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At least 559 records · Page 31Linked to original sources
USGS2010

Prevalence of antibodies to type A influenza virus in wild avian species using two serologic assays

Serologic testing to detect antibodies to avian influenza (AI) virus has been an underused tool for the study of these viruses in wild bird populations, which traditionally has relied on virus isolation and reverse transcriptase-polymerase chain reaction (RT-PCR). In a preliminary study, a recently developed commercial blocking enzyme-linked immunosorbent assay (bELISA) had sensitivity and specificity estimates of 82% and 100%, respectively, for detection of antibodies to AI virus in multiple wild bird species after experimental infection. To further evaluate the efficacy of this commercial bELISA and the agar gel immunodiffusion (AGID) test for AI virus antibody detection in wild birds, we tested 2,249 serum samples collected from 62 wild bird species, representing 10 taxonomic orders. Overall, the bELISA detected 25.4% positive samples, whereas the AGID test detected 14.8%. At the species level, the bELISA detected as many or more positive serum samples than the AGID in all 62 avian species. The majority of positive samples, detected by both assays, were from species that use aquatic habitats, with the highest prevalence from species in the orders Anseriformes and Charadriiformes. Conversely, antibodies to AI virus were rarely detected in the terrestrial species. The serologic data yielded by both assays are consistent with the known epidemiology of AI virus in wild birds and published reports of host range based on virus isolation and RT-PCR. The results of this research are also consistent with the aforementioned study, which evaluated the performance of the bELISA and AGID test on experimental samples. Collectively, the data from these two studies indicate that the bELISA is a more sensitive serologic assay than the AGID test for detecting prior exposure to AI virus in wild birds. Based on these results, the bELISA is a reliable species-independent assay with potentially valuable applications for wild bird AI surveillance.

Alaska, California, Delaware, Georgia, Michigan, M↗
USGS1994

Famphur Hazards to Fish, Wildlife, and Invertebrates: A Synoptic Review

Famphur (phosphorothioic acid, O,(4((dimethylamino)sulfonyl),phenoyl)O,Odimethyl ester), also known as Warbex, is a systemic organophosphorus insecticide used almost exclusively as a veterinary chemical to control parasite in livestock. Only famphur and its oxygen analog, famoxon, were of toxicological significance; other famphur metabolites were 31 to 237 times less toxic, as Judged by acute oraltoxicity tests in the mouse (Mus sp.). Famphur is administered to livestock by intramuscular or subcutaneous injection, through the diet, as a dermal pour-on, or as an oral bolus. Current recommendations include the discontinuance of topical applications of famphur to cattle because of its association with primary and secondary poisoning of birds, and more research on famphur in the three areas of latent effects on treated livestock, fate and effects in aquatic ecosystems, and carcinogenicity evaluation.

