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At least 559 records · Page 31Linked to original sources
USGS2021

Emerging perspectives on resource tracking and animal movement ecology

Resource tracking, where animals increase energy gain by moving to track phenological variation in resources across space, is emerging as a fundamental attribute of animal movement ecology. However, a theoretical framework to understand when and where resource tracking should occur, and how resource tracking should lead to emergent ecological patterns, is lacking. We present a framework that unites concepts from optimal foraging theory and landscape ecology, which can be used to generate and test predictions on how resource dynamics shape animal movement across taxa, systems, and scales. Consideration of the interplay between animal movement and resource dynamics not only advances ecological understanding but can also guide biodiversity conservation in an era of global change.

Trends in Ecology & Evolution↗
USGS2021

A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species

Resource selection functions (RSFs) have been widely applied to animal tracking data to examine relative habitat selection and to help guide management and conservation strategies. While readily used in terrestrial ecology, RSFs have yet to be extensively used within marine systems. As acoustic telemetry continues to be a pervasive approach within marine environments, incorporation of RSFs can provide new insights to help prioritize habitat protection and restoration to meet conservation goals. To overcome statistical hurdles and achieve high prediction accuracy, machine learning algorithms could be paired with RSFs to predict relative habitat selection for a species within and even outside the monitoring range of acoustic receiver arrays, making this a valuable tool for marine ecologists and resource managers. Here, we apply RSFs using machine learning to an acoustic telemetry dataset of four shark species to explore and predict species-specific habitat selection within a marine protected area. In addition, we also apply this RSF-machine learning approach to investigate predator-prey relationships by comparing and averaging tiger shark relative selection values with the relative selection values derived for eight potential prey-species. We provide methodological considerations along with a framework and flexible approach to apply RSFs with machine learning algorithms to acoustic telemetry data and suggest marine ecologists and resource managers consider adopting such tools to help guide both conservation and management strategies.

Buck Island Reef National Monument, St Croix↗
USGS2016

Considering transient population dynamics in the conservation of slow life-history species: An application to the sandhill crane

The importance of transient dynamics of structured populations is increasingly recognized in ecology, yet these implications are not largely considered in conservation practices. We investigate transient and long-term population dynamics to demonstrate the process and utility of incorporating transient dynamics into conservation research and to better understand the population management of slow life-history species; these species can be theoretically highly sensitive to short- and long-term transient effects. We are specifically interested in the effects of anthropogenic removal of individuals from populations, such as caused by harvest, poaching, translocation, or incidental take. We use the sandhill crane ( Grus canadensis ) as an exemplar species; it is long-lived, has low reproduction, late maturity, and multiple populations are subject to sport harvest. We found sandhill cranes to have extremely high potential, but low likelihood for transient dynamics, even when the population is being harvested. The typically low population growth rate of slow life-history species appears to buffer against many perturbations causing large transient effects. Transient dynamics will dominate population trajectories of these species when stage structures are highly biased towards the younger and non-reproducing individuals, a situation that may be rare in established populations of long-lived animals. However, short-term transient population growth can be highly sensitive to vital rates that are relatively insensitive under equilibrium, suggesting that stage structure should be known if perturbation analysis is used to identify effective conservation strategies. For populations of slow life-history species that are not prone to large perturbations to their most productive individuals, population growth may be approximated by equilibrium dynamics.

Biological Conservation↗
USGS2019

Characteristics of feeding sites of California Condors (Gymnogyps californianus) in the human-dominated landscape of Southern California

Wildlife conservation is often improved by understanding the movement ecology of species and adapting management strategies to dynamic conditions associated with movement. Despite a remarkable recovery over the past 30 year, the establishment of self-sustaining populations of California Condors (Gymnogyps californianus) has been challenging in the human-dominated landscapes of southern California. Among these challenges are those imposed by condor ground-foraging behavior that exposes them to environmental contamination. These include lead poisoning from the ingestion of spent ammunition and micro-trash ingestion and, during takeoff and landing, collisions with human structures. We tracked 28 California Condors for 24 months with patagially mounted GPS telemetry units to investigate the characteristics of ground sites condors visited and to identify spatiotemporal trends that might aid in conservation of this critically endangered species. Ground sites occurred on a wide variety of land cover types, primarily on steep slopes, and those more frequently used were associated with open cover. Condors concentrated their visits to ground sites around a 3 h period near midday, and usage increased from winter to late summer. Our study is the first to use remotely sensed telemetry data to describe fine-scale ecological correlates of condor ground-foraging ecology and therefore has important relevance for ongoing conservation and management strategies for this species. The descriptions of ground sites we provide can be used to target conservation or management actions.

