Wildlife Refuge, central Pacific. We analysed mitochondrial sequences from turtles ( n = 349) collected there over 5 years (2008–2012). Genetic analysis assigned natal origins almost exclusively (approx. 97%) to the West Central and South Central Pacific combined Regional Management Units. Further, our modelling results indicated that turtles could potentially drift from rookeries to Palmyra Atoll via surface currents along a near-Equatorial swathe traversing the Pacific. Comparing findings from genetics and modelling highlighted the complex impacts of ocean currents and behaviour on natal origins. Although the Palmyra feeding ground was highly differentiated genetically from others in the Indo-Pacific, there was no significant differentiation among years, sexes or stage-classes at the Refuge. Understanding the distribution of this foraging population advances knowledge of green turtles and contributes to effective conservation planning for this threatened species.

Journal of the Royal Society Interface↗

Spatio-temporal dynamics of species richness in coastal fish communities

Determining patterns of change in species richness and the processes underlying the dynamics of biodiversity are of key interest within the field of ecology, but few studies have investigated the dynamics of vertebrate communities at a decadal temporal scale. Here, we report findings on the spado-temporal variability in the richness and composition of fish communities along the Norwegian Skagerrak coast having been surveyed for more than half a century. Using statistical models incorporating non-detection and associated sampling variance, we estimate local species richness and changes in species composition allowing us to compute temporal variability in species richness. We tested whether temporal variation could be related to distance to the open sea and to local levels of pollution. Clear differences in mean species richness and temporal variability are observed between fjords that were and were not exposed to the effects of pollution. Altogether this indicates that the fjord is an appropriate scale for studying changes in coastal fish communities in space and time. The year-to-year rates of local extinction and turnover were found to be smaller than spatial differences in community composition. At the regional level, exposure to the open sea plays a homogenizing role, possibly due to coastal currents and advection.

Proceedings of the Royal Society B: Biological Sci↗

Nest-site selection and success of mottled ducks on agricultural lands in southwest Louisiana

Listing of the mottled duck (Anas fulvigula maculosa) as a priority species in the Gulf Coast Joint Venture of the North American Waterfowl Management Plan, coupled with recent declines of rice (Oryza sativa) acreage, led us to investigate the nesting ecology of this species on agricultural lands in southwest Louisiana. We examined nest-site selection at macro- and microhabitat levels, nest success, causes of nest failures, and habitat features influencing nest success. We found that female mottled ducks preferred to nest in permanent pastures with knolls (53% of nests) and idle fields (22% of nests). Vegetation height was greater at nests than at random points within the same macrohabitat patch. Successful nests were associated with greater numbers of plant species, located farther from water, and associated with higher vegetation density values than were unsuccessful nests. We determined that mammalian predators caused most nest failures (77% of 52 unsuccessful nests). Our results suggest that nest success of mottled ducks on agricultural lands in southwest Louisiana could be improved by 1) locating large permanent pastures and idle fields near rice fields and other available wetlands, 2) managing plant communities in these upland areas to favor dense stands of perennial bunch grasses, tall composites, dewberry (Rubus trivialis), and other native grasses and forbs, and 3) managing cattle-stocking rates and the duration and timing of grazing to promote tall, dense stands of these plant taxa during the nesting season (March-June).

Wildlife Society Bulletin↗

Response of fish population dynamics to mitigation activities in a large regulated river