Contaminant Hazard Reviews↗
USGS2005

Coral disease and health workshop: Coral histopathology II, July 12-14, 2005

The health and continued existence of coral reef ecosystems are threatened by an increasing array of environmental and anthropogenic impacts. Coral disease is one of the prominent causes of increased mortality among reefs globally, particularly in the Caribbean. Although over 40 different coral diseases and syndromes have been reported worldwide, only a few etiological agents have been confirmed; most pathogens remain unknown and the dynamics of disease transmission, pathogenicity and mortality are not understood. Causal relationships have been documented for only a few of the coral diseases, while new syndromes continue to emerge. Extensive field observations by coral biologists have provided substantial documentation of a plethora of new pathologies, but our understanding, however, has been limited to descriptions of gross lesions with names reflecting these observations (e.g., black band, white band, dark spot). To determine etiology, we must equip coral diseases scientists with basic biomedical knowledge and specialized training in areas such as histology, cell biology and pathology. Only through combining descriptive science with mechanistic science and employing the synthesis epizootiology provides will we be able to gain insight into causation and become equipped to handle the pending crisis. One of the critical challenges faced by coral disease researchers is to establish a framework to systematically study coral pathologies drawing from the field of diagnostic medicine and pathology and using generally accepted nomenclature. This process began in April 2004, with a workshop titled Coral Disease and Health Workshop: Developing Diagnostic Criteria co-convened by the Coral Disease and Health Consortium (CDHC), a working group organized under the auspices of the U.S. Coral Reef Task Force, and the International Registry for Coral Pathology (IRCP). The workshop was hosted by the U.S. Geological Survey, National Wildlife Health Center (NWHC) in Madison, Wisconsin and was focused on gross morphology and disease signs observed in the field. A resounding recommendation from the histopathologists participating in the workshop was the urgent need to develop diagnostic criteria that are suitable to move from gross observations to morphological diagnoses based on evaluation of microscopic anatomy. As a continuation of building the foundation and framework for coral disease diagnostics, the CDHC convened the Coral Disease and Health Workshop: Coral Histopathology II in Charleston, South Carolina, July 11-14, 2005. The workshop was hosted by the Department of Pathology and Laboratory Medicine at the Medical University of South Carolina, Charleston, SC which provided expertise, facilities and equipment in support of the workshop. All of the histological slides and related photographs used in the discussions were prepared and supplied by the IRCP. This workshop brought together 15 experts in veterinary and medical pathology and coral biology from national and international research institutes and government laboratories. The mission was to devise a standardized approach to examining microscopic anatomy and pathology of corals and a standardized nomenclature to facilitate accurate descriptions of the microscopic morphology of corals and enhance communication among specialists investigating causes of coral death. 2 The participants of this workshop deliberated for 3 days to refine the nomenclature for gross and microscopic anatomy of corals and systematically described microscopic changes associated with selected coral diseases. The findings and recommendations from the deliberations will be submitted to the research community for peer review. The standardized nomenclature and descriptions produced at this workshop will ultimately be made available to the scientific community through a variety of media including the World Wide Web. An exciting highlight of this meeting was provided by Professor Robert Ogilvie (MUSC Department of Cell Biology and Anatomy) when he introduced participants to a new digital technology that is revolutionizing histology and histopathology in the medical field. The Virtual Slide technology creates digital images of histological tissue sections by computer scanning actual slides in high definition and storing the images for retrieval and viewing. Virtual slides now allow any investigator with access to a computer and the web to view, search, annotate and comment on the same tissue sections in real time. Medical and veterinary slide libraries across the country are being converted into virtual slides to enhance biomedical education, research and diagnosis. The coral health and disease researchers at this workshop deem virtual slides as a significant way to increase capabilities in coral histology and a means for pathology consultations on coral disease cases on a global scale.

NOAA Technical Memorandum↗
USGS1988

Selawik National Wildlife Refuge land cover mapping project users guide

Title III of the Alaska National Interest Lands Conservation Act (ANILCA, 1980) established the Selawik National Wildlife Refuge (SNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall "identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological, historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities...; d) present the potential requirements for access with respect to the refuge...; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described..." (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U.S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner (MSS) data and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for the refuge and because the level of detail obtained from Landsat data was adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska↗
USGS1989

Effects of fire in the Northern Great Plains

This publication is a review of selected literature about prescribed burning in the Northern Great Plains (NGP) for management of wildlife. It also will be useful to other resource managers and researchers and to persons interested in the NGP. It is more 'descriptive' than 'interpretative.'The publication is a joint effort of the South Dakota State Cooperative Fish and Wildlife Research Unit (SDCFWRU), South Dakota State University, Brookings; the Northern Prairie Wildlife Research Center (NPWRC), Jamestown, N.D.; and the U.S. Fish and Wildlife Service (USFWS), Fergus Falls, Minn. Manuscript typing and library services were shared between SDCFWRU and NPWRC.This publication (EC 761) is the second of three SDSU Extension circulars on grassland fires. EC 760 is Prescribed burning guidelines in the Northern Great Plains; EC 762 is Annotated bibliography of fire literature relative to northern grasslands in South-Central Canada and North-Central United States and contains many more citations than presented in this publication. All three circulars may be obtained from either the Wildlife and Fisheries Sciences Department; SDSU Box 2206; ph (605) 688-6121; or from the Ag Communications Bulletin Room; SDSU Box 2231; ph (605) 688-5628; both in Brookings, S.D. 57007.