California↗
USGS2026

At the edge of change: Native Phragmites persistence and nonnative arrival along the dam-regulated Colorado River

Premise The southwestern United States is at the forefront of nonnative Phragmites australis subsp. australis expansion. Native Phragmites australis subsp. americanus , likely in decline in North America, is ecologically and culturally important and of conservation interest. In the greater Grand Canyon region, the Glen Canyon Dam led to loss of habitat upstream and increases in Phragmites downstream. Recent increases correspond with changes to dam operations and the arrival of nonnative Phragmites . Determining the native status of Phragmites stands along the Colorado River and around Lake Powell can inform complex management choices and restoration planning. Methods Phragmites subspecies at 83 locations from southern Utah through northern Arizona, United States were genetically tested using real-time PCR. Genetic diversity and structure were assessed using microsatellite loci for 13 native Phragmites stands. Morphological traits of southwestern native Phragmites were compared to those of nonnative Phragmites . Results Nonnative Phragmites was identified at four of the 83 locations. Native Phragmites in the study area is genetically diverse with little regional genetic structure, but substantial genetic differentiation among sites. Southwestern native Phragmites is morphologically variable, but characteristics can be used together to distinguish it from nonnative Phragmites . Conclusions The greater Grand Canyon and Glen Canyon regions support a large, genetically diverse native Phragmites population, which is potentially threatened by nonnative Phragmites and changes to river management. Determining conditions that would lead to nonnative Phragmites invasion of desert wetlands will facilitate discussions about the risks and benefits of Phragmites management in these unique ecosystems.

Arizona, Nevada, Utah↗
USGS2021

A greener future for the Galapagos: Forecasting ecosystem productivity by finding climate analogs in time

Forecasting ecosystem response to climate change is critical for guiding policymaking but challenging due to: complicated relationships between microclimates and regional climates; species’ responses that are driven by extremes rather than averages; the multifaceted nature of species’ interactions; and the lack of historical analogs to future climates. Given these challenges, even model systems such as the Galapagos Islands, a world-famous biodiversity hotspot and World Heritage Site, lack clear forecasts for future environmental change. Here, we developed a novel nonparametric method for simulating the ecosystem futures based on observed vegetation productivity (NDVI) during analogous weather observed historically. Using satellite images taken from the past to piece together a simulated future, we projected that productivity of terrestrial vegetation of the Galapagos will increase over the next century by approximately one standard deviation archipelago-wide, with largest increases during the wet season (January to June) and in the arid zones. Such greening would impact a variety of ecological and evolutionary processes, species of conservation concern, and agricultural practices. Our straightforward approach can be applied to many other regions, particularly those with rapid ecosystem responses to stochastic inter-annual climatic fluctuations that provide appropriate climate analogs for forecasting.

Galápagos Islands↗
USGS2010

Age and sex specific timing, frequency, and spatial distribution of horseshoe crab spawning in Delaware Bay: Insights from a large-scale radio telemetry array

To study horseshoe crab Limulus polyphemus spawning behavior and migration over a large-spatial extent (>100 km), we arrayed fixed station radio receivers throughout Delaware Bay and deployed radio transmitters and archival tags on adult horseshoe crabs prior to their spawning season. We tagged and released 160 females and 60 males in 2004 and 217 females in 2005. The array covered approximately 140 km of shoreline. Recapture rates were >70% with multi-year recaptures. We categorized adult age by carapace wear. Older females tended to spawn earlier in the season and more frequently than young females, but those tendencies were more apparent in 2004 when spawning overall occurred earlier than in 2005 when spawning was delayed possibly due to decreased water temperatures. Timing of initial spawning within a year was correlated with water temperature. After adjusting for day of first spring tide, the day of first spawning was 4 days earlier for every 1 degree (̊C) rise in mean daily water temperature in May. Seventy nine % of spawning occurred during nighttime high tides. Fifty five % of spawning occurred within 3 d of a spring tide, which was slightly higher than the 47% expected if spawning was uniformly distributed regardless of tidal cycle. Within the same spawning season, males and females were observed spawning or intertidally resting at more than one beach separated by >5 km. Between years, most (77%) did not return to spawn at the same beach. Probability of stranding was strongly age dependent for males and females with older adults experiencing higher stranding rates. Horseshoe crabs staging in the shallow waters east of the channel spawned exclusively along the eastern (NJ) shoreline, but those staging west of the channel spawned throughout the bay. Overall, several insights emerged from the use of radio telemetry, which advances our understanding of horseshoe crab ecology and will be useful in conserving the Delaware Bay horseshoe crab population and habitats.

