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Tetlin National Wildlife Refuge land cover mapping project users guide

Title III of the Alaska National Interest Lands Conservation Act of 1980 (ANILCA, 1980) established the Tetlin National Wildlife Refuge (TNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological, historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities… ; d) present the potential requirements for access with respect to the refuge… ; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described... (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner data (MSS) and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail, obtained from the analysis of Landsat data, is adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska

Heavy-Mineral Placer Potential Map of the U.S. Continental Shelf, Western and Northern Gulf of Mexico

The establishment of the Exclusive Economic Zone (EEZ) in 1983 by Presidential Proclamation opened for natural resource exploration a vast offshore frontier area contiguous to the United States and its territories. The EEZ extends from the seaward limit of state waters (3 nautical mi from shore) to 200 nautical mi offshore, and it includes the continental shelves. Within the context of the EEZ natural resource assessment effort, the purpose of this study is to delineate, on a regional basis, the potential for heavy-mineral placers on the U.S. Continental Shelf in the western and northern Gulf of Mexico from the United States-Mexico border to the Alabama-Florida state line. This map is intended to serve as a general guide for placer exploration. It shows favorable sea-floor areas for placer occurrence in water depths ranging from 0 to 100 fathoms (600 ft). The map can be used as a guide for focusing costly exploratory efforts, such as coring operations and geophysical surveys. The potential economic value of heavy-mineral placer concentrations on the U.S. Continental Shelf is a function of both geologic and economic variables. Geologic variables include the composition and concentration of the heavy-mineral assemblages and their environment of deposition. Economic variables include the current world market price of extracted metals, as well as the cost of mining, processing, and marketing the metals. These economic factors, in turn, are tempered by the nation1s socio-political climate, which determines its need for specific mineral resources at any given time.

Miscellaneous Field Studies Map

Effect of groundwater withdrawals, river stage, and precipitation on water-table elevations in the Iowa River alluvial aquifer near Tama, Iowa, 2017–20

The Sac and Fox Tribe of the Mississippi in Iowa is the only federally recognized Tribe in the State of Iowa and is commonly known as the Meskwaki Nation. The Tribe owns more than 8,100 acres, referred to as the “Meskwaki Settlement.” The Meskwaki Settlement uses a well field that withdraws water from the Iowa River alluvial aquifer (IRAA) to supply drinking water to members of the Tribe. Increased severity and timing of flooding and drought conditions, coupled with water-quality concerns in the Iowa River, have prompted the Meskwaki Nation to start identifying tools to provide a better understanding of how extreme climate events (changes in streamflow, flood frequency, and magnitude and persistence of drought conditions), increasing water-supply demands, and groundwater storage depletion will affect water availability in the IRAA. From June 2017 through September 2020, the U.S. Geological Survey, in cooperation with the Meskwaki Nation, collected continuous and discrete groundwater level data from 11 wells in a U.S. Geological Survey monitoring-well network. Groundwater level data collected at these wells were assessed with daily precipitation data and compared to changes in stream level elevations and daily groundwater withdrawals to determine how these changes affect groundwater-table elevations. Results from this study could be used to guide the development of a conceptual model for groundwater flow and a groundwater flow model for the IRAA to quantify and forecast the effect of groundwater withdrawals, Iowa River streamflow, and local precipitation on the water table in the IRAA.