Report↗
USGS2021

Diet composition of the African manatee: Spatial and temporal variation within the Sanaga River Watershed, Cameroon

The present study aimed to investigate the diet of African manatees in Cameroon to better inform conservation decisions within protected areas. A large knowledge gap on diet and seasonal changes in forage availability limits the ability to develop informed local management plans for the African manatee in much of its range. This research took place in the Sanaga River Watershed, which includes two protected areas in the Littoral Region of Cameroon: the Douala-Edea National Park and the Lake Ossa Wildlife Reserve. We analyzed 113 manatee fecal samples and surveyed shoreline emergent and submerged vegetation within the Sanaga River Watershed. We used microhistological analyses to determine the relative contribution of each plant species to African manatee diets and compared across locations and across seasons (wet vs. dry season). We found that the shoreline vegetation is diverse with over 160 plant species, unevenly distributed across space and season, and dominated by emergent vegetation mostly represented by the antelope grass ( Echinochloa pyramidalis ). We recorded a total of 36 plant species from fecal samples with a spatial and temporal distribution mostly reflecting that of the corresponding shoreline vegetation. African manatees appear to be primarily opportunistically feeding on available vegetation across the seasons and habitat. This work documents the current, but changing, state of plant availability in the Sanaga River Watershed and reports the African manatee diet in Cameroon for the first time. This information can play a critical role in successfully managing the species and these protected areas. If we wish to protect the African manatee and the aquatic ecosystems within the Sanaga River Watershed, we must understand how forage availability changes over time, especially as its waters become nutrient enriched, eutrophic, and exposed to invasive species of plants in a changing world.

Douala-Edea National Park, Lake Ossa Wildlife Rese↗
USGS2016

Retrospective: Adjusting contaminant concentrations in bird eggs to account for moisture and lipid Loss during their incubation

By the 1960s, research and monitoring efforts on chlorinated pesticide residues in tissues of wildlife were well underway in North America and Europe. Conservationists and natural resource managers were attempting to resolve whether pesticide exposure and accumulated residues were related to population declines in several species of predatory and scavenging birds (e.g., bald eagle Haliaeetus leucocephalus , peregrine falcon Falco peregrinus , brown pelican Pelecanus occidentalis and osprey Pandion haliaetus ). The avian egg was a favored sampling matrix even before the realization that eggshell thinning was linked to population declines (Ratcliffe 1967 ; Hickey and Anderson 1968 ) and that the concentration of p,p ’-DDE in an egg was associated with the shell thinning phenomenon (e.g., Blus et al. 1972 ; Wiemeyer et al. 1988 ). The necessity for making wet-weight concentration adjustments to account for natural moisture loss during incubation of viable eggs was realized. Correction for the more dramatic moisture loss in non-viable decaying eggs was recognized as being paramount. For example, the ∑DDT residues in osprey eggs were reported to vary by as much as eightfold without accounting for moisture loss adjustments (Stickel et al. 1965 ). In the absence of adjusting concentrations to the fresh wet-weight that was present at the time of egg laying, the uncorrected values exaggerated contaminant concentrations, yielding artifactual results and ultimately incorrect conclusions. The adjustment to fresh wet-weight concentration is equally important for many other persistent contaminants including PCBs, dioxins, furans, and brominated diphenyl ethers.