Extensive water development in large rivers has precipitated many negative ecological effects on native fish populations. Mitigation for such development often focuses on restoring biological integrity through remediation of the physical and chemical properties of regulated rivers. However, evaluating and defining the success of those programs can be difficult. We modeled the influence of mitigation-related environmental factors on growth and recruitment of two ecologically important native fish species (Largescale Sucker Catostomus macrocheilus and Mountain Whitefish Prosopium williamsoni ) in the Kootenai River, Idaho. Artificial nutrient (phosphorus) addition best predicted the variability in annual growth of both species. Nutrient addition was positively related to Largescale Sucker growth but negatively related to Mountain Whitefish growth. The best model explained 82% of the annual variability in incremental growth for Largescale Suckers and 61% of the annual variability for Mountain Whitefish. Year-class strength of Largescale Suckers was not closely related to any of the environmental variables evaluated; however, year-class strength of Mountain Whitefish was closely associated with nutrient addition, discharge, and temperature. Most research has focused on biotic assemblages to evaluate the effects of mitigation activities on fishes, but there is an increased need to identify the influence of rehabilitation activities on fish population dynamics within those assemblages. Here, we demonstrate how fish growth can serve as an indicator of rehabilitation success in a highly regulated large river. Future fish restoration projects can likely benefit from a change in scope and from consideration of an evaluation framework involving the response of population rate functions to mitigation.

Idaho↗

Incorporating environmental heterogeneity and observation effort to predict host distribution and viral spillover from a bat reservoir

Predicting the spatial occurrence of wildlife is a major challenge for ecology and management. In Latin America, limited knowledge of the number and locations of vampire bat roosts precludes informed allocation of measures intended to prevent rabies spillover to humans and livestock. We inferred the spatial distribution of vampire bat roosts while accounting for observation effort and environmental effects by fitting a log Gaussian Cox process model to the locations of 563 roosts in three regions of Peru. Our model explained 45% of the variance in the observed roost distribution and identified environmental drivers of roost establishment. When correcting for uneven observation effort, our model estimated a total of 2340 roosts, indicating that undetected roosts (76%) exceed known roosts (24%) by threefold. Predicted hotspots of undetected roosts in rabies-free areas revealed high-risk areas for future viral incursions. Using the predicted roost distribution to inform a spatial model of rabies spillover to livestock identified areas with disproportionate underreporting and indicated a higher rabies burden than previously recognized. We provide a transferrable approach to infer the distribution of a mostly unobserved bat reservoir that can inform strategies to prevent the re-emergence of an important zoonosis.

Proceedings of the Royal Society B: Biological Sci↗

Age, growth, and trophic ecology of the Redeye Bass, an introduced invader of California rivers

Objective The Redeye Bass Micropterus coosae is a piscivore introduced into California, which has become a threat to the state's endemic freshwater fishes. It has eliminated native fishes from the middle reaches of the Cosumnes River, our study stream, which is the largest stream without a major dam on its main stem in the Sacramento–San Joaquin River drainage, central California, USA. We thoroughly documented its novel life history and ecology in California to shed light on why it has been such a successful invader despite its relatively small native range. Methods Over 4000 stable carbon and nitrogen isotope samples were utilized to refine our understanding of fish trophic position within the river food web, along with a stable isotope mixing model that accounts for uncertainty in trophic enrichment data. Result Growth was slow, with an adult size range of 9–25 cm standard length (SL), although few were larger than 15-cm SL (5–6 years old). Stable isotope analyses showed that Redeye Bass dominate the river ecosystem to the exclusion of most native fishes, occupying multiple trophic levels and microhabitats. Adults largely consumed non-native crayfish and large aquatic insects, while juveniles consumed aquatic insects, the size of prey increasing with Redeye Bass length. There was no evidence of cannibalism. Redeye Bass have effectively occupied the diverse trophic positions of at least four native fish species and have altered the trophic position of Rainbow Trout Oncorhynchus mykiss in sites where they co-occur with bass. Conclusion The introduction of Redeye Bass poses a continuing threat to native stream fishes in California and elsewhere.