Iowa

Means of recognizing source beds

Eight characteristics of sediments are considered as possible means of recognizing source beds: 1, quantity of organic matter in the sediments; 2, reducing power, which is a measure of ability of the sediments to reduce chromic acid; 3, color of sediments; 4, volatility of sediments; 5, degree of volatility, which is a measure of the volatility with respect to the organic content; 6, ratio of carbon to nitrogen in the sediments; 7, oxidation factor, which is an index of the state of oxidation of the sediments, and is the ratio of the carbon content to' the reducing power; and, 8, the nitrogen-reduction ratio, which is the ratio of the nitrogen content to the reducing power. Several thousand determinations of these characteristics have been made and averaged from more than 800 lithologic units from many areas in the California, Rocky Mountain, Mid Continent, East Texas, and Gulf Coast oil regions. The thickness of these units ranges from 50 ft. to 500 ft. Each of them has been classified according to its probable richness in source material of petroleum. Nearness to producing zones has been the basis of classification, as it seems more reasonable to assume that oil in general accumulates near where it is generated than to assume that it ordinarily accumulates far from where it is made. Three classes were made: 1, lithologic units within 250 ft. stratigraphically above or below an oil zone and less than 2 miles from an oil field; 2, (a) units within 500 ft. above or below an oil zone and within 15 miles of an oil field (excluding, of course, those that belong to the first class) and (b) units within 250 ft. stratigraphically of a horizon and more than 15 miles distant from an oil field, provided the unit is located within a region in which the horizon is generally productive of oil or yields significant quantity of oily substances when extracted with ether; and, 3, all other beds, viz., those more than 500 ft. above or below an oil horizon or more than 15 miles distant from an oil field and beds at greater distance if they are within 250 ft. of horizons that generally contain oil in the area. These three classes are designated in this report as " productive," " questionably productive," and " barren." " Productive " units naturally may contain spine beds that are poor in source material, and " barren " units may contain beds that are rich in source material; but, on the whole, the " productive " units-because of their nearness to oil zones-are more likely' to be richer in mother substances of petroleum than are the " barren " units. Each of the eight characteristics was averaged for each of the three classes of productivity, for each of the five oil areas: California, Rocky Mountains, Mid Continent, East Texas, and Gulf Coast. The average organic content of the "productive" and " barren " units was found to be approximately the same in each region studied, from which it is inferred that the quantity of organic matter in a sediment probably is not a reliable guide of the ability of the sediments to generate oil. The average reducing power of the " productive " beds is slightly greater than that of the "barren"; but the difference is so slight that the reducing power, also, probably is not a satisfactory guide to source beds. The color of, the sediments, in general, becomes darker as the organic content of the sediments increases; and, as the organic content seems to be a poor index of source beds, color presumably is not a serviceable means of recognizing source beds. The volatility of the " productive " beds is greater than that of the " barren " units in each of the five regions, but it differs so much from region to region that it cannot be used as an index of source beds unless the general volatility of the sediments in the region under consideration is known. For example, the average volatility of the " barren " units in California and the Rocky Mountain regions is greater than that of the " productive " units in the Mid Continent, East Texas, and Gulf Coast areas. The degree of volatility differs less from region to region than does the volatility, and in general exhibits a relationship to productivity equally as good as the volatility. The average ratio of carbon to nitrogen in each of the three regions from which data are available-Rocky Mountains, Mid Continent, and East Texas-is higher for " productive " beds than for " barren " units, but the ratio differs somewhat from one region to another. The oxidation factor of the " productive " units is approximately the same as that of the " barren " units in the Rocky Mountain region and in the East Texas region, but not in the Mid Continent region-where the oxidation factor of the " productive " units is definitely lower than that of the " barren " units. The average nitrogen-reduction ratio of the " productive " units is decidedly greater than that of the " barren " units in each of the five regions studied; and it, therefore, is the most reliable of the guides studied. Relatively few " productive " units have nitrogen-reduction ratios greater than 7.0, and relatively few " barren " units have ratios of less than 4.5. A considerable number of both " productive " and " barren " units have ratios ranging between 4.5 and 7.0, but even between these limits the productive units tend to be more commonly associated with low ratios than are the " barren " units. Four of these eight characteristics-volatility, degree of volatility, carbon-nitrogen ratio, and nitrogen-reduction ratio-therefore, give promise of being useful means of recognizing source beds; and one of them, the nitrogen-reduction ratio, is particularly encouraging. Additional studies of these four characteristics, and especially of the nitrogen-reduction ratio, are highly desirable.

Conference Paper

Can non-invasive methods replace radiocollar-based winter counts in a 50-year wolf study? Lessons learned from a three-winter trial

Context: Monitoring low-density, elusive predators such as grey wolves ( Canis lupus ) has often been undertaken via live-capture and radio-collaring. Recent advances in non-invasive methods suggest live-captures may not be necessary for adequate monitoring. Further, non-invasive methods are considered best practice when possible. Aims: I evaluated whether a suite of non-invasive methods could replace aerial radiotelemetry to census resident pack wolves. Methods: I employed aerial snow-tracking, ground snow-tracking, camera-trapping, non-invasive genetic surveys, and community-scientist reports during three winters (2019–2021) in north-eastern Minnesota, USA to census pack wolves in a 2060 km 2 area. I attempted to enumerate individual pack sizes as has been historically undertaken to compile the census. Traditional aerial radiotelemetry methods were also conducted for comparison. Key results: Ground snow-tracking and camera-trapping provided the most similar information to radiotelemetry for determining pack counts and territory information, and, in some cases, documented higher pack counts than those obtained by aerial radiotelemetry. Radiotelemetry was the best method for determining pack territories, but was limited to radioed packs. A staggered application of both approaches resulted in increased precision and additional pack-level information without greatly increasing overall field effort. Non-invasive methods allowed trapping for radio-collaring to be reduced to every other year (a 50% reduction), but depending on trapping success, survival of animals, and radio-collar battery life, might even be reduced to every third year. Conclusions: In this 3-year trial, non-invasive methods were not sufficient to completely replace radio-collaring. Nevertheless, non-invasive methods allowed for a 50% reduction in trapping, increased the annual wolf-count precision, and increased community involvement. Anticipated technological improvements in non-invasive methods should reduce some issues encountered – but others will likely persist, in part, because of the fundamental nature of non-invasive methods. Implications: Less reliance on captures, enhanced pack information, and increased public involvement are all successful outcomes of this 3-year trial of non-invasive methods for monitoring wolf populations. Non-invasive methods continue to broaden and improve technologically, and information from trials such as this will help guide others as they increasingly implement non-invasive methods as partial or complete replacements for traditional capture-based methods.