Bulletin of Environmental Contamination and Toxico↗
USGS2012

Understanding pesticides in California's Delta

The Sacramento-San Joaquin River Delta (Delta) is the hub of California’s water system and also an important habitat for imperiled fish and wildlife. Aquatic organisms are exposed to mixtures of pesticides that flow through the maze of Delta water channels from sources including agricultural, landscape, and urban pest-control applications. While we do not know all of the effects pesticides have on the ecosystem, there is evidence that they cause some damage to organisms in the Delta. Decades of USGS research have provided a good understanding of when, where, and how pesticides enter the Delta. However, pesticide use is continually changing. New field studies and methods are needed so that scientists can analyze which pesticides are present in the Delta, and at what concentrations, enabling them to estimate exposure and ultimate effects on organisms. Continuing research will provide resource managers and stakeholders with crucial information to manage the Delta wisely.

California↗
USGS1987

Yukon Flats National Wildlife Refuge land cover mapping project user's guide

Title III of the Alaska National Interest Lands Conservation Act (ANILCA, 1980) established the Yukon Flats National Wildlife Refuge (YFNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall "identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological , historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities...; d) present the potential requirements for access with respect to the refuge...; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described..." (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner (MSS) data and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail obtained from Landsat data was adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska↗
USGS2013

Greater Sage-Grouse National Research Strategy

The condition of the sagebrush ecosystem has been declining in the Western United States, and greater sage-grouse (Centrocercus urophasianus), a sagebrush-obligate species, has experienced concurrent decreases in distribution and population numbers. This has prompted substantial research and management over the past two decades to improve the understanding of sage-grouse and its habitats and to address the observed decreases in distribution and population numbers. The amount of research and management has increased as the year 2015 approaches, which is when the U.S. Fish and Wildlife Service (FWS) is expected to make a final decision about whether or not to protect the species under the Endangered Species Act. In 2012, the Sage-Grouse Executive Oversight Committee (EOC) of the Western Association of Fish and Wildlife Agencies (WAFWA) requested that the U.S. Geological Survey (USGS) lead the development of a Greater Sage-Grouse National Research Strategy (hereafter Research Strategy). This request was motivated by a practical need to systematically connect existing research and conservation plans with persisting or emerging information needs. Managers and researchers also wanted to reduce redundancy and help focus limited funds on the highest priority research and management issues. The USGS undertook the development of this Research Strategy, which addresses information and science relating to the greater sage-grouse and its habitat across portions of 11 Western States. This Research Strategy provides an outline of important research topics to ensure that science information gaps are identified and documented in a comprehensive manner. Further, by identifying priority topics and critical information needed for planning, research, and resource management, it provides a structure to help coordinate members of an expansive research and management community in their efforts to conduct priority research.

California, Colorado, Idaho, Montana, Nevada, Nort↗
USGS2014

Synthesis of studies in the fall low-salinity zone of the San Francisco Estuary, September-December 2011