Transactions of the American Fisheries Society↗

Control of ungulate numbers in a protected area

Successful long-term control of ungulate numbers within a protected area requires continuous review and refinement of management practices. Insights gained may have application to other sites. We evaluated management objectives and actions to control populations of exotic axis deer (Axis axis) and fallow deer (Dama dama) at Point Reyes National Seashore, California. Using records of numbers of each species culled from 1968 to 1996 and demographic data, we modeled each population's potential response to management actions and to the cessation of control in 1996. These simulations indicated that control measures hold numbers of both populations below ecological carrying capacity (K) and that populations of fallow and axis deer may have reached K within 5 to 13 years of ceasing control, respectively. We also simulated each population's response to removal of actual numbers of males killed but no females and actual numbers of females killed but no males from 1968 to 1996. Removing males only resulted in both populations reaching K. Removing females only led to the extirpation of both populations. Cessation of control activities prior to removal of all females resulted in recovery of both populations. A team of personnel expended an average of 1.75 work-hours/deer to remove 1,182 exotic deer of both species from 1984 to 1994. The work effort to kill each deer increased 2-fold from 1984 to 1994. The work effort required to remove s2 deer/day reached as great as 20 hours/deer. Elimination of the axis deer population is feasible and likely a more cost-effective management alternative than continued population control. Elimination of fallow deer is potentially more difficult but may be more costeffective than continuing control actions indefinitely. We recommend similar assessments of management alternatives to those charged with controlling ungulate numbers in protected areas.

California↗

Drainage-basis-scale geomorphic analysis to determine refernce conditions for ecologic restoration-Kissimmee River, Florida

Major controls on the retention, distribution, and discharge of surface water in the historic (precanal) Kissimmee drainage basin and river were investigated to determine reference conditions for ecosystem restoration. Precanal Kissimmee drainage-basin hydrology was largely controlled by landforms derived from relict, coastal ridge, lagoon, and shallow-shelf features; widespread carbonate solution depressions; and a poorly developed fluvial drainage network. Prior to channelization for flood control, the Kissimmee River was a very low gradient, moderately meandering river that flowed from Lake Kissimmee to Lake Okeechobee through the lower drainage basin. We infer that during normal wet seasons, river discharge rapidly exceeded Lake Okeechobee outflow capacity, and excess surface water backed up into the low-gradient Kissimmee River. This backwater effect induced bankfull and peak discharge early in the flood cycle and transformed the flood plain into a shallow aquatic system with both lacustrine and riverine characteristics. The large volumes of surface water retained in the lakes and wetlands of the upper basin maintained overbank flow conditions for several months after peak discharge. Analysis indicates that most of the geomorphic work on the channel and flood plain occurred during the frequently recurring extended periods of overbank discharge and that discharge volume may have been significant in determining channel dimensions. Comparison of hydrogeomorphic relationships with other river systems identified links between geomorphology and hydrology of the precanal Kissimmee River. However, drainage-basin and hydraulic geometry models derived solely from general populations of river systems may produce spurious reference conditions for restoration design criteria.

Florida↗

A multi-species, multi-season evaluation of body condition effects on fish survival in a coolwater stream

Objective Body condition is often used as a surrogate of individual fitness in fisheries ecology and management, but empirical data demonstrating this linkage are few. Here, we investigated whether weight at length (i.e., body condition) explained individual variation in survival. Methods We conducted a mark–recapture survey of three native fishes subseasonally (every 2 months) over 28 months in a coolwater Piedmont stream in South Carolina, United States. We used a Cormack–Jolly–Seber model in the Bayesian state–space framework to characterize whether survival was explained by body condition. Results Body condition changed subseasonally, with its peak in spring (May) and trough in fall (November) in all three species (Bluehead Chub Nocomis leptocephalus , Creek Chub Semotilus atromaculatus , and Mottled Sculpin Cottus bairdii ). Survival decreased in warmer subseasons for all species. Additionally, individuals with higher body condition survived better than those with lower condition only in these warmer subseasons and only in the Mottled Sculpin, a species that is territorial and the most intolerant of warmer temperatures among the study species. Conclusions Our findings show that body condition is a predictor of survival only when populations undergo high mortalities in some but not all species, which are likely caused by a combination of factors, such as physiological stress, diminished food resources, and increased competition for resources.