Wildlife Research

Quantifying eruptive and background seismicity, deformation, degassing, and thermal emissions at volcanoes in the United States during 1978–2020

An important aspect of volcanic hazard assessment is determination of the level and character of background activity at a volcano so that deviations from background (called unrest) can be identified. Here, we compile the instrumentally recorded eruptive and noneruptive activity for 161 US volcanoes between 1978 and 2020. We combine monitoring data from four techniques: seismicity, ground deformation, degassing, and thermal emissions. To previous work, we add the first comprehensive survey of US volcanoes using medium-spatial resolution satellite thermal observations, newly available field surveys of degassing, and new compilations of seismic and deformation data. We report previously undocumented thermal activity at 30 volcanoes using data from the spaceborne ASTER sensor during 2000–2020. To facilitate comparison of activity levels for all US volcanoes, we assign a numerical classification of the Activity Intensity Level for each monitoring technique, with the highest ranking corresponding to an eruption. There are 96 US volcanoes (59%) with at least one type of detected activity, but this represents a lower bound: For example, there are 12 volcanoes where degassing has been observed but has not yet been quantified. We identify dozens of volcanoes where volcanic activity is only measured by satellite (45% of all thermal observations), and other volcanoes where only ground-based sensors have detected activity (e.g., all seismic and 62% of measured degassing observations). Our compilation provides a baseline against which future measurements can be compared, demonstrates the need for both ground-based and remote observations, and serves as a guide for prioritizing future monitoring efforts.

Journal of Geophysical Research

Anatomy of an eradication effort: Removing Hawaii's illegally introduced axis deer

In February 2011, a rancher in the rural southern part of Hawaii Island reported a large mammal on her land. Her call mobilized several agencies led by the Big Island Invasive Species Committee (BIISC), a partnership to prevent, detect, and control the establishment and spread of invasive species, to sit up and take notice. Agency biologists installed camera traps to identify the animal, and a few months later verified the diagnostic field marks of a chervid with spots. The animal in questions was a chital , or axis deer ( Axis axis )--a species native to tropical and subtropical India. Although the deer are abundant on the islands of Molokai, Lānai, and Maui, officials knew they weren't capable of swimming across the notoriously treacherous ʻAlenuihāhā channel, and subsequently suspected human intervention. Soon after the rancher's report, the U.S. Fish and Wildlife Service launched an investigation, which revealed that in December 2009, a helicopter pilot and rancher from Maui had covertly transported four deer in exchange for about a dozen European mouflon sheep ( Ovis gmelini musimon ) (Tummons 2011a, b)--a species also valued for trophies and meat. Because neither species was established in the wild on either of the islands, in June 2012, state lawmakers responded by specifically banning "the international possession or interisland transportation or release of wild or feral deer" (Honolulu Star-Advertiser 2012). The two individuals were prosecuted under the Lacey Act for transporting wildlife between islands with the intent to guide hunting for out-of-state residents (Stephens Media 2012), while the individual who provided the mouflon was sentenced to community service. Further, the helicopter pilot agreed to provide 500 hours of flight time to locate and eradicate the Hawaii Island deer population in restitution.

Hawai'i

Using structured decision making to guide habitat restoration for butterflies: A case study of Oregon silverspots

When making decisions about how to restore habitat for at-risk species, land managers must balance multiple competing objectives in the face of uncertainty about the impacts of management actions on at-risk populations. The Oregon silverspot ( Speyeria = Argynnis zerene hippolyta ) is a federally threatened butterfly, and uncertainty exists about the effects of proposed management. We used structured decision making (SDM) to guide restoration for Oregon silverspots. Managers identified persistence as their primary objective and further identified effects of herbicides as a key uncertainty. We developed a model of population dynamics incorporating management actions and parameterized the model based on experiments with a surrogate subspecies, the Zerene silverspot ( S. z. zerene ). Herbicide application may directly harm Oregon silverspots by increasing larval mortality, while indirectly benefiting silverspots by reducing the competition faced by their host plant. In this system, potential herbicide treatments include grass-specific fluazifop-P-butyl or forb-specific clopyralid applied with Agri-Dex ® or Nu-Film ® -IR adjuvants. We found that Oregon silverspot population growth rate is greatest with clopyralid and fluazifop-P-butyl when combined with Nu-Film ® -IR than other alternatives (including no treatment) considering only direct effects or in combination with indirect effects. An adaptive management program would benefit Oregon silverspots by promoting exploration of management alternatives while allowing managers to act quickly to arrest steep declines. Uncertainty remains regarding how well our results will generalize in field conditions.

Journal of Insect Conservation

Comparison of radio-telemetric home range analysis and acoustic detection for Little Brown Bat habitat evaluation

With dramatic declines of bat populations due to mortality caused by Pseudogymnoascus destructans (White-nose Syndrome), assessing habitat preferences of bats in the northeastern US is now critical to guide the development of regional conservation efforts. In the summer of 2012, we conducted fixed-station simultaneous telemetry to determine nocturnal spatial use and fixed-kernel home-range estimates of available habitat of a Myotis lucifugus (Le Conte) (Little Brown Bat) maternity colony in an artificial bat house. In summers of 2011 and 2012, we also deployed a 52-ha grid of 4 × 4 Anabat acoustic detectors over five 6–8-day sampling periods in various riparian and non-riparian environments in close proximity to the same bat house. The mean telemetry home range of 143 ha for bats ( n = 7) completely overlapped the acoustic grid. Rankings of habitats from telemetry data for these 7 bats and 5 additional bats not included in home-range calculations but added for habitat-use measures ( n = 13) revealed a higher proportional use of forested riparian habitats than other types at the landscape scale. Pair-wise comparisons of habitats indicated that bats were found significantly closer to forested riparian habitats and forests than to open water, developed areas, fields, shrublands, or wetland habitats at the landscape scale. Acoustic sampling showed that naïve occupancy was 0.8 and 0.6 and mean nightly detection probabilities were 0.23 and 0.08 at riparian and non-riparian sites, respectively. Our findings suggest that Little Brown Bats select forested riparian and forested habitats for foraging at the landscape scale but may be most easily detected acoustically at riparian sites when a simple occupancy determination for an area is required.