In fall 2011, a large-scale investigation (fall low-salinity habitat investigation) was implemented by the Bureau of Reclamation in cooperation with the Interagency Ecological Program to explore hypotheses about the ecological role of low-salinity habitat in the San Francisco Estuary—specifically, hypotheses about the importance of fall low-salinity habitat to the biology of delta smelt Hypomesus transpacificus , a species endemic to the San Francisco Estuary and listed as threatened or endangered under federal and state endangered species legislation. The Interagency Ecological Program is a consortium of 10 agencies that work together to develop a better understanding of the ecology of the Estuary and the effects of the State Water Project and Federal Central Valley Project operations on the physical, chemical, and biological conditions of the San Francisco Estuary. The fall low-salinity habitat investigation constitutes one of the actions stipulated in the Reasonable and Prudent Alternative issued with the 2008 Biological Opinion of the U.S. Fish and Wildlife Service, which called for adaptive management of fall Sacramento-San Joaquin Delta outflow following “wet” and “above normal” water years to alleviate jeopardy to delta smelt and adverse modification of delta smelt critical habitat. The basic hypothesis of the adaptive management of fall low-salinity habitat is that greater outflows move the low-salinity zone (salinity 1–6), an important component of delta smelt habitat, westward and that moving the low-salinity zone westward of its position in the fall of recent years will benefit delta smelt, although the specific mechanisms providing such benefit are uncertain. An adaptive management plan was prepared to guide implementation of the adaptive management of fall low-salinity habitat and to reduce uncertainty. This report has three major objectives: • To provide a summary of the results from the first year of coordinated fall low-salinity habitat studies and monitoring. • To provide a synthesis of the results of the fall low-salinity habitat studies and other ongoing research and monitoring, to determine if the available information supports the hypotheses behind the adaptive management of fall low-salinity habitat as set forth in the adaptive management plan. • To begin to put the results from the fall low-salinity habitat studies into context within the larger body of knowledge regarding the San Francisco Estuary and, in particular, the upper San Francisco Estuary, including the Sacramento-San Joaquin Delta, Suisun Bay, and associated embayments. The basic approach of this report is to evaluate predictions derived from the hypotheses included in the conceptual model developed within the adaptive management plan. All available data from studies and monitoring conducted in fall 2011 and similar data from fall 2006, which was the most recent wet year preceding 2011, were considered. Data from 2005 and 2010 were also considered, to include the conditions antecedent to those years. Many of the predictions either could not be evaluated with the data available, or the needed data were not collected. Most of the predictions that could be addressed involved either the abiotic habitat components (that is, the physical environment) or delta smelt responses. In general, the fall low-salinity habitat investigation has been largely inconclusive as of the writing of this report. This is not to be unexpected in the first year of what is intended to be a multi-year adaptive-management effort. This report can be viewed as the first chapter of a “living document” that is to be continually updated as part of the adaptive management cycle. The results of this report, especially predictions with insufficient data for evaluation, indicate a number of science-based approaches to improve the fall low-salinity habitat investigations: • Develop a method of measuring “hydrodynamic complexity.” This concept is central to a number of the predictions that could not be evaluated. • Determine if wind speed warrants a stand-alone prediction. The wind-speed prediction is directly related to the turbidity predictions, and wind is only one of several factors important for determining turbidity. • Determine the correct spatial and temporal scale or scales necessary for monitoring and for studies to address the predicted abiotic and biotic responses. Many of the assessments in this report were based on monthly sampling of dynamic habitat components, such as phytoplankton and zooplankton populations, that can change on daily scales. • Address the nutrient predictions as part of developing a phytoplankton production model that includes nutrient cycling and other important processes, if feasible. At a minimum develop a mechanistic conceptual model to support more processed-based interpretations of data or design of new studies, rather than making simple predictions of increase or decrease. • Determine if studies of predation rates are feasible in areas where there are delta smelt.

California↗
USGS2012

Nature's Notebook 2011: Data & participant summary

Introduction The USA National Phenology Network The USA National Phenology Network (USA‐NPN; www.usanpn.org) seeks to engage a diverse range of citizen scientist volunteers, federal, state, and non‐governmental organizations, educators and professional research scientists to collect phenological observations of plants and animals using consistent standards and to contribute their observations to a national data repository. To guide this effort, the USA‐NPN National Coordinating Office (NCO), based in Tucson, Arizona, implemented an online monitoring program for plants and animals, Nature's Notebook , and has developed phenology monitoring protocols and an information management system, which includes the National Phenology Database (NPDb). We are developing a diversity of materials, tools, techniques, and protocols to assist decision making and education related to ecology, wildlife, human health, ecosystem services, natural resource management, biological conservation, and climate change adaptation.