Delaware, New Jersey↗
USGS2022

Economical defence of resources structures territorial space use in a cooperative carnivore

Ecologists have long sought to understand space use and mechanisms underlying patterns observed in nature. We developed an optimality landscape and mechanistic territory model to understand mechanisms driving space use and compared model predictions to empirical reality. We demonstrate our approach using grey wolves ( Canis lupus ). In the model, simulated animals selected territories to economically acquire resources by selecting patches with greatest value, accounting for benefits, costs and trade-offs of defending and using space on the optimality landscape. Our approach successfully predicted and explained first- and second-order space use of wolves, including the population's distribution, territories of individual packs, and influences of prey density, competitor density, human-caused mortality risk and seasonality. It accomplished this using simple behavioural rules and limited data to inform the optimality landscape. Results contribute evidence that economical territory selection is a mechanistic bridge between space use and animal distribution on the landscape. This approach and resulting gains in knowledge enable predicting effects of a wide range of environmental conditions, contributing to both basic ecological understanding of natural systems and conservation. We expect this approach will demonstrate applicability across diverse habitats and species, and that its foundation can help continue to advance understanding of spatial behaviour.

Montana↗
USGS2010

Vegetation response to early holocene warming as an analog for current and future changes: Special section

Temperatures in southwestern North America are projected to increase 3.5-4 ??C over the next 60-90 years. This will precipitate ecological shifts as the ranges of species change in response to new climates. During this shift, rapid-colonizing species should increase, whereas slow-colonizing species will at first decrease, but eventually become reestablished in their new range. This successional process has been estimated to require from 100 to over 300 years in small areas, under a stable climate, with a nearby seed source. How much longer will it require on a continental scale, under a changing climate, without a nearby seed source? I considered this question through an examination of the response of fossil plant assemblages from the Grand Canyon, Arizona, to the most recent rapid warming of similar magnitude that occurred at the start of the Holocene, 11,700 years ago. At that time, temperatures in southwestern North America increased about 4 ??C over less than a century. Grand Canyon plant species responded at different rates to this warming climate. Early-successional species rapidly increased, whereas late-successional species decreased. This shift persisted throughout the next 2700 years. I found two earlier, less-extreme species shifts following rapid warming events around 14,700 and 16,800 years ago. Late-successional species predominated only after 4000 years or more of relatively stable temperature. These results suggest the potential magnitude, duration, and nature of future ecological changes and have implications for conservation plans, especially those incorporating equilibrium assumptions or reconstituting past conditions. When these concepts are extended to include the most rapid early-successional colonizers, they imply that the recent increases in invasive exotics may be only the most noticeable part of a new resurgence of early-successional vegetation. Additionally, my results challenge the reliability of models of future vegetation and carbon balance that project conditions on the basis of assumptions of equilibrium within only a century. ?? 2009 Society for Conservation Biology.

Conservation Biology↗
USGS2020

Space use and relative habitat selection for immature green turtles within a Caribbean marine protected area