Northeastern Naturalist

Sample design effects in landscape genetics

An important research gap in landscape genetics is the impact of different field sampling designs on the ability to detect the effects of landscape pattern on gene flow. We evaluated how five different sampling regimes (random, linear, systematic, cluster, and single study site) affected the probability of correctly identifying the generating landscape process of population structure. Sampling regimes were chosen to represent a suite of designs common in field studies. We used genetic data generated from a spatially-explicit, individual-based program and simulated gene flow in a continuous population across a landscape with gradual spatial changes in resistance to movement. Additionally, we evaluated the sampling regimes using realistic and obtainable number of loci (10 and 20), number of alleles per locus (5 and 10), number of individuals sampled (10-300), and generational time after the landscape was introduced (20 and 400). For a simulated continuously distributed species, we found that random, linear, and systematic sampling regimes performed well with high sample sizes (>200), levels of polymorphism (10 alleles per locus), and number of molecular markers (20). The cluster and single study site sampling regimes were not able to correctly identify the generating process under any conditions and thus, are not advisable strategies for scenarios similar to our simulations. Our research emphasizes the importance of sampling data at ecologically appropriate spatial and temporal scales and suggests careful consideration for sampling near landscape components that are likely to most influence the genetic structure of the species. In addition, simulating sampling designs a priori could help guide filed data collection efforts.

Conservation Genetics

The imager for Mars Pathfinder experiment

The imager for Mars Pathfinder (IMP), a stereoscopic, multispectral camera, is described in terms of its capabilities for studying the Martian environment. The camera's two eyes, separated by 15.0 cm, provide the camera with range‐finding ability. Each eye illuminates half of a single CCD detector with a field of view of 14.4×14.0° and has 12 selectable filters. The ƒ/18 optics have a large depth of field, and no focussing mechanism is required; a mechanical shutter is avoided by using the frame transfer capability of the 512×512 CCD. The resolving power of the camera, 0.98 mrad/pixel, is approximately the same as the Viking Lander cameras; however, the signal‐to‐noise ratio for IMP greatly exceeds Viking, approaching 350. This feature along with the stable calibration of the filters between 440 and 1000 nm distinguishes IMP from Viking. Specially designed targets are positioned on the Lander; they provide information on the magnetic properties of wind‐blown dust, measure the wind vectors, and provide radiometric standard reflectors for calibration. Also, eight low‐transmission filters are included for imaging the Sun directly at multiple wavelengths, giving IMP the ability to measure dust opacity and potentially the water vapor content. Several experiments beyond the requisite color panorama are described in detail: contour mapping of the local terrain, multispectral imaging of the surrounding rock and soil to study local mineralogy, viewing of three wind socks, measuring atmospheric opacity and water vapor content, and estimating the magnetic properties of wind‐blown dust. This paper is intended to serve as a guide to understanding the scientific integrity of the IMP data that will be returned from Mars starting on July 4, 1997.

Journal of Geophysical Research E: Planets

Review of a model to assess stranding of juvenile salmon by ship wakes along the Lower Columbia River, Oregon and Washington

Long period wake waves from deep draft vessels have been shown to strand small fish, particularly juvenile Chinook salmon Oncorhynchus tschawytcha, in the lower Columbia River (LCR). The U.S. Army Corps of Engineers is responsible for maintaining the shipping channel in the LCR and recently conducted dredging operations to deepen the shipping channel from an authorized depth of 40 feet(ft) to an authorized depth of 43 ft (in areas where rapid shoaling was expected, dredging operations were used to increase the channel depth to 48 ft). A model was developed to estimate stranding probabilities for juvenile salmon under the 40- and 43-ft channel scenarios, to determine if channel deepening was going to affect wake stranding (Assessment of potential stranding of juvenile salmon by ship wakes along the Lower Columbia River under scenarios of ship traffic and channel depth: Report prepared for the Portland District U.S. Army Corps of Engineers, Portland, Oregon). The U.S. Army Corps of Engineers funded the U.S. Geological Survey to review this model. A total of 30 review questions were provided to guide the review process, and these questions are addressed in this report. In general, we determined that the analyses by Pearson (2011) were appropriate given the data available. We did identify two areas where additional information could have been provided: (1) a more thorough description of model diagnostics and model selection would have been useful for the reader to better understand the model framework; and (2) model uncertainty should have been explicitly described and reported in the document. Stranding probability estimates between the 40- and 43-ft channel depths were minimally different under most of the scenarios that were examined by Pearson (2011), and a discussion of the effects of uncertainty given these minimal differences would have been useful. Ultimately, however, a stochastic (or simulation) model would provide the best opportunity to illustrate uncertainty within a given set of model predictions, but such an approach would require a substantial amount of additional data collection. Several review questions focused on the accuracy and precision of the model estimates, but we were unable to address these questions because of the limited data that currently exists regarding wake stranding in the LCR. Additional field studies will be required to validate findings from Pearson (2011), if concerns regarding accuracy and precision remain a priority. Although the Pearson (2011) model provided a useful examination of stranding under pre-construction and post-construction conditions, future research will be required to better understand the effects of wake stranding on juvenile salmonids throughout the entire LCR. If additional information on wake stranding is desired in the future, the following topics may be of interest: (1) spatial examination of wake stranding throughout the entire LCR; (2) additional evaluation of juvenile salmonid behavior and population dynamics; (3) assessing and integrating predicted changes in ship development; and (4) assessing and integrating predicted changes in climate on environmental factors known to cause stranding.