USA-NPN Technical Series↗
USGS1990

Loss of coastal wetlands in Louisiana: Cooperative research to assess the critical processes

Erosion of the nation's shoreline and loss and deterioration of our coastal wetlands are widespread and serious problems that affect all regions of the US. As a result of natural and human-induced factors, the coastal plain of Louisiana, which contains 40% of the tidal wetlands in the conterminous 48 States, is undergoing the greatest amount of coastal erosion and wetlands loss in the nation. The barrier islands that provide a natural buffer for Louisiana's deltaic plain environments are experiencing erosion rates of 20m/yr, while wetlands losses are about 100km2/yr. In response to these problems and the lack of scientific understanding of the processes causing erosion and land loss, the US Geological Survey has, since 1986, conducted field investigations in Louisiana, working closely with the US Fish and Wildlife Service and other Federal and State agencies.

Biological Report - US Fish & Wildlife Service↗
USGS1987

Tetlin National Wildlife Refuge land cover mapping project users guide

Title III of the Alaska National Interest Lands Conservation Act of 1980 (ANILCA, 1980) established the Tetlin National Wildlife Refuge (TNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological, historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities… ; d) present the potential requirements for access with respect to the refuge… ; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described... (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner data (MSS) and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail, obtained from the analysis of Landsat data, is adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska↗
USGS2008

Wyoming Landscape Conservation Initiative Science Workshop Proceedings, May 15-17, 2007

The U.S. Geological Survey (USGS) hosted a Wyoming Landscape Conservation Initiative (WLCI) Science Workshop at the University of Wyoming on May 15, 16, and 17, 2007. The goal of the workshop was to gather information from stakeholders about research needs and existing data resources to help develop the USGS WLCI science plan. The workshop focused on six research and management needs identified by WLCI partners prior to the workshop: *evaluate the cumulative effects of development activities; *identify key drivers of change; *identify condition and distribution of key wildlife species, habitat, and species habitat requirements; *evaluate wildlife and livestock responses to development; *develop an integrated inventory and monitoring strategy; and *develop a data clearinghouse and an information-management framework. These topics correlated to six plenary panels and discussions and six breakout sessions. Several collective needs were identified: *create a long-term, accessible information database; *identify key habitats, indicator species; *collect and research missing critical baseline data; *begin on-the-ground projects as soon as possible; and *implement a monitoring program to assist with adaptive management techniques. Several concerns were expressed repeatedly: *secure adequate and long-term funding; *meeting the WLCI workload with agencies that are already understaffed; *assess cumulative effects as an analysis approach; *perform offsite mitigation in a way that is valuable and effective; *focus all research on providing practical applications; and *involve the public in WLCI proceedings.

Scientific Investigations Report↗
USGS2012

Relative abundance and distribution of fishes and crayfish at Ash Meadows National Wildlife Refuge, Nye County, Nevada, 2010-11