Background A better understanding of sea turtle spatial ecology is critical for the continued conservation of imperiled sea turtles and their habitats. For resource managers to develop the most effective conservation strategies, it is especially important to examine how turtles use and select for habitats within their developmental foraging grounds. Here, we examine the space use and relative habitat selection of immature green turtles (Chelonia mydas) using acoustic telemetry within the marine protected area, Buck Island Reef National Monument (BIRNM), St. Croix, United States Virgin Islands. Results Space use by turtles was concentrated on the southern side of Buck Island, but also extended to the northeast and northwest areas of the island, as indicated by minimum convex polygons (MCPs) and 99%, 95%, and 50% kernel density estimations (KDEs). On average space use for all categories was<3 km2 with mean KDE area overlap ranging from 41.9 to 67.7%. Cumulative monthly MCPs and their proportions to full MCPs began to stabilize 3 to 6 detection months after release, respectively. Resource selection functions (RSFs) were implemented using a generalized linear mixed effects model with turtle ID as the random effect. After model selection, the accuracy of the top model was 77.3% and showed relative habitat selection values were highest at shallow depths, for areas in close proximity to seagrass, and in reef zones for both day and night, and within lagoon zones at night. The top model was also extended to predict across BIRNM at both day and night. Conclusion More traditional acoustic telemetry analyses in combination with RSFs provide novel insights into animal space use and relative resource selection. Here, we demonstrated immature green turtles within the BIRNM have small, specific home ranges and core use areas with temporally varying relative selection strengths across habitat types. We conclude the BIRNM marine protected area is providing sufficient protection for immature green turtles, however, habitat protection could be focused in both areas of high space use and in locations where high relative selection values were determined. Ultimately, the methodologies and results presented here may help to design strategies to expand habitat protection for immature green turtles across their greater distribution.

St. Croix↗
USGS2020

Concealment of juvenile bull trout in response to temperature, light, and substrate: Implications for detection

Bull trout ( Salvelinus confluentus) are challenging to detect as a result of the species cryptic behavior and coloration, relatively low densities in complex habitats, and affinity for cold, high clarity, low conductivity waters. Bull trout are also closely associated with the stream bed, frequently conceal in substrate, and this concealment behavior is poorly understood. Consequently, population assessments are problematic and biologists and managers often lack quantitative information to accurately describe bull trout distributions, estimate abundance, and assess status and trends; particularly for stream-dwelling populations. During controlled laboratory trials, we recorded concealment, resting, and swimming behavior of juvenile wild bull trout in response to: (1) constant and fluctuating water temperature, (2) presence or absence of light, and (3) substrate size. Light level had the strongest influence on wild fish concealment and more fish concealed as light levels increased from darkness to daylight. Wild fish were 14.5 times less likely to conceal in constant darkness and 4.1 times more likely to conceal in 12 h light x 12 h darkness compared to constant light. Wild fish were 6.2 times less likely to conceal in small (26–51 mm) substrate compared to larger (52–102 mm) substrate. As water temperature increased, fewer wild fish concealed. Knowledge of wild bull trout concealment will improve field sampling protocols and increase detection efficiencies. These data also enhance knowledge of bull trout niche requirements which illuminates ecological differences among species and informs conservation and restoration efforts.

PLoS ONE↗
USGS2019

Multiscale habitat factors explain variability in stream fish occurrence in the Ozark Highlands ecoregion, USA

The dynamic, multiscale nature of stream systems makes it challenging to establish basic ecological principles to guide stream fish conservation and management. For example, finer-scale instream habitat is often constrained by coarser-scale characteristics driving observed species distributions. Additionally, instream environmental variability can result in patchy species distributions within general upstream–downstream occurrence patterns (i.e., variation around a common theme). Groundwater contribution, an often-overlooked habitat characteristic in warmwater systems, has numerous influences on the instream environment and can play a role in fish habitat-use patterns and assemblage structure. We identified multiscale instream habitat characteristics associated with the occurrence probability of 20 Ozark Highland stream fishes. Fishes were surveyed using tow-barge electrofishing in 76 channel unit complexes (i.e., riffle-to-riffle habitat sequences) nested in 20 reaches of northwest Oklahoma and southwest Missouri. We used a multiscale, multispecies generalized linear mixed model to identify relationships between fish occurrence and both channel unit complex- and reach-scale variables. Stream fishes were more likely to occur in larger or deeper channel unit complexes. Fish occurrence was also associated with different levels of reach-scale groundwater contribution, bankfull width-to-depth ratio, and percent instream cover. Ten fishes, typically associated with warmer water temperatures, had lower occurrence probabilities in reaches with higher groundwater contribution, whereas Banded Sculpin Cottus carolinae and Creek Chub Semotilus atromaculatus occurrence probabilities were higher. There was no relationship between occurrence probabilities and instream cover for 11 fishes. The occurrence probabilities in relation to varying amounts of instream cover for the other nine stream fishes was dependent on bankfull width-to-depth ratio, where the direction and magnitude of the relationships varied among stream fishes. The variation in occurrence relationships can be attributed to thermal preferences, environmental interactions, and the use of multiple habitat types. Our findings demonstrate the multiscale nature of fish occurrence relationships and how conservation and management may benefit from considering this complexity when developing holistic instream habitat enhancement strategies.