Oregon;Washington

User's guide to the wetland creation/restoration data base, version 2

Wetland creation or restoration projects are frequently proposed as mitigation for unavoidable wetland losses, as components of wetland enhancement programs, and as tools to accomplish specific objectives such as waterfowl production or flood control. There is considerable controversy concerning the effectiveness of such projects as well as the most appropriate and efficient techniques to employ. The importance of the resource and the long time scales involved in fully evaluating a creation or restoration effort make it imperative to consider existing information as fully as possible in the development and evaluation of wetland creation or restoration proposals. To aid in the evaluation of wetland/creation efforts, the U.s. Fish and Wildlife Service (FWS), National Ecology Research Center, has developed the Wetland Creation/Restoration (WCR) Data Base. The data base is a highly indexed or keyworded bibliography of wetland creation or restoration articles. ("Articles" refers to any type of publication that deals specifically with wetland creation/restoration projects or studies.) The scope of the articles is international, although most of them are concerned with projects conducted in the United States. Information coded for each article includes author; citation; type of wetland and its location in terms of state, ecoregion, and FWS region; type of study undertaken; objectives in creating or restoring the wetland; actions performed to realize those objectives; length of time encompassed by the study; evaluation of results and responses to the wetland creation/restoration actions; and a listing of plant species significant to the project. A brief annotation summarizes the article and includes any significant additional information that may not be adequately reflected in the above described fields. Many of these articles describe only one or two components of a total wetland restoration effort. Planning a project that is designed to restore a wetland system (including at least some of its functions) is similar to constructing a picture from a number of puzzle pieces--missing pieces represent data gaps or information that is not available. Articles range from specific case studies, to overviews of restoration methods and techniques, to planning restoration projects and assessing programmatic and administrative backgrounds and interactions. In this data base, the term "restoration" is applied loosely to include rehabilitation of wetlands. It may refer to a number of situations or actions including, but not limited to: 1. breaching dikes or plugging drains; 2. water pollution clean-up; 3. conversion of eutrophic conditions; 4. wastewater treatment; 5. recolonization of previously disturbed or denuded areas; 6. amelioration of adverse conditions (erosion, wave, or wind action); 7. soil treatment --mulching, fertilization; 8. rerouting streams --may include construction of meander patterns; 9. monitoring natural vegetation; or 0. excluding grazers (geese, cattle) and monitoring results. This report describes the format and content of Version 2 of the WCR data base. Version 2 differs from the previous version described in SchnellerMcDonald et al. (1988): several fields have been dropped and condensed and new records have been added. Version 2 includes all records distributed with the earlier version and its updates. We recommend you replace any previous version with Version 2.

Book

Geospatial Technology Applications and Infrastructure in the Biological Resources Division

Executive Summary -- Automated spatial processing technology such as geographic information systems (GIS), telemetry, and satellite-based remote sensing are some of the more recent developments in the long history of geographic inquiry. For millennia, humankind has endeavored to map the Earth's surface and identify spatial relationships. But the precision with which we can locate geographic features has increased exponentially with satellite positioning systems. Remote sensing, GIS, thematic mapping, telemetry, and satellite positioning systems such as the Global Positioning System (GPS) are tools that greatly enhance the quality and rapidity of analysis of biological resources. These technologies allow researchers, planners, and managers to more quickly and accurately determine appropriate strategies and actions. Researchers and managers can view information from new and varying perspectives using GIS and remote sensing, and GPS receivers allow the researcher or manager to identify the exact location of interest. These geospatial technologies support the mission of the U.S. Geological Survey (USGS) Biological Resources Division (BRD) and the Strategic Science Plan (BRD 1996) by providing a cost-effective and efficient method for collection, analysis, and display of information. The BRD mission is 'to work with others to provide the scientific understanding and technologies needed to support the sound management and conservation of our Nation's biological resources.' A major responsibility of the BRD is to develop and employ advanced technologies needed to synthesize, analyze, and disseminate biological and ecological information. As the Strategic Science Plan (BRD 1996) states, 'fulfilling this mission depends on effectively balancing the immediate need for information to guide management of biological resources with the need for technical assistance and long-range, strategic information to understand and predict emerging patterns and trends in ecological systems.' Information sharing plays a key role in nearly everything BRD does. The Strategic Science Plan discusses the need to (1) develop tools and standards for information transfer, (2) disseminate information, and (3) facilitate effective use of information. This effort centers around the National Biological Information Infrastructure (NBII) and the National Spatial Data Infrastructure (NSDI), components of the National Information Infrastructure. The NBII and NSDI are distributed electronic networks of biological and geographical data and information, as well as tools to help users around the world easily find and retrieve the biological and geographical data and information they need. The BRD is responsible for developing scientifically and statistically reliable methods and protocols to assess the status and trends of the Nation's biological resources. Scientists also conduct important inventory and monitoring studies to maintain baseline information on these same resources. Research on those species for which the Department of the Interior (DOI) has trust responsibilities (including endangered species and migratory species) involves laboratory and field studies of individual animals and the environments in which they live. Researchboth tactical and strategicis conducted at the BRD's 17 science centers and 81 field stations, 54 Cooperative Fish and Wildlife Research Units in 40 states, and at 11 former Cooperative Park Study Units. Studies encompass fish, birds, mammals, and plants, as well as their ecosystems and the surrounding landscape. Biological Resources Division researchers use a variety of scientific tools in their endeavors to understand the causes of biological and ecological trends. Research results are used by managers to predict environmental changes and to help them take appropriate measures to manage resources effectively. The BRD Geospatial Technology Program facilitates the collection, analysis, and dissemination of data and informat