Introduction Ash Meadows National Wildlife Refuge (AMNWR) was established by the U.S. Fish and Wildlife Service (with the assistance of The Nature Conservancy) in 1984 to protect one of the highest concentrations of endemic flora and fauna in North America (Pister, 1985; Sada, 1990). Prior to federal acquisition, Ash Meadows had been anthropogenically altered, and non-native species had been introduced to the detriment of native species; reports and published literature document the negative effects to the Ash Meadows flora and fauna (Deacon and others, 1964; U.S. Department of the Interior, 1971; Landye, 1973; Pister, 1974; Soltz and Naiman, 1978; Taylor, 1980; Williams and others, 1985; Williams and Sada, 1985; Baugh and others, 1986; Hershler and Sada, 1987; Knight and Clemmer, 1987; Sada, 1990; Deacon and Williams, 1991; Scoppettone and others, 2005; Kennedy and others, 2006). Such activities led to the extinction of the endemic Ash Meadows poolfish ( Empetrichthyes merriami ) (Miller, 1961; Soltz and Naiman, 1978), and subsequently the federal government listed three local endemic fish as endangered pursuant to the Endangered Species Act (U.S. Fish and Wildlife Service, 1989)—Warm springs pupfish ( Cyprinodon nevadensis pectoralis ), Ash Meadows Amargosa pupfish ( Cyprinodon nevadensis mionectes ), and Ash Meadows speckled dace ( Rhinichthys osculus nevadensis ). Public ownership of a large portion of Ash Meadows provided the opportunity to restore the landscape to some semblance of its historical condition. Elimination of invasive aquatic species may be more difficult than landscape restoration, and their persistence can cause additional native fish decline or extirpation (Taylor and others, 1984; Moyle and others, 1986; Miller and others, 1989; Minckley and Deacon, 1991; Olden and Poff, 2005). Chemical treatment to remove invasive fishes is often unsuccessful (Meffe, 1983; Rinne and Turner, 1991; Meronek and others, 1996). In Ash Meadows, there has been some success in chemical eradication of localized populations of largemouth bass ( Micropterus salmoides ) and black bullhead ( Ameiurus melas ) (St. George, 1998, 1999; Weissenfluh, 2008b), as well as convict cichlid (Archocentrus nigrofasciatus) and sailfin molly ( Poecilia latipinna ) (Weissenfluh,2008a). However, there has been less success in removing western mosquitofish ( Gambusia affinis ) from Ash Meadows’s larger spring systems, and sailfin molly maintains strongholds in several spring systems (Scoppettone and others, 2011b). Perhaps the more destructive invasive species are two invertebrates: red swamp crayfish ( Procambarus clarkii ) and red-rim melania ( Melanoides tuberculata ). Following the appearance of red swamp crayfish within the Warm Springs Complex, Warm Springs pupfish was believed to be extirpated from one spring system (St. George, 2000) and near extirpation in two others (Darrick Weissenfluh, Ash Meadows National Wildlife Refuge, oral commun., 2008, 2011). Crayfish also were demonstrated to greatly suppress the Bradford Springs population of Ash Meadows speckled dace population (McShane and others, 2004). Red-rim melania is known to displace native snail populations (Mitchell and others, 2007), and has been implicated as an agent of extinction of native Ash Meadows spring-snails (Donald Sada, Desert Research Institute, oral commun., 2011). Both invasive invertebrates are difficult to control or eradicate (Mitchell and others, 2007; Freeman and others, 2010). Habitat restoration that favors native species can help control non-native species (McShane and others, 2004; Scoppettone and others, 2005; Kennedy and others, 2006). Restoration of Carson Slough and its tributaries present an opportunity to promote habitat types that favor native species over non-natives. Historically, the majority of Ash Meadows spring systems were tributaries to Carson Slough. In 2007 and 2008, a survey of Ash Meadows spring systems was conducted to generate baseline information on the distribution of fishes throughout AMNWR (Scoppettone and others, 2011b). In this study, we conducted a follow-up survey with emphasis on upper Carson Slough. This permitted us to gauge the early effects of spring system restoration on fish populations and to generate further baseline data relevant to future restoration efforts.

Nevada↗
USGS2014

Brine contamination to aquatic resources from oil and gas development in the Williston Basin, United States