South Carolina↗

A protocol for assessing bias and robustness of social network metrics using GPS based radio-telemetry data

Background Social network analysis of animal societies allows scientists to test hypotheses about social evolution, behaviour, and dynamic processes. However, the accuracy of estimated metrics depends on data characteristics like sample proportion, sample size, and frequency. A protocol is urgently needed to assess for bias and robustness of social network metrics estimated for the animal populations especially when a limited number of individuals are monitored. Methods We used GPS telemetry datasets of five ungulate species to combine known social network approaches with novel ones into a comprehensive five-step protocol. To quantify the bias and uncertainty in the network metrics obtained from a partial population, we presented novel statistical methods which are particularly suited for autocorrelated data, such as telemetry relocations. The protocol was validated using a sixth species, the fallow deer, with a known population size where ⇠ 85% of the individuals have been directly monitored. Results Through the protocol, we demonstrated how pre-network data permu tations allow researchers to assess non-random aspects of interactions within a population. The protocol assesses bias in global network metrics, obtains confidence intervals, and quantifies uncertainty of global and node-level network metrics based on the number of nodes in the network. We found that global network metrics like density remained robust even with a lowered sample size, while local network metrics like eigenvector centrality were unreliable for four of the species. The fallow deer network showed low uncertainty and bias even at lower sampling proportions, indicating the importance of a thoroughly sampled population while demonstrating the accuracy of our evaluation methods for smaller samples. Conclusions The protocol allows researchers to analyse GPS-based radio telemetry or other data to determine the reliability of social network metrics. The estimates enable the statistical comparison of networks under di↵erent conditions, such as analysing daily and seasonal changes in the density of a network. The methods can also guide methodological decisions in animal social network research, such as sampling design and allow more accurate ecological inferences from the available data. The R package aniSNA enables researchers to implement this workflow on their dataset, generating reliable inferences and guiding methodological decisions

Article↗

Potential effects of energy development on environmental resources of the Williston Basin in Montana, North Dakota, and South Dakota—Species of conservation concern

The ecosystems of the Williston Basin provide direct and indirect benefits to society. These benefits include carbon sequestration, flood control, nutrient rich soils for agricultural productivity, and habitat for wildlife. This chapter’s main focus is on the effects of energy development on species that occupy the ecosystems in the Williston Basin. We compiled a list of documented species of conservation concern that are of most interest to Federal regulators and resource managers. Species of concern were either listed as endangered or threatened under the Endangered Species Act or listed by States as species of concern in Natural Heritage Program checklists or State Wildlife Action Plans. All told, we determined that 357 species of concern likely occupy the Williston Basin. These species represented seven different taxonomic groups: plants (native and nonnative), terrestrial invertebrates, birds, mammals, reptiles and amphibians, and fish and mussels. We reviewed the existing scientific information pertaining to potential effects of energy development on these taxonomic groups. Currently, little is known about the abundance and distribution of many of these species. But some information exists that may be useful in predicting the potential effects of energy development on certain taxonomic groups. Most of this information has been developed through scientific research focused on effects to mammal and bird populations. Effects to other taxonomic groups seems to be understudied. In general, it seems that disturbances and modifications associated with development have the potential to negatively affect a wide range of species; however, many studies produce uncertain results because they are not designed to compare populations before and after energy development takes place. Most of these studies also do not monitor resources over multiple years and thus cannot detect population trends. Likewise, there are few examples of landscape-scale assessments of the cumulative effects of energy development that could be used for species or habitat management purposes. We suggest that more research needs to be completed to measure potential effects to a broad range of species in multiple taxonomic groups. This may require also developing some understanding about the basic ecology of many of the species covered in this report. In concert with this more basic research, we also suggest that more comprehensive assessments of potential negative cumulative effects across the Williston Basin should be developed in an effort to guide more strategic management of biological resources.