Information and Technology Report

A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales

Predictions of habitat suitability for invasive plant species can guide risk assessments at regional and national scales and inform early detection and rapid-response strategies at local scales. We present a general approach to invasive species modeling and mapping that meets objectives at multiple scales. Our methodology is designed to balance trade-offs between developing highly customized models for few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable set for each species before developing habitat suitability models. To ensure efficiency, we used largely automated modeling approaches and human input only at key junctures. We explore and present uncertainty by using two alternative sources of background samples, including five statistical algorithms, and constructing model ensembles. We demonstrate the use and efficiency of the Software for Assisted Habitat Modeling [SAHM 2.1.2], a package in VisTrails, which performs the majority of the modeling analyses. Our workflow includes solicitation of expert feedback on model outputs such as spatial prediction results and variable response curves, and iterative improvement based on new data availability and directed field validation of initial model results. We highlight the utility of the models for decision-making at regional and local scales with case studies of two plant species that invade natural areas: fountain grass ( Pennisetum setaceum ) and goutweed ( Aegopodium podagraria ). By balancing model automation with human intervention, we can efficiently provide land managers with mapped predicted distributions for multiple invasive species to inform decisions across spatial scales.

PLoS ONE

Description of CRIB, the GIPSY retrieval mechanism, and the interface to the General Electric MARK III Service : CRIB, the mineral resources data bank of the U.S. Geological Survey--guide for public users, 1977

The U.S. Geological Survey's Computerized Resources Information Bank (CRIB) is being made available for public use through the computer facilities of the University of Oklahoma and the General Electric Company, U.S.A. The use of General Electric's worldwide information-services network provides access to the CRIB file to a worldwide clientele. This manual, which consists of two chapters, is intended as a guide to users who wish to interrogate the file. Chapter A contains a description of the CRIB file, information on the use of the GIPSY retrieval system, and a description of the General Electric MARK III Service. Chapter B contains a description of the individual data items in the CRIB record as well as code lists. CRIB consists of a set of variable-length records on the metallic and nonmetallic mineral resources of the United States and other countries. At present, 31,645 records in the master file are being made available. The record contains information on mineral deposits and mineral commodities. Some topics covered are: deposit name, location, commodity information, description of deposit, geology, production, reserves, potential resources, and references. The data are processed by the GIPSY program, which maintains the data file and builds, updates, searches, and prints the records using simple yet versatile command statements. Searching and selecting records is accomplished by specifying the presence, absence, or content of any element of information in the record; these specifications can be logically linked to prepare sophisticated search strategies. Output is available in the form of the complete record, a listing of selected parts of the record, or fixed-field tabulations. The General Electric MARK III Service is a computerized information services network operating internationally by land lines, satellites, and undersea cables. The service is available by local telephone to 500 cities in North America, Western Europe, Australia, Southeast Asia, Japan, and Saudi Arabia. An interface called the 'foreground driver' is used to link the GIPSY program to the General Electric system.