Missouri, Oklahoma↗
USGS2024

Bay Miwok evening primrose: A new subspecies of Oenothera deltoides (Onagraceae) endemic to California

California contains exceptional biodiversity in geography and plant life, including numerous endemic species, some of which are cryptic. The Oenothera deltoides Torr. & Frém. species complex represents a prime example of cryptic diversity. Here, we recognize a new subspecies of Oenothera deltoides , O. deltoides subsp. julpunensis S.F.Jones, subsp. nov., that is a local endemic of windblown sand deposits on the eastern Antioch Dunes sand sheet in the San Francisco Bay-Delta region of California, USA. With the goal of providing clarity to managers of listed species and better understanding of California's diverse flora, we addressed the puzzle of O. deltoides in the region by combining range-wide field surveys with modern genomic tools. We describe the proposed subspecies, its ecology and distribution, and discuss its conservation. As a somewhat cryptic local endemic with small population size and disappearing habitat, the proposed subspecies would benefit from conservation and management to persist as a member of the California flora.

California↗
USGS2021

A river of change—The Rio Grande in the Big Bend region

The Big Bend region is located within the heart of the Chihuahan Desert of North America. Within this region, the Rio Grande, referred to as the Rio Bravo in Mexico, is the international border between the United States and Mexico. The area known as the Big Bend is named after the large northerly bend that the river makes before flowing southeast to the Gulf of Mexico. This region is environmentally protected by both countries. Although large binational conservation efforts exist, the physical and ecological characteristics of the river have been substantially altered. Changes in Rio Grande hydrology (the seasonality, magnitude, duration, and variability in streamflow) have resulted in the widespread physical transformation of the river, resulting in the loss of important habitat for native and endangered fish and increased flood risk. U.S. Geological Survey (USGS) scientists, in cooperation with many other government agencies, universities, and non-governmental organizations (NGOs), are working to better understand these changes to inform management of the Rio Grande.

Texas↗
USGS2021

Using high resolution satellite and telemetry data to track flooded habitats, their use by waterfowl, and evaluate effects of drought on waterfowl and shorebird bioenergetics in California

Wetland managers in the Central Valley of California, a dynamic hydrological landscape, require information regarding the amount and location of existing wetland habitat to make decisions on how to best use water resources to support multiple wildlife objectives, particularly during drought. Scientists from the U.S. Geological Survey Western Ecological Research Center (WERC), Point Blue Conservation Science (Point Blue), and the U.S. Fish and Wildlife Service (USFWS) partnered to learn how wetland and flooded agricultural habitats used by waterfowl and shorebirds change during the non-breeding season (July–April) particularly during drought. During extreme drought conditions, the ability to provide sufficient water for wildlife often depends on the timing of water deliveries to managed wetlands and winter-flooded crop fields and decisions on whether to fallow croplands. Waterfowl and shorebirds could be particularly affected by these decisions because they typically rest and feed in flooded habitats. Poor habitat conditions resulting from spatially or temporally suboptimal water deliveries (that is, mismatch between waterfowl habitat needs and timing and location of flooded habitats) could reduce waterfowl hunting opportunities and body condition. Point Blue scientists developed a system for near real-time tracking of habitats used by waterfowl, shorebirds, and some other wetland-dependent “waterbirds” ( www.pointblue.org/watertracker ) and to assess the impacts of drought on habitat availability and on waterfowl and shorebird bioenergetics. The WERC researchers linked these data with near real-time tracking (telemetry) data of duck locations throughout the Valley. The team used these two datasets to relate duck locations to open-water characteristics and to learn how waterfowl use habitats under spatially and temporally changing conditions during drought and non-drought periods. We found that recent extreme drought (2013–15) significantly changed the timing and magnitude of flooding and consequently reduced the availability of habitats used by waterfowl and shorebirds more than other recent historic droughts 2000–11. Drought reduced irrigations of moist soil seed plants and thus there was lower food energy available for waterfowl. Analyses using bioenergetics models indicated that, overall, extreme drought increased food energy deficits (total number of deficit days) for shorebirds and waterfowl. Our analysis indicated a strong direct relationship between duck locations and classified habitat derived from open-water data during the wintering period (October–March). This result helps confirm the application of dynamic water data to identify flooded areas that provide waterfowl habitat. Presence of open water at a 1-hectare resolution can be used effectively to identify flooded landscape areas available as habitat for ducks. Our discoveries from evaluating use of space by ducks also indicated that nighttime feeding locations of ducks were concentrated nearby primary roosts and that foraging distances could depend on hydrologic dynamics of location (Suisun Marsh versus California excluding Suisun Marsh) and time of season (early, middle, late). Other results indicated that some areas on the California landscape with extremely reliable water supplies could receive consistent use by ducks year after year (in essence, almost drought proof). The Water Tracker is set up to automatically track wetland habitat and food availability each year and is making these data available to water and wetland managers. Results from this research are a significant step toward understanding how waterfowl and shorebird habitats can be optimally managed on the landscape to support desired populations of these migratory birds during extreme drought.