The Williston Basin, which includes parts of Montana, North Dakota, and South Dakota in the United States and the provinces of Manitoba and Saskatchewan in Canada, has been a leading domestic oil and gas producing region for more than one-half a century. Currently, there are renewed efforts to develop oil and gas resources from deep geologic formations, spurred by advances in recovery technologies and economic incentives associated with the price of oil. Domestic oil and gas production has many economic benefits and provides a means for the United States to fulfill a part of domestic energy demands; however, environmental hazards can be associated with this type of energy production in the Williston Basin, particularly to aquatic resources (surface water and shallow groundwater) by extremely saline water, or brine, which is produced with oil and gas. The primary source of concern is the migration of brine from buried reserve pits that were used to store produced water during recovery operations; however, there also are considerable risks of brine release from pipeline failures, poor infrastructure construction, and flow-back water from hydraulic fracturing associated with modern oilfield operations. During 2008, a multidisciplinary (biology, geology, water) team of U.S. Geological Survey researchers was assembled to investigate potential energy production effects in the Williston Basin. Researchers from the U.S. Geological Survey participated in field tours and met with representatives from county, State, tribal, and Federal agencies to identify information needs and focus research objectives. Common questions from agency personnel, especially those from the U.S. Fish and Wildlife Service, were “are the brine plumes (plumes of brine-contaminated groundwater) from abandoned oil wells affecting wetlands on Waterfowl Production Areas and National Wildlife Refuges?” and “are newer wells related to Bakken and Three Forks development different than the older, abandoned wells (in terms of potential for affecting aquatic resources)?” Of special concern were the wetland habitats of the ecologically important Prairie Pothole Region, which overlays a part of the Williston Basin and is recognized for the production of a majority of North America’s migratory waterfowl. On the basis of the concerns raised by on-the-ground land managers, as well as findings from previous research, a comprehensive study was developed with the following goals: summarize existing information pertaining to oil and gas production and aquatic resources in the Williston Basin; assess brine plume migration from new and previously studied sites in the Prairie Pothole Region; perform a regional, spatial evaluation of oil and gas production activities and aquatic resources; assess the potential for brine contamination to wetlands and streams; and hold a decision analysis workshop with key stakeholders to discuss issues pertaining to oil and gas production and environmental effects and to identify information gaps and research needs. This report represents an initial, multidisciplinary evaluation of measured and potential environmental effects associated with oil and gas production in the Williston Basin and Prairie Pothole Region. Throughout this report there are reviews of current knowledge, and discussions relating to data gaps and research needs. On the basis of the information presented, future research needs include: regional geophysical and water-quality assessments to establish baselines for current conditions and estimate the extent of previous brine contamination, investigations into the direct effects of brine to biotic communities, and evaluations to identify the most effective techniques to mitigate brine contamination.

Montana, North Dakota↗
USGS2019

Estimating density and detection of bobcats in fragmented Midwestern landscapes using spatial capture-recapture data from camera traps

Camera-trapping data analyzed with spatially explicit capture–recapture (SCR) models can provide a rigorous method for estimating density of small populations of elusive carnivore species. We sought to develop and evaluate the efficacy of SCR models for estimating density of a presumed low-density bobcat ( Lynx rufus ) population in fragmented landscapes of west-central Illinois, USA. We analyzed camera-trapping data from 49 camera stations in a 1,458-km 2 area deployed over a 77-day period from 1 February to 18 April 2017. Mean operational time of cameras was 52 days (range = 32–67 days). We captured 23 uniquely identifiable bobcats 113 times and recaptured these same individuals 90 times; 15 of 23 (65.2%) individuals were recaptured at ≥2 camera traps. Total number of bobcat capture events was 139, of which 26 (18.7%) were discarded from analyses because of poor image quality or capture of only a part of an animal in photographs. Of 113 capture events used in analyses, 106 (93.8%) and 7 (6.2%) were classified as positive and tentative identifications, respectively; agreement on tentative identifications of bobcats was high (71.4%) among 3 observers. We photographed bobcats at 36 of 49 (73.5%) camera stations, of which 34 stations were used in analyses. We estimated bobcat density at 1.40 individuals (range = 1.00–2.02)/100 km 2 . Our modeled bobcat density estimates are considerably below previously reported densities (30.5 individuals/100 km 2 ) within the state, and among the lowest yet recorded for the species. Nevertheless, use of remote cameras and SCR models was a viable technique for reliably estimating bobcat density across west-central Illinois. Our research establishes ecological benchmarks for understanding potential effects of colonization, habitat fragmentation, and exploitation on future assessments of bobcat density using standardized methodologies that can be compared directly over time. Further application of SCR models that quantify specific costs of animal movements (i.e., least-cost path models) while accounting for landscape connectivity has great utility and relevance for conservation and management of bobcat populations across fragmented Midwestern landscapes.

Illinois↗