Circular

Cape Romain partnership for coastal protection

This final report summarizes activities, outcomes, and lessons learned from a 3-year project titled “Climate Change Adaptation for Coastal National Wildlife Refuges” with the Cape Romain National Wildlife Refuge (NWR) and local partners in the surrounding South Carolina Lowcountry. The Lowcountry is classified as the 10-county area encompassing the coastal plain of South Carolina (this report specifically focuses on Berkeley, Charleston, and Georgetown Counties). The goals of this work, sponsored by the U.S. Geological Survey’s Southeast Climate Adaptation Science Center (SECASC), were to foster active engagement with stakeholders; to develop a comprehensive definition of adaptation problems faced by agencies, organizations, and individuals near the Cape Romain NWR that accounts for global change, local values, knowledge and perceptions; and to encourage social learning and building of effective networks and trust across South Carolina Lowcountry organizations and individuals. Although project scoping began at the scale of the Atlantic seaboard, by engaging with NWRs from Massachusetts to Florida, participating refuge personnel eventually selected the Cape Romain NWR to serve as a case study for testing our goals. The Cape Romain Partnership for Coastal Conservation was established to address global change impacts at a regional level and includes representation from Federal and State resource agencies, local conservation nongovernmental organizations, and organizations representing underserved community interests. Research topics, originating from discussions with Cape Romain Partnership for Coastal Conservation members, focused on quantifying key drivers of change including localized sea-level rise (SLR) predictions, estimates of coastal hurricane inundation as amplified by SLR, and urban growth trends and forecasts. These key drivers provided a foundation to engage stakeholders in planning exercises to begin a process of collective understanding and collaborative decision making. The goal of this process was to develop collective strategies of adaptation to enhance community and ecosystem resilience in the South Carolina Lowcountry. South Carolina’s Lowcountry is experiencing rapid environmental and social transformation because of SLR rates approaching twice the global average, chronic tidal flooding and catastrophic storm surges, erosion and loss of habitats that provide essential services to wildlife and humans, and increasing social polarization fueled by aggressive low-density urban growth and other forms of land conversion. To support characterizations of plausible future scenarios, we used available or, in some cases, developed new models to project future conditions of key environmental and social-economic drivers. Because of the imprecision of mean global SLR projections, the SECASC commissioned a climatological study to account for local conditions and multiple representative concentration pathways to project a tailored distribution of future sea levels. These projections were matched to SLR scenarios provided by existing models to anticipate the range of future coastal habitat changes in the South Carolina Lowcountry. SLR scenarios were also incorporated into existing storm-surge models, which do not account for alternate baseline sea levels, to project the local effects of future hurricanes. To evaluate the extent and effects of population growth and urban expansion, we relied on an existing urban-growth model to map the spatial distribution of land-conversion probabilities, the total area of which is predicted to increase twofold to threefold over the next 60 years. In addition to this simplified model, an econometric model is in development to account for nonlinear feedback dynamics in land value, land use, and ecosystem service production. Although not yet completed, the goals of this model are to produce more-detailed projections of growth dynamics and to allow predictions of development patterns resulting from alternate land-use planning policies and incentives. Collaborative planning for an uncertain future requires more than providing decision makers with information on future physical and ecological conditions; developing effective and consensual strategies must also integrate sociological values, multiple cultural perspectives, and an understanding of human behavior. To support broad stakeholder engagement in integrative approaches to adaptation planning, emphasis was placed on the importance of considering differences in how individuals perceive their environment and create meaning. Because cultural frameworks form the basis for perceptions and, ultimately, the behaviors of individuals and institutions, we describe a model of human behavior and how it can be used to understand the effect of cultural complexity and variation in perception on choices, behavioral change, and long-term maintenance of behaviors. We consider a model commonly used in the field of behavioral health that accommodates variation in human perception when describing stages of behavior and the dynamics of behavioral change. Tailoring communication and engagement activities to targeted stakeholders is likely to benefit from increased understanding of behavioral change processes. The complex nature of this problem limited the usefulness of a traditional decision-analytic approach, we explored alternative methods for engagement, collaborative learning and decision making. Recognizing that project partners and Lowcountry stakeholders may be at different stages of preparedness and interest level for modifying behavior as a function of global change, we facilitated a scenario-planning exercise to familiarize partners with this well-established approach for communicating the opportunities and threats arising under alternative, plausible futures. We developed narratives for four alternative South Carolina Lowcountry scenarios to be used in later strategic planning that focus on quantitative trends for three primary drivers with high impact and high uncertainty: manifestations of climate change, social-political shifts at a global level, and forces of local value and power structures. This scenario-planning exercise underscored the complex relation between the temporospatial scale of the production of ecological goods and services and the institutional scale at which they are managed. We then guided the partners through an assessment of the relevant strengths and weaknesses of the Cape Romain Partnership for Coastal Protection, using the threats and opportunities characterized by each scenario to understand how the partnership might respond when attempting to meet conservation and societal objectives. The partnership identified key strengths including partnership experience, outreach and technical capacities, a substantial conservation land base, and high social cohesion in the South Carolina Lowcountry. Limited communication expertise, institutional inertia, and insufficient staffing and funding were recognized as important weaknesses across the partnership. By examining and scoring combinations of internal strengths and weaknesses and external threats and opportunities, the partnership developed sets of prioritized strategies to consider in the context of a given scenario. Although we had insufficient time to examine all scenarios in detail, the intent was to identify a portfolio of strategic actions to address threats and opportunities represented in multiple plausible futures. Top-ranking strategies encompassed a range of actions that focused on strengthening the conservation community and communicating the benefits of nature (that is, ecosystem services) to leveraging partnerships to expand land protection. This report also details the methods and preliminary results of several models developed or applied in support of this project. Two parcel-selection algorithms were used to evaluate anticipated habitat changes and patterns of urban growth to guide decisions on optimal conservation reserve design to protect habitat communities. One approach used a widely available planning software (MARXAN) to maximize conservation benefits near the Cape Romain NWR, whereas the other approach was a novel application of economic theory to account for uncertainty in future conditions and for the risks of unanticipated habitat loss. This latter model applies modern portfolio theory to estimate the risk of investing in any portfolio of land parcels (that is, candidate “reserves”) under climate-change uncertainty by quantifying the variation and spatial correlation of conservation benefits derived from each portfolio. We expanded the range of actions beyond simply whether or not to invest in a set of land parcels, an approach commonly used in spatial conservation planning, to also include consideration of divestment from currently protected lands. Such refinements allow for better accounting of system dynamics and can evaluate the benefits of flexible conservation tools such as rolling easements. Model results were conditional on a decision maker’s risk tolerance but highlighted general strategies of land conservation to increase future habitat representation beyond what is expected under the current protected land base. We built models that may help inform coastal planning by estimating salinity dynamics and the performance of oyster reef restoration efforts to predict the combined effects of global change and management of freshwater flows on coastal habitats and the processes that contribute to their resilience. These models can support restoration decisions by evaluating the expected benefits of site locations for shoreline protection and fisheries production. Lastly, we developed a spatially explicit economic model that predicts feedback dynamics among land value, land-use change, and effects on ecosystem service provision to explore zoning policies and incentives on urban growth and ecosystem services. We summarize these efforts with insights and considerations for the Cape Romain Partnership for Coastal Protection to continue to engage stakeholders in effective adaptation planning. First, notions of place attachment (referred to as sense of place), and the role of culture in social discourse are increasingly being used to understand the complex interactions between society and the environment and how societies respond and adapt to climate change. Sense of place was a unifying theme whenever the future of the South Carolina Lowcountry was discussed. The contribution of the South Carolina Lowcountry’s environmental wealth, rich cultural heritage, and quality of life to sense of place has important implications for how adaptation planning might best be pursued. More community-based governance of the commons (in other words, natural and cultural resources held in common), in which broad stakeholder participation and power sharing are key elements, is considered important. This devolution of governance is characterized by polycentric institutions and self-organizing social networks that promote a local culture of knowledge sharing, problem solving, and learning. These so-called bridging organizations (or individuals) often provide the leadership necessary to bring together potentially disparate Government agencies and institutions, private organizations, and individuals in a collective process of problem solving. Our observations also suggest that the conservation community in the South Carolina Lowcountry views its activities as integral to the broader governance of social-ecological systems, in which responses to the forces of global change are mediated through culture, economics, and politics. Rather than directly competing with other interests, the South Carolina Lowcountry conservation community seems to embrace an interpretation of conservation in which the fundamental objective is the quality of human life rather than environmental protection. Fundamental to the types of governance reforms described above is the notion of coproduction, in which experts and users collaborate to develop a shared body of knowledge. In this approach, scientists work with stakeholders to help frame questions, design research, and collect and analyze data. Such sustained collaborations are increasingly believed to be an effective way to produce useable (or actionable) science. The emphasis on social learning, leveraging strong social networks, coordinating and deliberating among diverse stakeholders, and applying principles of adaptive management is an essential contribution to adaptive capacity. The diverse and robust set of scientific approaches, methods to help stakeholders collaborate in effective and goal-driven planning processes, and decision tools resulting from this project hopefully will assist Cape Romain NWR and its partners prepare for climatic, ecological, and social changes over the coming decades.