California↗
USGS2025

Land-based nutrient flux to a fringing reef: Insights from Ofu Island, American Samoa

Submarine groundwater discharge (SGD) is a critical driver of nutrient transport in coral reef ecosystems, shaping water quality, primary productivity, and overall reef health. This study quantifies SGD fluxes and associated nutrient dynamics in two reef flat pools within the Ofu Unit of the National Park of American Samoa: Papaloloa and Fatuana. A multi-method approach integrating unoccupied aerial system-based thermal infrared (UAS-TIR) surveys, radon-based SGD measurements, multichannel electrical resistivity tomography (ERT), and discrete water sampling was used to assess SGD rates and nutrient contributions. UAS-TIR imagery revealed cooler sea surface temperatures in both pools, indicative of SGD, with the higher fluxes observed in Papaloloa. Radon measurements revealed a strong inverse correlation between SGD rates and tidal stage, with a more immediate SGD response at Papaloloa due to its highly permeable calcareous sand and gravel substrate. In contrast, a 2–3-hour lag in SGD response at Fatuana suggests discharge from a more inland aquifer that has lower diffusivity. Nutrient concentrations correlated with temperature and salinity, confirming SGD as the dominant nutrient transport mechanism, whereas isotopic analyses indicated inputs from both groundwater and potential anthropogenic sources. Despite lower SGD flux at Fatuana, higher algal cover suggests additional factors influencing algal proliferation, including substrate availability and hydrodynamic conditions. Excess nutrient inputs from SGD may contribute to algal overgrowth, which threatens Ofu’s thermally tolerant corals by increasing competition for space and light. These findings underscore the complexity of SGD-mediated nutrient dynamics in reef environments and emphasize the need for integrated hydrological and ecological assessments to support effective reef conservation and management strategies.

American Samoa, Ofu Island, Olosega Island↗
USGS2009

The decline of North American freshwater fishes

North America has a broad array of freshwater ecosystems because of the continent's complex geography and geological history. Within a multitude of habitats&mdash;that include streams, large rivers, natural lakes, springs, and wetlands&mdash;rich assemblages of fishes reside, representing diverse taxonomic groups with unique ecological requirements. They face an unprecedented conservation crisis. 1 In the last few decades, the proportion of inland fishes of North America, which are considered imperiled or extinct, increased from 20 to 40%. 2 Although extinctions have occurred, many species and populations are declining in range size and abundance. The fish biota of the continent as a whole remains diverse; however, we can take action to stem any further declines.

ActionBioscience↗
USGS2002

North Carolina's natural heritage program: A case for public-private cooperation

Voluntary conservation programs are an effective tool for recognizing and preserving the value of special places on private forestlands. We evaluate private landowner participation in the Natural Heritage Program of North Carolina, finding that landowners are more likely to enroll land with high ecological significance in this voluntary program. Voluntary conservation is less likely on lands that are remote from threats such as roads, that have higher value in other uses, and that are near lands already conserved by the public.

Journal of Forestry↗