Montana, North Dakota, South Dakota↗

Biodiversity underpins fisheries resilience to exploitation in the Amazon River basin.

Inland fisheries feed greater than 150 million people globally, yet their status is rarely assessed due to their socio-ecological complexity and pervasive lack of data. Here, we leverage an unprecedented landings time series from the Amazon, Earth's largest river basin, together with theoretical food web models to examine (i) taxonomic and trait-based signatures of exploitation in inland fish landings and (ii) implications of changing biodiversity for fisheries resilience. In both landings time series and theory, we find that multi-species exploitation of diverse inland fisheries results in a hump-shaped landings evenness curve. Along this trajectory, abundant and large species are sequentially replaced with faster growing and smaller species. Further theoretical analysis indicates that harvests can be maintained for a period of time but that continued biodiversity depletion reduces the pool of compensating species and consequently diminishes fisheries resilience. Critically, higher fisheries biodiversity can delay fishery collapse. Although existing landings data provide an incomplete snapshot of long-term dynamics, our results suggest that multi-species exploitation is affecting freshwater biodiversity and eroding fisheries resilience in the Amazon. More broadly, we conclude that trends in landings evenness could characterize multi-species fisheries development and aid in assessing their sustainability.

Amazon River basin↗

Sampling effort affects multivariate comparisons of stream assemblages

Multivariate analyses are used widely for determining patterns of assemblage structure, inferring species–environment relationships and assessing human impacts on ecosystems. The estimation of ecological patterns often depends on sampling effort, so the degree to which sampling effort affects the outcome of multivariate analyses is a concern. We examined the effect of sampling effort on site and group separation, which was measured using a mean similarity method. Two similarity measures, the Jaccard Coefficient and Bray–Curtis Index were investigated with 1 benthic macroinvertebrate and 2 fish data sets. Site separation was significantly improved with increased sampling effort because the similarity between replicate samples of a site increased more rapidly than between sites. Similarly, the faster increase in similarity between sites of the same group than between sites of different groups caused clearer separation between groups. The strength of site and group separation completely stabilized only when the mean similarity between replicates reached 1. These results are applicable to commonly used multivariate techniques such as cluster analysis and ordination because these multivariate techniques start with a similarity matrix. Completely stable outcomes of multivariate analyses are not feasible. Instead, we suggest 2 criteria for estimating the stability of multivariate analyses of assemblage data: 1) mean within-site similarity across all sites compared, indicating sample representativeness, and 2) the SD of within-site similarity across sites, measuring sample comparability.

Journal of the North American Benthological Societ↗

Effects of surgically implanted transmitters on reproduction and survival in mallards

Abdominally implanted radiotransmitters have been widely used in studies of waterbird ecology; however, the longer handling times and invasiveness of surgical implantation raise important concerns about animal welfare and potential effects on data quality. Although it is difficult to assess effects of handling and marking wild animals by comparing them with unmarked controls, insights can often be obtained by evaluating variation in handling or marking techniques. Here, we used data from 243 female mallards ( Anas platyrhynchos ) and mallard–grey duck hybrids ( A. platyrhynchos × A. superciliosa ) equipped with fully encapsulated abdominally implanted radiotransmitters from 2 study sites in New Zealand during 2014–2015 to assess potential marking effects. We evaluated survival, dispersal, and reproductive effort (e.g., breeding propensity, nest initiation date, clutch size) in response to 3 different attributes of handling duration and procedures: 1) processing time, including presurgery banding, measurements, and blood sampling of unanaesthetized birds; 2) surgery time from initiation to cessation of anesthetic; and 3) total holding time from first capture until release. We found no evidence that female survival, dispersal probability, or reproductive effort were negatively affected by holding, processing, or surgery time and concluded that we collected reliable data without compromising animal welfare. Our results support previous research that techniques using fully encapsulated abdominal-implant radiotransmitters are suitable to enable researchers to obtain reliable estimates of reproductive performance and survival.

Wildlife Society Bulletin↗