South Carolina

Monitoring plan for vegetation responses to elk management in Rocky Mountain National Park

Rocky Mountain National Park (RMNP) in north-central Colorado supports numerous species of wildlife, including several large ungulate species among which Rocky Mountain elk (Cervus elaphus) are the most abundant. Elk are native to RMNP but were extirpated from the area by the late 1800s. They were reintroduced to the area in 1913-1914, and the elk herd grew to the point that it was actively managed from 1944 until 1968. In 1969, the active control of elk was discontinued and since then the herd has increased to a high point ranging from 2,800 to 3,500 between 1997 and 2001. In recent years, there has been growing concern over the condition of vegetation in the park and conflicts between elk and humans, both inside and outside the park. In response to these concerns, RMNP implemented an Elk and Vegetation Management Plan (EVMP) in 2009 to guide management actions in the park over a 20-year time period with the goal of reducing the impacts of elk on vegetation and restoring the natural range of variability in the elk population and affected plant and animal communities. The EVMP outlines the desired future condition for three vegetation communities where the majority of elk herbivory impacts are being observed: aspen, montane riparian willow, and upland herbaceous communities. The EVMP incorporates the principle of adaptive management whereby the effectiveness of management actions is assessed and adjusted as needed to successfully achieve objectives. Determination of whether vegetation objectives are being achieved requires monitoring and evaluation of target vegetation communities. The current report describes the design and implementation of a vegetation-monitoring program to help RMNP managers assess the effectiveness of their management actions and determine when and where to alter actions to achieve the EVMP's vegetation objectives. This monitoring plan details the process of selecting variables to be monitored, overall sampling design and structure, site selection, data collection methods, and statistical analyses to be used to conduct this monitoring program in conjunction with the EVMP. We report the baseline conditions observed at the time of the establishment of monitoring sites. We include detailed field protocols for site establishment and data collection, as well as timetables for sampling, so that RMNP staff will be able to continue monitoring the sites established during this implementation stage, and continue to add new sites when necessary, as the execution of the EVMP proceeds over the next 20 years.

Colorado